View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4635-Insertion-5 (Length: 877)

Name: NF4635-Insertion-5
Description: NF4635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4635-Insertion-5
NF4635-Insertion-5
[»] chr4 (19 HSPs)
chr4 (443-868)||(55372020-55372434)
chr4 (8-419)||(55372457-55372864)
chr4 (444-505)||(24444017-24444078)
chr4 (462-504)||(28615331-28615373)
chr4 (444-486)||(30207620-30207662)
chr4 (444-485)||(24160545-24160586)
chr4 (459-503)||(11802528-11802572)
chr4 (452-504)||(29778782-29778834)
chr4 (443-487)||(49219117-49219161)
chr4 (443-502)||(21157746-21157805)
chr4 (444-487)||(42866047-42866090)
chr4 (443-486)||(49085967-49086010)
chr4 (443-486)||(55870390-55870433)
chr4 (443-505)||(927454-927516)
chr4 (449-487)||(9841050-9841088)
chr4 (443-501)||(23819067-23819125)
chr4 (450-487)||(11842200-11842237)
chr4 (452-501)||(28252217-28252266)
chr4 (447-504)||(36722700-36722757)
[»] chr8 (10 HSPs)
chr8 (443-500)||(10460581-10460638)
chr8 (444-505)||(35869816-35869877)
chr8 (443-499)||(6864495-6864551)
chr8 (443-487)||(29973059-29973103)
chr8 (443-502)||(28769372-28769431)
chr8 (450-504)||(27754389-27754443)
chr8 (458-502)||(31891884-31891928)
chr8 (452-487)||(9834837-9834872)
chr8 (443-502)||(11795070-11795129)
chr8 (450-487)||(24558838-24558875)
[»] chr3 (14 HSPs)
chr3 (444-500)||(47904098-47904154)
chr3 (443-501)||(43875626-43875684)
chr3 (452-502)||(14548754-14548804)
chr3 (443-501)||(27792850-27792908)
chr3 (446-503)||(20502100-20502157)
chr3 (444-485)||(43116478-43116519)
chr3 (443-488)||(48807686-48807731)
chr3 (443-487)||(24235731-24235775)
chr3 (452-504)||(33405198-33405250)
chr3 (450-505)||(37788845-37788899)
chr3 (452-487)||(41057025-41057060)
chr3 (443-477)||(28779334-28779368)
chr3 (443-502)||(33965522-33965583)
chr3 (443-500)||(28306136-28306193)
[»] chr2 (18 HSPs)
chr2 (641-736)||(8516122-8516217)
chr2 (452-502)||(6227738-6227788)
chr2 (443-504)||(5043591-5043652)
chr2 (451-504)||(39983328-39983381)
chr2 (443-487)||(11513876-11513920)
chr2 (452-504)||(15377752-15377804)
chr2 (443-487)||(17952749-17952793)
chr2 (443-502)||(10143150-10143209)
chr2 (443-502)||(40158696-40158755)
chr2 (450-504)||(43635132-43635186)
chr2 (443-504)||(6993755-6993816)
chr2 (463-500)||(13056136-13056173)
chr2 (443-504)||(13736324-13736385)
chr2 (452-501)||(15780064-15780113)
chr2 (443-484)||(33942128-33942169)
chr2 (443-504)||(36863656-36863717)
chr2 (446-487)||(37292395-37292436)
chr2 (451-504)||(43985034-43985087)
[»] chr6 (8 HSPs)
chr6 (452-501)||(30533776-30533825)
chr6 (446-501)||(1402977-1403032)
chr6 (443-483)||(2117381-2117421)
chr6 (450-501)||(24838777-24838828)
chr6 (446-501)||(31324437-31324492)
chr6 (444-482)||(10452413-10452451)
chr6 (452-497)||(4246397-4246442)
chr6 (452-485)||(7485118-7485151)
[»] chr1 (20 HSPs)
chr1 (443-504)||(4078180-4078241)
chr1 (443-491)||(10581121-10581169)
chr1 (443-502)||(16322827-16322886)
chr1 (444-499)||(47960660-47960715)
chr1 (443-498)||(48830113-48830168)
chr1 (443-501)||(5150915-5150973)
chr1 (445-487)||(12564922-12564964)
chr1 (443-501)||(29007750-29007808)
chr1 (455-504)||(5592716-5592765)
chr1 (452-501)||(25005831-25005880)
chr1 (444-501)||(42556665-42556722)
chr1 (443-496)||(45205046-45205099)
chr1 (443-487)||(8130414-8130458)
chr1 (443-487)||(25006082-25006126)
chr1 (443-486)||(28467356-28467399)
chr1 (443-497)||(27887156-27887210)
chr1 (443-504)||(45107600-45107664)
chr1 (443-504)||(7218105-7218166)
chr1 (443-488)||(15361691-15361736)
chr1 (443-500)||(17269228-17269285)
[»] chr7 (13 HSPs)
chr7 (443-499)||(24909642-24909698)
chr7 (443-502)||(24895334-24895393)
chr7 (446-488)||(25507330-25507372)
chr7 (458-504)||(46104598-46104644)
chr7 (443-504)||(17989054-17989115)
chr7 (446-483)||(25558243-25558280)
chr7 (446-483)||(25558441-25558478)
chr7 (443-504)||(30456481-30456542)
chr7 (443-502)||(27481327-27481386)
chr7 (443-485)||(9527140-9527182)
chr7 (443-504)||(1350273-1350334)
chr7 (452-505)||(18350737-18350790)
chr7 (452-501)||(46104646-46104695)
[»] chr5 (17 HSPs)
chr5 (444-487)||(15003562-15003605)
chr5 (443-502)||(18704069-18704128)
chr5 (452-502)||(37588393-37588443)
chr5 (452-504)||(2568645-2568697)
chr5 (443-487)||(34205217-34205261)
chr5 (443-499)||(36539724-36539780)
chr5 (444-504)||(41016158-41016218)
chr5 (452-502)||(37690669-37690720)
chr5 (452-490)||(19138764-19138802)
chr5 (450-504)||(34117567-34117621)
chr5 (452-502)||(37526232-37526282)
chr5 (443-485)||(39823171-39823213)
chr5 (447-488)||(15557294-15557335)
chr5 (453-502)||(29054896-29054945)
chr5 (445-502)||(32408625-32408682)
chr5 (447-504)||(34245706-34245763)
chr5 (452-501)||(39257421-39257470)
[»] scaffold0100 (1 HSPs)
scaffold0100 (453-502)||(42604-42653)


Alignment Details
Target: chr4 (Bit Score: 352; Significance: 0; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 443 - 868
Target Start/End: Complemental strand, 55372434 - 55372020
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaacttacgtacatgttataagttttttcaagtagtctcac 542  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||    
T  55372434 gtcaaactattatcatatgagctataagtagttttcataagctattatgaa-----------cttacgtacatgttataagttttttcaagtagtctcac 55372346  T
