View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4638-Insertion-1 (Length: 994)

Name: NF4638-Insertion-1
Description: NF4638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4638-Insertion-1
NF4638-Insertion-1
[»] chr6 (67 HSPs)
chr6 (294-916)||(2359780-2360402)
chr6 (7-285)||(2360916-2361194)
chr6 (707-876)||(2380649-2380821)
chr6 (453-671)||(10298583-10298800)
chr6 (586-678)||(15337516-15337608)
chr6 (454-669)||(22054809-22055024)
chr6 (552-669)||(3623821-3623934)
chr6 (577-665)||(17213917-17214005)
chr6 (556-670)||(4440886-4441000)
chr6 (556-650)||(6563282-6563376)
chr6 (567-653)||(23158032-23158118)
chr6 (556-650)||(32414791-32414885)
chr6 (443-650)||(12226031-12226238)
chr6 (454-665)||(20226308-20226519)
chr6 (454-665)||(22120292-22120503)
chr6 (577-650)||(24624074-24624147)
chr6 (473-660)||(28477799-28477986)
chr6 (473-660)||(29790252-29790439)
chr6 (454-650)||(18668698-18668894)
chr6 (556-650)||(19088070-19088164)
chr6 (454-536)||(21162887-21162969)
chr6 (556-650)||(32671872-32671966)
chr6 (580-665)||(4147972-4148057)
chr6 (556-665)||(15383042-15383151)
chr6 (556-665)||(17257763-17257872)
chr6 (444-529)||(21540629-21540714)
chr6 (556-648)||(1040882-1040974)
chr6 (556-662)||(10520512-10520618)
chr6 (458-536)||(31869906-31869984)
chr6 (567-633)||(5495322-5495389)
chr6 (557-660)||(29693929-29694032)
chr6 (556-650)||(3989376-3989469)
chr6 (556-670)||(24955508-24955622)
chr6 (454-537)||(7048868-7048951)
chr6 (579-642)||(8101664-8101727)
chr6 (590-653)||(31869761-31869824)
chr6 (458-536)||(3623089-3623167)
chr6 (443-529)||(17213791-17213877)
chr6 (444-529)||(3989266-3989350)
chr6 (140-197)||(12622821-12622878)
chr6 (567-624)||(21165188-21165245)
chr6 (552-665)||(21540737-21540850)
chr6 (556-665)||(25475925-25476029)
chr6 (587-659)||(26567287-26567360)
chr6 (140-197)||(34388334-34388391)
chr6 (437-529)||(20437010-20437102)
chr6 (453-529)||(29694060-29694136)
chr6 (454-529)||(32671993-32672068)
chr6 (596-678)||(14214065-14214147)
chr6 (458-532)||(17155323-17155396)
chr6 (553-662)||(24321174-24321284)
chr6 (140-197)||(20427047-20427104)
chr6 (454-527)||(24623951-24624024)
chr6 (140-197)||(34389144-34389201)
chr6 (552-652)||(16661517-16661617)
chr6 (608-660)||(19240756-19240808)
chr6 (567-646)||(1260490-1260569)
chr6 (454-529)||(4148108-4148183)
chr6 (448-536)||(14213965-14214048)
chr6 (138-197)||(24319188-24319246)
chr6 (142-237)||(34484220-34484315)
chr6 (587-629)||(17155226-17155268)
chr6 (444-529)||(17257651-17257736)
chr6 (454-527)||(19087968-19088041)
chr6 (580-633)||(20437149-20437202)
chr6 (596-665)||(31569178-31569247)
chr6 (454-527)||(32414689-32414762)
[»] chr3 (80 HSPs)
chr3 (454-678)||(15332816-15333040)
chr3 (461-670)||(22786666-22786873)
chr3 (461-670)||(22782302-22782509)
chr3 (553-678)||(41252875-41252997)
chr3 (456-665)||(44561825-44562034)
chr3 (556-650)||(13499447-13499541)
chr3 (556-650)||(20765252-20765346)
chr3 (556-650)||(27334843-27334937)
chr3 (556-650)||(33415855-33415949)
chr3 (556-650)||(39866253-39866347)
chr3 (552-678)||(41751518-41751644)
chr3 (556-650)||(42490308-42490402)
chr3 (567-678)||(3430400-3430508)
chr3 (556-668)||(30213842-30213954)
chr3 (454-660)||(36227591-36227797)
chr3 (552-678)||(3020309-3020433)
chr3 (579-650)||(42761618-42761689)
chr3 (556-650)||(21005349-21005443)
chr3 (556-650)||(27010586-27010680)
chr3 (585-678)||(17643759-17643852)
chr3 (552-653)||(41943267-41943368)
chr3 (552-658)||(23940473-23940576)
chr3 (453-529)||(38138002-38138078)
chr3 (454-650)||(6910390-6910586)
chr3 (444-525)||(21083168-21083249)
chr3 (455-532)||(26406018-26406095)
chr3 (455-536)||(47164460-47164541)
chr3 (556-669)||(54507678-54507791)
chr3 (556-644)||(21797618-21797706)
chr3 (552-663)||(30057342-30057453)
chr3 (556-650)||(33803577-33803672)
chr3 (577-644)||(38137886-38137953)
chr3 (459-663)||(48334537-48334739)
chr3 (552-678)||(15568043-15568169)
chr3 (455-529)||(28690425-28690499)
chr3 (556-662)||(52167253-52167359)
chr3 (601-665)||(27813445-27813509)
chr3 (454-529)||(32221010-32221085)
chr3 (587-650)||(44856402-44856465)
chr3 (443-529)||(42345575-42345661)
chr3 (556-669)||(38492163-38492276)
chr3 (556-633)||(43181467-43181544)
chr3 (461-533)||(9492925-9492997)
chr3 (552-652)||(33462758-33462858)
chr3 (454-529)||(25527578-25527653)
chr3 (552-611)||(28562228-28562287)
chr3 (553-669)||(19327442-19327555)
chr3 (556-634)||(28389185-28389263)
chr3 (556-650)||(33128031-33128125)
chr3 (454-532)||(42761493-42761571)
chr3 (556-650)||(43467854-43467948)
chr3 (454-527)||(20765375-20765448)
chr3 (454-527)||(27010484-27010557)
chr3 (444-529)||(43467742-43467827)
chr3 (455-527)||(13499346-13499418)
chr3 (443-527)||(21005472-21005556)
chr3 (454-526)||(23940378-23940450)
chr3 (459-535)||(30174893-30174969)
chr3 (441-509)||(41252764-41252832)
chr3 (457-529)||(43181369-43181441)
chr3 (552-616)||(46418054-46418118)
chr3 (454-529)||(21797733-21797808)
chr3 (454-529)||(33415976-33416051)
chr3 (556-646)||(5504941-5505031)
chr3 (590-660)||(25527450-25527520)
chr3 (556-606)||(32220933-32220983)
chr3 (588-650)||(34912286-34912348)
chr3 (600-653)||(3017844-3017897)
chr3 (446-535)||(3020204-3020293)
chr3 (141-198)||(10950041-10950098)
chr3 (577-610)||(11372887-11372920)
chr3 (460-525)||(20395563-20395628)
chr3 (454-527)||(27334741-27334814)
chr3 (552-649)||(28958905-28959002)
chr3 (454-527)||(39866151-39866224)
chr3 (463-536)||(41750854-41750927)
chr3 (454-527)||(42490206-42490279)
chr3 (612-669)||(43382751-43382807)
chr3 (485-526)||(44802050-44802091)
chr3 (459-516)||(48333592-48333649)
[»] chr2 (63 HSPs)
chr2 (454-665)||(22838937-22839148)
chr2 (579-678)||(11931719-11931818)
chr2 (552-666)||(38291992-38292106)
chr2 (567-678)||(24251988-24252098)
chr2 (454-669)||(44365194-44365409)
chr2 (455-665)||(7799888-7800098)
chr2 (455-633)||(20387261-20387429)
chr2 (455-650)||(9172157-9172352)
chr2 (454-665)||(11841603-11841814)
chr2 (458-665)||(31610677-31610874)
chr2 (556-650)||(5405052-5405146)
chr2 (556-650)||(7608105-7608199)
chr2 (556-650)||(8042134-8042228)
chr2 (556-650)||(19141178-19141272)
chr2 (455-536)||(42133911-42133992)
chr2 (443-527)||(11931844-11931928)
chr2 (552-678)||(44563106-44563232)
chr2 (556-650)||(6223122-6223216)
chr2 (556-650)||(32774647-32774741)
chr2 (580-669)||(16865091-16865180)
chr2 (444-650)||(13125145-13125351)
chr2 (577-669)||(36072211-36072303)
chr2 (552-643)||(38839136-38839227)
chr2 (596-678)||(43444692-43444774)
chr2 (444-529)||(36177580-36177665)
chr2 (577-650)||(39358202-39358275)
chr2 (556-649)||(44644927-44645020)
chr2 (599-678)||(9006939-9007018)
chr2 (576-655)||(13117456-13117535)
chr2 (442-529)||(19165780-19165867)
chr2 (455-529)||(36072351-36072425)
chr2 (596-665)||(19262721-19262790)
chr2 (567-655)||(9553844-9553931)
chr2 (454-660)||(31903890-31904096)
chr2 (454-529)||(33228455-33228530)
chr2 (443-525)||(24093072-24093154)
chr2 (599-665)||(42133793-42133859)
chr2 (596-677)||(7666119-7666200)
chr2 (495-536)||(38840603-38840644)
chr2 (567-669)||(24259484-24259581)
chr2 (552-622)||(34248559-34248626)
chr2 (443-529)||(33607549-33607635)
chr2 (295-345)||(41669799-41669849)
chr2 (552-662)||(45001794-45001904)
chr2 (454-527)||(5405175-5405248)
chr2 (454-527)||(7608228-7608301)
chr2 (454-527)||(19141076-19141149)
chr2 (567-633)||(24607841-24607903)
chr2 (590-650)||(2183103-2183163)
chr2 (143-223)||(7706466-7706546)
chr2 (556-644)||(24283021-24283109)
chr2 (441-529)||(32774769-32774857)
chr2 (556-665)||(33607417-33607522)
chr2 (552-633)||(36177688-36177766)
chr2 (474-529)||(36719354-36719409)
chr2 (554-652)||(2831760-2831858)
chr2 (556-602)||(4045336-4045382)
chr2 (579-633)||(19165918-19165972)
chr2 (579-633)||(24093671-24093724)
chr2 (478-536)||(32887076-32887134)
chr2 (552-634)||(38934940-38935022)
chr2 (454-511)||(16754642-16754699)
chr2 (556-633)||(36931684-36931761)
[»] chr8 (57 HSPs)
chr8 (458-660)||(33700087-33700289)
chr8 (443-644)||(18020928-18021132)
chr8 (443-643)||(18035163-18035361)
chr8 (454-650)||(14237336-14237532)
chr8 (454-665)||(40204732-40204943)
chr8 (455-650)||(41263866-41264061)
chr8 (556-650)||(616839-616933)
chr8 (556-650)||(623232-623326)
chr8 (556-650)||(40494440-40494534)
chr8 (454-650)||(42587258-42587454)
chr8 (556-650)||(2766160-2766254)
chr8 (556-650)||(18044481-18044575)
chr8 (556-650)||(32998506-32998600)
chr8 (552-633)||(9632228-9632309)
chr8 (556-633)||(18090401-18090478)
chr8 (454-648)||(38957228-38957422)
chr8 (454-529)||(24287937-24288012)
chr8 (454-650)||(132073-132269)
chr8 (556-650)||(13216833-13216927)
chr8 (552-622)||(32855570-32855640)
chr8 (455-536)||(9632697-9632778)
chr8 (556-633)||(40716635-40716712)
chr8 (556-648)||(3100607-3100699)
chr8 (556-650)||(36641970-36642065)
chr8 (577-650)||(4270225-4270298)
chr8 (577-650)||(5878372-5878445)
chr8 (579-650)||(3370391-3370462)
chr8 (556-650)||(8394402-8394496)
chr8 (556-660)||(5173297-5173402)
chr8 (556-665)||(6414077-6414186)
chr8 (140-209)||(24570217-24570285)
chr8 (581-634)||(33905465-33905518)
chr8 (567-669)||(21109809-21109906)
chr8 (556-650)||(22489385-22489480)
chr8 (556-647)||(35403575-35403666)
chr8 (556-650)||(11637838-11637932)
chr8 (587-665)||(36919664-36919741)
chr8 (579-633)||(38497145-38497199)
chr8 (454-527)||(623355-623428)
chr8 (562-665)||(11162380-11162479)
chr8 (553-590)||(35303237-35303274)
chr8 (454-527)||(36641868-36641941)
chr8 (556-625)||(38958873-38958942)
chr8 (569-625)||(7430914-7430970)
chr8 (454-529)||(18044602-18044678)
chr8 (553-637)||(34327171-34327255)
chr8 (556-602)||(14522492-14522538)
chr8 (455-529)||(22489285-22489359)
chr8 (456-529)||(4461483-4461556)
chr8 (587-667)||(8181956-8182037)
chr8 (136-197)||(14141841-14141902)
chr8 (136-197)||(14145278-14145339)
chr8 (454-491)||(24730074-24730111)
chr8 (553-602)||(25256442-25256491)
chr8 (480-529)||(32998626-32998675)
chr8 (444-529)||(38958761-38958846)
chr8 (454-527)||(40494563-40494636)
[»] chr7 (93 HSPs)
chr7 (455-644)||(5529073-5529262)
chr7 (454-669)||(3785557-3785772)
chr7 (567-678)||(6766673-6766784)
chr7 (454-649)||(16778562-16778757)
chr7 (455-650)||(20885159-20885354)
chr7 (552-678)||(49101921-49102047)
chr7 (556-665)||(48602477-48602586)
chr7 (577-669)||(16870613-16870705)
chr7 (552-648)||(27045516-27045612)
chr7 (577-660)||(4131636-4131719)
chr7 (552-703)||(49110578-49110724)
chr7 (454-670)||(11502590-11502806)
chr7 (556-650)||(28061627-28061721)
chr7 (556-650)||(36623364-36623458)
chr7 (556-650)||(46479885-46479979)
chr7 (556-650)||(47156083-47156177)
chr7 (556-669)||(7438940-7439053)
chr7 (577-670)||(42877422-42877515)
chr7 (556-665)||(42890455-42890564)
chr7 (443-665)||(32431357-32431579)
chr7 (460-650)||(44732068-44732258)
chr7 (579-650)||(46103505-46103576)
chr7 (455-633)||(24423607-24423780)
chr7 (556-650)||(38851959-38852053)
chr7 (454-650)||(39129936-39130132)
chr7 (556-650)||(40090030-40090124)
chr7 (553-643)||(28601580-28601668)
chr7 (556-665)||(30342115-30342224)
chr7 (577-650)||(40256113-40256186)
chr7 (560-633)||(47525952-47526025)
chr7 (454-650)||(41898044-41898240)
chr7 (556-669)||(35117163-35117275)
chr7 (581-669)||(4048871-4048958)
chr7 (443-527)||(36585841-36585925)
chr7 (459-534)||(37467317-37467392)
chr7 (577-665)||(8683859-8683944)
chr7 (140-197)||(12866622-12866679)
chr7 (552-633)||(35570157-35570238)
chr7 (454-523)||(36516022-36516091)
chr7 (556-669)||(41088624-41088737)
chr7 (586-650)||(7457864-7457928)
chr7 (461-536)||(49101827-49101902)
chr7 (458-624)||(2952532-2952695)
chr7 (454-536)||(6766557-6766639)
chr7 (467-529)||(26161776-26161838)
chr7 (553-627)||(33010275-33010349)
chr7 (579-665)||(36341661-36341747)
chr7 (556-650)||(36585165-36585259)
chr7 (587-653)||(38767202-38767268)
chr7 (444-529)||(3851251-3851336)
chr7 (553-634)||(19120639-19120720)
chr7 (556-633)||(21379817-21379894)
chr7 (140-197)||(24823130-24823187)
chr7 (590-675)||(26161627-26161712)
chr7 (556-669)||(45331949-45332067)
chr7 (578-650)||(3851130-3851202)
chr7 (590-650)||(34750558-34750618)
chr7 (552-660)||(36515885-36515993)
chr7 (580-648)||(37467444-37467511)
chr7 (590-638)||(39278477-39278525)
chr7 (577-629)||(41134621-41134673)
chr7 (457-529)||(42662369-42662441)
chr7 (453-529)||(42877563-42877639)
chr7 (485-536)||(4131547-4131598)
chr7 (140-195)||(4239370-4239425)
chr7 (454-529)||(25566558-25566633)
chr7 (459-526)||(26189805-26189872)
chr7 (460-535)||(38767082-38767157)
chr7 (454-529)||(40256233-40256308)
chr7 (556-650)||(5788489-5788583)
chr7 (590-648)||(7169184-7169242)
chr7 (556-650)||(25566660-25566753)
chr7 (454-532)||(46103380-46103458)
chr7 (443-529)||(46321151-46321237)
chr7 (454-536)||(47525864-47525946)
chr7 (454-527)||(36623487-36623560)
chr7 (454-527)||(47156206-47156279)
chr7 (454-527)||(48602615-48602688)
chr7 (577-633)||(2198675-2198731)
chr7 (552-652)||(38069104-38069204)
chr7 (590-665)||(6174877-6174952)
chr7 (454-529)||(7169300-7169375)
chr7 (454-529)||(7439080-7439155)
chr7 (556-635)||(23707535-23707614)
chr7 (556-611)||(46321264-46321319)
chr7 (586-661)||(46322322-46322397)
chr7 (613-660)||(47096321-47096367)
chr7 (615-665)||(8898612-8898662)
chr7 (628-678)||(26980075-26980125)
chr7 (554-633)||(8656149-8656225)
chr7 (454-527)||(28061525-28061598)
chr7 (454-527)||(38851857-38851930)
chr7 (608-649)||(42662243-42662284)
[»] chr1 (74 HSPs)
chr1 (443-656)||(22575586-22575799)
chr1 (464-665)||(40800407-40800608)
chr1 (459-660)||(15382440-15382642)
chr1 (443-646)||(40977487-40977690)
chr1 (454-650)||(30003589-30003786)
chr1 (556-669)||(3485319-3485432)
chr1 (455-633)||(42735176-42735354)
chr1 (574-665)||(16120570-16120661)
chr1 (559-661)||(9881321-9881423)
chr1 (556-650)||(11641179-11641273)
chr1 (556-650)||(17306010-17306104)
chr1 (556-650)||(36757598-36757692)
chr1 (556-650)||(6402522-6402616)
chr1 (443-529)||(25171330-25171416)
chr1 (454-536)||(27984723-27984805)
chr1 (556-650)||(30701774-30701868)
chr1 (556-650)||(36399154-36399248)
chr1 (556-650)||(42788654-42788748)
chr1 (556-650)||(52024082-52024176)
chr1 (443-650)||(9342644-9342851)
chr1 (556-648)||(40771884-40771976)
chr1 (567-654)||(7568609-7568696)
chr1 (454-648)||(27292698-27292892)
chr1 (590-678)||(30385291-30385379)
chr1 (454-672)||(38153287-38153505)
chr1 (556-648)||(24321317-24321411)
chr1 (443-594)||(31049719-31049867)
chr1 (552-623)||(44452117-44452188)
chr1 (139-197)||(24691-24749)
chr1 (556-650)||(26910132-26910226)
chr1 (454-650)||(42367306-42367502)
chr1 (140-197)||(36976400-36976457)
chr1 (590-650)||(6766428-6766488)
chr1 (453-525)||(15774126-15774198)
chr1 (577-705)||(31444929-31445052)
chr1 (556-658)||(2246663-2246766)
chr1 (454-529)||(40771782-40771857)
chr1 (587-662)||(44647856-44647931)
chr1 (557-668)||(323951-324064)
chr1 (577-665)||(16689865-16689950)
chr1 (587-665)||(28030824-28030902)
chr1 (495-536)||(3485259-3485300)
chr1 (140-197)||(15724298-15724355)
chr1 (553-703)||(27984564-27984705)
chr1 (567-650)||(15912459-15912542)
chr1 (454-529)||(16120449-16120524)
chr1 (454-529)||(36399275-36399350)
chr1 (599-662)||(44644510-44644573)
chr1 (454-525)||(44647723-44647794)
chr1 (139-209)||(15857947-15858017)
chr1 (458-536)||(31445085-31445163)
chr1 (596-658)||(34634955-34635017)
chr1 (581-663)||(48375045-48375127)
chr1 (575-660)||(5068806-5068891)
chr1 (454-527)||(6402420-6402493)
chr1 (485-526)||(6406020-6406061)
chr1 (456-529)||(9881453-9881526)
chr1 (454-527)||(11641077-11641150)
chr1 (581-662)||(14777076-14777157)
chr1 (140-253)||(30095802-30095915)
chr1 (454-527)||(36757496-36757569)
chr1 (581-650)||(50972771-50972840)
chr1 (613-653)||(6406121-6406161)
chr1 (582-662)||(15774413-15774493)
chr1 (593-633)||(25695473-25695513)
chr1 (486-533)||(7268718-7268765)
chr1 (556-627)||(38737456-38737527)
chr1 (454-529)||(52024203-52024278)
chr1 (556-598)||(23435671-23435713)
chr1 (556-602)||(23569777-23569823)
chr1 (552-602)||(41501710-41501760)
chr1 (455-529)||(50972643-50972717)
chr1 (454-527)||(17306133-17306206)
chr1 (579-620)||(25171240-25171281)
[»] chr5 (62 HSPs)
chr5 (443-633)||(12359821-12360010)
chr5 (552-670)||(6996017-6996134)
chr5 (556-660)||(3422322-3422429)
chr5 (552-666)||(18998727-18998841)
chr5 (556-650)||(8086142-8086236)
chr5 (556-650)||(14634269-14634363)
chr5 (556-650)||(33387276-33387370)
chr5 (556-665)||(9502739-9502848)
chr5 (556-650)||(978133-978227)
chr5 (454-665)||(18094091-18094302)
chr5 (552-665)||(24992246-24992359)
chr5 (454-665)||(33587479-33587690)
chr5 (556-668)||(5947666-5947775)
chr5 (454-650)||(7224221-7224417)
chr5 (556-678)||(12456752-12456874)
chr5 (589-678)||(32017241-32017330)
chr5 (443-669)||(27109726-27109951)
chr5 (494-647)||(11761125-11761277)
chr5 (552-660)||(24916354-24916464)
chr5 (444-650)||(40156254-40156462)
chr5 (577-650)||(27579563-27579636)
chr5 (578-650)||(3472411-3472483)
chr5 (567-669)||(2825244-2825347)
chr5 (579-650)||(12007767-12007838)
chr5 (581-652)||(31197827-31197898)
chr5 (445-536)||(36239917-36240008)
chr5 (552-625)||(7749845-7749918)
chr5 (556-633)||(9050688-9050765)
chr5 (552-649)||(26386988-26387084)
chr5 (556-669)||(30354986-30355099)
chr5 (577-633)||(32400400-32400456)
chr5 (579-667)||(38916385-38916473)
chr5 (605-672)||(35824996-35825063)
chr5 (454-529)||(38916263-38916338)
chr5 (451-529)||(18598709-18598787)
chr5 (590-660)||(39776676-39776746)
chr5 (556-668)||(17354229-17354340)
chr5 (552-632)||(43196296-43196376)
chr5 (552-599)||(898409-898456)
chr5 (600-671)||(4671244-4671315)
chr5 (458-529)||(11251291-11251362)
chr5 (455-530)||(12446878-12446953)
chr5 (556-647)||(35641827-35641918)
chr5 (556-650)||(11251170-11251264)
chr5 (577-650)||(11785858-11785932)
chr5 (577-650)||(12447551-12447622)
chr5 (466-536)||(26386903-26386973)
chr5 (556-602)||(30779849-30779895)
chr5 (140-222)||(35371705-35371787)
chr5 (454-527)||(978256-978329)
chr5 (454-527)||(9502637-9502710)
chr5 (454-527)||(14634167-14634240)
chr5 (454-527)||(33387398-33387471)
chr5 (608-677)||(37495639-37495708)
chr5 (453-529)||(7002517-7002593)
chr5 (160-208)||(20858123-20858171)
chr5 (454-529)||(34112134-34112209)
chr5 (163-197)||(26267548-26267582)
chr5 (596-650)||(34112018-34112072)
chr5 (140-197)||(29518496-29518553)
chr5 (458-511)||(32020225-32020278)
chr5 (608-665)||(36240095-36240152)
[»] chr4 (106 HSPs)
chr4 (454-650)||(7614671-7614867)
chr4 (458-665)||(20875261-20875468)
chr4 (454-638)||(19433368-19433552)
chr4 (552-678)||(29585953-29586078)
chr4 (552-660)||(50685304-50685414)
chr4 (556-669)||(12625288-12625401)
chr4 (556-669)||(26125745-26125858)
chr4 (552-633)||(10550499-10550577)
chr4 (454-665)||(12240187-12240399)
chr4 (556-650)||(29830399-29830493)
chr4 (556-670)||(31010250-31010364)
chr4 (556-650)||(43967779-43967873)
chr4 (556-650)||(44232189-44232283)
chr4 (454-665)||(17446643-17446854)
chr4 (577-670)||(30446334-30446426)
chr4 (556-665)||(55191865-55191974)
chr4 (556-672)||(2570994-2571110)
chr4 (581-669)||(36523105-36523193)
chr4 (556-648)||(55209686-55209778)
chr4 (577-660)||(3037026-3037109)
chr4 (552-659)||(19903758-19903865)
chr4 (579-650)||(38416785-38416856)
chr4 (454-536)||(4455463-4455545)
chr4 (454-650)||(4467530-4467725)
chr4 (567-653)||(14144580-14144666)
chr4 (556-650)||(25296692-25296786)
chr4 (583-665)||(35381033-35381115)
chr4 (556-650)||(45291888-45291982)
chr4 (556-670)||(50205779-50205893)
chr4 (556-650)||(54330802-54330896)
chr4 (577-663)||(56297835-56297921)
chr4 (441-652)||(9029446-9029657)
chr4 (552-669)||(19533931-19534048)
chr4 (463-536)||(29052230-29052303)
chr4 (577-650)||(47386419-47386492)
chr4 (556-648)||(26170044-26170136)
chr4 (556-660)||(39307742-39307846)
chr4 (553-633)||(55091296-55091376)
chr4 (556-660)||(27407729-27407835)
chr4 (556-650)||(37767070-37767164)
chr4 (556-669)||(17610317-17610430)
chr4 (552-672)||(22197797-22197916)
chr4 (577-669)||(50620815-50620907)
chr4 (454-529)||(26170164-26170239)
chr4 (596-678)||(29051712-29051792)
chr4 (456-525)||(34316885-34316954)
chr4 (567-669)||(51355161-51355265)
chr4 (590-650)||(2760873-2760933)
chr4 (556-652)||(35064089-35064184)
chr4 (454-529)||(25296589-25296664)
chr4 (586-665)||(35686414-35686493)
chr4 (454-529)||(35686584-35686659)
chr4 (556-650)||(38716942-38717039)
chr4 (587-662)||(38721381-38721456)
chr4 (579-669)||(19595742-19595832)
chr4 (454-532)||(19897795-19897873)
chr4 (579-633)||(27344083-27344137)
chr4 (443-529)||(47386285-47386371)
chr4 (455-521)||(52227238-52227304)
chr4 (556-633)||(25918276-25918353)
chr4 (444-529)||(32364332-32364417)
chr4 (140-197)||(50394225-50394282)
chr4 (460-529)||(51355053-51355122)
chr4 (587-671)||(56080017-56080102)
chr4 (453-529)||(5428753-5428829)
chr4 (552-624)||(30191581-30191653)
chr4 (141-197)||(48747315-48747371)
chr4 (587-663)||(27755762-27755842)
chr4 (447-534)||(29585843-29585930)
chr4 (454-529)||(54330700-54330775)
chr4 (454-509)||(55091219-55091274)
chr4 (567-669)||(5472074-5472176)
chr4 (147-197)||(21556045-21556095)
chr4 (459-529)||(32871375-32871445)
chr4 (556-661)||(50815006-50815112)
chr4 (444-526)||(55800979-55801061)
chr4 (454-527)||(2760740-2760813)
chr4 (499-536)||(25633446-25633483)
chr4 (443-528)||(30446479-30446564)
chr4 (454-527)||(38416660-38416733)
chr4 (454-527)||(44232087-44232160)
chr4 (552-633)||(53241891-53241972)
chr4 (552-652)||(4271924-4272024)
chr4 (552-624)||(11794637-11794709)
chr4 (454-529)||(12625428-12625503)
chr4 (142-193)||(12879627-12879678)
chr4 (454-529)||(17610457-17610532)
chr4 (486-529)||(27755899-27755942)
chr4 (590-665)||(34316562-34316636)
chr4 (454-529)||(38721514-38721589)
chr4 (444-527)||(43967902-43967985)
chr4 (556-651)||(50181115-50181210)
chr4 (590-653)||(53304478-53304541)
chr4 (454-529)||(55192001-55192076)
chr4 (599-650)||(55800890-55800941)
chr4 (454-524)||(26125890-26125960)
chr4 (552-630)||(30867320-30867398)
chr4 (579-633)||(32871494-32871548)
chr4 (454-532)||(35380904-35380982)
chr4 (455-529)||(41955512-41955585)
chr4 (494-536)||(50685246-50685288)
chr4 (596-634)||(51456506-51456544)
chr4 (556-602)||(55190817-55190863)
