View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4637-Insertion-7 (Length: 452)

Name: NF4637-Insertion-7
Description: NF4637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4637-Insertion-7
NF4637-Insertion-7
[»] chr3 (53 HSPs)
chr3 (7-157)||(40660162-40660312)
chr3 (190-452)||(40660332-40660609)
chr3 (190-292)||(54261225-54261328)
chr3 (231-292)||(49198350-49198411)
chr3 (210-292)||(30045820-30045903)
chr3 (190-292)||(35923628-35923731)
chr3 (190-292)||(48342019-48342122)
chr3 (234-292)||(15320185-15320243)
chr3 (234-293)||(10855382-10855441)
chr3 (234-292)||(8164552-8164610)
chr3 (234-292)||(47749155-47749212)
chr3 (231-292)||(3755569-3755630)
chr3 (231-292)||(6462411-6462472)
chr3 (231-292)||(28242277-28242338)
chr3 (231-292)||(29135912-29135973)
chr3 (231-292)||(33251661-33251722)
chr3 (231-292)||(35315955-35316016)
chr3 (231-292)||(45877453-45877514)
chr3 (190-293)||(7328842-7328945)
chr3 (231-291)||(26043812-26043872)
chr3 (190-292)||(3136699-3136801)
chr3 (190-292)||(3507538-3507641)
chr3 (190-292)||(8362576-8362679)
chr3 (190-292)||(13893925-13894028)
chr3 (234-292)||(30767297-30767355)
chr3 (234-292)||(31072877-31072935)
chr3 (207-292)||(45402373-45402459)
chr3 (234-292)||(52364850-52364908)
chr3 (231-292)||(26207848-26207909)
chr3 (231-292)||(29127918-29127979)
chr3 (231-292)||(42412821-42412882)
chr3 (196-292)||(49082823-49082920)
chr3 (190-265)||(23511593-23511669)
chr3 (231-271)||(39849091-39849131)
chr3 (190-273)||(41219610-41219694)
chr3 (234-269)||(10040578-10040613)
chr3 (190-296)||(20948066-20948173)
chr3 (194-292)||(34662328-34662427)
chr3 (231-294)||(41630559-41630622)
chr3 (190-292)||(51060286-51060389)
chr3 (190-292)||(53649726-53649829)
chr3 (234-269)||(55069729-55069764)
chr3 (234-292)||(7650226-7650284)
chr3 (219-292)||(11687143-11687217)
chr3 (234-292)||(15795544-15795601)
chr3 (233-267)||(41223087-41223121)
chr3 (231-292)||(32873596-32873657)
chr3 (231-292)||(33688950-33689011)
chr3 (231-292)||(47219143-47219204)
chr3 (231-292)||(47471831-47471891)
chr3 (239-292)||(51683009-51683062)
chr3 (234-286)||(50405653-50405705)
chr3 (246-286)||(50682482-50682522)
[»] chr7 (47 HSPs)
chr7 (190-292)||(43861976-43862079)
chr7 (190-292)||(18785671-18785774)
chr7 (231-292)||(4195248-4195309)
chr7 (190-292)||(5039422-5039525)
chr7 (190-292)||(27875092-27875195)
chr7 (234-292)||(21190829-21190887)
chr7 (190-291)||(39474943-39475045)
chr7 (231-292)||(38578913-38578974)
chr7 (236-292)||(17748433-17748489)
chr7 (190-293)||(27028280-27028384)
chr7 (234-293)||(5069864-5069923)
chr7 (190-292)||(13095860-13095963)
chr7 (210-292)||(22993391-22993474)
chr7 (237-292)||(29151942-29151997)
chr7 (234-292)||(16802125-16802183)
chr7 (234-292)||(49142718-49142776)
chr7 (231-292)||(10047922-10047983)
chr7 (231-292)||(43925514-43925575)
chr7 (231-292)||(48804685-48804746)
chr7 (194-285)||(4705992-4706084)
chr7 (190-292)||(1605943-1606046)
chr7 (190-292)||(48244360-48244463)
chr7 (234-292)||(1797462-1797520)
chr7 (236-301)||(24969377-24969440)
chr7 (234-292)||(47341878-47341936)
chr7 (231-292)||(365142-365203)
chr7 (231-292)||(14650319-14650380)
chr7 (231-292)||(22973969-22974030)
chr7 (231-292)||(36619300-36619361)
chr7 (234-267)||(42210311-42210344)
chr7 (244-292)||(22268088-22268136)
chr7 (231-270)||(4228800-4228839)
chr7 (231-270)||(19914749-19914788)
chr7 (237-284)||(23658189-23658236)
chr7 (210-292)||(26423311-26423394)
chr7 (234-292)||(34659228-34659286)
chr7 (190-292)||(10317750-10317852)
chr7 (231-269)||(29805486-29805524)
chr7 (234-292)||(37514923-37514981)
chr7 (231-269)||(39420862-39420900)
chr7 (234-284)||(44336903-44336953)
chr7 (234-267)||(3353451-3353484)
chr7 (234-292)||(3603355-3603417)
chr7 (301-334)||(14650263-14650296)
chr7 (231-292)||(22573815-22573875)
chr7 (231-292)||(42032098-42032159)
chr7 (193-293)||(45447971-45448072)
[»] chr4 (51 HSPs)
chr4 (190-292)||(53599064-53599167)
chr4 (190-293)||(42722581-42722685)
chr4 (234-292)||(2559311-2559369)
chr4 (231-292)||(20532455-20532516)
chr4 (190-292)||(21429305-21429408)
chr4 (190-292)||(38168261-38168363)
chr4 (234-292)||(3159518-3159576)
chr4 (231-292)||(1446830-1446891)
chr4 (231-292)||(7246692-7246753)
chr4 (231-292)||(15839981-15840041)
chr4 (190-286)||(16450310-16450407)
chr4 (231-292)||(29895791-29895852)
chr4 (190-292)||(13073542-13073645)
chr4 (190-292)||(33647725-33647828)
chr4 (233-292)||(40272379-40272438)
chr4 (231-285)||(4738629-4738683)
chr4 (191-292)||(8889026-8889128)
chr4 (231-285)||(20421784-20421838)
chr4 (234-292)||(47078462-47078520)
chr4 (234-271)||(295582-295619)
chr4 (231-292)||(16645122-16645183)
chr4 (231-296)||(20354637-20354702)
chr4 (231-292)||(38075437-38075498)
chr4 (190-261)||(14597904-14597976)
chr4 (190-269)||(17080070-17080150)
chr4 (234-293)||(21192645-21192702)
chr4 (237-292)||(14124020-14124075)
chr4 (190-292)||(24166454-24166557)
chr4 (210-292)||(52950086-52950169)
chr4 (234-292)||(10541020-10541078)
chr4 (190-294)||(40780865-40780970)
chr4 (234-292)||(48015122-48015180)
chr4 (231-292)||(6779215-6779276)
chr4 (231-292)||(43468351-43468412)
chr4 (231-292)||(55921038-55921099)
chr4 (236-292)||(43458617-43458673)
chr4 (190-292)||(8064802-8064905)
chr4 (234-292)||(27248432-27248488)
chr4 (234-293)||(29588739-29588798)
chr4 (234-292)||(36262816-36262872)
chr4 (234-269)||(49260714-49260749)
chr4 (238-268)||(8424582-8424612)
chr4 (210-283)||(14859304-14859378)
chr4 (234-292)||(15732497-15732555)
chr4 (234-292)||(38166031-38166089)
chr4 (231-269)||(46108718-46108756)
chr4 (234-296)||(48317324-48317386)
chr4 (234-267)||(5472897-5472930)
chr4 (231-292)||(36145261-36145322)
chr4 (233-269)||(35359763-35359799)
chr4 (231-267)||(49952192-49952228)
[»] chr2 (54 HSPs)
chr2 (190-292)||(7747273-7747376)
chr2 (190-292)||(41220634-41220737)
chr2 (210-292)||(38962762-38962845)
chr2 (231-292)||(3643933-3643994)
chr2 (231-294)||(10026662-10026725)
chr2 (190-292)||(25540408-25540511)
chr2 (210-292)||(39806909-39806992)
chr2 (234-292)||(10823059-10823117)
chr2 (191-292)||(6358156-6358258)
chr2 (234-292)||(9360797-9360855)
chr2 (234-292)||(11069877-11069935)
chr2 (234-292)||(12455309-12455367)
chr2 (234-292)||(44139483-44139541)
chr2 (234-292)||(45263716-45263774)
chr2 (231-292)||(331500-331561)
chr2 (231-292)||(13026457-13026518)
chr2 (231-292)||(34356205-34356266)
chr2 (210-301)||(3848938-3849030)
chr2 (190-292)||(7787055-7787158)
chr2 (233-292)||(19976855-19976914)
chr2 (231-294)||(25604592-25604654)
chr2 (191-269)||(39201513-39201592)
chr2 (233-292)||(40968963-40969022)
chr2 (234-292)||(8410130-8410188)
chr2 (234-292)||(21286443-21286501)
chr2 (231-269)||(24179590-24179628)
chr2 (231-292)||(2550867-2550928)
chr2 (190-290)||(10669593-10669694)
chr2 (231-292)||(12864223-12864284)
chr2 (231-268)||(13104871-13104908)
chr2 (231-292)||(18649072-18649133)
chr2 (231-284)||(22593142-22593194)
chr2 (231-292)||(38005401-38005462)
chr2 (231-275)||(20116658-20116702)
chr2 (194-273)||(26805314-26805394)
chr2 (234-269)||(2149243-2149278)
chr2 (234-273)||(27725958-27725997)
chr2 (234-293)||(29653625-29653684)
chr2 (234-269)||(37560195-37560230)
chr2 (234-289)||(41031955-41032010)
chr2 (234-293)||(42770700-42770759)
chr2 (234-292)||(15079482-15079540)
chr2 (231-292)||(20612581-20612643)
chr2 (231-269)||(33005773-33005811)
chr2 (234-292)||(35946738-35946795)
chr2 (231-301)||(41187699-41187769)
chr2 (190-271)||(44945613-44945695)
chr2 (231-284)||(16325602-16325655)
chr2 (237-289)||(2528393-2528445)
chr2 (236-292)||(16034936-16034992)
chr2 (209-283)||(28525478-28525554)
chr2 (226-290)||(29421285-29421347)
chr2 (190-269)||(34346291-34346371)
chr2 (231-267)||(41187873-41187909)
[»] chr8 (36 HSPs)
chr8 (194-292)||(10927609-10927708)
chr8 (194-292)||(6100475-6100574)
chr8 (194-292)||(1012985-1013084)
chr8 (190-292)||(3418517-3418620)
chr8 (231-292)||(8141105-8141166)
chr8 (231-293)||(583816-583876)
chr8 (190-292)||(4479300-4479402)
chr8 (234-292)||(44893327-44893385)
chr8 (231-292)||(2467164-2467225)
chr8 (192-292)||(24938568-24938669)
chr8 (231-292)||(43027308-43027369)
chr8 (190-292)||(8997548-8997651)
chr8 (202-292)||(33401815-33401906)
chr8 (234-292)||(14666120-14666178)
chr8 (238-292)||(34613831-34613885)
chr8 (234-292)||(38922463-38922521)
chr8 (192-264)||(3692864-3692937)
chr8 (231-292)||(6042824-6042885)
chr8 (231-292)||(9860041-9860102)
chr8 (231-292)||(33935781-33935842)
chr8 (245-309)||(6940544-6940608)
chr8 (234-294)||(13359023-13359083)
chr8 (190-293)||(18374012-18374116)
chr8 (237-293)||(43032903-43032959)
chr8 (234-293)||(17981443-17981502)
chr8 (234-292)||(2964079-2964137)
chr8 (231-269)||(8586985-8587023)
chr8 (234-292)||(15884605-15884662)
chr8 (234-284)||(20240581-20240631)
chr8 (234-284)||(20252436-20252486)
chr8 (231-293)||(26570926-26570988)
chr8 (231-292)||(11785919-11785979)
chr8 (231-292)||(14846579-14846639)
chr8 (234-267)||(18091428-18091461)
chr8 (231-292)||(45521172-45521232)
chr8 (234-274)||(7673706-7673746)
[»] chr6 (27 HSPs)
chr6 (190-292)||(21898651-21898754)
chr6 (231-291)||(29444811-29444871)
chr6 (231-292)||(29333185-29333245)
chr6 (233-293)||(33859367-33859427)
chr6 (234-292)||(12606433-12606491)
chr6 (231-292)||(5253269-5253330)
chr6 (231-292)||(14107404-14107465)
chr6 (232-292)||(13584497-13584557)
chr6 (230-292)||(8612019-8612081)
chr6 (195-267)||(8888910-8888983)
chr6 (231-292)||(13036050-13036111)
chr6 (234-285)||(9366472-9366523)
chr6 (230-292)||(3587990-3588052)
chr6 (231-280)||(375020-375069)
chr6 (231-268)||(5029844-5029881)
chr6 (231-292)||(8932664-8932725)
chr6 (231-292)||(8944130-8944191)
chr6 (231-292)||(34954665-34954726)
chr6 (231-267)||(11142631-11142667)
chr6 (234-269)||(13391312-13391347)
chr6 (238-269)||(30788906-30788937)
chr6 (251-293)||(2105156-2105198)
chr6 (234-268)||(9633674-9633708)
chr6 (234-292)||(13468936-13468994)
chr6 (231-292)||(6606143-6606204)
chr6 (219-283)||(10396486-10396550)
chr6 (231-283)||(17114943-17114995)
[»] chr5 (47 HSPs)
chr5 (190-292)||(5731924-5732027)
chr5 (190-283)||(40117424-40117518)
chr5 (231-293)||(11845847-11845909)
chr5 (231-292)||(9805004-9805065)
chr5 (234-330)||(21149696-21149792)
chr5 (190-292)||(42086327-42086430)
chr5 (234-292)||(7866581-7866639)
chr5 (230-292)||(9812872-9812934)
chr5 (234-292)||(38897768-38897825)
chr5 (231-292)||(1538431-1538492)
chr5 (231-292)||(23383657-23383718)
chr5 (231-292)||(28857128-28857189)
chr5 (231-292)||(30349579-30349640)
chr5 (190-292)||(3653918-3654019)
chr5 (236-292)||(25417234-25417290)
chr5 (238-293)||(31890089-31890144)
chr5 (190-271)||(9168257-9168339)
chr5 (230-292)||(12705014-12705076)
chr5 (230-292)||(12766131-12766193)
chr5 (231-292)||(14588663-14588724)
chr5 (231-292)||(19572724-19572785)
chr5 (231-292)||(41163506-41163566)
chr5 (234-286)||(20682666-20682718)
chr5 (190-292)||(8513519-8513622)
chr5 (190-292)||(20525838-20525941)
chr5 (243-292)||(1899001-1899050)
chr5 (231-292)||(7308410-7308471)
chr5 (231-292)||(13664260-13664321)
chr5 (239-284)||(21487625-21487670)
chr5 (234-283)||(25467419-25467468)
chr5 (190-269)||(37263263-37263343)
chr5 (233-268)||(20705587-20705622)
chr5 (234-293)||(35403561-35403620)
chr5 (190-292)||(42291509-42291612)
chr5 (234-292)||(12081908-12081966)
chr5 (231-269)||(14974370-14974408)
chr5 (231-269)||(20590022-20590060)
chr5 (234-292)||(30995121-30995179)
chr5 (237-298)||(4016307-4016368)
chr5 (233-286)||(16757384-16757437)
chr5 (231-292)||(18136326-18136387)
chr5 (237-294)||(19839325-19839382)
chr5 (234-283)||(35638082-35638131)
chr5 (210-273)||(20255388-20255452)
chr5 (231-259)||(22295249-22295277)
chr5 (244-292)||(40060296-40060344)
chr5 (231-259)||(42861264-42861292)
[»] chr1 (57 HSPs)
chr1 (194-292)||(5855522-5855621)
chr1 (190-292)||(10422788-10422891)
chr1 (233-292)||(16263545-16263604)
chr1 (190-292)||(45361887-45361990)
chr1 (231-294)||(33498886-33498949)
chr1 (190-292)||(49078114-49078217)
chr1 (234-292)||(45536708-45536766)
chr1 (231-292)||(47312946-47313006)
chr1 (210-292)||(11397914-11397996)
chr1 (190-292)||(43959826-43959929)
chr1 (207-269)||(2270278-2270340)
chr1 (237-294)||(9853330-9853387)
chr1 (231-292)||(10336516-10336577)
chr1 (231-292)||(32142893-32142954)
chr1 (231-292)||(41663903-41663964)
chr1 (231-292)||(48798117-48798178)
chr1 (231-267)||(19195391-19195427)
chr1 (234-289)||(6563444-6563499)
chr1 (234-293)||(17642054-17642113)
chr1 (237-292)||(34877990-34878045)
chr1 (237-292)||(40288530-40288585)
chr1 (234-301)||(50371884-50371951)
chr1 (231-273)||(10507717-10507759)
chr1 (234-292)||(12036794-12036852)
chr1 (234-292)||(15465965-15466023)
chr1 (234-292)||(18915867-18915925)
chr1 (231-293)||(30927774-30927836)
chr1 (231-285)||(32150969-32151023)
chr1 (238-292)||(33418169-33418223)
chr1 (231-292)||(35908757-35908819)
chr1 (231-292)||(32871-32932)
chr1 (231-292)||(9659226-9659286)
chr1 (231-292)||(13265938-13265999)
chr1 (236-301)||(18649404-18649469)
chr1 (231-292)||(26660138-26660199)
chr1 (194-294)||(42710147-42710248)
chr1 (201-292)||(45726449-45726541)
chr1 (190-269)||(50094927-50095007)
chr1 (234-301)||(14357746-14357813)
chr1 (234-292)||(8763991-8764049)
chr1 (234-292)||(13262083-13262141)
chr1 (210-267)||(16956491-16956549)
chr1 (234-292)||(33004065-33004123)
chr1 (242-292)||(34334353-34334403)
chr1 (231-277)||(38791657-38791703)
chr1 (234-292)||(50503411-50503469)
chr1 (301-334)||(8905281-8905314)
chr1 (231-268)||(10173018-10173055)
chr1 (234-287)||(21849255-21849307)
chr1 (231-292)||(26325812-26325873)
chr1 (236-277)||(31734303-31734344)
chr1 (231-292)||(34697335-34697396)
chr1 (234-271)||(42744799-42744836)
chr1 (228-292)||(15238150-15238214)
chr1 (190-293)||(17092482-17092586)
chr1 (301-337)||(31576678-31576714)
chr1 (231-287)||(35211219-35211275)
[»] scaffold0291 (1 HSPs)
scaffold0291 (190-292)||(6857-6960)
[»] scaffold0170 (1 HSPs)
scaffold0170 (234-301)||(9838-9905)
[»] scaffold0316 (1 HSPs)
scaffold0316 (231-292)||(1660-1721)
[»] scaffold0016 (1 HSPs)
scaffold0016 (231-292)||(8747-8808)
[»] scaffold0002 (1 HSPs)
scaffold0002 (231-292)||(319424-319485)
[»] scaffold0209 (1 HSPs)
scaffold0209 (231-293)||(12576-12636)
[»] scaffold0376 (1 HSPs)
scaffold0376 (234-292)||(12672-12730)
[»] scaffold0086 (1 HSPs)
scaffold0086 (234-292)||(26185-26243)
[»] scaffold0004 (1 HSPs)
scaffold0004 (231-292)||(95027-95086)
[»] scaffold0005 (2 HSPs)
scaffold0005 (190-261)||(219402-219474)
scaffold0005 (234-292)||(271123-271181)
[»] scaffold0341 (1 HSPs)
scaffold0341 (234-289)||(18637-18692)
[»] scaffold0384 (1 HSPs)
scaffold0384 (231-292)||(5975-6035)
[»] scaffold0010 (2 HSPs)
scaffold0010 (209-285)||(25807-25884)
scaffold0010 (234-283)||(155760-155809)
[»] scaffold0050 (1 HSPs)
scaffold0050 (240-292)||(72634-72686)
[»] scaffold0041 (1 HSPs)
scaffold0041 (190-269)||(25110-25190)
[»] scaffold0001 (1 HSPs)
scaffold0001 (190-269)||(65156-65236)
[»] scaffold0079 (1 HSPs)
scaffold0079 (237-292)||(8177-8231)
[»] scaffold0009 (1 HSPs)
scaffold0009 (231-292)||(42878-42939)