Q  543 taatatttataacaatagataaactcaaatatagcaatcaaaacatgttctataagtaagaagaggccccataattgtatgtatgtggttggtttgcatt 642  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  55372345 taatatttataacaatagataaactcaaatatagcaatcaaaacatggcttatgagtaagaagaggccccataattgtatgtatgtggttggtttgcatt 55372246  T
Q  643 tagaaaagcctgttctcattgctttgaaccccacatgttactggtgctttagctttcattttctttaagtaccaaatgccacctccaattccaagtgctc 742  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55372245 tagaaaagcctgttctcattgctttgaaccccacatgttactggtgctttagctttcattttctttaagtaccaaatgccacctccaattccaagtgctc 55372146  T
Q  743 caaaagctgaaatagcggtaactgtccctgcagccagaattccaaatccaacacacaaagcaaaaccacaaacataagcctaattttcaacttcaaaaac 842  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  55372145 caaaagctgaaatagcagtaactgtccctgcagccagaattccaaatccaacacacaaaacaaaaccacaaacataagcctaattttcaacttcaaaaac 55372046  T
Q  843 cctggctttgtgaatattaattacta 868  Q
    ||||||||||||||||||||||||||    
T  55372045 cctggctttgtgaatattaattacta 55372020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 8 - 419
Target Start/End: Complemental strand, 55372864 - 55372457
Alignment:
Q  8 attttataccatctggatatggaacttgtgcaccaaattatacacctgctcaatcttttgtggctgttccaggttatatggtacctgctataactctcaa 107  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55372864 attttataccatctggatatggaagttgtgcaccaaattatacacctgctcaatcttttgtggctgttccaggttatatggtacctgctataactctcaa 55372765  T
Q  108 tgcaggtccattgagttgttttgttgggaggtcatgttaatatagtgaagatatattaatgtatcacatatcacaaattcacagctaatgaaactgcttt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||    
T  55372764 tgcaggtccattgagttgttttgttgggaggtcatgttaatatagtgaagatatattaatgtatcacatatcacaagttcacatctaatgaaactgtttt 55372665  T
Q  208 gcagaaaattagctttctatcatttggcattttcaataggctattattttggataatgcattacaacagtg--nnnnnnnnncttctcaattacttgaga 305  Q
    | |||||||||||||| |||||||||||||||||||     ||||||||||||||||||||| ||||||||            |||||||||||||||||    
T  55372664 gtagaaaattagctttgtatcatttggcattttcaa-----tattattttggataatgcattgcaacagtgttttttttttctttctcaattacttgaga 55372570  T
Q  306 taaaatataatcaaaacataaagatgccaacaagtaatcatcagaaaaattgtgaagcaagtctatggcctgaccatccttggataatcaaataagtgtt 405  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55372569 taaaatataatc-aaacattaagatgccaacaagtaattatcagaaaaattgtgaagcaagtctatggcctgaccatccttggataatcaaataagtgtt 55372471  T
Q  406 tataataagctatt 419  Q
    ||||||||||||||    
T  55372470 tataataagctatt 55372457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 444 - 505
Target Start/End: Original strand, 24444017 - 24444078
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaac 505  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| || | |||| ||||||    
T  24444017 tcaaacaattttcatataagctataagttgttttcataagctattgtggatagctaatgaac 24444078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 462 - 504
Target Start/End: Original strand, 28615331 - 28615373
Alignment:
Q  462 agctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||||||| ||||||||||||||| ||||||||||||||||    
T  28615331 agctataagttgttttcataagctataatgaagagcttatgaa 28615373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 444 - 486
Target Start/End: Complemental strand, 30207662 - 30207620
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagcta 486  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  30207662 tcaaactgttttcatataagctataagttgttttcataagcta 30207620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 24160586 - 24160545
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagct 485  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  24160586 tcaaactattttcatgtaagctataagttgttttcataagct 24160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 459 - 503
Target Start/End: Original strand, 11802528 - 11802572
Alignment:
Q  459 ataagctataagtggttttcataagctattatgaagagcttatga 503  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||    
T  11802528 ataagctacaagttgttttcataagctattatggagagcttatga 11802572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 452 - 504
Target Start/End: Original strand, 29778782 - 29778834
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||||||||||| ||||| ||||||||||||||   |||||||||||||||    
T  29778782 ttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaa 29778834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 49219117 - 49219161
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctat 487  Q
    |||||| |||||||||||||||||||||| |||||||||| ||||    
T  49219117 gtcaaattattttcatataagctataagttgttttcataaactat 49219161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 21157746 - 21157805
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||||| ||||||| |||||||||||  ||||||||| |||||  |||||||||||||    
T  21157746 gtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatg 21157805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 42866047 - 42866090
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagctat 487  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctat 42866090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 486
Target Start/End: Original strand, 49085967 - 49086010
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagcta 486  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||    
T  49085967 gtcaaactattttcatacaagttataagttgttttcataagcta 49086010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 55870433 - 55870390
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagcta 486  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||    