chr4 (556-611)||(25633374-25633426)
chr4 (454-527)||(45292011-45292084)
chr4 (454-527)||(55209584-55209657)
[»] scaffold0225 (1 HSPs)
scaffold0225 (577-678)||(8966-9067)
[»] scaffold0029 (1 HSPs)
scaffold0029 (577-678)||(138163-138264)
[»] scaffold0262 (1 HSPs)
scaffold0262 (567-678)||(22808-22919)
[»] scaffold0022 (1 HSPs)
scaffold0022 (454-650)||(100657-100853)
[»] scaffold0018 (2 HSPs)
scaffold0018 (556-665)||(67881-67990)
scaffold0018 (444-529)||(67770-67855)
[»] scaffold0595 (1 HSPs)
scaffold0595 (554-660)||(3994-4101)
[»] scaffold0009 (2 HSPs)
scaffold0009 (460-633)||(216889-217064)
scaffold0009 (556-651)||(53532-53627)
[»] scaffold0295 (1 HSPs)
scaffold0295 (577-650)||(13850-13923)
[»] scaffold0099 (1 HSPs)
scaffold0099 (577-660)||(28784-28868)
[»] scaffold0056 (2 HSPs)
scaffold0056 (577-669)||(70998-71089)
scaffold0056 (443-523)||(71143-71223)
[»] scaffold0003 (2 HSPs)
scaffold0003 (579-650)||(161972-162043)
scaffold0003 (454-529)||(161847-161922)
[»] scaffold0002 (1 HSPs)
scaffold0002 (567-669)||(315625-315722)
[»] scaffold0330 (1 HSPs)
scaffold0330 (140-197)||(1879-1936)
[»] scaffold0608 (1 HSPs)
scaffold0608 (556-651)||(1575-1670)


Alignment Details
Target: chr6 (Bit Score: 509; Significance: 0; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 294 - 916
Target Start/End: Complemental strand, 2360402 - 2359780
Alignment:
Q  294 caacgttcggaaaagtatgaccagaagtatcttatgaagcctcatgtttctacttgagacaaaaggagaggatcaacccatacctattctaatgttgaaa 393  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2360402 caacgttcggaaaagtatgaccagaagtattttatgaagcctcatgtttctacttgagacaaaaggagaggatcaacccatacctattctaatgttgaaa 2360303  T
Q  394 acatgctttcaaacgatatacaaccgacaatttagtcgtggcttgacacatactccatttgtttcaaaatacatgtcacagtcaatcactacacacatga 493  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2360302 acatgctttcaaacgatatacaaccgacagtttagtcgtggcttgacacatactccatttgtttcaaaatacatgtcacagtcaaccactacacacatga 2360203  T
Q  494 caatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaaca 593  Q
    ||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||||    
T  2360202 caatacacaactttgaccgttaatatctttaattatatataatgaaaaaaataaaaaatttgatattttaaacatattcatcaagacaaatcaaacaaca 2360103  T
Q  594 ttttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaattgatttgtgacatgtat 693  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| | || |||||| ||||||||||||||||||||    
T  2360102 ttttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaaattatataaatagtacacattatataattgatttgtgacatgtat 2360003  T
Q  694 tttaaaacggttagtatgtccttcaaaggacgacaatgatgaactcatactcagatggcaatgtgctcccacggtggaggcatgacattggtagttacac 793  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2360002 tttgaaacggtgagtatgtccttcaaaggacgacaatgatgaactcgtactcagatggcaatgtgcttccacggtggaggcatgacattggtagttacac 2359903  T
Q  794 atttaatggttcgtacattcatgtgactctatattattcaacatggcccatgcttgagatatttattcattcatctcatttgattattgggtagtgttta 893  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |    
T  2359902 atttaatggttcgtacattcatgtgactctatattattcaacatggcccatgcttgagatatttattcattcatcttatttgattattaggtagtgttaa 2359803  T
Q  894 cttgtgttcctagagtacatgtt 916  Q
    ||||||||| ||||| |||||||    
T  2359802 cttgtgttcttagagcacatgtt 2359780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 2361194 - 2360916
Alignment:
Q  7 attattatcatggaaatttattgtatgtgtaaatgtgaataatttaactgtttatttataatatatatttaaaacatatagagacaggcaagtcagaaac 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2361194 attattatcatggaaatttattgtatgtgtaaatgtgaataatttaactgtttatttataatatatatttaaaacgtatagagacaggcaagtcagaaac 2361095  T
Q  107 aagatatgcatgtatatcaaattcaaactcccctgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaagagcatctc 206  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2361094 aagatatgcatgtatatcaaatacaaactccactgatgactaaatttgtcaagtgcaccaaaccgttttcaagtaataaagtagtaagtaagagcatctc 2360995  T
Q  207 cactgaggttgtcgttttaactcggaaactagcgttatctattaaaacaacaaataaaatgctataaaatatacaaaag 285  Q
     ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  2360994 tactaaggttgtcgttttaactcggaaactagcgttatttattaaaacaacaaataaaatgctataaaatatataaaag 2360916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 707 - 876
Target Start/End: Complemental strand, 2380821 - 2380649
Alignment:
Q  707 gtatgtccttcaaaggacgacaatgatgaactcatactcagatggcaatgtgctcccacg---gtggaggcatgacattggtagttacacatttaatggt 803  Q
    |||||||||||||||||  | ||||||||  |  || | ||||||||||||| | ||||    ||||||||||  ||||||| |||||| |||| |||||    
T  2380821 gtatgtccttcaaaggatcaaaatgatgatgttgtattgagatggcaatgtgttgccacttatgtggaggcatatcattggttgttacatattttatggt 2380722  T
Q  804 tcgtacattcatgtgactctatattattcaacatggcccatgcttgagatatttattcattcatctcatttga 876  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2380721 tcgtccattcatgtgactctaaattattcaacatggcccatgcttgagatatttattcattcatttcatttga 2380649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 453 - 671
Target Start/End: Original strand, 10298583 - 10298800
Alignment:
Q  453 tgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnnt 552  Q
    |||| ||||||||||||| ||||||| ||||  ||||||| |||||||||||||||||| ||||||| ||||||||| ||||||               |    
T  10298583 tgttccaaaatacatgtcgcagtcaaccactgtacacatgccaatacacaactttgaccattaatat-tttaattatgtataataaaaaattataaaaat 10298681  T
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtta 652  Q
    ||||||| || || |||||| || ||| |||||||| |||||||||||||||||||||| ||||||||||||||| ||||| ||| |||||| |||| ||    
T  10298682 ttgatatgttgaaaatattcctcgagaaaaatcaaaaaacattttacatgctaacatttgtatttatatattagtgaaaaaatatggtcaaattaagcta 10298781  T
Q  653 tatgaataatgcatattat 671  Q
    | |||||| |||| |||||    
T  10298782 tgtgaatagtgcacattat 10298800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 586 - 678
Target Start/End: Complemental strand, 15337608 - 15337516
Alignment:
Q  586 aaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaattg 678  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| || |||||    
T  15337608 aaacaacattttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaattg 15337516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 454 - 669
Target Start/End: Complemental strand, 22055024 - 22054809
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  ||||||||||| |||| ||| |||| || || ||||||||||||||||||||||||| || | |               ||    
T  22055024 gtttcaaaatacatgtccaagtcaatcacttcacatatgccaatgcataattttgaccgttaatatctttaattatctaaagtaaaaaattatgaaaatt 22054925  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| |     
T  22054924 taatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaa 22054825  T
Q  654 atgaataatgcatatt 669  Q
     |||||| ||||||||    
T  22054824 gtgaatagtgcatatt 22054809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 552 - 669
Target Start/End: Original strand, 3623821 - 3623934
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||||||||| ||||||||  |||||||||||||| |   |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||  |    
T  3623821 tttgatattttaaaaatattcattgagacaaatcaaacatc---ttacatgctaacatttgtatttatatattagttaaaaa-tatggtcaaagtaaact 3623916  T
Q  652 atatgaataatgcatatt 669  Q
    |||||||||||| |||||    
T  3623917 atatgaataatgtatatt 3623934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 577 - 665
Target Start/End: Original strand, 17213917 - 17214005
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| |||||||||||||||| | ||||||| ||||    
T  17213917 agacaaatcaaacaacatcttacatgctaatatttgtatttataaattagttaaaaagtatagtcaaagtaagtcaaatgaatagtgca 17214005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 670
Target Start/End: Complemental strand, 4441000 - 4440886
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||| | ||||| ||| | ||||||| |||||||| |||||||||||||||| ||||||||| |||  |||||| ||| |||||||||||||||||    
T  4441000 atattttataaatatttatcgaaacaaatcgaacaacatcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaagttatat 4440901  T
Q  656 gaataatgcatatta 670  Q
    ||||| |||| ||||    
T  4440900 gaatagtgcacatta 4440886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 6563376 - 6563282
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  6563376 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 6563282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 567 - 653
Target Start/End: Original strand, 23158032 - 23158118
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    ||||||||  |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| | | |||||||||||||||    
T  23158032 atattcattgagacaaatcaaacaacatcttacatgttaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttat 23158118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 32414791 - 32414885
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  32414791 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 32414885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 443 - 650
Target Start/End: Complemental strand, 12226238 - 12226031
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnn 542  Q
    |||||||||  |||| ||||||||||||  |||||| |||| |||||||| |||||||||| ||||| ||||||||||||||||||| || | |          
T  12226238 atactccatccgttttaaaatacatgtccaagtcaaccacttcacacatgccaatacacaattttgatcgttaatatctttaattatctaaagtaaaaaa 12226139  T
Q  543 nnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtca 642  Q
             ||| ||||||| || ||||| ||| ||||||||||||||| || ||||||||||| |||| |||||||| |||||||||||| |||  |||    
T  12226138 ttataaaaatttaatattttgaaaatatttatcgagacaaatcaaacaatatcttacatgctaatatttatatttatacattagttaaaaagtatgatca 12226039  T
Q  643 aagtaagt 650  Q
    || |||||    
T  12226038 aaataagt 12226031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 454 - 665
Target Start/End: Original strand, 20226308 - 20226519
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||| |||||| |||| |||| ||| |||| ||||| ||| ||||||||||||||||||||| ||   |               ||    
T  20226308 gtttcaaaatacatgtcaaagtcaaccacttcacatatgccaatgcacaatttttaccgttaatatctttaattatttaatgtaaaaaattataaaaatt 20226407  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | ||||||| || |||||  || |||||||||||||||| | ||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| |     
T  20226408 taatattttgaaaatatttgtcgagacaaatcaaacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaa 20226507  T
Q  654 atgaataatgca 665  Q
    ||||||| ||||    
T  20226508 atgaatagtgca 20226519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 454 - 665
Target Start/End: Original strand, 22120292 - 22120503
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||| |||||| |||| |||| ||| |||| ||||| ||| ||||||||||||||||||||| ||   |               ||    
T  22120292 gtttcaaaatacatgtcaaagtcaaccacttcacatatgccaatgcacaatttttaccgttaatatctttaattatttaatgtaaaaaattataaaaatt 22120391  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | ||||||| || |||||  || |||||||||||||||| | ||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| |     
T  22120392 taatattttgaaaatatttgtcgagacaaatcaaacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaa 22120491  T
Q  654 atgaataatgca 665  Q
    ||||||| ||||    
T  22120492 atgaatagtgca 22120503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 577 - 650
Target Start/End: Original strand, 24624074 - 24624147
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  24624074 agacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 24624147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 473 - 660
Target Start/End: Complemental strand, 28477986 - 28477799
Alignment:
Q  473 agtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgatattttaaacatattc 572  Q
    ||||||||||| |||| ||| |||| ||||||||||||||||||||||||||||||| || | |               ||| ||||||| || |||||     
T  28477986 agtcaatcacttcacatatgtcaatgcacaactttgaccgttaatatctttaattatctaaagtaaaaaattgtaaaaatttaatattttgaatatattt 28477887  T
Q  573 atcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    ||| | | |||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||| || ||||||    
T  28477886 atcgatataaatcaaacaacaacttacatgctaatatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaata 28477799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 473 - 660
Target Start/End: Complemental strand, 29790439 - 29790252
Alignment:
Q  473 agtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgatattttaaacatattc 572  Q
    ||||||||||| |||| ||| |||| ||||||||||||||||||||||||||||||| || | |               ||| ||||||| || |||||     
T  29790439 agtcaatcacttcacatatgtcaatgcacaactttgaccgttaatatctttaattatctaaagtaaaaaattgtaaaaatttaatattttgaatatattt 29790340  T
Q  573 atcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    ||| | | |||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||| || ||||||    
T  29790339 atcgatataaatcaaacaacaacttacatgctaatatttgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaata 29790252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 454 - 650
Target Start/End: Original strand, 18668698 - 18668894
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  |||||| |||| || | ||| |||| ||||| ||||||||||||||||||||||||| || | |               ||    
T  18668698 gtttcaaaatacatgtccaagtcaaccacttcatatatgccaatgcacaattttgaccgttaatatctttaattatctaaagtaaaaaattataaaaatt 18668797  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||| ||||    
T  18668798 taatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagcaagt 18668894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 19088070 - 19088164
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| | | ||||||||||||    
T  19088070 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagt 19088164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 454 - 536
Target Start/End: Original strand, 21162887 - 21162969
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||||||||||||||  ||| |||||| |||||||||  ||||||||||||||| ||||||||| ||||||||||||||||    
T  21162887 gtttcaaaatacatgtcgtagttaatcaccacacacatgttaatacacaactttgatcgttaatatatttaattatatataat 21162969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 32671966 - 32671872
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||| ||||| |||| |||||||| |||||||||||||||| ||||||||||||    
T  32671966 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagt 32671872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 580 - 665
Target Start/End: Complemental strand, 4148057 - 4147972
Alignment:
Q  580 caaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| |  |||||||||||    
T  4148057 caaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgca 4147972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 15383042 - 15383151
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || ||| |||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| || ||||||||| | ||    
T  15383042 atattttgaaaatatttgtcgagaaaaatcaaacaacatcttacatgctaatatttgtatttatagattagttaaaaagtatggttaaagtaagtcaaat 15383141  T
Q  656 gaataatgca 665  Q
    ||||||||||    
T  15383142 gaataatgca 15383151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 17257763 - 17257872
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||| || |||||||||||| ||| |||||||||||| |  |    
T  17257763 atattttgaaaatatttgtctagacaaatcaaacaacatcttacatgctaatatttgtatttgtacattagttaaaaagtatggtcaaagtaagtcaagt 17257862  T
Q  656 gaataatgca 665  Q
    ||||||||||    
T  17257863 gaataatgca 17257872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 444 - 529
Target Start/End: Original strand, 21540629 - 21540714
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||| | ||||||||||||||||||  |||||| |||| |||||||| |||| ||||| |||||||||||||||||||||||||    
T  21540629 tactccttctgtttcaaaatacatgtccaagtcaaccacttcacacatgccaatgcacaattttgaccgttaatatctttaattat 21540714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 556 - 648
Target Start/End: Complemental strand, 1040974 - 1040882
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaa 648  Q
    |||||||||| |||||  || |||||||||||||||||| ||||||| ||| |||| |||||||| |||||||||||| ||| ||||||||||    
T  1040974 atattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaa 1040882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 556 - 662
Target Start/End: Complemental strand, 10520618 - 10520512
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||  ||| || | |||||||| ||||||||| |  ||| |||||||||||| | ||    
T  10520618 atattttaaaaatatttatcgagacaaatcaaacaacattttacatattaatatctgtatttatacattagttaataggtatggtcaaagtaagtcaaat 10520519  T
Q  656 gaataat 662  Q
    |||||||    
T  10520518 gaataat 10520512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 458 - 536
Target Start/End: Complemental strand, 31869984 - 31869906
Alignment:
Q  458 caaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||||||||||| |||||  ||| ||||||||| |||||||||| ||||||  ||||||||||||||||||||||||    
T  31869984 caaaatacatgtcagagtcatccaccacacacatgtcaatacacaattttgactattaatatctttaattatatataat 31869906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 567 - 633
Target Start/End: Complemental strand, 5495389 - 5495322
Alignment:
Q  567 atattcatcaagacaaa-tcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||||| ||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||    
T  5495389 atattcatcgagacaaaatcaaacaaaatcttacatgctaacatttgtatttatatattagttaaaaa 5495322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 557 - 660
Target Start/End: Complemental strand, 29694032 - 29693929
Alignment:
Q  557 tattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatg 656  Q
    |||||| || ||||| ||| | ||||||||| |||||  ||||||||||  |||| ||||||||||||||||||||||||| ||||||| |||| || ||    
T  29694032 tattttgaatatatttatcgatacaaatcaagcaacaacttacatgctagtatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtg 29693933  T
Q  657 aata 660  Q
    ||||    
T  29693932 aata 29693929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 3989376 - 3989469
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| |||||  || |||||||||||||||||| ||||||||||| | || |||||| | |||||||||||| ||| ||||||||||||    
T  3989376 atattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatagttgtattta-acattagttaaaaagtatggtcaaagtaagt 3989469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 556 - 670
Target Start/End: Original strand, 24955508 - 24955622
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||  |||||||||||| |||  ||||| ||||| |  |    
T  24955508 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatgatcaaaataagtcaagt 24955607  T
Q  656 gaataatgcatatta 670  Q
    |||||||||| ||||    
T  24955608 gaataatgcacatta 24955622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 454 - 537
Target Start/End: Original strand, 7048868 - 7048951
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatg 537  Q
    ||||||||||||||||| ||||| || |||| | |||||  ||||||||||||||| | ||||||||||||||  |||||||||    
T  7048868 gtttcaaaatacatgtcgcagtcgattactatatacatgttaatacacaactttgatcattaatatctttaatggtatataatg 7048951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 579 - 642
Target Start/End: Complemental strand, 8101727 - 8101664
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtca 642  Q
    |||||||||| ||||| ||||||| |||||||| ||||||||||||||||||||| ||| ||||    
T  8101727 acaaatcaaataacatcttacatgttaacatttgtatttatatattagttaaaaaatatggtca 8101664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 590 - 653
Target Start/End: Complemental strand, 31869824 - 31869761
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    ||||| |||||||||||||||| |||||||||||||||||||||  || |||||||||| ||||    
T  31869824 aacatcttacatgctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattat 31869761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 458 - 536
Target Start/End: Original strand, 3623089 - 3623167
Alignment:
Q  458 caaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||||||||||  |||||| | | ||||||||| ||||||| |||||||| | ||||||| ||||||||||||||||    
T  3623089 caaaatacatgtcgtagtcaaccgcaacacacatgtcaatacataactttgatcattaatatatttaattatatataat 3623167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 443 - 529
Target Start/End: Original strand, 17213791 - 17213877
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||| |||||||||||||| |||  |||||| || | |||| ||| |||| ||||| ||| |||||||||||||||||||||    
T  17213791 atactccatctgtttcaaaatacacgtctaagtcaaccatttcacatatgccaatgcacaattttaaccgttaatatctttaattat 17213877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 444 - 529
Target Start/End: Original strand, 3989266 - 3989350
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||| ||||||||||||||||||  | ||||||||| || | ||| ||||| |||| ||||| |||||||||||||||||||    
T  3989266 tactccatctgtttcaaaatacatgtccaaatcaatcacttcatatatgtcaata-acaattttgatcgttaatatctttaattat 3989350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 12622821 - 12622878
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||||||||||||| ||| || | |||||||||||||||||||||||| ||||||||    
T  12622821 tgatgactaaatttgacaagtgaaacaaaccgttttcaagtaataaagtggtaagtaa 12622878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 567 - 624
Target Start/End: Original strand, 21165188 - 21165245
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatatt 624  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||| ||||||||||||    
T  21165188 atattcatcaagacaaataaaaaaacatcttacattctaacatttgtatttatatatt 21165245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 665
Target Start/End: Original strand, 21540737 - 21540850
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||| ||||||| || |||||  || |||||||||||| ||||||||||||  ||| |||| |||||||| | ||||| |||| ||| ||||||||||||     
T  21540737 tttaatattttgaaaatatttgtcgagacaaatcaaataacattttacattataatatttgtatttataaactagtttaaaagtatggtcaaagtaagtc 21540836  T
Q  652 atatgaataatgca 665  Q
    | ||||||| ||||    
T  21540837 aaatgaatagtgca 21540850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 25475925 - 25476029
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||||||||||||| |||||||||||     ||||||||| |||||||||||| ||  |||||||||||| |  |    