Alignment Details
Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 40660162 - 40660312
Alignment:
Q  7 atttgcagcatgtcatccacgatgaccatcatgatcaggtgcatgcactcaaaatatctatctgttaattaagtatattttttcattataccaacatttt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40660162 atttgcagcatgtcatccacgatgaccatcatgatcaggtgcatgcactcaaaatatttatctgttaattaagtatattttttcattataccaacatttt 40660261  T
Q  107 aaatttactatcaaaacccgggtgataacctcctctataggctacaatccg 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40660262 aaatttactatcaaaacccgggtgataacctcctctataggctacaatccg 40660312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 190 - 452
Target Start/End: Original strand, 40660332 - 40660609
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||| | || |||||||||||| ||||| | ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||    
T  40660332 gcaccggttttcgacccaccaaaggtgaatgattaatccggttcatgcgtagaggcatgcgcactgaccaaatgttgttcctcctaggaatcgaatccgg 40660431  T
Q  289 tatttttcagatagctc--------------cttgtcactagagtccaaacaacttggttcagtttctttacttctaatgagcctagggagtgaagaatt 374  Q
    |||||  | |||| |||              |||||||||||||||  ||||| |||||||  |||||||||||||||| ||||||||||||||||||||    
T  40660432 tatttcccggataactctttagaaggagcttcttgtcactagagtctgaacaatttggttctatttctttacttctaatcagcctagggagtgaagaatt 40660531  T
Q  375 gcatgttgtaacttatgcttttcacataacctttttaccatctgaattctattgatgaggcaacgtgaccttatctca 452  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40660532 gcatgttgtaacttatgtttttcacataacttttttaccatctgaattctattgatgaggcaacgtgaccttatctca 40660609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 54261328 - 54261225
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | |||||||||||| |||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  54261328 gcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccgg 54261229  T
Q  289 tatt 292  Q
    ||||    
T  54261228 tatt 54261225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 49198411 - 49198350
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||    
T  49198411 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtatt 49198350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 210 - 292
Target Start/End: Complemental strand, 30045903 - 30045820
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||| | |||||||| || || ||||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  30045903 aaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtatt 30045820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 35923628 - 35923731
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaat-cgattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||||| |  |||| || | ||||||| ||| || ||| |||||||||||||||||||||||||||||||| ||||  ||||||||| ||    
T  35923628 gcaccggttttcgatccatcaaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctgg 35923727  T
Q  289 tatt 292  Q
    ||||    
T  35923728 tatt 35923731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 48342122 - 48342019
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    ||||| |||| ||||| || |||| || | |||||||| | |||||||||||||||||||||||| ||||| ||||||||| ||||| ||| ||||||||    
T  48342122 gcacctgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaacccgg 48342023  T
Q  289 tatt 292  Q
    ||||    
T  48342022 tatt 48342019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 15320243 - 15320185
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||    
T  15320243 tgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaacccggtatt 15320185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 10855441 - 10855382
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    |||||||||||||||| ||||||||| ||||||||| ||| |||||| ||||||||||||    
T  10855441 tgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtattt 10855382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 8164610 - 8164552
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| ||||||||||||||||||| ||||||||| | ||||||| ||||||||||||    
T  8164610 tgcgtaaaggcatgcgcactggccaagcgttgttccccttagaaattgaacccggtatt 8164552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 47749155 - 47749212
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||    
T  47749155 tgcgtagaggcatgcgcactggccaagagttgttcc-cctaggaatcgaacccggtatt 47749212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 3755630 - 3755569
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||| |||||||||||| ||||||||||||||||| | |||||||  |||||||    
T  3755630 tcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtatt 3755569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 6462472 - 6462411
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||||| ||||||||  |||   ||||||||||||||||    
T  6462472 tcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtatt 6462411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 28242338 - 28242277
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| |||||||||| ||||||||||||| ||||||||||| | |||| |||||||||||    
T  28242338 tcatgcatagaggcatgtgcactggccaaacattgttcctcctggcaatctaacccggtatt 28242277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 29135973 - 29135912
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| ||| | ||||||| ||||||||    
T  29135973 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtatt 29135912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 33251722 - 33251661
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||| ||||||||||||||||||||  |  | ||||||||||||||||    
T  33251722 tcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtatt 33251661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 35316016 - 35315955
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| ||| | ||||||||||| ||||    
T  35316016 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatatt 35315955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 45877514 - 45877453
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||| |||||||||||  |||||| | ||| ||||||||||||||||||    
T  45877514 tcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtatt 45877453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 7328945 - 7328842
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||| | || |||||||   |||||||| |  ||||||||| |||||||||||||||||||  |||||||| ||| | ||||||||||||    
T  7328945 gcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgg 7328847  T
Q  289 tattt 293  Q
    |||||    
T  7328846 tattt 7328842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 26043872 - 26043812
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtat 291  Q
    |||||||||||||||||||||||||||||  |||||||  ||| | |||||||||||||||    
T  26043872 tcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaacccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 3136699 - 3136801
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||| | |||||||| || |||||||||||||||||||||||| ||||  |||||||| |||  |||||||| ||||    
T  3136699 gcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcc-cctgaaaatcgaatccgg 3136797  T
Q  289 tatt 292  Q
    ||||    
T  3136798 tatt 3136801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 3507538 - 3507641
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||||  |||||||| |  || ||||||||||||||||||||||||||  ||||||||  |||| |||| |||||||    
T  3507538 gcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaacccgg 3507637  T
Q  289 tatt 292  Q
    ||||    
T  3507638 tatt 3507641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 8362679 - 8362576
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    ||||||||||  |||| |||||||||| | |||||||  |  ||||||||||||||||||| ||||||||||||||||| |  || | ||| ||||||||    
T  8362679 gcaccggtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacccgg 8362580  T
Q  289 tatt 292  Q
    ||||    
T  8362579 tatt 8362576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 13894028 - 13893925
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||||| || |||||||   |||||||| |  || || ||||||||||||||| || |||| ||||||||| ||| |||||| |||||||    
T  13894028 gcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaacccgg 13893929  T
Q  289 tatt 292  Q
    ||||    
T  13893928 tatt 13893925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 30767297 - 30767355
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| ||||||||||  |||||||| ||| ||||||||||||| ||||    
T  30767297 tgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatatt 30767355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 31072935 - 31072877
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| |||||| |||| ||||||||| ||| ||||||||||| ||||||    
T  31072935 tgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtatt 31072877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 45402373 - 45402459
Alignment:
Q  207 actaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||| |||||||| |  |||||||||||||||||||||| |||| |  ||||||||  |||| ||||||||||| ||||    
T  45402373 actaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaacccgatatt 45402459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 52364850 - 52364908
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||| ||| |||||||||| || | |||||||| |||||||    
T  52364850 tgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtatt 52364908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 26207848 - 26207909
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||| |||||| ||| ||||||||| | | | ||||||||||||||||    
T  26207848 tcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccggtatt 26207909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 29127979 - 29127918
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| ||||  |||||||  ||| ||||||||||||| ||||    
T  29127979 tcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaacccgatatt 29127918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 42412821 - 42412882
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||| ||||| ||||| ||||||||| ||  | ||||||||||||||||    
T  42412821 tcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtatt 42412882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 49082920 - 49082823
Alignment:
Q  196 gttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||| | ||||||||  ||||||||| ||||| || ||||| |||||||||||||| || ||||||||  ||| | |||||||| |||||||    
T  49082920 gttttcgatccattaaaggtgggtgactaatctgattcgtgtgtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtatt 49082823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 23511669 - 23511593
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttg 265  Q
    |||||||||||||| | |  ||||||| | || ||||| || ||||||||||||||||||||||||| |||||||||    
T  23511669 gcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttg 23511593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 39849131 - 39849091
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctc 271  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  39849131 tcatgcgtagaggcatgcacactggccaagcgttgttcctc 39849091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 273
Target Start/End: Complemental strand, 41219694 - 41219610
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatcgat-tcatgcgtagaggcatgcgcactggccaaacgttgttcctcct 273  Q
    |||| ||||| ||||| || |||||||| ||| ||||| |  || |||| |||||||| ||||||||||||||||||||||||||    
T  41219694 gcactggtttacgatccaccaaaggtgagtgattaatccagctcgtgcgcagaggcatacgcactggccaaacgttgttcctcct 41219610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 269
Target Start/End: Complemental strand, 10040613 - 10040578
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||||||||||||||||||| |||||||||    
T  10040613 tgcgtagaggcatgcgcactggccaagcgttgttcc 10040578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 296
Target Start/End: Original strand, 20948066 - 20948173
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||| |||||||||||| || |||||| ||||||||   ||| ||| ||||||||||| |||||| |||| ||||||||   | | |||||||||| |    
T  20948066 gcaccgattttcgatctaccaacggtgaacgactaatctcgttcgtgcatagaggcatgcacactggtcaaatgttgttccctttggtaatcgaacccag 20948165  T
Q  289 tatttttc 296  Q
    ||||||||    
T  20948166 tatttttc 20948173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 292
Target Start/End: Original strand, 34662328 - 34662427
Alignment:
Q  194 cggttttcgatctactaaaggtgaatgactaat-cgattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| | ||| |||||||||| | ||||||| ||  |||||| ||||| |||||| |||| ||||||||| ||||||||  |||||||||||| ||||    
T  34662328 cggtttccaatccactaaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaaacgttattcctcctgaaaatcgaacccgatatt 34662427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 41630559 - 41630622
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttt 294  Q
    ||||| ||||||||||||||||||| ||| ||||||||| | | | ||| ||||||||||||||    
T  41630559 tcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaacccggtatttt 41630622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 51060286 - 51060389
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatcga-ttcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || || |||| | |||||||| | ||||||||||||||||||||||||| ||||  |||||||| |||   |||||||||||     
T  51060286 gcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaacccga 51060385  T
Q  289 tatt 292  Q
    ||||    
T  51060386 tatt 51060389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 53649829 - 53649726
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||||| |  ||||||||| |||||||| |  |||||||||||| || |||||||||||||  |||||||  |||   ||||||||||||    
T  53649829 gcaccggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaacccgg 53649730  T
Q  289 tatt 292  Q
    ||||    
T  53649729 tatt 53649726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 269
Target Start/End: Original strand, 55069729 - 55069764
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||||||| |||||||||||||||||||||    
T  55069729 tgcgtagaggcatgtgcactggccaaacgttgttcc 55069764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 7650284 - 7650226
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| ||| || |||||||||  |||||||| ||| ||||||||||||||||||    
T  7650284 tgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaacccggtatt 7650226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 11687143 - 11687217
Alignment:
Q  219 tgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| || |||| |||||||||||||||||||||||| | ||||||| |||   |||| |||||||||||    
T  11687143 tgactaatctgactcatacgtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtatt 11687217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 15795544 - 15795601
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||| |||| ||||||||| ||| | |||||||| |||||||    
T  15795544 tgcgtagaggcatgcgcactgaccaagcgttgttcc-cctgggaatcgaactcggtatt 15795601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 41223087 - 41223121
Alignment:
Q  233 atgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    ||||||||||||||||||| |||||||||||||||    
T  41223087 atgcgtagaggcatgcgcattggccaaacgttgtt 41223121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 32873596 - 32873657
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||| |||||||||||| ||||||| ||| ||||||||  ||||| ||||||||| ||||||    
T  32873596 tcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtatt 32873657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 33689011 - 33688950
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  ||| |||| | ||| ||| ||||||| ||||    
T  33689011 tcatgcgtagaggcatgcgcactggccaagtgttattccccttaggaattgaacccgatatt 33688950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 47219204 - 47219143
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||| ||||| ||||||| | | | | ||||||||| ||||||    
T  47219204 tcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaacctggtatt 47219143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 47471891 - 47471831
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||| ||||||||||| ||||| | ||||||| ||| | ||||||||||||||||    
T  47471891 tcatgcgtagaagcatgcgcactagccaagcattgttcc-cctgggaatcgaacccggtatt 47471831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 51683009 - 51683062
Alignment:
Q  239 agaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||| ||| ||||||||| ||| | ||||||||| ||||||    
T  51683009 agaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtatt 51683062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 50405653 - 50405705
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaaccc 286  Q
    |||||||||||||||||||||| ||| ||||||| | ||| | ||||||||||    
T  50405653 tgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaaccc 50405705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 50682522 - 50682482
Alignment:
Q  246 tgcgcactggccaaacgttgttcctcctagaaatcgaaccc 286  Q
    |||||||||||||| ||||||||  ||||||||||||||||    
T  50682522 tgcgcactggccaagcgttgttctccctagaaatcgaaccc 50682482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 43861976 - 43862079
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||||| || |||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||    
T  43861976 gcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccgg 43862075  T
Q  289 tatt 292  Q
    ||||    
T  43862076 tatt 43862079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 18785774 - 18785671
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatcga-ttcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || | ||||||| |||||||| | ||||||||||||||||||||||||||||||  |||||||| ||||| ||||||||||||    
T  18785774 gcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccgg 18785675  T
Q  289 tatt 292  Q
    ||||    
T  18785674 tatt 18785671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 4195248 - 4195309
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||    
T  4195248 tcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtatt 4195309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 5039422 - 5039525
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||||| || ||||||||  |||||||| |  ||||||||||||| ||| |||||| ||||  |||||||||||||| |||||||| |||    
T  5039422 gcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcgg 5039521  T
Q  289 tatt 292  Q
    ||||    
T  5039522 tatt 5039525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 27875092 - 27875195
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaat-cgattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||| | |||||||||| | ||||||| ||| ||||||||||||||||| |||||||||||  ||| |||| ||| | ||||||| ||||    
T  27875092 gcaccggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaatccgg 27875191  T
Q  289 tatt 292  Q
    ||||    
T  27875192 tatt 27875195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 21190829 - 21190887
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||    
T  21190829 tgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaacccggtatt 21190887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 190 - 291
Target Start/End: Complemental strand, 39475045 - 39474943
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||| ||||||||| | |||||||||| | |||||||| |  ||||||||||||| |||||||||| |||| ||||||||| | ||| ||||||||||||    
T  39475045 gcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttccccataggaatcgaacccgg 39474946  T
Q  289 tat 291  Q
    |||    
T  39474945 tat 39474943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 38578913 - 38578974
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||| ||||    
T  38578913 tcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatatt 38578974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 17748433 - 17748489
Alignment:
Q  236 cgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||||    
T  17748433 cgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 17748489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 27028384 - 27028280
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatcgat-tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||||  |||||||| |  ||||| |||||||||||||||||||||||  |||||||| ||| ||||||||||| ||    
T  27028384 gcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacctgg 27028285  T
Q  289 tattt 293  Q
    |||||    
T  27028284 tattt 27028280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 5069864 - 5069923
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||||||||| |||| || || ||||||||||||| |||||||||||||||||||    
T  5069864 tgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcgaacccggtattt 5069923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 13095963 - 13095860
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||||  |||||||| |  |||||||||||||||||||||||||||||  |||||||| ||| | ||| ||||||||    
T  13095963 gcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaacccgg 13095864  T
Q  289 tatt 292  Q
    ||||    
T  13095863 tatt 13095860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 22993391 - 22993474
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||  |||||||| | ||| ||||||||||||||| |||||||||| ||||||||||||| | ||||||||||| ||||    
T  22993391 aaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccgatatt 22993474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 29151997 - 29151942
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||| |||||||||||| |||| | ||||||||||||||||    
T  29151997 gtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaacccggtatt 29151942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 16802183 - 16802125
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||| |||||||||||| ||||||||||||||  ||||||| ||||||||    