T  55870433 gtcaaactgttttcacataagctataagttgttttcataagcta 55870390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 443 - 505
Target Start/End: Original strand, 927454 - 927516
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaac 505  Q
    |||||||| |||||||||||||||||| | |||| |||||||||| ||| | ||||| |||||    
T  927454 gtcaaactgttttcatataagctataacttgtttgcataagctatcatggaaagcttttgaac 927516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 449 - 487
Target Start/End: Original strand, 9841050 - 9841088
Alignment:
Q  449 ctattttcatataagctataagtggttttcataagctat 487  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  9841050 ctattttcatataagctataagatgttttcataagctat 9841088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 23819067 - 23819125
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    |||||||| |||||||||||| |||||   |||||||||||||||  ||||||||||||    
T  23819067 gtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagcttat 23819125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 487
Target Start/End: Original strand, 11842200 - 11842237
Alignment:
Q  450 tattttcatataagctataagtggttttcataagctat 487  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  11842200 tattttcatataagctataagttgttttcataaactat 11842237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 501
Target Start/End: Original strand, 28252217 - 28252266
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    ||||||||||||  |||||  ||||||||||||||| |||||||||||||    
T  28252217 ttttcatataagtaataaggagttttcataagctatcatgaagagcttat 28252266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 447 - 504
Target Start/End: Complemental strand, 36722757 - 36722700
Alignment:
Q  447 aactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||| |||||||||||| ||||||| ||||| ||||| |||  |||||||||||||||    
T  36722757 aactgttttcatataagttataagttgttttgataagttatcctgaagagcttatgaa 36722700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 9e-17; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 443 - 500
Target Start/End: Original strand, 10460581 - 10460638
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagctta 500  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  10460581 gtcaaactattttcatacaagctataagtggttttcataagctatcatgtagagctta 10460638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 444 - 505
Target Start/End: Original strand, 35869816 - 35869877
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaac 505  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| || | |||| ||||||    
T  35869816 tcaaacaattttcatataagctataagttgttttcataagctattgtggatagctaatgaac 35869877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 499
Target Start/End: Complemental strand, 6864551 - 6864495
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagctt 499  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||| || |||||||    
T  6864551 gtcaaactattttcatgtaagttataagttgttttcataagctattttggagagctt 6864495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 29973059 - 29973103
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctat 487  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||    
T  29973059 gtcaaactattttcacataagctataagttgttttcataagctat 29973103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 28769431 - 28769372
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||||||||||| |||||||||||||  |||||||||||||||| || |||| |||||    
T  28769431 gtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatg 28769372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 27754389 - 27754443
Alignment:
Q  450 tattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    ||||||||| | | ||||||||||||||||||||||||| || ||||||||||||    
T  27754389 tattttcatgttaactataagtggttttcataagctattttggagagcttatgaa 27754443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 458 - 502
Target Start/End: Original strand, 31891884 - 31891928
Alignment:
Q  458 tataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||||||||||| |||||||||||||||  |||||||||||||    
T  31891884 tataagctataagttgttttcataagctatattgaagagcttatg 31891928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 487
Target Start/End: Complemental strand, 9834872 - 9834837
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctat 487  Q
    |||||||||||||||||||| |||||||||||||||    
T  9834872 ttttcatataagctataagttgttttcataagctat 9834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 11795070 - 11795129
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||| ||| |||||||||||| ||||||  | ||||||||||||||||| ||||||||||    
T  11795070 gtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatg 11795129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 487
Target Start/End: Original strand, 24558838 - 24558875
Alignment:
Q  450 tattttcatataagctataagtggttttcataagctat 487  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  24558838 tattttcgtataagctataagttgttttcataagctat 24558875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 444 - 500
Target Start/End: Complemental strand, 47904154 - 47904098
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagctattatgaagagctta 500  Q
    |||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  47904154 tcaagctattttcatataatctataagtggttttcataagctatcgtgaagagctta 47904098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 43875626 - 43875684