T  25475925 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaa-----ttatttatacattagttaaaaagtaaggtcaaagtaagtcaagt 25476019  T
Q  656 gaataatgca 665  Q
    ||||||||||    
T  25476020 gaataatgca 25476029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 587 - 659
Target Start/End: Original strand, 26567287 - 26567360
Alignment:
Q  587 aacaacattttacatgctaacatttttatttatatattagtt-aaaaattatagtcaaagtaagttatatgaat 659  Q
    |||||| |||||||||||| ||||| |||||||||||||||| ||||| |||  ||||||||||||||| ||||    
T  26567287 aacaacgttttacatgctaccatttatatttatatattagttaaaaaaatatgatcaaagtaagttatacgaat 26567360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 34388334 - 34388391
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||||||||||| | ||| |||||| ||||||||||||||||||||||| |||||||    
T  34388334 tgatgactaaattcggcaagtgcacctaaccgttttcaagtaataaagtaataagtaa 34388391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 437 - 529
Target Start/End: Original strand, 20437010 - 20437102
Alignment:
Q  437 tgacacatactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||| ||||||| |  |||||||||||||||||  |||||| |||| |||| ||| |||| || || ||| |||||||||||||||||||||    
T  20437010 tgacatatactccctccgtttcaaaatacatgtccaagtcaaccacttcacatatgtcaatgcataattttaaccgttaatatctttaattat 20437102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 29694136 - 29694060
Alignment:
Q  453 tgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||||  ||||||||||| |||| ||| || | || |||||||||| ||||||| |||||||||    
T  29694136 tgtttcaaaatacatgtcgtagtcaatcacttcacatatgtcagtgcataactttgaccattaatatatttaattat 29694060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 32672068 - 32671993
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||||  ||||||  ||| |||| ||| |||| ||||| ||||| |||||||||||||||||||    
T  32672068 gtttcaaaatacatgtccaagtcaacaacttcacatatgccaatgcacaattttgatcgttaatatctttaattat 32671993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 596 - 678
Target Start/End: Original strand, 14214065 - 14214147
Alignment:
Q  596 ttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaattg 678  Q
    |||||||||||||||| |||||||||||| |||||||| ||  ||||||  ||||   |||||||||||| |||||| |||||    
T  14214065 ttacatgctaacatttatatttatatattggttaaaaaatacggtcaaaacaagtcggatgaataatgcacattataaaattg 14214147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 458 - 532
Target Start/End: Complemental strand, 17155396 - 17155323
Alignment:
Q  458 caaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatata 532  Q
    ||||||||||| | ||||||| |||| ||||||||  |||  |||||||||||||||||||||||||| ||||||    
T  17155396 caaaatacatg-cgcagtcaaccacttcacacatgcaaatgtacaactttgaccgttaatatctttaaatatata 17155323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 553 - 662
Target Start/End: Original strand, 24321174 - 24321284
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagtt-aaaaattatagtcaaagtaagtt 651  Q
    |||| |||| ||| ||||||||  ||| |||||||||||||| ||  || |||| |||| | ||||||||| |||| ||||| ||| ||||||||||| |    
T  24321174 ttgacatttaaaaaatattcattgagaaaaatcaaacaacatcttgtatactaaaatttgtctttatatatcagttaaaaaaatatggtcaaagtaagat 24321273  T
Q  652 atatgaataat 662  Q
    |||||||||||    
T  24321274 atatgaataat 24321284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 20427104 - 20427047
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    |||| |||||||||||||| |||| |||||| ||||||| |||||||||| |||||||    
T  20427104 tgataactaaatttgtcaagtgcatcaaaccattttcaaataataaagtactaagtaa 20427047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 24623951 - 24624024
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  24623951 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 24624024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 34389144 - 34389201
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    |||||| |||||||| ||| ||||| |||||||||| ||||||| |||||||||||||    
T  34389144 tgatgattaaatttggcaagtgcacgaaaccgttttaaagtaattaagtagtaagtaa 34389201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 16661517 - 16661617
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||||||||| ||| ||||||| ||||||| ||| |||| ||| ||| ||  |||| | |||||||||||||  |||| ||  |||||||||||||    
T  16661517 tttgatattttaaaaatactcatcaaaacaaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatacggtcaaagtaagtt 16661616  T
Q  652 a 652  Q
    |    
T  16661617 a 16661617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 19240756 - 19240808
Alignment:
Q  608 atttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    |||| ||||||||||||||||||||| ||| |||||| |||||||| ||||||    
T  19240756 atttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaata 19240808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 646
Target Start/End: Complemental strand, 1260569 - 1260490
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagt 646  Q
    ||||||||  ||||||| |  |||| || |||| |||||||| || ||||||||||||||||||||| ||| ||||||||    
T  1260569 atattcatttagacaaaccggacaaaatcttacgtgctaacaattgtatttatatattagttaaaaaatatggtcaaagt 1260490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 4148183 - 4148108
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||  ||||||||||||||||||    
T  4148183 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgattgttaatatctttaattat 4148108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 536
Target Start/End: Original strand, 14213965 - 14214048
Alignment:
Q  448 ccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||| ||||||||||||| || || |||| ||||||| |||||||||    |||||||||   ||||||||||||||||||||||||    
T  14213965 ccatttatttcaaaatacatttctcactcaaccactaca-acatgacaa----caactttgataattaatatctttaattatatataat 14214048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 24319188 - 24319246
Alignment:
Q  138 cctgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    |||||||| |||||||| ||| ||||| ||||||||| |||||||||||| |||||||||    
T  24319188 cctgatgattaaatttggcaagtgcactaaaccgttt-caagtaataaagaagtaagtaa 24319246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 34484315 - 34484220
Alignment:
Q  142 atgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaagagcatctccactgaggttgtcgttttaactcggaaacta 237  Q
    ||||||||||| | ||| || ||  |||||||||||||||||| |||||||||||| | | |||| || || |||||||||| |||| || |||||    
T  34484315 atgactaaattcggcaagtgtacttaaccgttttcaagtaatagagtagtaagtaaaatcgtctctacggaagttgtcgtttcaactaggcaacta 34484220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 587 - 629
Target Start/End: Complemental strand, 17155268 - 17155226
Alignment:
Q  587 aacaacattttacatgctaacatttttatttatatattagtta 629  Q
    |||||||| |||||||||||||||| ||||||||| |||||||    
T  17155268 aacaacatcttacatgctaacatttgtatttatatgttagtta 17155226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 444 - 529
Target Start/End: Original strand, 17257651 - 17257736
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||| ||||||||||||| |||  |||||| |||| |||  ||| ||||   ||| |||||| ||||||||||||||||||    
T  17257651 tactccattcgtttcaaaatacaagtccaagtcaaccacttcacgtatgccaatgttcaattttgactgttaatatctttaattat 17257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 19087968 - 19088041
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| | || |||| ||| |||| || || |||||| ||||||||||||||||    
T  19087968 gtttcaaaatacatgtccaagtcaaccgcttcacatatgccaatgcataattttgactgttaatatctttaatt 19088041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 580 - 633
Target Start/End: Original strand, 20437149 - 20437202
Alignment:
Q  580 caaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||||||||||| ||||||| | | |||| |||||||| ||||||||||||    
T  20437149 caaatcaaacaacatcttacatgttgatatttgtatttatacattagttaaaaa 20437202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 596 - 665
Target Start/End: Original strand, 31569178 - 31569247
Alignment:
Q  596 ttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    |||||| |||| |||| |||||||| |||| | ||||| |||||||||||||||| |  |||||||||||    
T  31569178 ttacattctaatatttgtatttatacattaataaaaaagtatagtcaaagtaagtcaagtgaataatgca 31569247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 32414689 - 32414762
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    ||||||||||||||||   |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  32414689 gtttcaaaatacatgttcaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 32414762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 6e-46; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 454 - 678
Target Start/End: Original strand, 15332816 - 15333040
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||               ||    
T  15332816 gtttcaaaatacatgtcccagtcaaccactacacacatgccaatacacaactttgaccattaatatttttaattatatataataaaaaaataaaaaaatt 15332915  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    ||||||||| || ||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||| | | ||||||| ||| |||    
T  15332916 tgatatttttaaaatattcatcgagaccaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatttggtcaaagcaagctat 15333015  T
Q  654 atgaataatgcatattatacaattg 678  Q
     |||||| |||| ||| || |||||    
T  15333016 gtgaatagtgcacattgtaaaattg 15333040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 461 - 670
Target Start/End: Complemental strand, 22786873 - 22786666
Alignment:
Q  461 aatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgatatt 560  Q
    ||||||| || |||||||||| | ||| |||| |||| ||||| ||||||| ||||||||||||||||||||||||               |||||||||    
T  22786873 aatacatatcgcagtcaatcattgcacgcatgccaatgcacaattttgaccattaatatctttaattatatataataaatttttttaaaaatttgatatt 22786774  T
Q  561 ttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    || || |||||||||||||||||||||||||||| |||||||| ||||  ||| ||||||||||||||||||| || |||||||||||| ||| ||||||    
T  22786773 ttgaagatattcatcaagacaaatcaaacaacatcttacatgcaaaca--tttgtttatatattagttaaaaaatagagtcaaagtaagctatgtgaata 22786676  T
Q  661 atgcatatta 670  Q
     |||| ||||    
T  22786675 gtgcacatta 22786666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 461 - 670
Target Start/End: Complemental strand, 22782509 - 22782302
Alignment:
Q  461 aatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgatatt 560  Q
    ||||||| || |||||||||| | ||| |||| |||| ||||| ||||||| ||||||||||||||||||||||||               |||||||||    
T  22782509 aatacatatcgcagtcaatcattgcacgcatgccaatgcacaattttgaccattaatatctttaattatatataataaatttttttaaaaatttgatatt 22782410  T
Q  561 ttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    || || |||||||||||||||||||||||||||| |||||||| ||||  ||| ||||||| ||||||||||| || |||||||||||| ||| ||||||    
T  22782409 ttgaagatattcatcaagacaaatcaaacaacatcttacatgcaaaca--tttgtttatattttagttaaaaaatagagtcaaagtaagctatgtgaata 22782312  T
Q  661 atgcatatta 670  Q
     |||| ||||    
T  22782311 gtgcacatta 22782302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 553 - 678
Target Start/End: Original strand, 41252875 - 41252997
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtta 652  Q
    |||||||||| || ||||||||| |||||||||||||| |   ||| |||||||||||| ||||||||||||||||||||| ||| || |||||||| ||    
T  41252875 ttgatattttgaaaatattcatcgagacaaatcaaacatc---ttatatgctaacatttgtatttatatattagttaaaaaatatggttaaagtaagcta 41252971  T
Q  653 tatgaataatgcatattatacaattg 678  Q
    |||||||| |||| ||| || |||||    
T  41252972 tatgaatagtgcacattgtaaaattg 41252997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 456 - 665
Target Start/End: Complemental strand, 44562034 - 44561825
Alignment:
Q  456 ttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttg 555  Q
    ||||||||||||||| ||||||| |||| |||||||| |||| ||||||||||||||||||||||||||||||| || | |               |||     
T  44562034 ttcaaaatacatgtcgcagtcaaccacttcacacatgccaattcacaactttgaccgttaatatctttaattatctaaagtaaagaactataaaaattta 44561935  T
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    | |||||  | ||||| ||| | ||||||| |||||||| |||||||  ||||||| ||||||||| ||||||||||| ||| |||||||||||| || |    
T  44561934 acattttgtaaatatttatcgaaacaaatcgaacaacatcttacatgtcaacatttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgt 44561835  T
Q  656 gaataatgca 665  Q
    ||||| ||||    
T  44561834 gaatagtgca 44561825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 13499447 - 13499541
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  13499447 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 13499541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 20765346 - 20765252
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  20765346 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagt 20765252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 27334843 - 27334937
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  27334843 atattttgaaaatatttttcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 27334937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 33415949 - 33415855
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  33415949 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 33415855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 39866253 - 39866347
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  39866253 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 39866347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 552 - 678
Target Start/End: Original strand, 41751518 - 41751644
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || ||||||||| ||||| ||||||||||||  || |||||||||||| ||||||||||||||||||||| |||  |||||||| |||    
T  41751518 tttgatatttttaaaatattcatcgagacatatcaaacaacatcgtaaatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtatgtt 41751617  T
Q  652 atatgaataatgcatattatacaattg 678  Q
    || | |||| | |||||| || |||||    
T  41751618 atgtaaatattacatattgtaaaattg 41751644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 42490308 - 42490402
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  42490308 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 42490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 567 - 678
Target Start/End: Original strand, 3430400 - 3430508
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcat 666  Q
    ||||| ||| ||||||||||||||   ||||||||||||| ||||||||| |||||||||||||||| ||| ||||||||||||||||| |||| ||||     
T  3430400 atattaatcgagacaaatcaaaca---ttttacatgctaatatttttattaatatattagttaaaaaatatggtcaaagtaagttatataaatagtgcac 3430496  T
Q  667 attatacaattg 678  Q
    ||| || |||||    
T  3430497 attgtaaaattg 3430508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 556 - 668
Target Start/End: Complemental strand, 30213954 - 30213842
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| |||||| ||||| |  |    
T  30213954 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagt 30213855  T
Q  656 gaataatgcatat 668  Q
    ||||| |||||||    
T  30213854 gaatagtgcatat 30213842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 454 - 660
Target Start/End: Complemental strand, 36227797 - 36227591
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    ||||||||||| |||||  ||||||||||| |||||||| |||| ||||| |||||||||||| |||||||||||| || | |               |     
T  36227797 gtttcaaaatatatgtccaagtcaatcacttcacacatgccaatgcacaattttgaccgttaaaatctttaattatttaaagtaaaaaattataaaaata 36227698  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | |||||||||| |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||| || |||| ||| |||||||||||| |     
T  36227697 taatattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattaattgaaaaatatggtcaaagtaagtcaa 36227598  T
Q  654 atgaata 660  Q
    |||||||    
T  36227597 atgaata 36227591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 552 - 678
Target Start/End: Original strand, 3020309 - 3020433
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||||||||| ||||| ||| |||| ||||||||||||| ||| |||| ||||||| |||||||||||| ||||||||  || || ||||||| ||    
T  3020309 tttgatattttaaaaatatttatcgagacgaatcaaacaacatattatatgcgaacatttatatttatatattggttaaaaa--atggttaaagtaaatt 3020406  T
Q  652 atatgaataatgcatattatacaattg 678  Q
    || |||||||| ||||| ||| |||||    
T  3020407 atgtgaataatacatatcataaaattg 3020433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 42761618 - 42761689
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  42761618 acaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 42761689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 21005443 - 21005349
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||| ||||||| ||| ||||||||||||    
T  21005443 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttatatttatatattaattaaaaagtatggtcaaagtaagt 21005349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 27010586 - 27010680
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| | | ||||||||||||    
T  27010586 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagt 27010680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 585 - 678
Target Start/End: Complemental strand, 17643852 - 17643759
Alignment:
Q  585 caaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaattg 678  Q
    ||||||| || |||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||| | |||||||||||| ||| |||||    
T  17643852 caaacaatatcttacatgctaacatttgtatttacatattagttaaaaaatatagtcacagtaaattatgttaataatgcatatgataaaattg 17643759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 552 - 653
Target Start/End: Complemental strand, 41943368 - 41943267
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||||||||| ||||||||  |||||||||||||||||| ||| ||  |||||||| |||||| |||||||||||||| ||| || ||| ||||||    
T  41943368 tttgatattttaaaaatattcattgagacaaatcaaacaacatcttatatattaacatttgtatttaaatattagttaaaaaatattgttaaaataagtt 41943269  T
Q  652 at 653  Q
    ||    
T  41943268 at 41943267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 552 - 658
Target Start/End: Original strand, 23940473 - 23940576
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||||||||| ||||| ||  |||||||||||||| |   ||||||| |||||||||||||||||||||||||||||| ||  ||||| |||| ||    
T  23940473 tttgatattttaaaaatattaattgagacaaatcaaacatc---ttacatgttaacatttttatttatatattagttaaaaaataaggtcaatgtaaatt 23940569  T
Q  652 atatgaa 658  Q
    |||||||    
T  23940570 atatgaa 23940576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 38138078 - 38138002
Alignment:
Q  453 tgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||||  |||||| |||| |||||||| |||| ||||| |||||||||||||||||||||||||    
T  38138078 tgtttcaaaatacatgtccaagtcaaccacttcacacatgccaatgcacaattttgaccgttaatatctttaattat 38138002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 454 - 650
Target Start/End: Complemental strand, 6910586 - 6910390
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| ||||| ||||||||||||| ||||||||||| || | |               ||    
T  6910586 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcacaattttgaccgttaatctctttaattatctaaagtaaaaaattataaaaatt 6910487  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||||| ||| |||| |||||||| |||||||||||| ||| || |||||||||    
T  6910486 taatattttgaaaatatttttcgagacaaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaaaatatggttaaagtaagt 6910390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 444 - 525
Target Start/End: Complemental strand, 21083249 - 21083168
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaa 525  Q
    |||||| | ||||||||||||||||||| |||||| |||  |||||||  |||||||||||||||||| |||||||||||||    
T  21083249 tactccctctgtttcaaaatacatgtcatagtcaaccacgtcacacataccaatacacaactttgaccattaatatctttaa 21083168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 455 - 532
Target Start/End: Original strand, 26406018 - 26406095
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatata 532  Q
    |||||||||||||||| ||||||| |||| |||| |||  ||||||||||||||||| ||||||| ||||||||||||    
T  26406018 tttcaaaatacatgtcgcagtcaaccactgcacatatgctaatacacaactttgaccattaatatatttaattatata 26406095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 455 - 536
Target Start/End: Original strand, 47164460 - 47164541
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||||||||||||| |||||||||| | |||||||  ||||||| || ||||||  ||||||||||||||||||||||||    
T  47164460 tttcaaaatacatgtcgcagtcaatcattgcacacatatcaatacataattttgactattaatatctttaattatatataat 47164541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 556 - 669
Target Start/End: Complemental strand, 54507791 - 54507678
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| |||||  |||| | |||||||||||||| ||||||||||| || | |||||||| |||||||||||| |||| ||||| ||||| |  |    
T  54507791 atattttaaaaatatttgtcaacataaatcaaacaacatcttacatgctaatatctgtatttatacattagttaaaaagtataatcaaaataagtcaagt 54507692  T
Q  656 gaataatgcatatt 669  Q
    ||||| ||||||||    
T  54507691 gaatagtgcatatt 54507678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 556 - 644
Target Start/End: Complemental strand, 21797706 - 21797618
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaa 644  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||    
T  21797706 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaa 21797618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 552 - 663
Target Start/End: Complemental strand, 30057453 - 30057342
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || ||||| | | ||||||||| |||| ||| ||| ||||||||||||   ||||||||||||||||||| ||| || |||||| |||    
T  30057453 tttgatatttttaaaatattgaccgagacaaatcgaacatcatcttatatgctaacatttgcttttatatattagttaaaaaatatggttaaagtatgtt 30057354  T
Q  652 atatgaataatg 663  Q
    || |||||||||    
T  30057353 atgtgaataatg 30057342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 33803672 - 33803577
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagtta-aaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  ||||||||||||||||||||| ||||| ||||| |||| |||||||| |||||||| |||| ||| ||||||||||||    
T  33803672 atattttgaaaatatttgtcaagacaaatcaaacaacatcttacaagctaatatttatatttatacattagttaaaaaagtatggtcaaagtaagt 33803577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 577 - 644