T  16802183 tgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggtatt 16802125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 49142718 - 49142776
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| |||||||| || ||||||||| ||||| ||||||||||||||||    
T  49142718 tgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaacccggtatt 49142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 10047922 - 10047983
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| ||||||||||||||  |||||||| ||| | ||||||||||||||||    
T  10047922 tcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 10047983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 43925575 - 43925514
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| ||||  |||||||| ||| | ||||||||||||||||    
T  43925575 tcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtatt 43925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 48804746 - 48804685
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| | | | ||||||||||||||||    
T  48804746 tcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaacccggtatt 48804685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 4705992 - 4706084
Alignment:
Q  194 cggttttcgatctactaaaggtgaatgactaatcgat-tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacc 285  Q
    ||||||||||||||| ||||||| | |||||||| |  || |||||||| ||||||| | |||| |||||||||||| |||| ||||||||||    
T  4705992 cggttttcgatctaccaaaggtggacgactaatccagctcgtgcgtagaagcatgcgtaatggctaaacgttgttccccctaaaaatcgaacc 4706084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 1606046 - 1605943
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||||| || |||||||   |||||||| |  ||| || |||||||||| ||||||||||| ||||||||| ||| ||||||||||| ||    
T  1606046 gcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaaccagg 1605947  T
Q  289 tatt 292  Q
    ||||    
T  1605946 tatt 1605943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 48244360 - 48244463
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||||| || ||||||||  |||||||| |  |||||||||||||||  |||||||  ||| | ||||||| | ||||||| ||||||||    
T  48244360 gcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggcaaacgcactgatcaagcattgttccccttagaaattgaacccgg 48244459  T
Q  289 tatt 292  Q
    ||||    
T  48244460 tatt 48244463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 1797520 - 1797462
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| |||||||||||||||| ||||||| | ||| | ||||||||||||||||    
T  1797520 tgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtatt 1797462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 24969377 - 24969440
Alignment:
Q  236 cgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttcagata 301  Q
    |||||||||| |||||||||||||  ||||||||  || |||||||||||||||||||| ||||||    
T  24969377 cgtagaggcacgcgcactggccaagtgttgttcc--ctggaaatcgaacccggtattttccagata 24969440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 47341936 - 47341878
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||  |||||||| ||| | |||||||| |||||||    
T  47341936 tgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtatt 47341878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 365203 - 365142
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||   || |||||||||||||   ||||||||||||||||    
T  365203 tcatgcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaatcgaacccggtatt 365142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 14650380 - 14650319
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||  ||||||| ||| | ||||||||||| ||||||||||||| ||||    
T  14650380 tcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaacccgatatt 14650319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 22974030 - 22973969
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||| |||||| |||||||||| ||||||||| |||   ||||||||||||||||    
T  22974030 tcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaacccggtatt 22973969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 36619300 - 36619361
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||| |||||| |||  |||||||| ||| | ||||||||||||||||    
T  36619300 tcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtatt 36619361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 267
Target Start/End: Original strand, 42210311 - 42210344
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    ||||||||||||||||||||||||||||||||||    
T  42210311 tgcgtagaggcatgcgcactggccaaacgttgtt 42210344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 22268088 - 22268136
Alignment:
Q  244 catgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||| |||||||| ||| | ||||||||||||||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtatt 22268136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 4228800 - 4228839
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcct 270  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  4228800 tcatgcgtaggggcatgtgcactggccaaacgttgttcct 4228839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 19914749 - 19914788
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcct 270  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  19914749 tcatgcgtagaggcatgcgcattggccaagcgttgttcct 19914788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 23658236 - 23658189
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaac 284  Q
    |||||||||||| |||||||||| ||||||||| ||| ||||||||||    
T  23658236 gtagaggcatgcacactggccaagcgttgttccccctggaaatcgaac 23658189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 26423311 - 26423394
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| |||||||| |  || |||||||||||| | ||||||||||| ||||||| | ||| | ||||||||||||||||    
T  26423311 aaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtatt 26423394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 34659286 - 34659228
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctaga-aatcgaacccggtatt 292  Q
    |||||||||||||||||||||| ||| ||||||||| ||| || ||||||||||||||||    
T  34659286 tgcgtagaggcatgcgcactggtcaagcgttgttcc-ccttgagaatcgaacccggtatt 34659228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 10317750 - 10317852
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatcgattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggt 289  Q
    |||||||||| ||||| || ||||||||  ||||||||   | |||| ||||||||| ||||||| ||||  ||| |||| ||| | |||||||||||||    
T  10317750 gcaccggtttccgatccaccaaaggtgagcgactaatctgcttatgcatagaggcatacgcactgaccaagtgttattccccctgggaatcgaacccggt 10317849  T
Q  290 att 292  Q
    |||    
T  10317850 att 10317852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 29805486 - 29805524
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  29805486 tcatgcgtagagacatgcgcactgaccaaacgttgttcc 29805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 37514981 - 37514923
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| ||||||||||| ||||||||||||||  ||  ||||||||||| |||||    
T  37514981 tgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaacccagtatt 37514923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 39420900 - 39420862
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  39420900 tcatgcgtagaggcacgcgcactggccaagcgttgttcc 39420862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 44336953 - 44336903
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaac 284  Q
    ||||||||||||||||||||| ||||||||| ||  |||| ||||||||||    
T  44336953 tgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaac 44336903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 267
Target Start/End: Complemental strand, 3353484 - 3353451
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    ||||||||||||||||||||||||||| ||||||    
T  3353484 tgcgtagaggcatgcgcactggccaaatgttgtt 3353451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 3603417 - 3603355
Alignment:
Q  234 tgcgtagaggcatgcgcactg----gccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||    ||||||||||||||| || |  ||||||||||||||||    
T  3603417 tgcgtagaggcatgcgcactgaccggccaaacgttgttcccccaaagaatcgaacccggtatt 3603355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 14650296 - 14650263
Alignment:
Q  301 agctccttgtcactagagtccaaacaacttggtt 334  Q
    ||||||||| ||||||||||||||||||||||||    
T  14650296 agctccttgccactagagtccaaacaacttggtt 14650263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 22573875 - 22573815
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| ||||||||||||||| |||| |||||||| |||  |||||||||||| ||||    
T  22573875 tcatgcgtaaaggcatgcgcactggtcaaatgttgttcc-cctgaaaatcgaacccgatatt 22573815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 42032159 - 42032098
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||| | ||| ||||||||||||||||||||| | | | ||||||||| ||||||    
T  42032159 tcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaaccaggtatt 42032098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 45448072 - 45447971
Alignment:
Q  193 ccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtat 291  Q
    ||||||| ||| | ||||||||||  ||||||||| || |  || ||||||| ||||||||| ||||| ||||||||  ||| ||||||||||| |||||    
T  45448072 ccggtttccgacccactaaaggtgggtgactaatctgactagtgtgtagagggatgcgcactagccaagcgttgttctccctggaaatcgaacctggtat 45447973  T
Q  292 tt 293  Q
    ||    
T  45447972 tt 45447971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 8e-28; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 53599167 - 53599064
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||||| |||||||||||| || ||||| |  ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  53599167 gcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccgg 53599068  T
Q  289 tatt 292  Q
    ||||    
T  53599067 tatt 53599064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 42722581 - 42722685
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||| | |||||||||||| |||||||| |  ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||    
T  42722581 gcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaacccgg 42722680  T
Q  289 tattt 293  Q
    |||||    
T  42722681 tattt 42722685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 2559369 - 2559311
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  2559369 tgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatccggtatt 2559311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 20532455 - 20532516
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  20532455 tcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtatt 20532516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 21429408 - 21429305
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||| | ||||| || || || ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||     
T  21429408 gcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacccga 21429309  T
Q  289 tatt 292  Q
    ||||    
T  21429308 tatt 21429305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 38168363 - 38168261
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| | | | |||||||||||| |||||||| |  ||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||||| ||    
T  38168363 gcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatg-gcactggccaagcgttgttcctcttaggaatcgaacctgg 38168265  T
Q  289 tatt 292  Q
    ||||    
T  38168264 tatt 38168261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 3159518 - 3159576
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||||||||    
T  3159518 tgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaacccggtatt 3159576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 1446891 - 1446830
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| ||| | ||||||||||||||||    
T  1446891 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 1446830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 7246692 - 7246753
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||||| |||||||||  |||| |||||||||| |||||    
T  7246692 tcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaacccagtatt 7246753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 15839981 - 15840041
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||||||| || || |||| ||||||||||||||||    
T  15839981 tcatgcgtagaggcatgcgcactggccaaacgttatt-cttctaggaatcgaacccggtatt 15840041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 16450407 - 16450310
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaaccc 286  Q
    |||||||||| ||| |||| ||||||| | |||||||| |  ||||||||||||||||| ||||||||||| ||||||||| ||| | ||||||||||    
T  16450407 gcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaaccc 16450310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 29895852 - 29895791
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| ||| | ||||||||||||||||    
T  29895852 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 29895791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 13073645 - 13073542
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || |||||| || |||||||| | |||||||||||||| ||||||||||||||||| ||||||| | | | |||||||| |||    
T  13073645 gcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaactcgg 13073546  T
Q  289 tatt 292  Q
    ||||    
T  13073545 tatt 13073542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 33647828 - 33647725
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||||| || |||| |||| |||||||| | ||| |||||||||| ||| ||||||| ||| ||||||||  ||| ||||||||||||||    
T  33647828 gcaccggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaacccgg 33647729  T
Q  289 tatt 292  Q
    ||||    
T  33647728 tatt 33647725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 40272379 - 40272438
Alignment:
Q  233 atgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||| ||||||||| | | ||||||||||||| ||||    
T  40272379 atgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatatt 40272438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 4738683 - 4738629
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacc 285  Q
    |||||||||||| ||||||||||||| || ||||||||||||| |||||||||||    
T  4738683 tcatgcgtagagacatgcgcactggcaaagcgttgttcctcctggaaatcgaacc 4738629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 292
Target Start/End: Complemental strand, 8889128 - 8889026
Alignment:
Q  191 caccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggt 289  Q
    ||||||||| ||| | || ||||||| | |||||||| |  |||||||||||| ||||||||||| ||||  |||||||| ||||| |||||||||||||    
T  8889128 caccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggt 8889029  T
Q  290 att 292  Q
    |||    
T  8889028 att 8889026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 20421838 - 20421784
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacc 285  Q
    |||||||||||||||||||||||||||||  |||||||| ||| |||||||||||    
T  20421838 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacc 20421784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 47078520 - 47078462
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| ||||||||||| ||||||||| ||| | ||||||||||||||||    
T  47078520 tgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccggtatt 47078462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 295582 - 295619
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctc 271  Q
    ||||||||||||||||||||||||||||||||||||||    
T  295582 tgcgtagaggcatgcgcactggccaaacgttgttcctc 295619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 16645183 - 16645122
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||| |||||||||||| |||||||||| |||||||| ||||  |||||||||||||||||    
T  16645183 tcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaaaatcgaacccggtatt 16645122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 20354702 - 20354637
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttc 296  Q
    ||||||||||||||||||||||| ||||| ||||||||  ||| |||||| ||| |||||||||||    
T  20354702 tcatgcgtagaggcatgcgcactagccaagcgttgttctccctggaaatcaaactcggtatttttc 20354637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 38075498 - 38075437
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||||| ||||||| | |||   ||||||||||||||||    
T  38075498 tcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggtatt 38075437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 14597904 - 14597976
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatcga-ttcatgcgtagaggcatgcgcactggccaaac 261  Q
    |||||||||||||||| |  ||||||| | |||||||| | ||| ||||||||||||||||||||||||||||    
T  14597904 gcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaac 14597976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 17080150 - 17080070
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||||||||| |  |||||||   |||||||| |  ||||||||||||||||||||||||||||| |||||||||    
T  17080150 gcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcc 17080070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 21192702 - 21192645
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    |||||||||||||||||||||||| |||||||||||||   ||| |||||||||||||||    
T  21192702 tgcgtagaggcatgcgcactggcccaacgttgttcctc--ggaactcgaacccggtattt 21192645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 14124075 - 14124020
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| |||||||| ||| | ||||||||| ||||||    
T  14124075 gtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaacctggtatt 14124020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 24166557 - 24166454
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||||| |  |||||||  ||||||||| |  || |||||||||||||||||||||||||||||||||| | | | | |||||||||| |    
T  24166557 gcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccag 24166458  T
Q  289 tatt 292  Q
    ||||    
T  24166457 tatt 24166454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 292
Target Start/End: Complemental strand, 52950169 - 52950086
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||| | |||||||| | |||||| |||||| |||||||||||||||| ||||||||| ||| | ||||||||||| ||||    
T  52950169 aaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatatt 52950086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 10541078 - 10541020
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| |||||||||| ||||||| | ||| ||||||||||||| ||||    
T  10541078 tgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaacccgatatt 10541020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 40780865 - 40780970
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctaga-aatcgaacccg 287  Q
    |||||||||| ||| | || ||||||| | |||||||| |  |||||||||||||||||||||||| |||| ||||||||| ||| || |||||||||||    
T  40780865 gcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttcc-ccttgagaatcgaacccg 40780963  T
Q  288 gtatttt 294  Q
     ||||||    
T  40780964 atatttt 40780970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 48015122 - 48015180
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||| |||||||||||||| |||||||||  || | ||||||||||||||||    
T  48015122 tgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaacccggtatt 48015180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 6779276 - 6779215
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| |||||||||||||||||||||   |||||||| ||| | ||||||||||||||||    
T  6779276 tcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggtatt 6779215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 43468412 - 43468351
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||  ||| ||||||||||| ||||||||| ||| | ||||||||||||||||    
T  43468412 tcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaacccggtatt 43468351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 55921099 - 55921038
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||| ||||||||||||||||||| ||||  |||||||| ||| | ||||||||||||||||    
T  55921099 tcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtatt 55921038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 43458673 - 43458617
Alignment:
Q  236 cgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| |||| |||||||| | ||||||| || |||||    
T  43458673 cgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtatt 43458617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 8064802 - 8064905
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||| ||| ||| |||| | |||||||| |  ||||||||||||||||||||||||| |||  ||| |||| | | | |||||||||| |    
T  8064802 gcaccggttttcgacctattaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccag 8064901  T
Q  289 tatt 292  Q
    ||||    
T  8064902 tatt 8064905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 27248488 - 27248432
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||    
T  27248488 tgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcgaacccggtatt 27248432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 29588798 - 29588739
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    |||||||||||||||||||| ||||| | ||||| | ||| | |||||||||||||||||    
T  29588798 tgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggtattt 29588739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 36262816 - 36262872
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| ||||||||||| ||||||||  ||| | ||||||||||||||||    
T  36262816 tgcgtagaggcatgtgcactggccaagcgttgttc--cctgggaatcgaacccggtatt 36262872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 269
Target Start/End: Original strand, 49260714 - 49260749
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||||||||||||||||||| |||||||||    
T  49260714 tgcgtagaggcatgcgcactggccaagcgttgttcc 49260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 268
Target Start/End: Complemental strand, 8424612 - 8424582