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    |||||||| || ||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  43875626 gtcaaactgttctcatataagctataagttgttttcataagctatcatggagagcttat 43875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 502
Target Start/End: Complemental strand, 14548804 - 14548754
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||||||||||||||||| ||||||||||| |||| || ||||||||||    
T  14548804 ttttcatataagctataagttgttttcataagttattctggagagcttatg 14548754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 27792850 - 27792908
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    |||||||||||||||||||||||  |||| |||||||||| |||| ||| |||||||||    
T  27792850 gtcaaactattttcatataagctgcaagttgttttcataaactatcatgtagagcttat 27792908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 20502157 - 20502100
Alignment:
Q  446 aaactattttcatataagctataagtggttttcataagctattatgaagagcttatga 503  Q
    ||||| |||||||||| ||||||||  |||||||||||||||  ||||||||||||||    
T  20502157 aaactgttttcatatacgctataagctgttttcataagctatcctgaagagcttatga 20502100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 43116519 - 43116478
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagct 485  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  43116519 tcaaacaattttcatataagctataagtcgttttcataagct 43116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 443 - 488
Target Start/End: Original strand, 48807686 - 48807731
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctatt 488  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  48807686 gtcaaactattttcatagaagctataagttgttttcataagttatt 48807731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 24235775 - 24235731
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctat 487  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||    
T  24235775 gtcaaactatttgaatataagctataagttgttttcataagctat 24235731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 452 - 504
Target Start/End: Complemental strand, 33405250 - 33405198
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||||||||||||||||  |||||||||||||||  |||||| ||||||||    
T  33405250 ttttcatataagctataagctgttttcataagctatcttgaagaacttatgaa 33405198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 505
Target Start/End: Original strand, 37788845 - 37788899
Alignment:
Q  450 tattttcatataagctataagtggttttcataagctattatgaagagcttatgaac 505  Q
    ||||||| ||||| |||||||| |||||||||||||||| ||||||| ||||||||    
T  37788845 tattttcgtataatctataagttgttttcataagctatt-tgaagagtttatgaac 37788899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 487
Target Start/End: Original strand, 41057025 - 41057060
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctat 487  Q
    |||||||||||||||||||| |||||||||||||||    
T  41057025 ttttcatataagctataagttgttttcataagctat 41057060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 28779334 - 28779368
Alignment:
Q  443 gtcaaactattttcatataagctataagtggtttt 477  Q
    ||||||||||||||||||||||||||||| |||||    
T  28779334 gtcaaactattttcatataagctataagttgtttt 28779368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 33965583 - 33965522
Alignment:
Q  443 gtcaaactattttcatataa--gctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||||| |||||||||||  ||||||||  |||||||||||||||  |||||||||||||    
T  33965583 gtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagcttatg 33965522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 500
Target Start/End: Original strand, 28306136 - 28306193
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagctta 500  Q
    |||||||| |||||||||||| || |||| |||||||||||||||   ||||||||||    
T  28306136 gtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 28306193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 641 - 736
Target Start/End: Complemental strand, 8516217 - 8516122
Alignment:
Q  641 tttagaaaagcctgttctcattgctttgaaccccacatgttactggtgctttagctttcattttctttaagtaccaaatgccacctccaattccaa 736  Q
    ||||||| || || || |||||| ||||||| |||||||| ||||||||  ||||| ||| |||||| ||||||||||| ||| ||||||||||||    
T  8516217 tttagaatagtctattatcattggtttgaactccacatgtgactggtgcagtagctctcaatttcttcaagtaccaaataccagctccaattccaa 8516122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 502
Target Start/End: Original strand, 6227738 - 6227788
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||| |||||| ||||||||||||||||||||||||| || ||||||||||    
T  6227738 tttttatataaactataagtggttttcataagctattttggagagcttatg 6227788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 5043652 - 5043591
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||| ||| | |||| |||||    
T  5043652 gtcaaactgttttcatataagctagaagttgttttcataagctatcatggatagctaatgaa 5043591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 504
Target Start/End: Original strand, 39983328 - 39983381
Alignment:
Q  451 attttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    ||||||||||||||||||||| |||||||||||||||  || |||||| |||||    
T  39983328 attttcatataagctataagttgttttcataagctatcctggagagctaatgaa 39983381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 11513876 - 11513920
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctat 487  Q
    |||||| | |||||||||||||||||||| |||||||||||||||    