Target Start/End: Complemental strand, 38137953 - 38137886
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaa 644  Q
    |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||    
T  38137953 agacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaa 38137886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 459 - 663
Target Start/End: Original strand, 48334537 - 48334739
Alignment:
Q  459 aaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat--atataatgnnnnnnnnnnnnnntttga 556  Q
    ||||||||||||||||| ||  | |||||||||| |||||||||| ||||||| |||||||||||||||||  |||||||               ||| |    
T  48334537 aaaatacatgtcacagtaaaataatacacacatgtcaatacacaattttgaccattaatatctttaattatgtatataataaaaaatcataaaaatttaa 48334636  T
Q  557 tattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatg 656  Q
    |||| | ||   ||||||| |||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||||  || || |||||||  ||| ||    
T  48334637 tattctgaa---attcatcgagacaaatcaaacaacatcttacatgctaatatttgtatttatata-tagttaaaaaaaatggttaaagtaaactatgtg 48334732  T
Q  657 aataatg 663  Q
    |||||||    
T  48334733 aataatg 48334739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 552 - 678
Target Start/End: Original strand, 15568043 - 15568169
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || ||||| ||| |||||||| |||||| || ||||| | |||||||| ||||||||||||||||||||| |||  ||||| |||  |    
T  15568043 tttgatattttgaaaatattaatcgagacaaataaaacaatatcttacacggtaacatttgtatttatatattagttaaaaaatatgatcaaattaaact 15568142  T
Q  652 atatgaataatgcatattatacaattg 678  Q
    || | ||||||||| ||| || |||||    
T  15568143 atgtaaataatgcacattgtaaaattg 15568169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 455 - 529
Target Start/End: Complemental strand, 28690499 - 28690425
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||  |||||| |||| |||| ||| |||| ||||| |||||||||||||||||||||||||    
T  28690499 tttcaaaatacatgtccaagtcaaccacttcacatatgtcaatgcacaattttgaccgttaatatctttaattat 28690425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 556 - 662
Target Start/End: Complemental strand, 52167359 - 52167253
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || ||||| ||  |||||||||||||||||| ||||||  ||| |||| ||||||||||||| ||||||| ||| ||||||  |||| ||||    
T  52167359 atattttgaatatattaattgagacaaatcaaacaacatcttacatattaatatttgtatttatatattaattaaaaagtatggtcaaaagaagtcatat 52167260  T
Q  656 gaataat 662  Q
    |||||||    
T  52167259 gaataat 52167253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 601 - 665
Target Start/End: Original strand, 27813445 - 27813509
Alignment:
Q  601 tgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| |||| ||| |||||| ||||    
T  27813445 tgctaacatttgtatttatatattagttaaaaaatatagtcaaaataagctatgtgaatagtgca 27813509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 32221085 - 32221010
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||| ||||||||||||| |||||| |||| || | ||| |||| ||||| |||||||||||||||||||||||||    
T  32221085 gttttaaaatacatgtcaaagtcaaccacttcatatatgtcaatgcacaattttgaccgttaatatctttaattat 32221010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 650
Target Start/End: Complemental strand, 44856465 - 44856402
Alignment:
Q  587 aacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||| |||||| ||||||||| ||||||||| ||||||||||| |||||| |||||||||    
T  44856465 aacaacatcttacatactaacatttgtatttatatgttagttaaaaagtatagttaaagtaagt 44856402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 443 - 529
Target Start/End: Complemental strand, 42345661 - 42345575
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||| ||||||||||||||||||||  |||||| || | |||| ||| | ||  |||| |||||||||||||||||||||||||    
T  42345661 atactccttttgtttcaaaatacatgtccaagtcaaccatttcacatatgtcgatgtacaattttgaccgttaatatctttaattat 42345575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 556 - 669
Target Start/End: Original strand, 38492163 - 38492276
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| ||||||||| |||| |||| |||||||||||||||| ||  |||| | ||| || ||||||  |||| ||| ||||||||| |||| ||    
T  38492163 atattttaaaaatattcatcgagacgaatccaacaacattttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaagtatgttaaat 38492262  T
Q  656 gaataatgcatatt 669  Q
     ||||||| |||||    
T  38492263 caataatgtatatt 38492276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 556 - 633
Target Start/End: Original strand, 43181467 - 43181544
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||||| |||||  || |||||||| ||||||||| |||||| |||| |||| |||||||| ||||||||||||    
T  43181467 atattttaaaaatatttgtcgagacaaattaaacaacatcttacatactaatatttatatttatacattagttaaaaa 43181544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 533
Target Start/End: Original strand, 9492925 - 9492997
Alignment:
Q  461 aatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatat 533  Q
    ||||||| || ||||||| |||  || ||||| |||||||||||||||| | |||||||||||||||||||||    
T  9492925 aatacatatcgcagtcaaacacctcatacatgtcaatacacaactttgatcattaatatctttaattatatat 9492997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 652
Target Start/End: Complemental strand, 33462858 - 33462758
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || ||||||||| |||| |||| |||||||||||| ||| ||  |||| | ||| |||||||||  |||| |||||| ||||||||||    
T  33462858 tttgatattttgaaaatattcatcgagacgaatctaacaacattttatatgatattatttatctttgtatattagtagaaaagtatagttaaagtaagtt 33462759  T
Q  652 a 652  Q
    |    
T  33462758 a 33462758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 25527653 - 25527578
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||| ||||||||||| |||| || |||| ||||||||  ||| ||||||||||| ||||||||| |||||||||    
T  25527653 gtttccaaatacatgtcgcagttaaccacttcacacatgttaatgcacaactttgatcgttaatatttttaattat 25527578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 552 - 611
Target Start/End: Complemental strand, 28562287 - 28562228
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacattt 611  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| ||||||| || |||||    
T  28562287 tttgatattttaaaaatattcatcgagacaaatccaacaacatcttacatgttatcattt 28562228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 553 - 669
Target Start/End: Original strand, 19327442 - 19327555
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtta 652  Q
    |||||||||| || ||||||||  | ||||||   ||||||| ||| || ||||||||| ||| ||| ||||||||||||| ||| ||  ||||||||||    
T  19327442 ttgatattttgaaaatattcattgaaacaaat---acaacatcttagatcctaacatttgtatctatctattagttaaaaaatatggtttaagtaagtta 19327538  T
Q  653 tatgaataatgcatatt 669  Q
    | |||||| ||||||||    
T  19327539 tgtgaatagtgcatatt 19327555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 634
Target Start/End: Original strand, 28389185 - 28389263
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaat 634  Q
    |||||||||| |||||||||||||  |||  |||||||| ||| |||||||||||| | ||| ||||||||| ||||||    
T  28389185 atattttaaaaatattcatcaagatgaattcaacaacatcttatatgctaacatttgtctttgtatattagtaaaaaat 28389263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 33128031 - 33128125
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| ||||| ||| | |||||||| |||| || ||||||| ||| |||| ||||||| ||||||||||||| |||  ||||| |||||    
T  33128031 atattttaaaaatatttatcgaaacaaatcagacaatatcttacatgttaatatttatatttatgtattagttaaaaagtatgatcaaaataagt 33128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 454 - 532
Target Start/End: Original strand, 42761493 - 42761571
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatata 532  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| |||||||||||||||| ||||    
T  42761493 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaattttata 42761571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 43467854 - 43467948
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| |||| |||||| |||   ||||||| || ||||||||| ||| ||||||||||||    
T  43467854 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacctgctaatattagaatttatacatcagttaaaaagtatggtcaaagtaagt 43467948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 20765448 - 20765375
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  20765448 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 20765375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 27010484 - 27010557
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  27010484 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 27010557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 529
Target Start/End: Original strand, 43467742 - 43467827
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||  |||||||||||||||||  |||||| || |  | | ||| |||| ||||| |||||||||||||||||||||||||    
T  43467742 tactccatccgtttcaaaatacatgtctaagtcaaccattttatatatgtcaatgcacaattttgaccgttaatatctttaattat 43467827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 13499346 - 13499418
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    ||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  13499346 tttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 13499418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 443 - 527
Target Start/End: Complemental strand, 21005556 - 21005472
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||  |||||||||||||||||  |||||| || | |||| ||| |||| || || |||||| ||||||||||||||||    
T  21005556 atactccatccgtttcaaaatacatgtccaagtcaaccatttcacatatgccaatgcataattttgactgttaatatctttaatt 21005472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 454 - 526
Target Start/End: Original strand, 23940378 - 23940450
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaat 526  Q
    ||||||||||| || || ||||||| ||||||||||||   |||| |||||||||||| ||||||| ||||||    
T  23940378 gtttcaaaatatatatcgcagtcaaccactacacacatactaatatacaactttgaccattaatatttttaat 23940450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 459 - 535
Target Start/End: Complemental strand, 30174969 - 30174893
Alignment:
Q  459 aaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataa 535  Q
    ||||||||||||| | ||||  ||| |||||| | ||| |||||||||||||| ||||||| ||||||||| |||||    
T  30174969 aaaatacatgtcaaaatcaactacttcacacaggtcaagacacaactttgaccattaatatatttaattatctataa 30174893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 41252764 - 41252832
Alignment:
Q  441 acatactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttga 509  Q
    |||||| ||||| ||| ||||||||||||| ||||||| || | |||||||| ||||||| ||||||||    
T  41252764 acatacaccattcgttccaaaatacatgtcgcagtcaaccagtgcacacatgccaatacaaaactttga 41252832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 457 - 529
Target Start/End: Original strand, 43181369 - 43181441
Alignment:
Q  457 tcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||  | |||| |||| | |||||| |||| || || |||||||||||||||||||||||||    
T  43181369 tcaaaatacatgtccaaatcaaccacttctcacatgtcaatgcataattttgaccgttaatatctttaattat 43181441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 616
Target Start/End: Original strand, 46418054 - 46418118
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatt 616  Q
    |||||||||||||| ||||||||  ||| ||||||||||| |  |||||||||||||||| ||||    
T  46418054 tttgatattttaaaaatattcattgagaaaaatcaaacaaaaacttacatgctaacatttgtatt 46418118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 21797808 - 21797733
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||||  |||||| |||| |||| |||  ||| || || ||||||| |||||||||||||||||    
T  21797808 gtttcaaaatacatgtctaagtcaaccacttcacatatgttaatgcataattttgaccattaatatctttaattat 21797733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 33416051 - 33415976
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||| |||||  |||||| |||| |||| ||| |||| ||||| |||||| |||||||| |||||||||    
T  33416051 gtttcaaaatagatgtccaagtcaaccacttcacatatgtcaatgcacaattttgactgttaatatatttaattat 33415976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 556 - 646
Target Start/End: Complemental strand, 5505031 - 5504941
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagt 646  Q
    ||||||| || ||||||||| |||| |||| ||||| |||||| ||| ||  |||| | ||| ||||||||| ||||| ||||||||||||    
T  5505031 atattttgaatatattcatcgagacgaatccaacaatattttatatgatattatttatttttgtatattagtaaaaaaatatagtcaaagt 5504941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 590 - 660
Target Start/End: Complemental strand, 25527520 - 25527450
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    ||||| ||||||| ||| |||| ||||||||||| ||||||||| ||| ||| |||||||| || ||||||    
T  25527520 aacatcttacatgttaatatttgtatttatatatcagttaaaaaatatggtcgaagtaagtcatgtgaata 25527450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 32220983 - 32220933
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaa 606  Q
    |||||||||| |||||  || |||||||||||||||||| |||||||||||    
T  32220983 atattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgctaa 32220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 588 - 650
Target Start/End: Original strand, 34912286 - 34912348
Alignment:
Q  588 acaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| |||||  |||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  34912286 acaacatcttacaatctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 34912348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 600 - 653
Target Start/End: Complemental strand, 3017897 - 3017844
Alignment:
Q  600 atgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    |||||||||||| |||||||||| |||||||||| ||| ||||||  |||||||    
T  3017897 atgctaacatttgtatttatataatagttaaaaaatatggtcaaaacaagttat 3017844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 3020204 - 3020293
Alignment:
Q  446 ctccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataa 535  Q
    |||||||||||   |||||||||||  |||||| |||| || | ||| |||||||||||||||||  |||||||| || ||||| |||||    
T  3020204 ctccatttgttgttaaatacatgtcgtagtcaaccacttcatatatgtcaatacacaactttgactattaatatcattgattatctataa 3020293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 10950041 - 10950098
Alignment:
Q  141 gatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaag 198  Q
    ||||| || ||||| ||| ||||||||| ||||||||| ||||||||||| |||||||    
T  10950041 gatgattatatttggcaagtgcaccaaaacgttttcaactaataaagtagcaagtaag 10950098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 610
Target Start/End: Complemental strand, 11372920 - 11372887
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatt 610  Q
    |||||||||||||||||| |||||||||||||||    
T  11372920 agacaaatcaaacaacatcttacatgctaacatt 11372887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 460 - 525
Target Start/End: Original strand, 20395563 - 20395628
Alignment:
Q  460 aaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaa 525  Q
    |||||||||||  |||||| |||  |||||||| ||||| ||||||||| | ||||||||||||||    
T  20395563 aaatacatgtcgtagtcaaccacatcacacatgccaatatacaactttgtctgttaatatctttaa 20395628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 27334741 - 27334814
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    ||||||||||||||||   |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  27334741 gtttcaaaatacatgttcaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 27334814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 552 - 649
Target Start/End: Original strand, 28958905 - 28959002
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaag 649  Q
    ||||||||||| || ||| |||||||||| |||| ||| |||| ||| ||| ||  |||| | |||||||||||||  |||| ||| |||||||||||    
T  28958905 tttgatattttgaaaatactcatcaagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtaag 28959002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 39866151 - 39866224
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    ||||||||||||||||   |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  39866151 gtttcaaaatacatgttcaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 39866224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 463 - 536
Target Start/End: Original strand, 41750854 - 41750927
Alignment:
Q  463 tacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    ||||||||  ||||||||| | |||||||| || ||||||| ||| | | ||||||||||||||||||| ||||    
T  41750854 tacatgtcgtagtcaatcattgcacacatgtcagtacacaattttaatcattaatatctttaattatatgtaat 41750927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 42490206 - 42490279
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| | ||||||||||||||    
T  42490206 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgacagataatatctttaatt 42490279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 612 - 669
Target Start/End: Complemental strand, 43382807 - 43382751
Alignment:
Q  612 ttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatt 669  Q
    |||| |||||||||||  |||| | ||||||||||| |||||||||||||||||||||    
T  43382807 ttatatatatattagtagaaaaat-tagtcaaagtaggttatatgaataatgcatatt 43382751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 485 - 526
Target Start/End: Complemental strand, 44802091 - 44802050
Alignment:
Q  485 cacacatgacaatacacaactttgaccgttaatatctttaat 526  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||    
T  44802091 cacacgtgacaatacacaattttgaccattaatatctttaat 44802050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 459 - 516
Target Start/End: Original strand, 48333592 - 48333649
Alignment:
Q  459 aaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaa 516  Q
    ||||||||||||||||| ||  | |||||||||| |||||||||| ||||||| ||||    
T  48333592 aaaatacatgtcacagtaaaataatacacacatgtcaatacacaattttgaccattaa 48333649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 3e-38; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 454 - 665
Target Start/End: Original strand, 22838937 - 22839148
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    ||||||||||||||||| ||||||| |||   ||||||| ||||| |||||||||||| || ||||||||||||||| |||||               ||    
T  22838937 gtttcaaaatacatgtcgcagtcaaacacggtacacatgtcaataaacaactttgaccattgatatctttaattatagataataaaaaattataaaaatt 22839036  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    ||||||||| || ||||||||| |||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  22839037 tgatattttgaaaatattcatcgagacaaatcaaacaacatcttatatgctaacattttaatttatatactagttaaaaaatatggtcaaagtaagttat 22839136  T
Q  654 atgaataatgca 665  Q
     |||||| ||||    
T  22839137 gtgaatagtgca 22839148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 579 - 678
Target Start/End: Complemental strand, 11931818 - 11931719
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaattg 678  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| || |||||    
T  11931818 acaaatcaaacaacatcttaaatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattgtaaaattg 11931719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 552 - 666
Target Start/End: Complemental strand, 38292106 - 38291992
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || ||||||||  |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||| ||| |||||||||||||    
T  38292106 tttgatattttgaaaatattcattgagacaaatcaaacaacatcttacatgttaacatttgtatttatatactagttaaaaaatatggtcaaagtaagtt 38292007  T
Q  652 atatgaataatgcat 666  Q
    || ||||||||||||    
T  38292006 atctgaataatgcat 38291992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 567 - 678
Target Start/End: Complemental strand, 24252098 - 24251988
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcat 666  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||| |||||||| |||||||| |||    
T  24252098 atattcattgagacaaatcaaacaacattt-acatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaataatacat 24252000  T
Q  667 attatacaattg 678  Q
    ||| || |||||    
T  24251999 attgtaaaattg 24251988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 454 - 669
Target Start/End: Complemental strand, 44365409 - 44365194
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  ||||||||||| |||| ||| |||| || || ||||||||||||||||||||||||| || | |               ||    
T  44365409 gtttcaaaatacatgtccaagtcaatcacttcacatatgccaatgcataattttgaccgttaatatctttaattatctaaagtaaaaaattatgaaaatt 44365310  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| |     
T  44365309 taatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaa 44365210  T
Q  654 atgaataatgcatatt 669  Q
     |||||| ||||||||    
T  44365209 gtgaatagtgcatatt 44365194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 455 - 665
Target Start/End: Complemental strand, 7800098 - 7799888
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnnttt 554  Q
    ||||||||||||||||   ||||| |||| |||||||| | || ||||||||||||||||||||||||||||||| || | |               |||    
T  7800098 tttcaaaatacatgtcgttgtcaaccacttcacacatgcctatgcacaactttgaccgttaatatctttaattatctaaagtaaaaaattataaaaattt 7799999  T
Q  555 gatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttata 654  Q
     ||||||| || |||||   | |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||  |||||||||||| ||     
T  7799998 aatattttgaaaatatttgccgagacaaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaagtagggtcaaagtaagtcatg 7799899  T
Q  655 tgaataatgca 665  Q
    |||||| ||||    
T  7799898 tgaatagtgca 7799888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 455 - 633
Target Start/End: Original strand, 20387261 - 20387429
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnnttt 554  Q
    |||||||||||||||| |||||||||| | |||||||| |||||||||||||||||| ||||||| ||| ||||||||||||                ||    
T  20387261 tttcaaaatacatgtcgcagtcaatcagtgcacacatgccaatacacaactttgaccattaatatatttgattatatataat----------aaaaaatt 20387350  T
Q  555 gatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||| || ||||||||| | |||||||||||||||| |||||||||||||||| ||  || ||||||||||||||    
T  20387351 gatattttgaaaatattcatcgaaacaaatcaaacaacatcttacatgctaacatttatacataaatattagttaaaaa 20387429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 455 - 650
Target Start/End: Original strand, 9172157 - 9172352