Alignment:
Q  238 tagaggcatgcgcactggccaaacgttgttc 268  Q
    |||||||||||||||||||||||||||||||    
T  8424612 tagaggcatgcgcactggccaaacgttgttc 8424582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 14859378 - 14859304
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaa 283  Q
    ||||||| |||||||||| |  || ||||||||| |||||||||||| ||||| |||||||||||  ||||||||    
T  14859378 aaaggtggatgactaatctggctcgtgcgtagagacatgcgcactggtcaaacattgttcctcctgaaaatcgaa 14859304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 15732497 - 15732555
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| |||||||||||  |||||||| | ||  ||||||||||||||||    
T  15732497 tgcgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaacccggtatt 15732555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 38166089 - 38166031
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| |||||||||||||||| ||||||||| ||| | |||| ||||| |||||    
T  38166089 tgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaacccagtatt 38166031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 46108756 - 46108718
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  46108756 tcatgcgtagaggcatgcgcactagccaaatgttgttcc 46108718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 48317324 - 48317386
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttc 296  Q
    ||||||||||||| | ||||| |||| |||||||||||||  |||||||| || |||||||||    
T  48317324 tgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccagtatttttc 48317386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 267
Target Start/End: Original strand, 5472897 - 5472930
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    |||||||||||||||||||||||||| |||||||    
T  5472897 tgcgtagaggcatgcgcactggccaagcgttgtt 5472930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 36145261 - 36145322
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||| ||||||||||||||||||  ||| ||||||| | ||| | ||||||||||||||||    
T  36145261 tcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtatt 36145322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 35359799 - 35359763
Alignment:
Q  233 atgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||| |||||||||||||||| |||||||||||||    
T  35359799 atgcgttgaggcatgcgcactggtcaaacgttgttcc 35359763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 49952192 - 49952228
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  49952192 tcatgcgtagaggcgtgcgcactgaccaaacgttgtt 49952228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 8e-28; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 7747376 - 7747273
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | |||||||||||| |||||||| |  |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  7747376 gcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaacccgg 7747277  T
Q  289 tatt 292  Q
    ||||    
T  7747276 tatt 7747273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 41220737 - 41220634
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaat-cgattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | |||||||||||| ||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  41220737 gcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccgg 41220638  T
Q  289 tatt 292  Q
    ||||    
T  41220637 tatt 41220634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 292
Target Start/End: Complemental strand, 38962845 - 38962762
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  38962845 aaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtatt 38962762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 3643933 - 3643994
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  3643933 tcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtatt 3643994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 10026662 - 10026725
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttt 294  Q
    ||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||||||    
T  10026662 tcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtatttt 10026725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 25540408 - 25540511
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||| | |||||||| |  || |||||||||||||||||||||||||| ||||||||| ||||| |||||||||| |    
T  25540408 gcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaacccag 25540507  T
Q  289 tatt 292  Q
    ||||    
T  25540508 tatt 25540511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 39806909 - 39806992
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||| |||||||||| || || || ||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||    
T  39806909 aaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtatt 39806992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 10823117 - 10823059
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||||    
T  10823117 tgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaacccggtatt 10823059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 6358156 - 6358258
Alignment:
Q  191 caccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggt 289  Q
    ||||||||||||| | || || |||| | |||||||| |  |||||||||||||||||||||||||||||  |||||||| ||| ||||||||| | |||    
T  6358156 caccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggt 6358255  T
Q  290 att 292  Q
    |||    
T  6358256 att 6358258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 9360797 - 9360855
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||||||| |  |||| ||||||||| ||||||    
T  9360797 tgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaatcgaacctggtatt 9360855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 11069935 - 11069877
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||| ||||||||||||||||||||||||| ||| | ||||||||| ||||||    
T  11069935 tgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaacctggtatt 11069877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 12455367 - 12455309
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||| || ||||||| | ||| ||||||||||||||||||    
T  12455367 tgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaacccggtatt 12455309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 44139541 - 44139483
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||| ||||||||||||| ||||||||| ||| | ||||||||||||||||    
T  44139541 tgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 44139483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 45263716 - 45263774
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||| |||||||||  || | ||||||||||||||||    
T  45263716 tgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtatt 45263774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 331561 - 331500
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||| |||||||||||||||||  |||||||| ||| | ||||||||||||||||    
T  331561 tcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 331500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 13026457 - 13026518
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||||| | |||||||||||   ||||||||||| ||||    
T  13026457 tcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatatt 13026518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 34356266 - 34356205
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| ||||||||||||||||| ||||  |||||||| ||| ||||||||||||||||||    
T  34356266 tcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtatt 34356205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 301
Target Start/End: Original strand, 3848938 - 3849030
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttcagata 301  Q
    ||||||||| |||||||| || || ||||||||| ||||||| |||||||||||||||| | |||   |||||||||||||||| | ||||||    
T  3848938 aaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaacccggtattctccagata 3849030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 7787158 - 7787055
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||||| || |||| ||   |||||||| |  || |||||||||||||||| |||||||||   ||||||| ||| ||||||||||||||    
T  7787158 gcaccggttttcgatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccgg 7787059  T
Q  289 tatt 292  Q
    ||||    
T  7787058 tatt 7787055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 19976855 - 19976914
Alignment:
Q  233 atgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||| ||||||||||| ||||||||| |||| |||  |||||||||||||||||    
T  19976855 atgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtatt 19976914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 25604654 - 25604592
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttt 294  Q
    ||||||||||||||||||  ||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  25604654 tcatgcgtagaggcatgcatactggtcaaacgttgttcc-cctggaaatcgaatccggtatttt 25604592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 39201513 - 39201592
Alignment:
Q  191 caccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    ||||||||| ||| | || ||||||||| |||||||| |  |||||||||||||||||| |||||||||||| |||||||    
T  39201513 caccggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttcc 39201592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 40968963 - 40969022
Alignment:
Q  233 atgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| ||||||| ||||||||||||   ||| ||||||||||||||||||    
T  40968963 atgcgtagaggcattcgcactgaccaaacgttgttttccctggaaatcgaacccggtatt 40969022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 8410188 - 8410130
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||  |||||||| ||| | ||||||||||| ||||    
T  8410188 tgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatatt 8410130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 21286501 - 21286443
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||| ||| ||||||| | ||| | ||||||||||||||||    
T  21286501 tgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtatt 21286443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 24179628 - 24179590
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  24179628 tcatgcgtagaggcatgtgcactggccaaacgttgttcc 24179590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 2550928 - 2550867
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||| ||||||||||||| ||  |||||||||||| | ||||||||||| ||||    
T  2550928 tcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatatt 2550867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 10669694 - 10669593
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||||| || ||||| || || ||||||||| |||||||||||||||| ||||||||  ||| | |||| |||||||    
T  10669694 gcaccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccgg 10669595  T
Q  289 ta 290  Q
    ||    
T  10669594 ta 10669593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 12864284 - 12864223
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||| |||||||||||||||| ||||  |||||||| ||| ||||||||| ||||||||    
T  12864284 tcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatccggtatt 12864223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 268
Target Start/End: Original strand, 13104871 - 13104908
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttc 268  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  13104871 tcatgcgtagaggcatgcgcactggccaagcgttgttc 13104908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 18649072 - 18649133
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| |||||  |||||||||||   ||||||| ||||||||    
T  18649072 tcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtatt 18649133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 22593194 - 22593142
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaac 284  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||    
T  22593194 tcatgcgtagaggcatgcgcactggcc-aacgttgttccccctgggaatcgaac 22593142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 38005462 - 38005401
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||| ||||||||||||||||||||||| ||||||||| | | | |||||||||| |||||    
T  38005462 tcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccagtatt 38005401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 20116658 - 20116702
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctag 275  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||    
T  20116658 tcatgcgtagaggcatgcgcattggccatgcgttgttcctcctag 20116702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 26805394 - 26805314
Alignment:
Q  194 cggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcct 273  Q
    |||||||||| | || |||||||   |||||||| || ||||||||||||||||| ||||||||||||||| ||| |||||    
T  26805394 cggttttcgagccaccaaaggtgggcgactaatccgactcatgcgtagaggcatgtgcactggccaaacgtcgtttctcct 26805314  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 269
Target Start/End: Original strand, 2149243 - 2149278
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    ||||||||||||||||||||||||||||||| ||||    
T  2149243 tgcgtagaggcatgcgcactggccaaacgttattcc 2149278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 273
Target Start/End: Complemental strand, 27725997 - 27725958
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcct 273  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  27725997 tgcgtagaggcatgcgcactggccaagcattgttcctcct 27725958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 29653684 - 29653625
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||||||||||||||| |||| |||||||   ||| ||||||||| |||||||||    
T  29653684 tgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaatccggtattt 29653625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 269
Target Start/End: Complemental strand, 37560230 - 37560195
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    ||||||||||||||||||||| ||||||||||||||    
T  37560230 tgcgtagaggcatgcgcactgaccaaacgttgttcc 37560195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 41031955 - 41032010
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggt 289  Q
    ||||||||||||||| ||||||||||  |||||||| ||| | |||||||||||||    
T  41031955 tgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggt 41032010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 42770700 - 42770759
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    |||| ||||||||||||||||||||| ||||||||| |||   ||| |||||||||||||    
T  42770700 tgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggtattt 42770759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 15079540 - 15079482
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| ||||| |||||| ||| ||||||||| ||| |||||||||||| |||||    
T  15079540 tgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtatt 15079482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 20612581 - 20612643
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgtt-cctcctagaaatcgaacccggtatt 292  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||   ||||||||||||||||    
T  20612581 tcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcgaacccggtatt 20612643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 33005811 - 33005773
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  33005811 tcatgcgtagaggcatgcgcactggccaagtgttgttcc 33005773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 35946795 - 35946738
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| || ||||||| ||||||||| ||||| |||||||| |||||||    
T  35946795 tgcgtagaggcatgcacaatggccaagcgttgttcc-cctaggaatcgaactcggtatt 35946738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 41187769 - 41187699
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttcagata 301  Q
    |||||||||||||||||  |||||| |||  |||||||| |||   |||||||||||||||| ||||||||    
T  41187769 tcatgcgtagaggcatggacactggtcaagtgttgttccccctcataatcgaacccggtattcttcagata 41187699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 44945695 - 44945613
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctc 271  Q
    |||||||||| ||||| ||||||||||   |||||||| |  || ||||||||||||||||||||  |||| |||||||||||    
T  44945695 gcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgttcctc 44945613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 16325655 - 16325602
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaac 284  Q
    |||||||||||||||||| ||||||||||  |||||||| ||| | ||||||||    
T  16325655 tcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaac 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 2528393 - 2528445
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggt 289  Q
    |||||||||||| ||||| |||| ||||||||| ||| | |||||||||||||    
T  2528393 gtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaacccggt 2528445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 16034992 - 16034936
Alignment:
Q  236 cgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||| |||||||| |||||| ||| ||||||||| |||  |||||||||||||||||    
T  16034992 cgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcgaacccggtatt 16034936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 28525478 - 28525554
Alignment:
Q  209 taaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttg-ttcctcctagaaatcgaa 283  Q
    |||||||| |||||||||| |  || ||||||||||||||||||||||||||  |||| |||| ||| |||||||||    
T  28525478 taaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttccccctggaaatcgaa 28525554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 29421347 - 29421285
Alignment:
Q  226 tcgattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggta 290  Q
    |||| |||||||||||||||||| ||||| |||| ||||||||| ||| |||||| |||||||||    
T  29421347 tcgactcatgcgtagaggcatgctcactgcccaagcgttgttcc-cct-gaaatcaaacccggta 29421285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 34346291 - 34346371
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||| ||| | || ||||||||  || ||||| || |||||||||||||||||| ||||||||||  ||||||||    
T  34346291 gcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgttcc 34346371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 41187909 - 41187873
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  41187909 tcatgcgtagaggcatgcgcactggtcaagcgttgtt 41187873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 194 - 292
Target Start/End: Complemental strand, 10927708 - 10927609
Alignment:
Q  194 cggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| ||| | |||||||||||| |||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  10927708 cggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtatt 10927609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 194 - 292
Target Start/End: Complemental strand, 6100574 - 6100475
Alignment:
Q  194 cggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||| | |||||||||||| |||||||| |  |||||||||| |||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  6100574 cggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtatt 6100475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 292
Target Start/End: Original strand, 1012985 - 1013084
Alignment:
Q  194 cggttttcgatctactaaaggtgaatgactaat-cgattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||| |||||||||||| || |||| ||  ||||||||||||||||| | ||||||||| ||||||||| ||| | ||||||||||||||||    
T  1012985 cggttttcgatccactaaaggtgaacgattaattcggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtatt 1013084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 3418517 - 3418620
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    ||||||||||  || | |||||||||| | |||||||| || ||||||||||| |||||||||||||||||  ||||||||||||| ||||||||||||     
T  3418517 gcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaacccga 3418616  T
Q  289 tatt 292  Q
    ||||    
T  3418617 tatt 3418620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 8141166 - 8141105
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| ||||||||||||||||||    
T  8141166 tcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtatt 8141105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 583876 - 583816
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||||||||||||||||||| ||| ||||||||  ||||| |||||||||||||||||    
T  583876 tcatgcgtagaggcatgcgcactggtcaagcgttgttc--cctaggaatcgaacccggtattt 583816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 4479300 - 4479402
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatcgat-tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||| | |||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||| | ||||||| ||||    
T  4479300 gcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcc-cctgggaatcgaatccgg 4479398  T
Q  289 tatt 292  Q
    ||||    
T  4479399 tatt 4479402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 44893327 - 44893385
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| |||||||||| | ||||||| ||||||||| ||||||||||||    
T  44893327 tgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtatt 44893385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 2467164 - 2467225
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| ||||| ||||||||||||||||  |||||||| ||| ||||||||||||||||||    
T  2467164 tcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaacccggtatt 2467225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 24938568 - 24938669
Alignment:
Q  192 accggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggta 290  Q
    |||||||| ||||| |  ||||||| |||||||||| | |||||||||||||||||||||| || ||||  |||||| |  |||||||||||||| ||||    
T  24938568 accggtttccgatccatcaaaggtggatgactaatccggttcatgcgtagaggcatgcgcattgaccaagtgttgtttcatctagaaatcgaacctggta 24938667  T
Q  291 tt 292  Q
    ||    
T  24938668 tt 24938669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 43027369 - 43027308