T  11513876 gtcaaattgttttcatataagctataagttgttttcataagctat 11513920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 452 - 504
Target Start/End: Original strand, 15377752 - 15377804
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||||||||| ||||||  |||||||||||||||| ||| |||||||||||    
T  15377752 ttttcatataagttataagctgttttcataagctattctgaggagcttatgaa 15377804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 17952793 - 17952749
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctat 487  Q
    |||||||||||||||||||||||| |||  |||||||||||||||    
T  17952793 gtcaaactattttcatataagctacaagatgttttcataagctat 17952749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 10143150 - 10143209
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||||| |||| |||||||||||||||  |||||||||||||| ||| |||| |||||    
T  10143150 gtcaaactgtttttatataagctataagtttttttcataagctatcatggagagtttatg 10143209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 40158696 - 40158755
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||||| ||||| ||||||| |||||| ||||||||||| |||| || ||||||||||    
T  40158696 gtcaaactgttttcgtataagcaataagttgttttcataagttattctggagagcttatg 40158755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 43635186 - 43635132
Alignment:
Q  450 tattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||| ||||| ||||||||| ||| ||||||||||| ||||| ||||||||||    
T  43635186 tatttttatatacgctataagttgttctcataagctatcatgaaaagcttatgaa 43635132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 6993816 - 6993755
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||| ||| ||||||||||||||| || |||||||||||||||  |  ||||||||||||    
T  6993816 gtcaaattatattcatataagctataggttgttttcataagctatgcttgagagcttatgaa 6993755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 463 - 500
Target Start/End: Original strand, 13056136 - 13056173
Alignment:
Q  463 gctataagtggttttcataagctattatgaagagctta 500  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  13056136 gctataagttgttttcataagctattatggagagctta 13056173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 13736385 - 13736324
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    ||||||||||||||| || |||||||||  |||||||||||||||  |  ||||||||||||    
T  13736385 gtcaaactattttcacatcagctataagctgttttcataagctatactagagagcttatgaa 13736324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 501
Target Start/End: Original strand, 15780064 - 15780113
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    ||||||||||| |||||||| |||||||||||||||  || |||||||||    
T  15780064 ttttcatataatctataagttgttttcataagctatcgtgcagagcttat 15780113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 484
Target Start/End: Original strand, 33942128 - 33942169
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagc 484  Q
    |||||||| ||||||| |||||||||||| ||||||||||||    
T  33942128 gtcaaactgttttcatgtaagctataagttgttttcataagc 33942169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 36863717 - 36863656
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    ||||||| ||||| ||||||| ||||| | |||||||||||||||  || ||||||||||||    
T  36863717 gtcaaacaatttttatataagttataaattgttttcataagctatcttggagagcttatgaa 36863656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 37292436 - 37292395
Alignment:
Q  446 aaactattttcatataagctataagtggttttcataagctat 487  Q
    |||||||||||||||||||||| ||| |||||| ||||||||    
T  37292436 aaactattttcatataagctattagttgttttcttaagctat 37292395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 504
Target Start/End: Complemental strand, 43985087 - 43985034
Alignment:
Q  451 attttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||| |||||  ||||||| |||||||||||||||  |||||||||||||||    
T  43985087 attttcgtataaattataagttgttttcataagctatcttgaagagcttatgaa 43985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000005; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 452 - 501
Target Start/End: Original strand, 30533776 - 30533825
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  30533776 ttttcatataagttataagcagttttcataagctattatgaagagcttat 30533825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 1402977 - 1403032
Alignment:
Q  446 aaactattttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||| ||| |||||    
T  1402977 aaactattttcatataagctataaattgttttcataagctatcatggagatcttat 1403032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 483
Target Start/End: Original strand, 2117381 - 2117421
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataag 483  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  2117381 gtcaaactattttcatataatctataagttgttttcataag 2117421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 501
Target Start/End: Complemental strand, 24838828 - 24838777
Alignment:
Q  450 tattttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    |||||||||||||||||||||  | ||||||||||||| ||| |||||||||    
T  24838828 tattttcatataagctataagctgatttcataagctatcatggagagcttat 24838777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 31324437 - 31324492
Alignment:
Q  446 aaactattttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    ||||||||||||| |||||||||||  |  |||||||||||| |||||||||||||    
T  31324437 aaactattttcatgtaagctataagctgcattcataagctatcatgaagagcttat 31324492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 444 - 482
Target Start/End: Complemental strand, 10452451 - 10452413