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnnttt 554  Q
    ||||||||||||||||  |||||| |||| |||||||| ||||  |||| ||||||||||||||||||||||||| || | |               |||    
T  9172157 tttcaaaatacatgtccaagtcaaccacttcacacatgccaatgtacaattttgaccgttaatatctttaattatctaaagtaaaaaattataaaagttt 9172256  T
Q  555 gatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
     ||||||| || ||||| ||| || ||||||||||||||| |||||||||||| ||| |||||||| |||||||||||| ||| ||||||||||||    
T  9172257 aatattttgaaaatatttatcgaggcaaatcaaacaacatcttacatgctaacttttgtatttatacattagttaaaaaatatggtcaaagtaagt 9172352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 454 - 665
Target Start/End: Original strand, 11841603 - 11841814
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  ||||||||||| |||| |||  ||| || || ||||||||||||||||||||||||| || | |               ||    
T  11841603 gtttcaaaatacatgtccaagtcaatcacttcacatatgctaatgcataattttgaccgttaatatctttaattatctaaagtaaaaaattataaaaatt 11841702  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | ||||||||||  ||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| |     
T  11841703 taatattttaaaagtatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaa 11841802  T
Q  654 atgaataatgca 665  Q
    ||||||| ||||    
T  11841803 atgaatagtgca 11841814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 458 - 665
Target Start/End: Original strand, 31610677 - 31610874
Alignment:
Q  458 caaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgat 557  Q
    ||||||||||||  || |||| || |||||||||| |||||||||||||||||  ||||||||||||||||||||||||               ||||||    
T  31610677 caaaatacatgtggcattcaaccattacacacatgtcaatacacaactttgactattaatatctttaattatatataat---------aaaaaatttgat 31610767  T
Q  558 attttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatga 657  Q
    ||||| ||  |||||||  |||||||||||||||| | |||||| ||||||||| |||||||||||||||||||||  || || ||| |||||||| |||    
T  31610768 attttcaa-gtattcattgagacaaatcaaacaacgtcttacattctaacatttgtatttatatattagttaaaaaaaatggtaaaaataagttatgtga 31610866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 5405146 - 5405052
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  5405146 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 5405052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 7608199 - 7608105
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  7608199 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 7608105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 8042134 - 8042228
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  8042134 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 8042228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 19141178 - 19141272
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  19141178 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 19141272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 455 - 536
Target Start/End: Complemental strand, 42133992 - 42133911
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||||||| ||||| |||||||||||| ||||||||  ||||||||||||||||||| ||||| ||||||||||||||||    
T  42133992 tttcaaaatatatgtcgcagtcaatcactgcacacatgctaatacacaactttgaccgtaaatatatttaattatatataat 42133911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 443 - 527
Target Start/End: Complemental strand, 11931928 - 11931844
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    ||||| ||| |||||||||||||||||| ||||||| |||| || ||||| |||||||||||||||||| |||||||||||||||    
T  11931928 atacttcatctgtttcaaaatacatgtcgcagtcaaccactgcaaacatgccaatacacaactttgaccattaatatctttaatt 11931844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 552 - 678
Target Start/End: Original strand, 44563106 - 44563232
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaat-tatagtcaaagtaagt 650  Q
    ||||||||||| || ||||| ||  ||| |||||||||| |||| ||||||||||||| | ||||||||||||| |||||||  |||  |||||||||||    
T  44563106 tttgatattttgaaaatatttattgagaaaaatcaaaca-cattctacatgctaacatatgtatttatatattaattaaaaaaatatgatcaaagtaagt 44563204  T
Q  651 tatatgaataatgcatattatacaattg 678  Q
    |||||||||| ||||||||||| |||||    
T  44563205 tatatgaatagtgcatattataaaattg 44563232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 6223216 - 6223122
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  6223216 atattttgaaaatatttgtcgagacaaatcaaacatcatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagt 6223122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 32774741 - 32774647
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| |||||  ||||||||||||||||||||| ||||||  ||| |||| ||| ||||||||||||||||| ||| ||||||||||||    
T  32774741 atattttaaaaatatttgtcaagacaaatcaaacaacatcttacatattaatatttatatgtatatattagttaaaaagtatggtcaaagtaagt 32774647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 580 - 669
Target Start/End: Complemental strand, 16865180 - 16865091
Alignment:
Q  580 caaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatt 669  Q
    |||||| |||||||  |||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||| ||||||||| || |||||    
T  16865180 caaatcgaacaacaacttacatgctaacatttgtatttatatgttagttaaaaagtatcgtcaaagtaagtcatatgaatattgtatatt 16865091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 444 - 650
Target Start/End: Original strand, 13125145 - 13125351
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnn 543  Q
    ||||||||  |||||||||||||||||  ||||||||||| |||| ||| ||||  |||| ||||| |||||||||||||||||||  | | |           
T  13125145 tactccatccgtttcaaaatacatgtccaagtcaatcacttcacatatgccaatgtacaattttgatcgttaatatctttaattattcaaagtaaaaaat 13125244  T
Q  544 nnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaa 643  Q
            ||| |||||||||| ||||| ||| ||||||||||||||| || ||| ||||||| |||| |||||||| |||||||||||| ||| || ||    
T  13125245 tataaaaatttaatattttaaaaatatttatcgagacaaatcaaacaatatcttagatgctaatatttgtatttatacattagttaaaaaatatggtgaa 13125344  T
Q  644 agtaagt 650  Q
    |||||||    
T  13125345 agtaagt 13125351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 577 - 669
Target Start/End: Complemental strand, 36072303 - 36072211
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatt 669  Q
    |||||||||||| ||||| ||||||||||| |||| |||||||| |||||||||||| |||  ||||||||||| | ||||||| ||||||||    
T  36072303 agacaaatcaaataacatcttacatgctaatatttatatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatatt 36072211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 552 - 643
Target Start/End: Complemental strand, 38839227 - 38839136
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaa 643  Q
    ||||||| ||| || ||||||||| ||| |||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| ||| |||||    
T  38839227 tttgatagtttgaaaatattcatcgagagaaatcatacaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaa 38839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 596 - 678
Target Start/End: Original strand, 43444692 - 43444774
Alignment:
Q  596 ttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaattg 678  Q
    |||||||||||||||| ||||||||||||||||||||| ||| ||||||| || |||| ||||||||||| ||| || |||||    
T  43444692 ttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagaaaattatgtgaataatgcacattgtaaaattg 43444774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 444 - 529
Target Start/End: Original strand, 36177580 - 36177665
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||  ||||||||||||||||||||||||| |||| |||||||  |||| ||||||||||||  |||||||||| ||||||    
T  36177580 tactccatccgtttcaaaatacatgtcacagtcaaccacttcacacatatcaatgcacaactttgacttttaatatcttcaattat 36177665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 577 - 650
Target Start/End: Complemental strand, 39358275 - 39358202
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||||| ||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  39358275 agacaaatcaaagaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 39358202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 556 - 649
Target Start/End: Complemental strand, 44645020 - 44644927
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaag 649  Q
    ||||||| || |||||  ||||||||||| ||||||||| ||| ||| ||| |||| ||||||||||||||||||||| ||| |||||||||||    
T  44645020 atattttgaaaatatttgtcaagacaaattaaacaacatcttatatgttaatatttatatttatatattagttaaaaagtatggtcaaagtaag 44644927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 599 - 678
Target Start/End: Original strand, 9006939 - 9007018
Alignment:
Q  599 catgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaattg 678  Q
    ||||||||||||| |||||||| |||||||||||| ||| ||||||||||| || |||||||||||| ||| || |||||    
T  9006939 catgctaacatttgtatttataaattagttaaaaaatatggtcaaagtaagctacatgaataatgcacattgtaaaattg 9007018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 576 - 655
Target Start/End: Original strand, 13117456 - 13117535
Alignment:
Q  576 aagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| |||||||| ||| || |||| |||| ||||||||||| ||||||||| ||| |||||||||||||||||    
T  13117456 aagacaaatcgaacaacatcttagatactaatatttatatttatatatcagttaaaaaatatggtcaaagtaagttatat 13117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 442 - 529
Target Start/End: Original strand, 19165780 - 19165867
Alignment:
Q  442 catactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||| | ||||||||||||||  || || ||||||||| |||| ||| | || |||||||||||||||||||||||||||||||    
T  19165780 catactccttgtgtttcaaaatacacatcgcactcaatcacttcacatatgtcgatgcacaactttgaccgttaatatctttaattat 19165867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 455 - 529
Target Start/End: Complemental strand, 36072425 - 36072351
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||  ||||||||||| |||| |||||||| ||||| |||||| ||||||||||||| ||||    
T  36072425 tttcaaaatacatgtccaagtcaatcacttcacatatgacaatgcacaattttgactgttaatatctttagttat 36072351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 596 - 665
Target Start/End: Complemental strand, 19262790 - 19262721
Alignment:
Q  596 ttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||||| || |||| ||||    
T  19262790 ttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttaaataaatagtgca 19262721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 567 - 655
Target Start/End: Original strand, 9553844 - 9553931
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||| ||| ||||||||| |||||||||||||||| ||| ||||  |||||||||||||||||||| |   |||||||||||||||||    
T  9553844 atatttatcgagacaaatcgaacaacattttacatgttaatatttg-atttatatattagttaaaaaatgcggtcaaagtaagttatat 9553931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 454 - 660
Target Start/End: Original strand, 31903890 - 31904096
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatct---ttaattatatataatgnnnnnnnnnnnnn 550  Q
    ||||||||||||||||| ||||||| |||   ||| |||| ||||||||||||||||| |||||||||   |||||||||||||||                  
T  31903890 gtttcaaaatacatgtcgcagtcaaccaccgtacatatgataatacacaactttgaccattaatatctaatttaattatatataataaaaaattataaaa 31903989  T
Q  551 ntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
     ||||||||||| || ||||||||  | |||||||| ||| |   |||| || ||| |||| ||||||||||||||||||||| ||| |||| ||||||     
T  31903990 atttgatattttgaaaatattcatagatacaaatcacacatc---ttacgtgataatatttatatttatatattagttaaaaaatatggtcagagtaagc 31904086  T
Q  651 tatatgaata 660  Q
    ||| ||||||    
T  31904087 tatgtgaata 31904096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 454 - 529
Target Start/End: Original strand, 33228455 - 33228530
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||| ||||  ||||||| |||| |||||||| |||| ||||||||||| ||||||||| |||||||||    
T  33228455 gtttcaaaatatatgttgcagtcaaccacttcacacatgtcaatgcacaactttgatcgttaatatatttaattat 33228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 443 - 525
Target Start/End: Original strand, 24093072 - 24093154
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaa 525  Q
    |||||||||  |||||||||||||||||  |||||| |||| |||||||| |||| ||||||||||   ||||||||||||||    
T  24093072 atactccatccgtttcaaaatacatgtcgtagtcaaccacttcacacatgtcaattcacaactttgtatgttaatatctttaa 24093154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 599 - 665
Target Start/End: Complemental strand, 42133859 - 42133793
Alignment:
Q  599 catgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||||||| ||||||||||||||||||||| |||  |||||||||  |||||||||| ||||    
T  42133859 catgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaaactatatgaatagtgca 42133793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 596 - 677
Target Start/End: Complemental strand, 7666200 - 7666119
Alignment:
Q  596 ttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaatt 677  Q
    |||||| | |||| || |||||||||||||| |||||  ||| |||||||||| |||||||||||||||| |||||| ||||    
T  7666200 ttacataccaacaattgtatttatatattagataaaatatatggtcaaagtaaattatatgaataatgcacattataaaatt 7666119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 495 - 536
Target Start/End: Complemental strand, 38840644 - 38840603
Alignment:
Q  495 aatacacaactttgaccgttaatatctttaattatatataat 536  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  38840644 aatacacaactttgaccattaatatctttaattatatataat 38840603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 669
Target Start/End: Original strand, 24259484 - 24259581
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagtt-aaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||  |||||||||||||||||| ||||||||||||      |||| |||||||||| ||||| | | |||||||||||| || |||||||||||    
T  24259484 atattcattgagacaaatcaaacaacatcttacatgctaac------atttgtatattagttaaaaaaatgtggtcaaagtaagtaatgtgaataatgca 24259577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 622
Target Start/End: Complemental strand, 34248626 - 34248559
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatata 622  Q
    ||||||||||| || ||||||||| ||||||||||   ||||| |||||||||||||||| ||||||||||    
T  34248626 tttgatattttgaaaatattcatcgagacaaatca---aacatcttacatgctaacatttgtatttatata 34248559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 443 - 529
Target Start/End: Complemental strand, 33607635 - 33607549
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||  |||||||||||||||||  ||| ||  ||| |||| ||| |||| ||||| ||||| |||||||||||||||||||    
T  33607635 atactccatccgtttcaaaatacatgtccaagttaactacttcacatatgtcaatgcacaattttgatcgttaatatctttaattat 33607549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 41669849 - 41669799
Alignment:
Q  295 aacgttcggaaaagtatgaccagaagtatcttatgaagcctcatgtttcta 345  Q
    |||||||| ||||||||||||| ||||||||| ||||||||| ||||||||    
T  41669849 aacgttcgaaaaagtatgaccaaaagtatcttctgaagcctcttgtttcta 41669799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 552 - 662
Target Start/End: Original strand, 45001794 - 45001904
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||||||||| ||||||||  |||| ||||  ||||||||||| ||||||   ||| | ||||||||||||   |||| || ||||||| || |||    
T  45001794 tttgatattttaaaaatattcatggagacgaatccgacaacattttatatgctatattttgtctttatatattagcagaaaaatagagtcaaaatatgtt 45001893  T
Q  652 atatgaataat 662  Q
    |||||||||||    
T  45001894 atatgaataat 45001904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 5405248 - 5405175
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  5405248 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 5405175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 7608301 - 7608228
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  7608301 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 7608228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 19141076 - 19141149
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  19141076 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 19141149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 633
Target Start/End: Complemental strand, 24607903 - 24607841
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||||  |||||||||||||||||| ||||    |||||||| |||||||||||||||||||||    
T  24607903 atattcattgagacaaatcaaacaacatcttac----taacatttatatttatatattagttaaaaa 24607841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 590 - 650
Target Start/End: Original strand, 2183103 - 2183163
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||| ||||||||||| |||| |||| ||| |||||||||||| ||| ||||||||||||    
T  2183103 aacatcttacatgctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagt 2183163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 7706466 - 7706546
Alignment:
Q  143 tgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaagagcatctccactgaggttgtcgttt 223  Q
    |||||||||||| ||| |||||||||| |||| |||||||||||||| || |||| | | ||||||| | | |||||||||    
T  7706466 tgactaaatttgacaagtgcaccaaactgtttccaagtaataaagtattatgtaaaatcgtctccacagggattgtcgttt 7706546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 644
Target Start/End: Complemental strand, 24283109 - 24283021
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaa 644  Q
    |||||||||| |||||||||||||| |||| |||||||| ||||||| ||  |||| | ||| |  |||||| ||||| ||||||||||    
T  24283109 atattttaaaaatattcatcaagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtaaaaaaatatagtcaaa 24283021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 441 - 529
Target Start/End: Complemental strand, 32774857 - 32774769
Alignment:
Q  441 acatactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||| | || |||||||||||||||||  |||||| || |  ||| ||  |||| | |||||||||||||||||||||||||||||    
T  32774857 acatactaccttcgtttcaaaatacatgtccaagtcaaccattttacatatatcaatgcgcaactttgaccgttaatatctttaattat 32774769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 665
Target Start/End: Complemental strand, 33607522 - 33607417
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||| ||||||||| ||||||    | |||| |||||||| |||||||||||| |||| ||||||||||| | ||    
T  33607522 atattttgaaaatatttgtcgagacaaataaaacaacatcttacat----atatttgtatttatacattagttaaaaagtataatcaaagtaagtcaaat 33607427  T
Q  656 gaataatgca 665  Q
    ||||| ||||    
T  33607426 gaatagtgca 33607417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 633
Target Start/End: Original strand, 36177688 - 36177766
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||| |||||||||| ||||| ||  |||||||||||||| |   ||| ||| ||| ||||||||||||||||||||||||||    
T  36177688 tttaatattttaaaaatatttatttagacaaatcaaacatc---ttagatgttaatatttttatttatatattagttaaaaa 36177766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 529
Target Start/End: Original strand, 36719354 - 36719409
Alignment:
Q  474 gtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||| |||| |||| ||| |||| ||||| |||||||||||||||||||||||||    
T  36719354 gtcaaccacttcacatatgtcaatgcacaattttgaccgttaatatctttaattat 36719409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 652
Target Start/End: Complemental strand, 2831858 - 2831760
Alignment:
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtta 652  Q
    ||||||||| || ||| |||||  |||||||| ||| |||| ||||||| ||  |||| ||||| |||||||||  |||| ||| ||||||||||||||    
T  2831858 tgatattttgaaaatactcatctggacaaatctaacgacatcttacatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaagtta 2831760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 4045382 - 4045336
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatg 602  Q
    |||||||||| ||||||||| |||| |||| ||||||||||||||||    
T  4045382 atattttaaaaatattcatcgagacgaatccaacaacattttacatg 4045336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 579 - 633
Target Start/End: Original strand, 19165918 - 19165972
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||| ||||||||| ||||||| ||||| || ||||||||||||| |||||||    
T  19165918 acaaattaaacaacatcttacatgataacaattgtatttatatattaattaaaaa 19165972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 579 - 633
Target Start/End: Original strand, 24093671 - 24093724
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||| |||||||| |||||||||||||||| || |||||| |||||||||||    
T  24093671 acaaatcgaacaacatcttacatgctaacatttgta-ttatatgttagttaaaaa 24093724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 536
Target Start/End: Complemental strand, 32887134 - 32887076
Alignment:
Q  478 atcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||| |||| ||| ||||||||||| ||||  |||||||||||||||||| ||||||    
T  32887134 atcacttcacatatgtcaatacacaacgttgattgttaatatctttaattatctataat 32887076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 552 - 634
Target Start/End: Original strand, 38934940 - 38935022
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaat 634  Q
    |||||||||||||| ||||| ||| | ||||||| |||||||||||| ||||||  |||| | ||| ||||| ||| ||||||    
T  38934940 tttgatattttaaaaatatttatcgatacaaatccaacaacattttatatgctataatttatgtttttatatcagtaaaaaat 38935022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 16754642 - 16754699
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgacc 511  Q
    |||| ||||||||| || ||| ||| ||||||| ||||| ||||||||||||||||||    
T  16754642 gttttaaaatacatatcgcaggcaaccactacatacatgccaatacacaactttgacc 16754699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 633
Target Start/End: Complemental strand, 36931761 - 36931684
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||||| ||||||||| |||| |||| |||||||| ||| ||| ||  |||| | ||||||||||||| |||||    
T  36931761 atattttaaaaatattcatcgagacgaatccaacaacatcttatatgatattatttatctttatatattagtaaaaaa 36931684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 1e-37; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 458 - 660
Target Start/End: Original strand, 33700087 - 33700289
Alignment:
Q  458 caaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgat 557  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||               ||||||    
T  33700087 caaaatacatgtcgcagtcaaccactgcacacatgccaatacacaactttgaccattaatatctttaattatatataataaaaaattataaaaatttgat 33700186  T
Q  558 attttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatga 657  Q
    ||||| || || ||||   |||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||| ||| ||||||||||| ||| |||    