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||| | |||||||||| |||||    
T  43027369 tcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaacccagtatt 43027308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 8997548 - 8997651
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || |||| |||| |||||||| |  ||||||||| ||||||||| |||||| |||||||||||| | ||| |||||||| |||    
T  8997548 gcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgttccccttaggaatcgaacacgg 8997647  T
Q  289 tatt 292  Q
    ||||    
T  8997648 tatt 8997651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 33401815 - 33401906
Alignment:
Q  202 gatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||| ||||||||||   |||||||| || |||||||||||||||||| |||||| |||  |||||||| |||  |||||||||||||||||    
T  33401815 gatccactaaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtatt 33401906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 14666120 - 14666178
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||  |||||| | ||| | ||||||||||||||||    
T  14666120 tgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtatt 14666178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 34613831 - 34613885
Alignment:
Q  238 tagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||||||| ||||    
T  34613831 tagaggcatgcgtactggccagacgttgttcctcctgggaatcgaacccgatatt 34613885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 38922463 - 38922521
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| ||||||||||||||||||| |||||||||  || | ||||||||||||||||    
T  38922463 tgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtatt 38922521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 3692937 - 3692864
Alignment:
Q  192 accggttttcgatctactaaaggtgaatgactaat-cgattcatgcgtagaggcatgcgcactggccaaacgtt 264  Q
    |||||||||||| |||| ||||||||| || |||| ||  ||||||||||||| |||||||||| |||||||||    
T  3692937 accggttttcgacctaccaaaggtgaacgattaattcggctcatgcgtagaggtatgcgcactgaccaaacgtt 3692864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 6042885 - 6042824
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||  ||||||||||||||||||| ||||||||| | | | ||||||||||||||||    
T  6042885 tcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtatt 6042824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 9860041 - 9860102
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||| |||||||||||| ||||||||||  |||||||| ||| | ||||||||||||||||    
T  9860041 tcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtatt 9860102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 33935781 - 33935842
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| |||||||||||||||||||  |||||||  ||||| ||||||| ||||||||    
T  33935781 tcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtatt 33935842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 309
Target Start/End: Complemental strand, 6940608 - 6940544
Alignment:
Q  245 atgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttcagatagctccttg 309  Q
    ||||||||| ||||| ||||||||| ||| ||||||||||||| |||||| | |||| |||||||    
T  6940608 atgcgcactagccaagcgttgttccacctggaaatcgaacccgatattttccggatacctccttg 6940544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 13359083 - 13359023
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttt 294  Q
    |||||||||| |||||||||| |||| |||||||||| ||   ||||||||||||||||||    
T  13359083 tgcgtagaggtatgcgcactgtccaagcgttgttccttctgagaatcgaacccggtatttt 13359023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 18374116 - 18374012
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||| | || |||| || | |||||||| |  ||||||||||||||||||||||||| ||| ||||||||  |||   ||||||||| ||    
T  18374116 gcaccggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctgg 18374017  T
Q  289 tattt 293  Q
    |||||    
T  18374016 tattt 18374012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 43032959 - 43032903
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||||||||||||||||| ||||||||| ||| | ||||||| ||| |||||    
T  43032959 gtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaatccgatattt 43032903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 17981502 - 17981443
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||||||||| |||||| |||  |||||||| ||| | |||||||||||||||||    
T  17981502 tgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaacccggtattt 17981443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 2964137 - 2964079
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| || ||||||| ||||||||||| | | |||||||| |||||||    
T  2964137 tgcgtagaggcatgcacattggccaagcgttgttcctcatcggaatcgaacacggtatt 2964079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 8586985 - 8587023
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  8586985 tcatgcgtagaggtatgcgcactggccaagcgttgttcc 8587023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 15884605 - 15884662
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||| |||||  |||||||| ||| | ||||||||||||||||    
T  15884605 tgcgtagaggcatgcgcacttgccaagtgttgttcc-cctgggaatcgaacccggtatt 15884662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 20240631 - 20240581
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaac 284  Q
    ||||||||||||||||||||| ||||||||| ||  |||| ||||||||||    
T  20240631 tgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaac 20240581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 20252436 - 20252486
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaac 284  Q
    ||||||||||||||||||||| ||||||||| ||  |||| ||||||||||    
T  20252436 tgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaac 20252486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 26570988 - 26570926
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||||| |||| | |||||||||| ||||||||| ||||| ||| ||||||| |||||    
T  26570988 tcatgcgtagatgcatacacactggccaagcgttgttccccctaggaattgaacccgatattt 26570926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 11785979 - 11785919
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||| ||||| |||||||||| ||| ||| | ||||||| ||||||||    
T  11785979 tcatgcgtagaggcatgcacactgcccaaacgttgctcc-ccttggaatcgaatccggtatt 11785919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 14846639 - 14846579
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| |||| | ||||||| |||   ||||||||||||||||    
T  14846639 tcatgcgtagaggcatgcgcactgaccaatcattgttcc-cctgagaatcgaacccggtatt 14846579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 267
Target Start/End: Complemental strand, 18091461 - 18091428
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    |||||||||||||||||||||| |||||||||||    
T  18091461 tgcgtagaggcatgcgcactggtcaaacgttgtt 18091428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 45521232 - 45521172
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||  |||  |||||||| ||| | ||||||||||||||||    
T  45521232 tcatgcgtagaggcatgcgcactgatcaagtgttgttcc-cctgggaatcgaacccggtatt 45521172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 7673706 - 7673746
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctccta 274  Q
    ||||||||||||||| |||| ||||||||||||||| ||||    
T  7673706 tgcgtagaggcatgcacactagccaaacgttgttcccccta 7673746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 21898754 - 21898651
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | |||||||||||| |||||||| |  ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  21898754 gcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccgg 21898655  T
Q  289 tatt 292  Q
    ||||    
T  21898654 tatt 21898651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 29444811 - 29444871
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtat 291  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  29444811 tcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaacccggtat 29444871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 29333185 - 29333245
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  29333185 tcatgcgtagaggcatgcgcactggccaaacgttgttcc-cctggaaatcgaacccggtatt 29333245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 33859367 - 33859427
Alignment:
Q  233 atgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  33859367 atgcgtagaggcatgcgcactgggcaaacgttgttccccctaaaaatcgaacccggtattt 33859427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 12606491 - 12606433
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||| | ||||||    
T  12606491 tgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaatctggtatt 12606433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 5253269 - 5253330
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| ||| | ||||||||||||||||    
T  5253269 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 5253330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 14107404 - 14107465
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| | ||||||||||||||||    
T  14107404 tcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtatt 14107465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 13584497 - 13584557
Alignment:
Q  232 catgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||| ||||||||||||||||||||||||||||||| || ||| ||||||||| ||||||    
T  13584497 catgcatagaggcatgcgcactggccaaacgttgttcatcttaggaatcgaacctggtatt 13584557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 8612019 - 8612081
Alignment:
Q  230 ttcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||| |||||| |||||| ||| ||||||||||||| | ||||||||||||||||    
T  8612019 ttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtatt 8612081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 8888983 - 8888910
Alignment:
Q  195 ggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    ||||||||||| |  ||||||| | |||||||| || ||||||||||||| |||||||||||||||||||||||    
T  8888983 ggttttcgatccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtt 8888910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 13036050 - 13036111
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| |||  |||||||||||| ||||    
T  13036050 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccgatatt 13036111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 285
Target Start/End: Original strand, 9366472 - 9366523
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacc 285  Q
    |||||||||||||||||||||||||| |||| |||| |||| ||||||||||    
T  9366472 tgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatcgaacc 9366523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 3587990 - 3588052
Alignment:
Q  230 ttcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| ||| ||||||||||| ||||||||| | | | ||||||||||||||||    
T  3587990 ttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaacccggtatt 3588052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 375020 - 375069
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatc 280  Q
    |||||| ||||||||||||||||||||||||||| |||||| || |||||    
T  375020 tcatgcatagaggcatgcgcactggccaaacgttattcctcttaaaaatc 375069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 5029881 - 5029844
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttc 268  Q
    |||||||||||||||||||||||| |||||||||||||    
T  5029881 tcatgcgtagaggcatgcgcactgaccaaacgttgttc 5029844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 8932725 - 8932664
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||| |||||  |||||||| ||| | ||||||||||| ||||    
T  8932725 tcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatatt 8932664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 8944191 - 8944130
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||| |||||  |||||||| ||| | ||||||||||| ||||    
T  8944191 tcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatatt 8944130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 34954665 - 34954726
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||| ||| ||||||||||||||||||||| |||   ||||||||| ||||||    
T  34954665 tcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaacctggtatt 34954726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 11142667 - 11142631
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    ||||||||||||||||||||||||| |||||||||||    
T  11142667 tcatgcgtagaggcatgcgcactggtcaaacgttgtt 11142631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 269
Target Start/End: Complemental strand, 13391347 - 13391312
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||||||||||||||||||||| |||||||    
T  13391347 tgcgtagaggcatgcgcactggccaaacattgttcc 13391312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 269
Target Start/End: Original strand, 30788906 - 30788937
Alignment:
Q  238 tagaggcatgcgcactggccaaacgttgttcc 269  Q
    ||||||||||||||||||||||||||||||||    
T  30788906 tagaggcatgcgcactggccaaacgttgttcc 30788937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 2105156 - 2105198
Alignment:
Q  251 actggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||| ||||||| | |||||||||||||||||||||||    
T  2105156 actggccaagcgttgtttcccctagaaatcgaacccggtattt 2105198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 268
Target Start/End: Original strand, 9633674 - 9633708
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttc 268  Q
    |||||||||||||||||||||||||| ||||||||    
T  9633674 tgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 13468994 - 13468936
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| |||||| |||| ||||||||| ||||| ||| ||||| ||||||    
T  13468994 tgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaattgaacctggtatt 13468936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 6606143 - 6606204
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||  ||||||||||  |||||||| |||   ||||||||||||||||    
T  6606143 tcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaacccggtatt 6606204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 10396550 - 10396486
Alignment:
Q  219 tgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaa 283  Q
    ||||||||| || |||||| |||||  ||||||||||||||||||||||||| |||| ||||||||    
T  10396550 tgactaatccgactcatgcatagagatatgcgcactggccaaacgttgttcc-cctaaaaatcgaa 10396486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 17114943 - 17114995
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaa 283  Q
    |||||||||||||||||  || ||||||| |||||||||| |||| |||||||    
T  17114943 tcatgcgtagaggcatgtccattggccaagcgttgttccttctaggaatcgaa 17114995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 5731924 - 5732027
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | |||||||||||| |||||||| |  |||| |||||||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  5731924 gcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccgg 5732023  T
Q  289 tatt 292  Q
    ||||    
T  5732024 tatt 5732027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 40117518 - 40117424
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaa 283  Q
    |||||||||||||||| || ||||||||| || ||||| |  ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||    
T  40117518 gcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaa 40117424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 11845847 - 11845909
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  11845847 tcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaacccgatattt 11845909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 9805065 - 9805004
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||||    
T  9805065 tcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 9805004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 330
Target Start/End: Complemental strand, 21149792 - 21149696
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttcagatagctccttgtcactagagtccaaacaactt 330  Q
    ||||||||| |||||||||||| ||||||||||||| |||  |||||||||| ||||||  ||| |||  |||||| |||| |||||||||||||||    
T  21149792 tgcgtagagtcatgcgcactggtcaaacgttgttccccctgaaaatcgaacctggtattcctcaaatacgtccttgccactggagtccaaacaactt 21149696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 42086430 - 42086327
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||| | |||||||| |  ||||||||||||||||||||||||| ||| ||||||||| ||| | ||||||||||||    
T  42086430 gcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacccgg 42086331  T
Q  289 tatt 292  Q
    ||||    
T  42086330 tatt 42086327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 7866639 - 7866581
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||    
T  7866639 tgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtatt 7866581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 9812934 - 9812872
Alignment:
Q  230 ttcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||| |||||| |||||||||| ||||||||||||| | ||||||||||||||||    
T  9812934 ttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtatt 9812872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 38897768 - 38897825
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  38897768 tgcgtagaggcatgcgcactggccaagcgttgttcc-cctggaaatcgaacccggtatt 38897825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 1538492 - 1538431
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| ||| | ||||||||||||||||    
T  1538492 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 1538431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 23383718 - 23383657
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||| | ||||||||||||||||    
T  23383718 tcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 23383657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 28857189 - 28857128
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| ||| | ||||||||||||||||    
T  28857189 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 28857128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 30349640 - 30349579
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| |||||||||||||||||||||| | ||||||| |||||||||| |||||||||||    
T  30349640 tcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtatt 30349579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 3653918 - 3654019
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||||||||| || ||||||| | |||||||| |  || |||||||||||||||||||||| ||| ||||||||   |||| ||||||||||||    
T  3653918 gcaccggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgttc--tctaggaatcgaacccgg 3654015  T
Q  289 tatt 292  Q
    ||||    
T  3654016 tatt 3654019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 25417234 - 25417290
Alignment:
Q  236 cgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||||    
T  25417234 cgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 25417290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 31890144 - 31890089
Alignment:
Q  238 tagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||  ||||||||    
T  31890144 tagaggcatgtgcactggtcaaacgttgttcctcctagaaatcgaattcggtattt 31890089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 9168257 - 9168339
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctc 271  Q
    |||||| ||||||| | |||||||||| | |||||||| |  ||||||||||||| ||||||||||||||| |||||||||||    
T  9168257 gcaccgattttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttcctc 9168339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 12705076 - 12705014
Alignment:
Q  230 ttcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||| |||||| |||||| ||| ||||||||||||| | ||||||||||||||||    
T  12705076 ttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtatt 12705014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 12766193 - 12766131
Alignment:
Q  230 ttcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||| |||||||||| | |||||||||||   ||||||||||||||||    
T  12766193 ttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaacccggtatt 12766131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 14588663 - 14588724
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||  |||||||||||| ||||    
T  14588663 tcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaacccgatatt 14588724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 19572785 - 19572724
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| ||| | |||| |||||||||||    
T  19572785 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtatt 19572724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 41163506 - 41163566
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||| |||| ||||||||||||||||||||| ||| | ||||||||||||||||    
T  41163506 tcatgcgtagagacatgtgcactggccaaacgttgttcc-cctgggaatcgaacccggtatt 41163566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 20682666 - 20682718
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaaccc 286  Q
    |||||||||||||||||||||||||| ||||||||| ||| |||||| |||||    
T  20682666 tgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatctaaccc 20682718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 8513622 - 8513519
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||| | |||||||| |  || |||||||||||||| ||||||||||| | ||||| | ||||| ||||||||||||    
T  8513622 gcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaacccgg 8513523  T
Q  289 tatt 292  Q
    ||||    
T  8513522 tatt 8513519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 20525941 - 20525838
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||||| || || |||| | |||||||| |  |||||||||||||||||||||||||| ||  |||||||| ||| | |||||||||||     
T  20525941 gcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccga 20525842  T
Q  289 tatt 292  Q
    ||||    
T  20525841 tatt 20525838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 1899050 - 1899001
Alignment:
Q  243 gcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||| ||||||||| ||| | ||||||||||||||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 1899001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 7308410 - 7308471
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||| |||||| |||| ||||||||| ||| | ||||||||||| ||||    
T  7308410 tcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatatt 7308471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 13664321 - 13664260
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||||||  |||||||| |||   ||||||| ||||||||    
T  13664321 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaatccggtatt 13664260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 21487670 - 21487625
Alignment:
Q  239 agaggcatgcgcactggccaaacgttgttcctcctagaaatcgaac 284  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||    
T  21487670 agaggcatgcgcactagccaaacgttgttcctcctgaaaatcgaac 21487625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 25467468 - 25467419
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaa 283  Q
    |||||||||||||||| ||||||||| |||||||||||||  ||||||||    
T  25467468 tgcgtagaggcatgcgtactggccaatcgttgttcctcctgaaaatcgaa 25467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 37263343 - 37263263
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||| ||||| | |||||||| | |||||||| |  || |||||||||||||||||| ||||||| |||||||||    
T  37263343 gcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcc 37263263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Complemental strand, 20705622 - 20705587
Alignment:
Q  233 atgcgtagaggcatgcgcactggccaaacgttgttc 268  Q
    |||||||||||||||||||||| |||||||||||||    
T  20705622 atgcgtagaggcatgcgcactgaccaaacgttgttc 20705587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 35403561 - 35403620
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||| |||||||| ||||||| ||||||||| |||   |||||||||||||||||    
T  35403561 tgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtattt 35403620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 42291509 - 42291612
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||||| |  ||||||| | |||||||| |  || |||||||||||||| ||||||||||| ||||||||  ||| | |||| |||||||    
T  42291509 gcaccggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccgg 42291608  T
Q  289 tatt 292  Q
    ||||    
T  42291609 tatt 42291612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 12081966 - 12081908
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||| ||||||||||||||||| ||||||||| |||   |||||||||| |||||    
T  12081966 tgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaacccagtatt 12081908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 14974370 - 14974408
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  14974370 tcatgcgtagaggcatgtgcactggccaaatgttgttcc 14974408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 20590060 - 20590022
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  20590060 tcatgcgtagagtcatgcgcactggccaagcgttgttcc 20590022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 30995179 - 30995121
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||| ||||||||  |||||||| ||| | ||||||||| ||||||    
T  30995179 tgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtatt 30995121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 4016307 - 4016368
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttcag 298  Q
    |||||||||||||||||||||||  |||||||| |||   ||||||||||| ||||| ||||    
T  4016307 gtagaggcatgcgcactggccaagtgttgttccccctgataatcgaacccgatatttctcag 4016368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 16757437 - 16757384
Alignment:
Q  233 atgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaaccc 286  Q
    |||||||||||||||||||||  |||||||||| |||| |  ||||||||||||    
T  16757437 atgcgtagaggcatgcgcactaaccaaacgttggtccttccggaaatcgaaccc 16757384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 18136326 - 18136387
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||| |||||||||||| ||||| ||||  |||||||| ||| | ||||||||||||||||    
T  18136326 tcatgtgtagaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccggtatt 18136387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 19839382 - 19839325
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttt 294  Q
    ||||||||||||||||||  ||| |||||||||||||  |||| ||| ||||||||||    
T  19839382 gtagaggcatgcgcactgatcaagcgttgttcctcctgaaaattgaatccggtatttt 19839325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 35638082 - 35638131
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaa 283  Q
    |||||||||| |||| ||||| ||||||||||||||||||  ||||||||    
T  35638082 tgcgtagaggtatgcacactgaccaaacgttgttcctcctgaaaatcgaa 35638131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 20255452 - 20255388
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcct 273  Q
    ||||||| | |||||||| || ||||||||||||||||||||||||| |||  ||||||| ||||    
T  20255452 aaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttcgtcct 20255388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 259
Target Start/End: Complemental strand, 22295277 - 22295249
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaa 259  Q
    |||||||||||||||||||||||||||||    
T  22295277 tcatgcgtagaggcatgcgcactggccaa 22295249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 40060344 - 40060296
Alignment:
Q  244 catgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||  |||||||| |||  |||||||||||||||||    
T  40060344 catgcgcactggccaagtgttgttccccctgaaaatcgaacccggtatt 40060296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 259
Target Start/End: Original strand, 42861264 - 42861292
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaa 259  Q
    |||||||||||||||||||||||||||||    
T  42861264 tcatgcgtagaggcatgcgcactggccaa 42861292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 194 - 292
Target Start/End: Complemental strand, 5855621 - 5855522
Alignment:
Q  194 cggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| ||| | |||||||||||| |||||||| |  ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  5855621 cggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtatt 5855522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 10422891 - 10422788
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| |||  ||| ||||||| | |||||||| |  |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  10422891 gcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccgg 10422792  T
Q  289 tatt 292  Q
    ||||    
T  10422791 tatt 10422788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 16263604 - 16263545
Alignment:
Q  233 atgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  16263604 atgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaacctggtatt 16263545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 45361887 - 45361990
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | |||||||||||| |||||||| |  | |||||||| |||||||||||||||||| |||||||||||||   ||||||||||||    
T  45361887 gcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaacccgg 45361986  T
Q  289 tatt 292  Q
    ||||    
T  45361987 tatt 45361990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 33498886 - 33498949
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttt 294  Q
    ||||||||||||||||||||||||||||| ||||| |||||||   ||||||||||||||||||    
T  33498886 tcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtatttt 33498949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 49078217 - 49078114
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| |||| || |||||| |||||||| |  |||||||||||||||||||||||||||||  |||||| | ||| | ||||||||||||    
T  49078217 gcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccgg 49078118  T
Q  289 tatt 292  Q
    ||||    
T  49078117 tatt 49078114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 45536766 - 45536708
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| ||||||||||| ||||||||| | ||||||||||||||||||||    
T  45536766 tgcgtagaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtatt 45536708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 47312946 - 47313006
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| |||| |||||||||||    
T  47312946 tcatgcgtagaggcatacgcactggccaaacgttgttcc-cctaggaatcaaacccggtatt 47313006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 11397914 - 11397996
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||| | |||||||| || |||||||||||||||| |||| ||||||||||||||||| ||| | ||||||||||||||||    
T  11397914 aaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcc-cctcggaatcgaacccggtatt 11397996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 43959826 - 43959929
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||||| ||||||||||   |||||||| |  || |||||||||||||||||||||||||| ||||||||| ||| | ||| |||||||     
T  43959826 gcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaacccga 43959925  T
Q  289 tatt 292  Q
    ||||    
T  43959926 tatt 43959929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 2270278 - 2270340
Alignment:
Q  207 actaaaggtgaatgactaatcgattcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||| | |||||| |||||||    
T  2270278 actaaaggtgaatgattaatcgactcatgcgtagaggtatgcgcacagaccaaacattgttcc 2270340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 9853330 - 9853387
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttt 294  Q
    |||||||||||||||||||  |||||||||| | ||||| ||||||||||||||||||    
T  9853330 gtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaacccggtatttt 9853387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 10336577 - 10336516
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||| ||| ||||||||| |||  |||||||||||| ||||    
T  10336577 tcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatatt 10336516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 32142893 - 32142954
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| |||||||||||||||||||  |||||||| |||  |||||||||||||||||    
T  32142893 tcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccggtatt 32142954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 41663903 - 41663964
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| ||||  |||||||| ||| | ||||||||||||||||    
T  41663903 tcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtatt 41663964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 48798117 - 48798178
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||| ||||||||||||| ||||    
T  48798117 tcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatatt 48798178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 19195427 - 19195391
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    |||||||||||||||||||||||||||||||||||||    
T  19195427 tcatgcgtagaggcatgcgcactggccaaacgttgtt 19195391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 6563499 - 6563444
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggt 289  Q
    ||||||||| |||| ||||||||||| ||||||||| ||||| |||||||||||||    
T  6563499 tgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggt 6563444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 17642054 - 17642113
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||||||||||||||||||||  |||||||| ||| | |||||||||| ||||||    
T  17642054 tgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccagtattt 17642113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 34878045 - 34877990
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||  |||||||| ||||| ||||||||| ||||||    
T  34878045 gtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtatt 34877990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 40288530 - 40288585
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||  ||||||||| ||||||||| ||| ||||||||||||||||||    
T  40288530 gtagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccggtatt 40288585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 50371884 - 50371951
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttcagata 301  Q
    |||||||| ||||||| ||||||||| |||||||| ||||  ||||||||| || |||||||||||||    
T  50371884 tgcgtagaagcatgcgtactggccaagcgttgttcttcctgaaaatcgaacacgctatttttcagata 50371951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 10507759 - 10507717
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcct 273  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  10507759 tcatgcgtagaggtatgcacactggccaaacgttgttcctcct 10507717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 12036794 - 12036852
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||| | ||||||| ||||| |||| ||||| |||||    
T  12036794 tgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaaacccagtatt 12036852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 15466023 - 15465965
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||| |||||| |||| ||||||||| ||| ||||||||||| ||||||    
T  15466023 tgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtatt 15465965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 18915925 - 18915867
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| ||||||||||  |||||||| ||| | ||||||||||||||||    
T  18915925 tgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtatt 18915867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 30927774 - 30927836
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    |||||||||||||||||| || ||||||| |||||||||  || ||||||||||||| |||||    
T  30927774 tcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaacccgatattt 30927836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 32150969 - 32151023
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacc 285  Q
    ||||||||| |||||||||||||| ||||| |||||||| ||| |||||||||||    
T  32150969 tcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaacc 32151023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 33418169 - 33418223
Alignment:
Q  238 tagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||| |||||| || ||||| ||||||| ||||||||    
T  33418169 tagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtatt 33418223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 35908819 - 35908757
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaa-cgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| |||||  |||||||| |||| |||||||| ||||||||    
T  35908819 tcatgcgtagaggcatgcgcactgaccaaagtgttgttccccctaaaaatcgaatccggtatt 35908757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 32932 - 32871
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| | ||||| ||||| ||||    
T  32932 tcatgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcggacccgatatt 32871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 9659226 - 9659286
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| ||||||||||||| | ||||||||||||| ||| | ||||||||||||||||    
T  9659226 tcatgcgtaaaggcatgcgcactagtcaaacgttgttcc-cctgggaatcgaacccggtatt 9659286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 13265999 - 13265938
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||| | ||||||||   ||||| ||||||||| ||||||    
T  13265999 tcatgcgtagaggcatgcgcactggctagacgttgttttccctaggaatcgaaccaggtatt 13265938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 18649404 - 18649469
Alignment:
Q  236 cgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttcagata 301  Q
    |||||||||||||||||||| ||| ||||||||| |||  |||||||||||| |||| | ||||||    
T  18649404 cgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccagata 18649469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 26660199 - 26660138
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||| ||||  |||| |||||||| | | ||||||||||||||||||    
T  26660199 tcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtatt 26660138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 42710147 - 42710248
Alignment:
Q  194 cggttttcgatctactaaaggtgaatgactaat-cgattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| |||||||| || |||| | ||||||| || || |||||||||||||||||||||||||||   ||||| | |||  |||||||||||| ||||    
T  42710147 cggtttccgatctaccaatggtggacgactaattcggtttatgcgtagaggcatgcgcactggccaagtattgtttcccctgaaaatcgaacccgatatt 42710246  T
Q  293 tt 294  Q
    ||    
T  42710247 tt 42710248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 45726449 - 45726541
Alignment:
Q  201 cgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||| || ||||||||| |||||||| |  |||||||||||| ||| ||||||||||||| ||| ||||||||   ||||||||| ||||||    
T  45726449 cgatccaccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaaatgttattcctcctgagaatcgaaccaggtatt 45726541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 50095007 - 50094927
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||| ||| | ||||| |||| | |||||||| || ||||||||||| ||||||| ||||| |||||||||||||    
T  50095007 gcaccggtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaaacgttgttcc 50094927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 14357813 - 14357746
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttcagata 301  Q
    |||||||||||||||||||||| ||||||||||| |   | ||||||||||| | |||||| ||||||    
T  14357813 tgcgtagaggcatgcgcactggtcaaacgttgtttcaattggaaatcgaacctgatattttccagata 14357746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 8764049 - 8763991
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||||||  |||||||| ||| | || |||||||| ||||    
T  8764049 tgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaacccgatatt 8763991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 13262141 - 13262083
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| |||||| | || |||||||||||||  ||| ||||||||||||||||||    
T  13262141 tgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggtatt 13262083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 16956549 - 16956491
Alignment:
Q  210 aaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgtt 267  Q
    |||||||| ||||||||| |  || |||||||||||||||||||||| |||||||||||    
T  16956549 aaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgtt 16956491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 33004065 - 33004123
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||| | ||||| | ||| ||||||||| ||| ||||    
T  33004065 tgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatatt 33004123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 292
Target Start/End: Original strand, 34334353 - 34334403
Alignment:
Q  242 ggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||  |||||||| ||| | ||||||||||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 34334403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 38791657 - 38791703
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaa 277  Q
    ||||||||||||||||||||||| ||||| ||||||| | |||||||    
T  38791657 tcatgcgtagaggcatgcgcacttgccaatcgttgtttcccctagaa 38791703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 50503411 - 50503469
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||| |||  |||||||| ||| | ||||||||||| ||||    
T  50503411 tgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatatt 50503469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 8905281 - 8905314
Alignment:
Q  301 agctccttgtcactagagtccaaacaacttggtt 334  Q
    ||||||||| ||||||||||||||||||||||||    
T  8905281 agctccttgccactagagtccaaacaacttggtt 8905314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 268
Target Start/End: Original strand, 10173018 - 10173055
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttc 268  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  10173018 tcatgcgtagaggcatgggcactggccaagcgttgttc 10173055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 21849255 - 21849307
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccg 287  Q
    |||||||||||||||||||| ||||| ||||||||| ||| | |||||||||||    
T  21849255 tgcgtagaggcatgcgcactagccaagcgttgttcc-cctgggaatcgaacccg 21849307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 26325873 - 26325812
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||| ||||  ||||||||  || | ||||||||||| ||||    
T  26325873 tcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaacccgatatt 26325812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 31734344 - 31734303
Alignment:
Q  236 cgtagaggcatgcgcactggccaaacgttgttcctcctagaa 277  Q
    |||||||||||||||||||||||| ||||||| | |||||||    
T  31734344 cgtagaggcatgcgcactggccaatcgttgtttcccctagaa 31734303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 34697396 - 34697335
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||| |||| |||||  |||||||| ||||  ||||||||| ||||||    
T  34697396 tcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaatcgaacctggtatt 34697335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 42744836 - 42744799
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctc 271  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  42744836 tgcgtagaggcatgctcactggccaagcgttgttcctc 42744799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 15238150 - 15238214
Alignment:
Q  228 gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||| ||||||||||||||| || ||||||| ||||| ||| ||| | ||||||||||| ||||    
T  15238150 gattcgtgcgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaacccgatatt 15238214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 17092482 - 17092586
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    ||||||||||  ||||||| ||||||| | |||||||| |  || ||||||||||||| | |||||||||| ||||||| | |||  ||||||||| ||     
T  17092482 gcaccggtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaactcga 17092581  T
Q  289 tattt 293  Q
    |||||    
T  17092582 tattt 17092586  T