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataa 482  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  10452451 tcaaactattttcatataagctataagttgtttccataa 10452413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 497
Target Start/End: Original strand, 4246397 - 4246442
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagc 497  Q
    ||||||||||| |||||||  ||||||||||||||||||| |||||    
T  4246397 ttttcatataatctataagctgttttcataagctattatggagagc 4246442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 485
Target Start/End: Complemental strand, 7485151 - 7485118
Alignment:
Q  452 ttttcatataagctataagtggttttcataagct 485  Q
    |||||||||||||||||||| |||||||||||||    
T  7485151 ttttcatataagctataagttgttttcataagct 7485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000005; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 4078241 - 4078180
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| |||  ||||| |||||    
T  4078241 gtcaaactattttcatataatctataagttgttttcataagctatcatggcgagctaatgaa 4078180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 491
Target Start/End: Complemental strand, 10581169 - 10581121
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatg 491  Q
    |||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  10581169 gtcaaacttttttcatttaagctataagttgttttcataagctattatg 10581121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 16322827 - 16322886
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    ||||||||||||||||| ||| ||||||  ||||||||| |||||| |||||||||||||    
T  16322827 gtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatg 16322886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 47960715 - 47960660
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagctattatgaagagctt 499  Q
    |||||||||||||||||||||||||||  ||||||||||| |||  ||||||||||    
T  47960715 tcaaactattttcatataagctataagccgttttcataagttatcctgaagagctt 47960660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 48830168 - 48830113
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagct 498  Q
    |||||||||||||||||||||||||||   |||||||||||||||| | |||||||    
T  48830168 gtcaaactattttcatataagctataaactgttttcataagctattctaaagagct 48830113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 5150915 - 5150973
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    |||||||||||||||| |||| | ||| | ||||||||||||||| |||||||||||||    
T  5150915 gtcaaactattttcatttaagttgtaatttgttttcataagctatcatgaagagcttat 5150973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 12564964 - 12564922
Alignment:
Q  445 caaactattttcatataagctataagtggttttcataagctat 487  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  12564964 caaactgttttcatataagctataagttgttttcataagctat 12564922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 443 - 501
Target Start/End: Complemental strand, 29007808 - 29007750
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    ||||||||||||||||||||||||||||| ||||||||  |||| | |||| |||||||    
T  29007808 gtcaaactattttcatataagctataagttgttttcatcggctactttgaaaagcttat 29007750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 504
Target Start/End: Complemental strand, 5592765 - 5592716
Alignment:
Q  455 tcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    ||||||||||||||||| |||||||||||||| | | |||||||||||||    
T  5592765 tcatataagctataagttgttttcataagctagtcttaagagcttatgaa 5592716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 501
Target Start/End: Complemental strand, 25005880 - 25005831
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    |||||||||||||||||||| |||||||||||||||  || |||||||||    
T  25005880 ttttcatataagctataagttgttttcataagctatcctggagagcttat 25005831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 42556722 - 42556665
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||| ||| |||| ||||    
T  42556722 tcaaactacttttatataagctataagttgttttcataagctatcatggagagtttat 42556665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 443 - 496
Target Start/End: Original strand, 45205046 - 45205099
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagag 496  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||| ||| ||||    
T  45205046 gtcaaactatttccatataagctagaagttgttttcataagctatcatgtagag 45205099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 8130414 - 8130458
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctat 487  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||    
T  8130414 gtcaaactgttttcacataagctataagttgttttcataagctat 8130458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 25006126 - 25006082
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctat 487  Q
    |||||| | |||||||||||||||||||| |||||||||||||||    
T  25006126 gtcaaattgttttcatataagctataagttgttttcataagctat 25006082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 28467399 - 28467356
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagcta 486  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||    
T  28467399 gtcaaattattttcatataagctacaagttgttttcataagcta 28467356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 443 - 497
Target Start/End: Complemental strand, 27887210 - 27887156
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagc 497  Q
    ||||||| |||| |||||||||||||||| |||||||||| |||| ||| |||||    