T  33700187 attttgaaaatgttcactgagacaaatcaaacaacatcttacttactaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtga 33700286  T
Q  658 ata 660  Q
    |||    
T  33700287 ata 33700289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 443 - 644
Target Start/End: Complemental strand, 18021132 - 18020928
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnn 542  Q
    |||||||||  ||||| ||||||||||  ||||||| |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||          
T  18021132 atactccatccgtttctaaatacatgttgcagtcaaccactgcacacatggcaatacacaactttgaccattaatatctttaattatatataataaaaaa 18021033  T
Q  543 nnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaaca---tttttatttatatattagttaaaaattatag 639  Q
             ||||||||||| || ||||||||| ||||||||||||||| || |||||||||||||   ||| ||||| ||||||||||||||| ||| |    
T  18021032 atataaaaatttgatattttgaaaatattcatcgagacaaatcaaacaatatcttacatgctaacacattttgtatttgtatattagttaaaaaatatgg 18020933  T
Q  640 tcaaa 644  Q
    |||||    
T  18020932 tcaaa 18020928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 443 - 643
Target Start/End: Complemental strand, 18035361 - 18035163
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnn 542  Q
    |||||||||  |||| ||||||||||||  |||||| |||| | || ||| ||| | |||||||||||| ||||||||||||||||||||||||          
T  18035361 atactccatccgttttaaaatacatgtcgtagtcaaccactgcgcatatgccaacatacaactttgaccattaatatctttaattatatataataaaaaa 18035262  T
Q  543 nnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtca 642  Q
              |||||||||| || ||||| ||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| ||||    
T  18035261 taaaaaaa--ttgatattttgaaaatattaatcgagacaaatcaaacaacatcttacatgctaacatttgcatttatatattagttaaaaattatggtca 18035164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 454 - 650
Target Start/End: Complemental strand, 14237532 - 14237336
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| ||||| ||||||||||||||||||||||||| || | |               ||    
T  14237532 gtttcaaaatacatgtccaagtcaaccacttcacatatgtcaatgcacaattttgaccgttaatatctttaattatctaaagtaaaaaattataaaaatt 14237433  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  14237432 taatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagt 14237336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 454 - 665
Target Start/End: Original strand, 40204732 - 40204943
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||| || ||||||||||||| |||| ||||| || |||||||||| ||||||| ||||| | | ||||||| ||||||               ||    
T  40204732 gtttcaaagtatatgtcacagtcaaccactgcacacgtgccaatacacaattttgaccattaatgtttgtaattatctataataaaaaattataaaaatt 40204831  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    ||||||||| || ||||||||| ||| |||||||||||||  |||| ||||||||||| ||||||||||||||| ||||| |||  ||||||||||||      
T  40204832 tgatattttgaaaatattcatcgagataaatcaaacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttgg 40204931  T
Q  654 atgaataatgca 665  Q
    ||||||| ||||    
T  40204932 atgaatagtgca 40204943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 455 - 650
Target Start/End: Complemental strand, 41264061 - 41263866
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnnttt 554  Q
    ||||||||||||||||  ||||||||||| |||| ||  ||||||| || ||||||||||||||||||||||||| || | |               |||    
T  41264061 tttcaaaatacatgtccaagtcaatcacttcacatataccaatacataattttgaccgttaatatctttaattatctaaagtaaaaaattataaaaattt 41263962  T
Q  555 gatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
     ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  41263961 aatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagt 41263866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 616933 - 616839
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  616933 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 616839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 623326 - 623232
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  623326 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 40494534 - 40494440
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  40494534 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 40494440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 454 - 650
Target Start/End: Original strand, 42587258 - 42587454
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| ||||| ||| ||||||||||||||||||||| || | |               ||    
T  42587258 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcacaatttttaccgttaatatctttaattatctaaagtaaaaaattataaaaatt 42587357  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  42587358 taatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 42587454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 2766160 - 2766254
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  2766160 atattttgaaaatatttttcgagacaaatcaaacaacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagt 2766254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 18044575 - 18044481
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  18044575 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagt 18044481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 32998600 - 32998506
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  32998600 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagt 32998506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 552 - 633
Target Start/End: Complemental strand, 9632309 - 9632228
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||||||| || ||||||||| |||||||||||||||||| |||||||||||||||  ||||||||| ||||| |||||    
T  9632309 tttgatattttgaaaatattcatcgagacaaatcaaacaacatcttacatgctaacattagtatttatatgttagtgaaaaa 9632228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 556 - 633
Target Start/End: Complemental strand, 18090478 - 18090401
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||||| ||||| ||| ||||||||| |||||||| ||| |||||||||||| |||||||||||||||||||||    
T  18090478 atattttaaaaatatttatcgagacaaatcgaacaacatcttatatgctaacatttatatttatatattagttaaaaa 18090401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 454 - 648
Target Start/End: Complemental strand, 38957422 - 38957228
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    ||||||||||| |||||  |||||| |||| |||||||| |||| ||||| ||||||| ||||||||||||||||| || | |               ||    
T  38957422 gtttcaaaatatatgtccaagtcaagcacttcacacatgccaatgcacaattttgacccttaatatctttaattatctaaagtaaaaaattataaaaatt 38957323  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaa 648  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||  ||||||||||| ||| ||||||||||    
T  38957322 taatatttttaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacgttagttaaaaaatatggtcaaagtaa 38957228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 24288012 - 24287937
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||| || ||||  ||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  24288012 gtttcaaaatacatgtcgcaatcaacgacttcacacatgccaatgcacaactttgaccgttaatatctttaattat 24287937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 454 - 650
Target Start/End: Complemental strand, 132269 - 132073
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||| ||||||||||||  ||||||  ||| |||||||| ||||  |||| ||||||||||||||||||||||||| || | |               ||    
T  132269 gttttaaaatacatgtccaagtcaactacttcacacatgccaatgtacaattttgaccgttaatatctttaattatctaaagtaaaaaattataaaaatt 132170  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| |||  |||||||||||    
T  132169 taatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagt 132073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 13216833 - 13216927
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| || |||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  13216833 atattttgaaaatatttgtcgagacaaatcaaacaacatctttcatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagt 13216927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 552 - 622
Target Start/End: Original strand, 32855570 - 32855640
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatata 622  Q
    |||||||||||||| ||||| ||  |||||||||||||||||| |||||||||||||||| ||||||||||    
T  32855570 tttgatattttaaaaatatttattgagacaaatcaaacaacatcttacatgctaacatttgtatttatata 32855640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 455 - 536
Target Start/End: Complemental strand, 9632778 - 9632697
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||| ||||||||||| ||||||| |||| |||||||| ||||||| ||||||| |  ||||||||||||||||||||||||    
T  9632778 tttctaaatacatgtcgcagtcaaccactgcacacatgccaatacataactttggcaattaatatctttaattatatataat 9632697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 556 - 633
Target Start/End: Original strand, 40716635 - 40716712
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||| || ||||| ||  |||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  40716635 atatttttaaaatatttattgagacaaatcaaacaacatcttacatgctaaaatttgtatttatatattagttaaaaa 40716712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 556 - 648
Target Start/End: Original strand, 3100607 - 3100699
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaa 648  Q
    ||||||| || |||||  || ||||||||||| |||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||    
T  3100607 atattttgaaaatatttgtcgagacaaatcaatcaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaa 3100699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 36641970 - 36642065
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa-ttatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||||| | || ||||||||||||    
T  36641970 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatataagttaaaaagtaatggtcaaagtaagt 36642065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 650
Target Start/End: Original strand, 4270225 - 4270298
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| ||||||| ||||||| ||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  4270225 agacaaatcacacaacatattacatgttaatatttgtatttatacattagttaaaaaatatggtcaaagtaagt 4270298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 650
Target Start/End: Complemental strand, 5878445 - 5878372
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||||||||| | || ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  5878445 agacaaatcaaacgatatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagt 5878372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 3370391 - 3370462
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||||||||| || ||||||  |||||||| ||||||||||||| ||||||| ||| ||||||||||||    
T  3370391 acaaatcaaacaatatcttacatattaacatttgtatttatatattaattaaaaaatatggtcaaagtaagt 3370462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 8394496 - 8394402
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| |||||  || |||||||||||||||||| ||| || |||| |||| || ||||| |||||||||||| | | ||||||||||||    
T  8394496 atattttaaaaatatttgtcgagacaaatcaaacaacatcttaaatactaatatttgtacttatacattagttaaaaaatttggtcaaagtaagt 8394402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 556 - 660
Target Start/End: Complemental strand, 5173402 - 5173297
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaac-aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttata 654  Q
    |||||||||| ||||| ||| ||| |||| |||| ||||| ||||||| ||| |||| ||||||||||||||||||| | |||  ||||||||| | |||    
T  5173402 atattttaaatatatttatcgagataaatgaaactaacatcttacatgttaatatttgtatttatatattagttaaataatatgatcaaagtaaatcata 5173303  T
Q  655 tgaata 660  Q
    ||||||    
T  5173302 tgaata 5173297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 6414077 - 6414186
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || | ||| ||| ||||||||| ||||||||||||||| | ||  |||  |||||||||||| ||||||| ||| |||||||||||| || |    
T  6414077 atattttgaaaacatttatcgagacaaatcgaacaacattttacataccaatctttgcatttatatattatttaaaaagtatggtcaaagtaagtcatgt 6414176  T
Q  656 gaataatgca 665  Q
    ||||| ||||    
T  6414177 gaatagtgca 6414186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 24570285 - 24570217
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaagagcatctccac 209  Q
    ||||||||||||||| |||||||||||||| |  || ||||||||||||||||||||| | |||||||||    
T  24570285 tgatgactaaatttgacaaatgcaccaaactgcgtt-aagtaataaagtagtaagtaaaatcatctccac 24570217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 581 - 634
Target Start/End: Original strand, 33905465 - 33905518
Alignment:
Q  581 aaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaat 634  Q
    |||| ||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  33905465 aaataaaacaacattttatatgctaacatttatatttttatattagttaaaaat 33905518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 669
Target Start/End: Original strand, 21109809 - 21109906
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagtt-aaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||  |||||||||||||||||| ||||||||||||      |||| |||||||||| ||||| | | |||||||||||| || |||||||||||    
T  21109809 atattcattgagacaaatcaaacaacatcttacatgctaac------atttgtatattagttaaaaaaatgtggtcaaagtaagtaatgtgaataatgca 21109902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 22489385 - 22489480
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatg-ctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| || |||  |||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  22489385 atattttgaaaatatttgtcgagacaaatcaaacaacatcttgcattactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 22489480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 35403666 - 35403575
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagta 647  Q
    |||||| ||| |||||  || |||||||| ||||||||| ||||||| ||| || | |||||||| |||||||||||| ||| |||||||||    
T  35403666 atatttaaaaaatatttgtcgagacaaattaaacaacatcttacatgttaatatctgtatttatacattagttaaaaagtatggtcaaagta 35403575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 11637932 - 11637838
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| |||||  || ||| |||||||||||||| ||||||||||| | || |||||||| | |||||||||| ||  |||||| |||||    
T  11637932 atattttaaaaatatttgtcgagataaatcaaacaacatcttacatgctaatacttgtatttatacactagttaaaaagtacggtcaaaataagt 11637838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 587 - 665
Target Start/End: Complemental strand, 36919741 - 36919664
Alignment:
Q  587 aacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    |||||||||||  || |||| |||| ||||||||||||| ||||||| ||| || ||| ||||||||||||||||||||    
T  36919741 aacaacattttcaatactaatatttatatttatatattaattaaaaa-tatggttaaaataagttatatgaataatgca 36919664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 579 - 633
Target Start/End: Complemental strand, 38497199 - 38497145
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||||||||||| || |||||||| |||| |||||||| ||||||||||||    
T  38497199 acaaatcaaacaacatcttccatgctaatatttgtatttatacattagttaaaaa 38497145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 623428 - 623355
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  623428 gtttcaaaatacatgtccaagtcaaccacttcacatatgtcaatgcataattttgactgttaatatctttaatt 623355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 665
Target Start/End: Original strand, 11162380 - 11162479
Alignment:
Q  562 taaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataa 661  Q
    |||| ||||||||| |||||||||||||| | |||   |||||||||||| | |||||||||||| |||||| ||| ||||||||| ||| ||| ||||     
T  11162380 taaaaatattcatcgagacaaatcaaacatctttt---atgctaacatttgtctttatatattag-taaaaaatatggtcaaagtatgttttattaatag 11162475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 590
Target Start/End: Original strand, 35303237 - 35303274
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaaca 590  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  35303237 ttgatattttaaaaatattcatcaagacaaatcaaaca 35303274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 36641868 - 36641941
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  36641868 gtttcaaaatacatgtctaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 36641941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 625
Target Start/End: Original strand, 38958873 - 38958942
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatatta 625  Q
    |||||||||| |||||  || |||||||||||||||||| ||||||  ||| ||||||||||||| ||||    
T  38958873 atattttaaaaatatttgtcgagacaaatcaaacaacatcttacatattaatatttttatttatacatta 38958942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 569 - 625
Target Start/End: Complemental strand, 7430970 - 7430914
Alignment:
Q  569 attcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatatta 625  Q
    ||||||| |||||||||| ||||||| ||| |||||| ||||| |||||||||||||    
T  7430970 attcatcgagacaaatcatacaacatcttatatgctaccatttgtatttatatatta 7430914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 18044678 - 18044602
Alignment:
Q  454 gtttcaaaatacatgtc-acagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||  | |||||| |||| |||| ||| |||| ||||| ||||||||||||||| |||||||||    
T  18044678 gtttcaaaatacatgtataaagtcaaccacttcacatatgccaatgcacaattttgaccgttaatatatttaattat 18044602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 553 - 637
Target Start/End: Original strand, 34327171 - 34327255
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattat 637  Q
    ||||||||||||  ||||||||| ||| |||||||| || |||||| ||  |||||||| | ||||||||||| | |||||||||    
T  34327171 ttgatattttaagaatattcatcgagataaatcaaaaaatattttatatattaacatttatctttatatattaataaaaaattat 34327255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 556 - 602
Target Start/End: Original strand, 14522492 - 14522538
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatg 602  Q
    |||||||||| |||||||||||||| |||| |||||||| |||||||    
T  14522492 atattttaaaaatattcatcaagacgaatccaacaacatcttacatg 14522538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 455 - 529
Target Start/End: Original strand, 22489285 - 22489359
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||   |||||| ||||  ||| ||| |||| ||||| ||||| |||||||||||||||||||    
T  22489285 tttcaaaatacatgtttaagtcaaccacttaacatatgtcaatgcacaattttgatcgttaatatctttaattat 22489359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 456 - 529
Target Start/End: Original strand, 4461483 - 4461556
Alignment:
Q  456 ttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||   |||||  ||| |||||||||| || ||||| ||||||  |||||||||||||||||    
T  4461483 ttcaaaatacatgtcgttgtcaactacttcacacatgacgatgcacaattttgactattaatatctttaattat 4461556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 667
Target Start/End: Original strand, 8181956 - 8182037
Alignment:
Q  587 aacaacattttacatgctaacatttttatttatata-ttagttaaaaattatagtcaaagtaagttatatgaataatgcata 667  Q
    |||||||| ||||||  ||| |||| |||||||||| ||| ||||||| |||  ||| ||||| ||||||||||||||||||    
T  8181956 aacaacatcttacattgtaatatttgtatttatataattaattaaaaaatatgatcatagtaaattatatgaataatgcata 8182037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 14141902 - 14141841
Alignment:
Q  136 cccctgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||| |||||| |||||| ||| | ||||||| ||||| ||||||||||||| ||||||||    
T  14141902 cccctaatgacttaatttggcaagtacaccaaatcgtttccaagtaataaagtggtaagtaa 14141841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 14145339 - 14145278
Alignment:
Q  136 cccctgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||| |||||| |||||| ||| | ||||||| ||||| ||||||||||||| ||||||||    
T  14145339 cccctaatgacttaatttggcaagtacaccaaatcgtttccaagtaataaagtggtaagtaa 14145278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 491
Target Start/End: Complemental strand, 24730111 - 24730074
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacat 491  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  24730111 gtttcaaaatacatgtcgcagtcaatcacttcacacat 24730074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 553 - 602
Target Start/End: Original strand, 25256442 - 25256491
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatg 602  Q
    ||||||||||||| |||||||||| ||| |||| |||||||| |||||||    
T  25256442 ttgatattttaaaaatattcatcatgacgaatccaacaacatcttacatg 25256491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 480 - 529
Target Start/End: Complemental strand, 32998675 - 32998626
Alignment:
Q  480 cactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||| |||| ||| |||| ||||| |||||||||||||||||||||||||    
T  32998675 cacttcacatatgccaatgcacaattttgaccgttaatatctttaattat 32998626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 444 - 529
Target Start/End: Original strand, 38958761 - 38958846
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||| || ||||||||| ||||||   |||||| |||| |||| ||| |||| ||||| ||||||  |||||||||||||||||    
T  38958761 tactcccttcgtttcaaaacacatgttcaagtcaaccacttcacatatgtcaatgcacaattttgactattaatatctttaattat 38958846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 40494636 - 40494563
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || ||||||  |||||||||||||||    
T  40494636 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactattaatatctttaatt 40494563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 1e-34; HSPs: 93)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 455 - 644
Target Start/End: Complemental strand, 5529262 - 5529073
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnnttt 554  Q
    |||||||||| ||| | ||| |||||||| |||||||| ||||| |||||||||||| ||||||||||||||||||||||||               |||    
T  5529262 tttcaaaatatatgccgcagacaatcactgcacacatgtcaataaacaactttgaccattaatatctttaattatatataataaaaaattataaaaattt 5529163  T
Q  555 gatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaa 644  Q
    |||||||| || ||||| ||  |||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  5529162 gatattttgaaaatattgattgagacaaatcaaataacatcttacatgctaacatttttatttgtatattagttaaaaaatatagtcaaa 5529073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 454 - 669
Target Start/End: Complemental strand, 3785772 - 3785557