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Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 31576678 - 31576714
Alignment:
Q  301 agctccttgtcactagagtccaaacaacttggttcag 337  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  31576678 agctccttgccactagagcccaaacaacttggttcag 31576714  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 35211219 - 35211275
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccg 287  Q
    ||||||||||||||||||| | |||| || | |||||||| || |||||||||||||    
T  35211219 tcatgcgtagaggcatgcgtattggctaagcattgttccttctggaaatcgaacccg 35211275  T

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Target: scaffold0291 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 6960 - 6857
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccgg 288  Q
    |||||||||| ||| | || ||||||||  |||||||| |  |||||||||||||||||||||||||||||  |||||||| ||| | ||||||||||||    
T  6960 gcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgg 6861  T
Q  289 tatt 292  Q
    ||||    
T  6860 tatt 6857  T

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Target: scaffold0170 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 9905 - 9838
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatttttcagata 301  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||  |||||||    
T  9905 tgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattcctcagata 9838  T

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Target: scaffold0316 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 1660 - 1721
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||||||||||||| || ||||||||| ||| ||||||||||| ||||||    
T  1660 tcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaacctggtatt 1721  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 8747 - 8808
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||| | ||||||||||||||||    
T  8747 tcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 8808  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 319485 - 319424
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||| |||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  319485 tcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaacccggtatt 319424  T