T  27887210 gtcaaacaatttccatataagctataagttgttttcataaactatcatggagagc 27887156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 45107600 - 45107664
Alignment:
Q  443 gtcaaactattttcatataagctata---agtggttttcataagctattatgaagagcttatgaa 504  Q
    ||||||||||||||||||||| ||||   ||| ||||||||||||||| | | ||||||||||||    
T  45107600 gtcaaactattttcatataagttataattagtcgttttcataagctatcacggagagcttatgaa 45107664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 7218166 - 7218105
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||| | |||||||||||||||||||| |||||||||| ||||  || ||| ||||||||    
T  7218166 gtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaa 7218105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 488
Target Start/End: Original strand, 15361691 - 15361736
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctatt 488  Q
    |||||| |||||||||||||||||||||  ||||||||||| ||||    
T  15361691 gtcaaattattttcatataagctataagctgttttcataagatatt 15361736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 500
Target Start/End: Original strand, 17269228 - 17269285
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagctta 500  Q
    |||||| | ||||||||||||| |||||| |||||||||||||||  || ||||||||    
T  17269228 gtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagctta 17269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 499
Target Start/End: Original strand, 24909642 - 24909698
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagctt 499  Q
    |||||| |||||||||||||||||||||| ||||||||||| |||| || |||||||    
T  24909642 gtcaaattattttcatataagctataagttgttttcataagatattgtggagagctt 24909698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 24895334 - 24895393
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||| |||||||||||||||||||||| ||||||| ||| |||| || ||||||||||    
T  24895334 gtcaaattattttcatataagctataagttgttttcacaagatattgtggagagcttatg 24895393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 25507330 - 25507372
Alignment:
Q  446 aaactattttcatataagctataagtggttttcataagctatt 488  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  25507330 aaactattttcatataagctataagttgttttcataagttatt 25507372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 458 - 504
Target Start/End: Complemental strand, 46104644 - 46104598
Alignment:
Q  458 tataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||    
T  46104644 tataagctataagttgttttcataagctatgctgaagagcttatgaa 46104598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 17989115 - 17989054
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||||| ||||||||||| |||||| | ||||||||||||| |  |||||||||||||||    
T  17989115 gtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaa 17989054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 25558280 - 25558243
Alignment:
Q  446 aaactattttcatataagctataagtggttttcataag 483  Q
    |||||||||||||||||||||||||| |||||||||||    
T  25558280 aaactattttcatataagctataagttgttttcataag 25558243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 25558478 - 25558441
Alignment:
Q  446 aaactattttcatataagctataagtggttttcataag 483  Q
    |||||||||||||||||||||||||| |||||||||||    
T  25558478 aaactattttcatataagctataagttgttttcataag 25558441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 30456542 - 30456481
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||| | |||||||||||| |||||||||||||||||| ||||  || ||||||||||||    
T  30456542 gtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaa 30456481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 27481386 - 27481327
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||||| ||| ||||||||||||||||  |||||||||||||| ||| | ||||||||    
T  27481386 gtcaaactgtttccatataagctataagttattttcataagctatcatggatagcttatg 27481327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 443 - 485
Target Start/End: Complemental strand, 9527182 - 9527140
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagct 485  Q
    |||||||| ||||||||||| |||||||| |||||||||||||    
T  9527182 gtcaaactgttttcatataaactataagttgttttcataagct 9527140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 1350334 - 1350273
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||||||| |||||| |||| |||||||  |||||||||| ||||  |||||||||||||||    
T  1350334 gtcaaacttttttcacataatctataagctgttttcataaactatcctgaagagcttatgaa 1350273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 505
Target Start/End: Complemental strand, 18350790 - 18350737
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttatgaac 505  Q
    ||||| |||||| ||||||  ||||||||||||||| ||| |||||||||||||    
T  18350790 ttttcgtataagttataagctgttttcataagctatcatggagagcttatgaac 18350737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 501
Target Start/End: Complemental strand, 46104695 - 46104646
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    |||||||||||||||||||| ||||||| ||| |||  ||||||||||||    
T  46104695 ttttcatataagctataagttgttttcaaaagatatcttgaagagcttat 46104646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000008; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 15003605 - 15003562
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagctat 487  Q
    ||||||| | ||||||||||||||||||||||||||||||||||    
T  15003605 tcaaactctcttcatataagctataagtggttttcataagctat 15003562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 18704128 - 18704069
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||  |||| ||||||    