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    ||||||||||||||||| ||||||| || | ||| |||   ||||||||||||||| | ||||||||||||||||||||||||               ||    
T  3785772 gtttcaaaatacatgtcgcagtcaaccattgcactcatacaaatacacaactttgatcattaatatctttaattatatataataaaagattataaaaatt 3785673  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    |||||||||||| ||||| ||| ||||||||||||||||||  |  || ||||||||| ||||||||||||||||||||| ||| ||||||||||  |||    
T  3785672 tgatattttaaaaatatttatctagacaaatcaaacaacatcctgtatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactat 3785573  T
Q  654 atgaataatgcatatt 669  Q
    ||||||| ||||||||    
T  3785572 atgaatagtgcatatt 3785557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 567 - 678
Target Start/End: Original strand, 6766673 - 6766784
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcat 666  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||| ||| |||||| |||||||| |||||||||||     
T  6766673 atattcatcgagacaaatcaaacaacatcttacatgctaacatttgcatttatacattagttaaaaaatatggtcaaaataagttatgtgaataatgcag 6766772  T
Q  667 attatacaattg 678  Q
    ||| || |||||    
T  6766773 attgtaaaattg 6766784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 454 - 649
Target Start/End: Complemental strand, 16778757 - 16778562
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| ||||| ||||||||||||||||||||||||| || | |               ||    
T  16778757 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcacaattttgaccgttaatatctttaattatctaaagtaaaatattataaaaatt 16778658  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaag 649  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||| |||||||||||    
T  16778657 taatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaattatggtcaaagtaag 16778562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 455 - 650
Target Start/End: Complemental strand, 20885354 - 20885159
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnnttt 554  Q
    ||||||||||||||||  |||||| |||| |||||||| |||| ||||| ||||||||||||||||||||||||| || | |               |||    
T  20885354 tttcaaaatacatgtccaagtcaaccacttcacacatgccaatgcacaattttgaccgttaatatctttaattatctaaagtaaaaaattataaaaattt 20885255  T
Q  555 gatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
     ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  20885254 aatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagt 20885159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 552 - 678
Target Start/End: Original strand, 49101921 - 49102047
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||| ||||| ||||||||| |||||||||||||||||| |||||||| || |||| ||||||| ||||||||||||| |||    ||| ||||||    
T  49101921 tttgatatcttaaaaatattcatcgagacaaatcaaacaacatcttacatgcaaaaatttgtatttatgtattagttaaaaaatatgacaaaaataagtt 49102020  T
Q  652 atatgaataatgcatattatacaattg 678  Q
    ||||||||| |||||||| || |||||    
T  49102021 atatgaatagtgcatattgtaaaattg 49102047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 556 - 665
Target Start/End: Complemental strand, 48602586 - 48602477
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||| | ||    
T  48602586 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaat 48602487  T
Q  656 gaataatgca 665  Q
    ||||| ||||    
T  48602486 gaatagtgca 48602477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 577 - 669
Target Start/End: Original strand, 16870613 - 16870705
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatt 669  Q
    |||||||||||| |||||||||| ||| ||||||| |||||||||||||||||| || ||| ||||||||||||||| |||||| ||||||||    
T  16870613 agacaaatcaaataacattttacgtgcaaacatttatatttatatattagttaacaaatatggtcaaagtaagttatttgaatagtgcatatt 16870705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 552 - 648
Target Start/End: Original strand, 27045516 - 27045612
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaa 648  Q
    ||||||||||| || ||||||||| || ||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  27045516 tttgatattttgaaaatattcatcgaggcaaattaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaa 27045612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 577 - 660
Target Start/End: Original strand, 4131636 - 4131719
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| ||| || |||||||||||| ||||||    
T  4131636 agacaaatcaaacaacatcttacatgctaacttttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaata 4131719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 552 - 703
Target Start/End: Original strand, 49110578 - 49110724
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || |||||||| || | ||||||||||| |||||||||  |||||||| |||| |||||||||||||||| ||| |||||||||| |     
T  49110578 tttgatattttgaaaatattcattaacagaaatcaaacaatattttacatcataacatttgtattaatatattagttaaaaaatatggtcaaagtaaatc 49110677  T
Q  652 atatgaataatgcatattatacaattgatttgtgacatgtattttaaaacgg 703  Q
    || |||||| | || |||||| ||     |||||||||||||||||||||||    
T  49110678 atttgaatagtacacattataaaa-----ttgtgacatgtattttaaaacgg 49110724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 454 - 670
Target Start/End: Original strand, 11502590 - 11502806
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||| |||||| |||| |||| ||| |||| ||||| ||||||||||||||| |||||||||||| | |               ||    
T  11502590 gtttcaaaatacatgtcaaagtcaaccacttcacatatgccaatgcacaattttgaccgttaatatatttaattatataaagtaaaaaattataaaaatt 11502689  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | ||||||| || |||||  |  ||||||||||||| |||| ||||||||||| |||| |||||||| |||||||||||| |||  |||||||||||||     
T  11502690 taatattttgaaaatatttgtttagacaaatcaaacgacatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagttaa 11502789  T
Q  654 atgaataatgcatatta 670  Q
     | ||||||||| ||||    
T  11502790 gtcaataatgcacatta 11502806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 28061627 - 28061721
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  28061627 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 28061721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 36623458 - 36623364
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  36623458 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 36623364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 46479979 - 46479885
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||| | ||||||||||||    
T  46479979 atattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaattttggtcaaagtaagt 46479885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 47156177 - 47156083
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  47156177 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 47156083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 556 - 669
Target Start/End: Complemental strand, 7439053 - 7438940
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| |||||| ||||| |  |    
T  7439053 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagt 7438954  T
Q  656 gaataatgcatatt 669  Q
    ||||||||||||||    
T  7438953 gaataatgcatatt 7438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 577 - 670
Target Start/End: Complemental strand, 42877515 - 42877422
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatta 670  Q
    |||||||||||||||||| |||||| |||| ||||||||||||| |||||||||||| ||| |||||||||||||| || |||| |||| ||||    
T  42877515 agacaaatcaaacaacatcttacattctaatatttttatttatacattagttaaaaagtatggtcaaagtaagttaaattaatagtgcacatta 42877422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 42890455 - 42890564
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| |||||| ||||| | ||    
T  42890455 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaaat 42890554  T
Q  656 gaataatgca 665  Q
    ||||| ||||    
T  42890555 gaatagtgca 42890564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 443 - 665
Target Start/End: Original strand, 32431357 - 32431579
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnn 542  Q
    |||||||||  |||||||||||||||||  |||||| ||||  ||| ||| |||| ||||| ||||||||||||| ||||||||||| ||||            
T  32431357 atactccatccgtttcaaaatacatgtccaagtcaaccactttacatatgccaatgcacaattttgaccgttaatgtctttaattatctatagcaaaaaa 32431456  T
Q  543 nnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtca 642  Q
             ||| | ||||| || ||||| ||| |||||||||||||||||| |||||| |||| |||| |||||||| |||||||||||| ||| ||||    
T  32431457 ttataaaaatttaacattttgaaaatatttatcgagacaaatcaaacaacatcttacatactaatatttgtatttatacattagttaaaaagtatggtca 32431556  T
Q  643 aagtaagttatatgaataatgca 665  Q
    |||||||| |  |||||||||||    
T  32431557 aagtaagtcaagtgaataatgca 32431579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 460 - 650
Target Start/End: Complemental strand, 44732258 - 44732068
Alignment:
Q  460 aaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgatat 559  Q
    |||||||||||  ||||||||||| |||||||  ||||  |||| |||||||||||||||||||||||||||| | |               ||| ||||    
T  44732258 aaatacatgtccaagtcaatcacttcacacatatcaatgtacaattttgaccgttaatatctttaattatataaagtagaaaattataaaaatttaatat 44732159  T
Q  560 tttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| |||  |||||||||||    
T  44732158 tttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagt 44732068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 46103505 - 46103576
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  46103505 acaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 46103576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 455 - 633
Target Start/End: Original strand, 24423607 - 24423780
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnnttt 554  Q
    |||||||||||||||| ||||||| |||| |||||||  ||||||| |||||||||| |||||||||||| |||||||||||               |||    
T  24423607 tttcaaaatacatgtcgcagtcaaccactgcacacattccaatacataactttgaccattaatatctttatttatatataat--aaaattattaaaattt 24423704  T
Q  555 gatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||||||| |||||||||| |||||||||   ||||| || |||| ||| |||| ||||||||| |||||||||||    
T  24423705 gatattttaaaaatattcatcatgacaaatca---aacatcttgcatgataagatttatatttatattttagttaaaaa 24423780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 38851959 - 38852053
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || ||||||||||||||| || ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  38851959 atattttgaaaatatttgtcgagacaaatcaaacaatatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 38852053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 454 - 650
Target Start/End: Original strand, 39129936 - 39130132
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||| ||||||  ||| |||| ||| |||| ||| | ||||||||||||||| |||||||||||| | |               ||    
T  39129936 gtttcaaaatacatgtcaaagtcaactacttcacatatgccaatgcacgattttgaccgttaatatttttaattatataaagtaaaaaattataaaaatt 39130035  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||| ||||    
T  39130036 taatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagaaagt 39130132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 40090030 - 40090124
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  40090030 atattttgaaaatatttgtcgagataaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 40090124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 553 - 643
Target Start/End: Original strand, 28601580 - 28601668
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatat-attagttaaaaattatagtcaa 643  Q
    ||||||||||||| ||||||||| ||||||||||   |||||||||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  28601580 ttgatattttaaaaatattcatcgagacaaatca---aacattttacatgctaacatttatatttatataattaattaaaaaatatagtcaa 28601668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 556 - 665
Target Start/End: Complemental strand, 30342224 - 30342115
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || ||||| ||| ||||||||||||| |||| |||||| |||| |||| |||||||| |||||||||||| |||||||||||||| | |  |    
T  30342224 atattttgaaaatatttatcgagacaaatcaaacgacatcttacatactaatatttgtatttatacattagttaaaaagtatagtcaaagtaaatcaagt 30342125  T
Q  656 gaataatgca 665  Q
    ||||||||||    
T  30342124 gaataatgca 30342115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 577 - 650
Target Start/End: Complemental strand, 40256186 - 40256113
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  40256186 agacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 40256113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 560 - 633
Target Start/End: Original strand, 47525952 - 47526025
Alignment:
Q  560 tttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||| ||||||||||||||||||| ||||| || ||| |||||||||||| |||||||||||||||||||||    
T  47525952 tttaaaaatattcatcaagacaaatcgaacaagatcttaaatgctaacatttgtatttatatattagttaaaaa 47526025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 454 - 650
Target Start/End: Complemental strand, 41898240 - 41898044
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  ||||||||||| |||| ||| |||| || || |||||| |||||||||||||||| | || | |               ||    
T  41898240 gtttcaaaatacatgtccaagtcaatcacttcacatatgccaatgcataattttgactgttaatatctttaattttctaaagtaaaaaattataaaaatt 41898141  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | ||||||| || |||||  || |||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||| |||  |||||||||||    
T  41898140 taatattttgaaaatatttgtcgagacaaatgaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagt 41898044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 556 - 669
Target Start/End: Complemental strand, 35117275 - 35117163
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| ||||||| |||| ||| |||||||||||| |  |    
T  35117275 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttatatttatacattagtt-aaaagtatggtcaaagtaagtcaagt 35117177  T
Q  656 gaataatgcatatt 669  Q
    ||||| ||||||||    
T  35117176 gaatagtgcatatt 35117163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 581 - 669
Target Start/End: Original strand, 4048871 - 4048958
Alignment:
Q  581 aaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatt 669  Q
    |||||||||||||  ||||| |||| ||||| ||||||||||||||||||||| |||||| ||||||| |||| |||||||| ||||||    
T  4048871 aaatcaaacaacaacttacaagctagcatttgtatttatatattagttaaaaaatatagt-aaagtaaattatttgaataatacatatt 4048958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 443 - 527
Target Start/End: Complemental strand, 36585925 - 36585841
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||| |||||||||||||||||  |||||| |||| |||| ||| ||| ||| || |||||||||||||||||||||||    
T  36585925 atactccattcgtttcaaaatacatgtccaagtcaagcacttcacatatgccaacacataattttgaccgttaatatctttaatt 36585841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 37467317 - 37467392
Alignment:
Q  459 aaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatata 534  Q
    ||||||||||||||| ||||| ||| ||||||||  ||||||||||||||| | ||||||| ||||||||||||||    
T  37467317 aaaatacatgtcacaatcaattactgcacacatgttaatacacaactttgatcattaatatttttaattatatata 37467392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 577 - 665
Target Start/End: Complemental strand, 8683944 - 8683859
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    |||||||||||||||||| ||   |||||| |||| ||||||||||||||||||||| ||| |||||||||||| |  |||||||||||    
T  8683944 agacaaatcaaacaacatctt---tgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaataatgca 8683859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 12866622 - 12866679
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||    
T  12866622 tgatgactaaatttaacaagtgcaccaaaccgttttcacgtaataaagtagtaagtaa 12866679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 633
Target Start/End: Original strand, 35570157 - 35570238
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||||||| || ||||| ||| |||||||||  ||||||| ||||||||||| |||| ||||| |||||||||||||||    
T  35570157 tttgatattttgaaaatatttatcgagacaaatcgtacaacatcttacatgctaaaatttgtatttgtatattagttaaaaa 35570238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 454 - 523
Target Start/End: Complemental strand, 36516091 - 36516022
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatcttt 523  Q
    ||||| |||||||||||| |||||| |||| | |||||| |||||||||||||||||| |||||||||||    
T  36516091 gtttctaaatacatgtcagagtcaaccacttcgcacatgccaatacacaactttgaccattaatatcttt 36516022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 669
Target Start/End: Complemental strand, 41088737 - 41088624
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| |||||  || ||||||||||  |||||| ||||||| ||| ||||  ||||||| |||||||||||| ||| |||||||||||| | ||    
T  41088737 atattttaaaaatatttgtcgagacaaatcatgcaacatcttacatgttaatatttgcatttatacattagttaaaaaatatggtcaaagtaagtcagat 41088638  T
Q  656 gaataatgcatatt 669  Q
    ||| | ||||||||    
T  41088637 gaacagtgcatatt 41088624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 586 - 650
Target Start/End: Original strand, 7457864 - 7457928
Alignment:
Q  586 aaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  7457864 aaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 7457928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 461 - 536
Target Start/End: Original strand, 49101827 - 49101902
Alignment:
Q  461 aatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||| ||||| |||| || |||| |||||||||||||||||||| |||| | |||||||||||||| |||||||||    
T  49101827 aatatatgtcgcagttaaccactgcacacatgacaatacacaacattgatcattaatatctttaatcatatataat 49101902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 458 - 624
Target Start/End: Complemental strand, 2952695 - 2952532
Alignment:
Q  458 caaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgat 557  Q
    |||||||||||||  |||||| |||| | ||||||    ||||||||||||||| ||||||||||||||||||||||||               ||| ||    
T  2952695 caaaatacatgtcgtagtcaaccactgcgcacatgc---tacacaactttgaccattaatatctttaattatatataataaaaaattataaaattttaat 2952599  T
Q  558 attttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatatt 624  Q
    ||||| || ||||||||  ||| ||||||| |||||| |||||||||||||||| ||||||| ||||    
T  2952598 attttgaaaatattcatttagaaaaatcaagcaacatcttacatgctaacatttatatttatttatt 2952532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 454 - 536
Target Start/End: Original strand, 6766557 - 6766639
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||| |||||||||||  || ||||||||| || ||||| ||| |||||||||| ||| |||||||||||||||||| |||||    
T  6766557 gttttaaaatacatgttgcactcaatcactgcatacatgccaacacacaacttttaccattaatatctttaattatacataat 6766639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 467 - 529
Target Start/End: Complemental strand, 26161838 - 26161776
Alignment:
Q  467 tgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||| |||||||||||| |||||||| |||| ||||||||||||||||||||| || ||||||    
T  26161838 tgtcgcagtcaatcacttcacacatgtcaatgcacaactttgaccgttaatattttcaattat 26161776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 553 - 627
Target Start/End: Complemental strand, 33010349 - 33010275
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagt 627  Q
    |||||||||| || |||||||||||||||||||  |||| |||||| ||| |||||||| | |||||||||||||    
T  33010349 ttgatattttgaaaatattcatcaagacaaatccgacaatattttatatgataacatttgtctttatatattagt 33010275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 579 - 665
Target Start/End: Complemental strand, 36341747 - 36341661
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||| ||||||||||| ||| || ||| ||||| || |||||| ||||    
T  36341747 acaaatcgaacaacatcttacattctaacatttatatttatatgttagttaaaaagtatcgttaaattaagtcatgtgaatagtgca 36341661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 36585259 - 36585165
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| ||||||| |||| ||| || ||| |||||    
T  36585259 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagtttaaaagtatggtaaaaataagt 36585165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 587 - 653
Target Start/End: Original strand, 38767202 - 38767268
Alignment:
Q  587 aacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    |||||||| ||| || || |||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  38767202 aacaacatcttatatactgacatttgtatttatatattagttaaaaaatatggtcaaagtaagttat 38767268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 444 - 529
Target Start/End: Complemental strand, 3851336 - 3851251
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||  ||||||||||  |||||  |||||| |||| |||| ||| |||| ||||| |||||||||||||||||||||||||    
T  3851336 tactccatccgtttcaaaatgtatgtctaagtcaaccacttcacatatgccaatgcacaattttgaccgttaatatctttaattat 3851251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 553 - 634
Target Start/End: Original strand, 19120639 - 19120720
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaat 634  Q
    ||||||||||||| ||||| ||  |||||| |||| ||| || ||||||||||| |||| ||||||||||||| ||||||||    
T  19120639 ttgatattttaaaaatatttattgagacaagtcaaccaatatcttacatgctaatatttatatttatatattaattaaaaat 19120720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 556 - 633
Target Start/End: Complemental strand, 21379894 - 21379817
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| ||||| ||||||    
T  21379894 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagctaaaaa 21379817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 24823130 - 24823187
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||||||||||||| ||| || | |||||||||||||||||||||| ||||||||||    
T  24823130 tgatgactaaatttggcaagtgtatcaaaccgttttcaagtaataaaatagtaagtaa 24823187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 590 - 675
Target Start/End: Complemental strand, 26161712 - 26161627
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaa 675  Q
    ||||||||||||||||| |||| |||||||||||||||||||||  || |||||| ||| | || |||||| |||  |||||||||    
T  26161712 aacattttacatgctaatatttgtatttatatattagttaaaaagcatggtcaaaataaatcatgtgaatagtgcgcattatacaa 26161627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 556 - 669
Target Start/End: Complemental strand, 45332067 - 45331949
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttat-ttatatattagt----taaaaattatagtcaaagtaagt 650  Q