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Target: scaffold0209 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 12636 - 12576
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtattt 293  Q
    ||||||||||||||||||||||||| ||| ||||||||  ||||| |||||||||||||||||    
T  12636 tcatgcgtagaggcatgcgcactggtcaagcgttgttc--cctaggaatcgaacccggtattt 12576  T

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Target: scaffold0376 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 12730 - 12672
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| |||||||||| |||||||||||||   ||||||||||||||||    
T  12730 tgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaacccggtatt 12672  T

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Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 26243 - 26185
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||| |||||||||| ||||||||| ||| |||||||||||| |||||    
T  26243 tgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaacccagtatt 26185  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 95027 - 95086
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| ||||||||||||||| |||||||||||  |||||||||||||||| ||||||    
T  95027 tcatgcgtaaaggcatgcgcactggtcaaacgttgtt--tcctagaaatcgaacctggtatt 95086  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 219474 - 219402
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatcga-ttcatgcgtagaggcatgcgcactggccaaac 261  Q
    |||||||||||||||| |  ||||||| | |||||||| | ||| ||||||||||||||||||||||||||||    
T  219474 gcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaac 219402  T

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Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 271123 - 271181
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||| ||||||||||| |||| ||||||||| ||| | ||||||||||| ||||    
T  271123 tgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatatt 271181  T

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Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 18692 - 18637
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggt 289  Q
    ||||||||| |||| ||||||||||| ||||||||| ||||| |||||||||||||    
T  18692 tgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggt 18637  T

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Target: scaffold0384 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 6035 - 5975
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||| ||||||||||| ||||| ||| ||| |||||||||||| |||||    
T  6035 tcatgcgtagaggcatgtgcactggccaagcgttg-tccccctggaaatcgaacccagtatt 5975  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 25807 - 25884
Alignment:
Q  209 taaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacc 285  Q
    ||||||||  ||||||||| | |||| |||||||| |||||||||||||||| ||||||||  ||||| |||||||||    
T  25807 taaaggtgggtgactaatctggttcacgcgtagagtcatgcgcactggccaagcgttgttctccctaggaatcgaacc 25884  T

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Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 155760 - 155809
Alignment:
Q  234 tgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaa 283  Q
    |||||||||||||||||||| ||||| ||||||||| ||| | |||||||    
T  155760 tgcgtagaggcatgcgcactagccaagcgttgttccccctgggaatcgaa 155809  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 72686 - 72634
Alignment:
Q  240 gaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    |||||||||||||||| ||| ||||||||| | | ||||||||||||||||||    
T  72686 gaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggtatt 72634  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 25190 - 25110
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatc-gattcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||| ||||| || ||||||| | || ||||| ||||||||||||||  ||||||||||| ||||| ||||||||    
T  25190 gcaccggtttccgatccaccaaaggtggacgattaatctgattcatgcgtagaaacatgcgcactgtccaaatgttgttcc 25110  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 65156 - 65236
Alignment:
Q  190 gcaccggttttcgatctactaaaggtgaatgactaatcgat-tcatgcgtagaggcatgcgcactggccaaacgttgttcc 269  Q
    |||||||||| |||||||  ||| ||||  |||||||| |  |||||||||||| |||||||||||||||| |||||||||    
T  65156 gcaccggtttccgatctatcaaaagtgagcgactaatccagctcatgcgtagagacatgcgcactggccaagcgttgttcc 65236  T

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Target: scaffold0079 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 8231 - 8177
Alignment:
Q  237 gtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||||||||||||||||||||| ||||||||| | | | ||||||||||||||||    
T  8231 gtagaggcatgcgcactggccaagcgttgttcc-cttgggaatcgaacccggtatt 8177  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 42878 - 42939
Alignment:
Q  231 tcatgcgtagaggcatgcgcactggccaaacgttgttcctcctagaaatcgaacccggtatt 292  Q
    ||||| |||||||||||||||||| |||| | ||||||  ||||| ||||||||||| ||||    
T  42878 tcatgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaacccgatatt 42939  T

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