T  18704128 gtcaagctatttttatataagctataagttgttttcataagctattacaaagatcttatg 18704069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 502
Target Start/End: Complemental strand, 37588443 - 37588393
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||||||||||||||||| ||||||||||| |||| || ||||||||||    
T  37588443 ttttcatataagctataagttgttttcataagttattctggagagcttatg 37588393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 452 - 504
Target Start/End: Original strand, 2568645 - 2568697
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||| |||||    
T  2568645 ttttcgtataagctataagttgttttcataagctatcatggagagctaatgaa 2568697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 34205217 - 34205261
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctat 487  Q
    |||||| |||||| ||||||||||||||| |||||||||||||||    
T  34205217 gtcaaattatttttatataagctataagttgttttcataagctat 34205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 499
Target Start/End: Original strand, 36539724 - 36539780
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagctattatgaagagctt 499  Q
    ||||| || |||||||||||||||||||| ||||| ||||| |||| ||||||||||    
T  36539724 gtcaacctgttttcatataagctataagttgtttttataagttattctgaagagctt 36539780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 41016158 - 41016218
Alignment:
Q  444 tcaaactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    ||||||| |||||||||||||||||||| ||||||| |||| || ||| | ||||||||||    
T  41016158 tcaaactgttttcatataagctataagttgttttcacaagccatcatggaaagcttatgaa 41016218  T

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Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 502
Target Start/End: Complemental strand, 37690720 - 37690669
Alignment:
Q  452 ttttcatataagctataagtggttttcat-aagctattatgaagagcttatg 502  Q
    |||||||||||||||||||| |||||||| ||| ||||||| ||||||||||    
T  37690720 ttttcatataagctataagttgttttcataaagttattatggagagcttatg 37690669  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 452 - 490
Target Start/End: Complemental strand, 19138802 - 19138764
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattat 490  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  19138802 ttttcagataagctataagttgttttcataagctattat 19138764  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 34117621 - 34117567
Alignment:
Q  450 tattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    ||||| |||||||||||||||| | |||||||||||||  || ||||||||||||    
T  34117621 tatttacatataagctataagttgctttcataagctatcttggagagcttatgaa 34117567  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 452 - 502
Target Start/End: Complemental strand, 37526282 - 37526232
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||||||||||||||||||| ||||||||||| | || || ||||||||||    
T  37526282 ttttcatataagctataagttgttttcataagttgttctggagagcttatg 37526232  T

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Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 443 - 485
Target Start/End: Complemental strand, 39823213 - 39823171
Alignment:
Q  443 gtcaaactattttcatataagctataagtggttttcataagct 485  Q
    ||||||||| |||||||||||||| |||| |||||||||||||    
T  39823213 gtcaaactactttcatataagctacaagttgttttcataagct 39823171  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 447 - 488
Target Start/End: Complemental strand, 15557335 - 15557294
Alignment:
Q  447 aactattttcatataagctataagtggttttcataagctatt 488  Q
    |||||||||| |||||||||| ||| ||||||||||||||||    
T  15557335 aactattttcttataagctattagttgttttcataagctatt 15557294  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 502
Target Start/End: Original strand, 29054896 - 29054945
Alignment:
Q  453 tttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    ||||||||||||||||||| |||| ||||| |||| ||| ||||||||||    
T  29054896 tttcatataagctataagttgtttccataaactatcatgtagagcttatg 29054945  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 502
Target Start/End: Complemental strand, 32408682 - 32408625
Alignment:
Q  445 caaactattttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    |||| ||||||||||||||||||||    ||||||||||||||  |||||||||||||    
T  32408682 caaattattttcatataagctataaactattttcataagctatcctgaagagcttatg 32408625  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 447 - 504
Target Start/End: Original strand, 34245706 - 34245763
Alignment:
Q  447 aactattttcatataagctataagtggttttcataagctattatgaagagcttatgaa 504  Q
    |||| |||| ||||||||||||||| ||||| ||||||||| ||| |||||| |||||    
T  34245706 aactgttttaatataagctataagttgtttttataagctatcatggagagctgatgaa 34245763  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 501
Target Start/End: Complemental strand, 39257470 - 39257421
Alignment:
Q  452 ttttcatataagctataagtggttttcataagctattatgaagagcttat 501  Q
    ||||||||||| |||||||| |||||||||||| || ||| |||||||||    
T  39257470 ttttcatataaactataagttgttttcataagcaatcatggagagcttat 39257421  T

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Target: scaffold0100 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 453 - 502
Target Start/End: Original strand, 42604 - 42653
Alignment:
Q  453 tttcatataagctataagtggttttcataagctattatgaagagcttatg 502  Q
    ||||||||||||||| ||| ||||||||||||||||||||| || |||||    
T  42604 tttcatataagctattagttgttttcataagctattatgaaaagtttatg 42653  T

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