View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4635-Insertion-10 (Length: 292)
Name: NF4635-Insertion-10
Description: NF4635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4635-Insertion-10 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 8 - 272
Target Start/End: Original strand, 41379239 - 41379503
Alignment:
| Q |
8 |
gtggacatggtcattatgatctcaagagtgcgggttaaaagattttgactttgattatggtgagtacaaaatcaaaagctttaggtattgatgtaatgca |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41379239 |
gtggacatggtcattatgatctcaagagtgcgggttaaaagattttgactttgattatggtgagtacaaaatcaaaagctttaggtattgatgtaatgca |
41379338 |
T |
|
| Q |
108 |
aaggtaagaatatgttaatgaacaaatcgatgtaatgcatatattgaaggtttcagattgtttaacgagtataaataaatatatatcttgattaattagt |
207 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41379339 |
aaggtaagaacatgttaatgaacaaatcgatgtaatgcatatattgaaggtttcagattgtttaacgagtataaataaatatatatcttgattaattagt |
41379438 |
T |
|
| Q |
208 |
atggatgaagatattatacattcgatattagaacgagtatgtgtgtattattatattattcacaa |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41379439 |
atggatgaagatattatacattcgatattagaacgagtatgtgtgtattattatattattcacaa |
41379503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University