    ||||||| || ||||| |||||||||||||||||||||| ||||| | | | |||| ||| ||||||||  ||    |||||| ||| ||||||||||||    
T  45332067 atattttgaaaatatttatcaagacaaatcaaacaacatcttacaagttcatatttatatattatatatacgtgtgttaaaaaatatggtcaaagtaagt 45331968  T
Q  651 tatatgaataatgcatatt 669  Q
     ||||||||||||||||||    
T  45331967 catatgaataatgcatatt 45331949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 578 - 650
Target Start/End: Complemental strand, 3851202 - 3851130
Alignment:
Q  578 gacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||||||| || |||| || ||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  3851202 gacaaatcaaacaatatcttacgtgttaatatttgtatttatacattagttaaaaagtattgtcaaagtaagt 3851130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 590 - 650
Target Start/End: Complemental strand, 34750618 - 34750558
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||| ||  ||||||||||||    
T  34750618 aacatcttacatgttaacatttttatttgtatattagttaaaaagtagggtcaaagtaagt 34750558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 660
Target Start/End: Complemental strand, 36515993 - 36515885
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || | ||||||  ||||||||  |||||||| ||| || ||||||||| ||||||||||||  ||||||| ||| || ||||||||||    
T  36515993 tttgatattttgaaaacattcattgagacaaattgaacaacatcttatatactaacatttgtatttatatattgattaaaaaatatggttaaagtaagtt 36515894  T
Q  652 atatgaata 660  Q
     | ||||||    
T  36515893 gtgtgaata 36515885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 648
Target Start/End: Original strand, 37467444 - 37467511
Alignment:
Q  580 caaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaa 648  Q
    |||||||||||| || ||| |||||||||||| ||||||||||||||||||||| ||| || |||||||    
T  37467444 caaatcaaacaa-atcttaaatgctaacatttgtatttatatattagttaaaaaatatggttaaagtaa 37467511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 590 - 638
Target Start/End: Original strand, 39278477 - 39278525
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattata 638  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  39278477 aacattttacatactaacatttatatttatatattagttaaaaaatata 39278525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 629
Target Start/End: Original strand, 41134621 - 41134673
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagtta 629  Q
    |||||||||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  41134621 agacaaatcaaacaacatcttacatgctaatatttgtatttatacattagtta 41134673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 529
Target Start/End: Complemental strand, 42662441 - 42662369
Alignment:
Q  457 tcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||| ||||||| |||| ||||||||   |||||||| ||| ||| |||||||||||||||||    
T  42662441 tcaaaatacatgtcgcagtcaaacacttcacacatgctgatacacaattttaaccattaatatctttaattat 42662369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 42877639 - 42877563
Alignment:
Q  453 tgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||||  |||||| |||| |||| ||| |||| ||||  |||||||||| ||||||||||||||    
T  42877639 tgtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcacagttttgaccgttgatatctttaattat 42877563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 485 - 536
Target Start/End: Original strand, 4131547 - 4131598
Alignment:
Q  485 cacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||||| || ||||||||||||||| |||||||||||||| |||||||||    
T  4131547 cacacatgccactacacaactttgaccattaatatctttaatcatatataat 4131598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 4239425 - 4239370
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagt 195  Q
    |||||||||||||||| || |||||||| |||||||||||||||| | ||||||||    
T  4239425 tgatgactaaatttgtgaagtgcaccaacccgttttcaagtaatacaatagtaagt 4239370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 454 - 529
Target Start/End: Original strand, 25566558 - 25566633
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||||  |||||| || | |||| ||| ||||  |||| |||||||||||||||||||||||||    
T  25566558 gtttcaaaatacatgtccaagtcaaccatttcacatatgccaatgtacaattttgaccgttaatatctttaattat 25566633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 459 - 526
Target Start/End: Original strand, 26189805 - 26189872
Alignment:
Q  459 aaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaat 526  Q
    ||||||||||||  |||||| || | |||||||| ||| ||||||||||||||||| |||||||||||    
T  26189805 aaaatacatgtcgtagtcaaccatttcacacatgccaaaacacaactttgaccgttgatatctttaat 26189872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 460 - 535
Target Start/End: Original strand, 38767082 - 38767157
Alignment:
Q  460 aaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataa 535  Q
    ||||||||||  ||||||| || | |||||||| ||||||| |||||||||| |||||||||||| |||| |||||    
T  38767082 aaatacatgttgcagtcaaccaattcacacatgtcaatacaaaactttgaccattaatatctttagttatctataa 38767157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 40256308 - 40256233
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||   ||||||  ||| ||||||||  ||| ||||| |||||||||||||||||||||||||    
T  40256308 gtttcaaaatacatgttcaagtcaactacttcacacatgcaaatgcacaattttgaccgttaatatctttaattat 40256233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 5788489 - 5788583
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| |||||| |||| |||| |||||||| |||||| ||||| |||  | |||||||||    
T  5788489 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatactaatatttgtatttatacattagtaaaaaagtatgattaaagtaagt 5788583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 590 - 648
Target Start/End: Complemental strand, 7169242 - 7169184
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaa 648  Q
    ||||| ||| ||| ||| |||| ||||||||||||||||||||| ||||||||||||||    
T  7169242 aacatcttatatgttaatatttgtatttatatattagttaaaaaatatagtcaaagtaa 7169184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 25566660 - 25566753
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| |||||  |  |||||||||||||||||| | ||||||||| |||| || ||||| |||||||| ||| ||| ||||||||||||    
T  25566660 atattttaaaaatatttgttgagacaaatcaaacaacatctcacatgctaatatttgta-ttatacattagttagaaagtatggtcaaagtaagt 25566753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 454 - 532
Target Start/End: Original strand, 46103380 - 46103458
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatata 532  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| |||||||||||||||| ||||    
T  46103380 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaattttata 46103458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 443 - 529
Target Start/End: Original strand, 46321151 - 46321237
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||| | ||||||||||||||||||  | |||| ||||  ||| |||  ||| ||||| |||||||||||||||||||||||||    
T  46321151 atactccctctgtttcaaaatacatgtccaaatcaaccactttacatatgctaatgcacaattttgaccgttaatatctttaattat 46321237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 454 - 536
Target Start/End: Original strand, 47525864 - 47525946
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    ||||||||||||||||| |||||||  ||||||||||||  |||||| || |||||   ||||||| ||| ||||||||||||    
T  47525864 gtttcaaaatacatgtcgcagtcaactactacacacatgttaatacataattttgattattaatattttttattatatataat 47525946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 36623560 - 36623487
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  36623560 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 36623487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 47156279 - 47156206
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  47156279 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 47156206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 48602688 - 48602615
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  48602688 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 48602615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 577 - 633
Target Start/End: Complemental strand, 2198731 - 2198675
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||||||||||||| |||| || ||| |||| |||||||| ||||||||||||    
T  2198731 agacaaatcaaacaacatcttacttgttaatatttgtatttatacattagttaaaaa 2198675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 652
Target Start/End: Complemental strand, 38069204 - 38069104
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||||||||| ||||||||| |||| |||| ||| |||| ||| ||| ||  |||| | ||| |||||||||  |||| ||| |||||||||||||    
T  38069204 tttgatattttaaaaatattcatcgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagtt 38069105  T
Q  652 a 652  Q
    |    
T  38069104 a 38069104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 665
Target Start/End: Complemental strand, 6174952 - 6174877
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||| |||||||||||  ||| |||||||| |||||||||||| ||| |||| ||||||| | ||||||| ||||    
T  6174952 aacatcttacatgctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagtcaaatgaatagtgca 6174877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 7169375 - 7169300
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||| |||||||||||||  | | || | ||| |||| ||||| ||||| |||||||||||||||||||    
T  7169375 gtttcaaaatatatgtcacagtcaactatttcatatatgtcaatgcacaattttgatcgttaatatctttaattat 7169300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 7439155 - 7439080
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||| ||||||||||||   |||||||||| |||| ||  |||| ||||| |||||| ||||||||||||||||||    
T  7439155 gttttaaaatacatgtccaggtcaatcacttcacatataccaatgcacaattttgacagttaatatctttaattat 7439080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 635
Target Start/End: Original strand, 23707535 - 23707614
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaatt 635  Q
    ||||||| || |||||  || |||||||||||| || || | ||||||||| |||| |||||||| ||||||||||||||    
T  23707535 atattttgaaaatatttgtcgagacaaatcaaataatatctcacatgctaatatttgtatttatacattagttaaaaatt 23707614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 611
Target Start/End: Original strand, 46321264 - 46321319
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacattt 611  Q
    ||||||| || ||||| |||||||||||||||| ||||| ||||||||||| ||||    
T  46321264 atattttgaaaatatttatcaagacaaatcaaataacatcttacatgctaatattt 46321319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 661
Target Start/End: Complemental strand, 46322397 - 46322322
Alignment:
Q  586 aaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataa 661  Q
    |||| |||||||||||  |||||||| ||||||||| ||  ||||||| ||  |||||||||| ||||||||||||    
T  46322397 aaacgacattttacatattaacatttatatttatattttgattaaaaaataaggtcaaagtaatttatatgaataa 46322322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 660
Target Start/End: Complemental strand, 47096367 - 47096321
Alignment:
Q  613 tatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  47096367 tatttatatattagttaaaa-ttatagtcaaaataaattatatgaata 47096321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 665
Target Start/End: Original strand, 8898612 - 8898662
Alignment:
Q  615 tttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||||  |||||||||||||| |||||| ||||||| |||||||||    
T  8898612 tttatatatttattaaaaattatagttaaagtatgttatataaataatgca 8898662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 628 - 678
Target Start/End: Complemental strand, 26980125 - 26980075
Alignment:
Q  628 taaaaattatagtcaaagtaagttatatgaataatgcatattatacaattg 678  Q
    |||||| ||| |||||| |||||||| |||||||||||||||||| |||||    
T  26980125 taaaaaatatggtcaaaataagttatgtgaataatgcatattataaaattg 26980075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 554 - 633
Target Start/End: Complemental strand, 8656225 - 8656149
Alignment:
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||||||| |||||  |  |||||||| |||||||||   ||||| |||||||| |||||||||||||| ||||||    
T  8656225 tgatattttaaaaatattttttgagacaaattaaacaacat---acatgataacatttgtatttatatattagataaaaa 8656149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 28061525 - 28061598
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| |||||||| |||||||    
T  28061525 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatatttaatt 28061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 38851857 - 38851930
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| ||||  ||| ||| |||| || || |||||| ||||||||||||||||    
T  38851857 gtttcaaaatacatgtccaagtcaaccactttacatatgccaatgcataattttgactgttaatatctttaatt 38851930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 649
Target Start/End: Complemental strand, 42662284 - 42662243
Alignment:
Q  608 atttttatttatatattagttaaaaattatagtcaaagtaag 649  Q
    |||| ||||||||||||||||||||| ||| |||||||||||    
T  42662284 atttgtatttatatattagttaaaaagtatggtcaaagtaag 42662243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 1e-34; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 443 - 656
Target Start/End: Original strand, 22575586 - 22575799
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnn 542  Q
    |||||||||| ||||||||||||||||| ||||||| ||  ||||| ||| |||||||||| ||||||| ||||||||||||| ||||||||||          
T  22575586 atactccattcgtttcaaaatacatgtcgcagtcaaccatcacacatatgccaatacacaattttgaccattaatatctttaagtatatataataaaaaa 22575685  T
Q  543 nnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtca 642  Q
             ||||||||||| || ||| ||||| | | |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||  | |    
T  22575686 ttataaaaatttgatattttgaaaatagtcatcgaaagaaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatatgatga 22575785  T
Q  643 aagtaagttatatg 656  Q
    ||||||| ||||||    
T  22575786 aagtaaggtatatg 22575799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 464 - 665
Target Start/End: Original strand, 40800407 - 40800608
Alignment:
Q  464 acatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgatatttta 563  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||| | |  ||||||| |||||| || |||||               ||||||||||||    
T  40800407 acatgtcgcagtcaatcgctacacacatgtcaatacacaactttaatcaataatatcattaattttaaataataaaaaattataaaaatttgatatttta 40800506  T
Q  564 aacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagtt-aaaaattatagtcaaagtaagttatatgaataat 662  Q
    || ||||||||| |||||||||||||||||| |||||||||||||||| || ||||||||||||| ||||| ||| ||||||||||||||| ||| ||||    
T  40800507 aaaatattcatcgagacaaatcaaacaacatcttacatgctaacatttgta-ttatatattagttaaaaaaatatggtcaaagtaagttatgtgattaat 40800605  T
Q  663 gca 665  Q
    |||    
T  40800606 gca 40800608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 459 - 660
Target Start/End: Original strand, 15382440 - 15382642
Alignment:
Q  459 aaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgata 558  Q
    |||||||||||| |||||||||| | |||||||| |||||||||||||||||  ||||||||||||||||||||||||               ||| |||    
T  15382440 aaaatacatgtcgcagtcaatcattgcacacatgtcaatacacaactttgacaattaatatctttaattatatataataaaaaaaattaaaattttaata 15382539  T
Q  559 tttt-aaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatga 657  Q
    |||| ||| ||||||||| | |||||||||||||||| |||||| |||| |||| ||||||||||||| |||||||   | |||| |||||||||| |||    
T  15382540 ttttaaaaaatattcatcgaaacaaatcaaacaacatcttacatactaatatttgtatttatatattatttaaaaaaattggtcagagtaagttatgtga 15382639  T
Q  658 ata 660  Q
    |||    
T  15382640 ata 15382642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 443 - 646
Target Start/End: Original strand, 40977487 - 40977690
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnn 542  Q
    |||||||||  |||||||||||||||||  |||||| |||| |||||||| |||| ||||| |||||| |||||||||||||||||| || | |          
T  40977487 atactccatccgtttcaaaatacatgtccaagtcaaccacttcacacatgccaatgcacaattttgactgttaatatctttaattatctaaagtaaaaaa 40977586  T
Q  543 nnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtca 642  Q
             ||| ||||||| || |||||  ||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||    
T  40977587 ttttaaaaatttaatattttcaaaatatttgtcaagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtca 40977686  T
Q  643 aagt 646  Q
    ||||    
T  40977687 aagt 40977690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 454 - 650
Target Start/End: Complemental strand, 30003786 - 30003589
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatc-tttaattatatataatgnnnnnnnnnnnnnnt 552  Q
    |||||||||||||||||| ||||||||||| |||| ||| ||||  |||| |||||||||||||||| ||||||||| || | |               |    
T  30003786 gtttcaaaatacatgtcaaagtcaatcacttcacatatgtcaatgtacaattttgaccgttaatatcctttaattatctaaagtaaaaaattataaaaat 30003687  T
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    || ||||||| || |||||  ||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  30003686 ttaatattttgaaaatatttgtcaagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 30003589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 556 - 669
Target Start/End: Original strand, 3485319 - 3485432
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || ||||| ||| |||||||||||||||||  ||||||| |||||||| ||||||||||||||||||||| |||  ||||||||||||||      
T  3485319 atattttgaaaatattaatcgagacaaatcaaacaacaccttacatgataacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgc 3485418  T
Q  656 gaataatgcatatt 669  Q
    ||||| ||||||||    
T  3485419 gaatagtgcatatt 3485432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 455 - 633
Target Start/End: Original strand, 42735176 - 42735354
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnnttt 554  Q
    ||||||||||||||||  |||||||||||||||||||| ||||  |||| ||||||||||||||||||||||||| || | |               |||    
T  42735176 tttcaaaatacatgtccaagtcaatcactacacacatgccaatgtacaattttgaccgttaatatctttaattatttaaagtaaacaattataaaaattt 42735275  T
Q  555 gatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
     ||||||| || |||||  || |||||||||||||| ||| ||||||||||| |||| |||||||||||||||||||||    
T  42735276 aatattttgaaaatatttgtcgagacaaatcaaacatcatcttacatgctaatatttgtatttatatattagttaaaaa 42735354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 574 - 665
Target Start/End: Original strand, 16120570 - 16120661
Alignment:
Q  574 tcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| |  |||||||||||    
T  16120570 tcaagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgca 16120661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 559 - 661
Target Start/End: Complemental strand, 9881423 - 9881321
Alignment:
Q  559 ttttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaa 658  Q
    ||||||| ||||| ||| ||||||||| |||||||| ||||||| |||||||| ||| ||||||||||||||||||||| || ||| |||||||| ||||    
T  9881423 ttttaaaaatatttatctagacaaatcgaacaacatcttacatgataacatttatatgtatatattagttaaaaattatggttaaaataagttatgtgaa 9881324  T
Q  659 taa 661  Q
    |||    
T  9881323 taa 9881321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 11641179 - 11641273
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  11641179 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 11641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 17306104 - 17306010
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||    
T  17306104 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattaattaaaaagtatagtcaaagtaagt 17306010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 36757598 - 36757692
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  36757598 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 36757692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 6402522 - 6402616
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| |||||| |||||    
T  6402522 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagt 6402616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 443 - 529
Target Start/End: Complemental strand, 25171416 - 25171330
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||  |||||||||||||||||| |||||| | || |||| ||| |||||||||| |||||||||||||||||||||||||    
T  25171416 atactccatccgtttcaaaatacatgtcaaagtcaaccccttcacatatgccaatacacaattttgaccgttaatatctttaattat 25171330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 454 - 536
Target Start/End: Complemental strand, 27984805 - 27984723
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    ||||||||||||||||| ||| |||||||| |||||||| ||||||||||||| || | ||||||| ||||||||||||||||    
T  27984805 gtttcaaaatacatgtcgcagccaatcactgcacacatgtcaatacacaacttcgatcattaatatttttaattatatataat 27984723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 30701868 - 30701774
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||| ||||| |||| |||||||| |||||||||||||||| ||||||||||||    
T  30701868 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagt 30701774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 36399248 - 36399154
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||| ||||| |||| |||||||| |||||||||||||||| ||||||||||||    
T  36399248 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagt 36399154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 42788654 - 42788748
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| |||||  || |||||||||||||||||| |||||||| || |||| |||||||| |||||||||||| ||| ||||||||||||    
T  42788654 atattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgcaaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 42788748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 52024176 - 52024082
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||| ||||| |||| |||||||| |||||||||||||||| ||||||||||||    
T  52024176 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacacgctaatatttatatttatacattagttaaaaattatggtcaaagtaagt 52024082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 443 - 650
Target Start/End: Original strand, 9342644 - 9342851
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnn 542  Q
    |||||||||  ||||||||||| ||||   |||||| |||| |||| ||| |||| ||||| ||||||||||||||||||||||||| || | |          
T  9342644 atactccatccgtttcaaaatatatgttcaagtcaaccacttcacatatgccaatgcacaattttgaccgttaatatctttaattatctaaactaaaaaa 9342743  T
Q  543 nnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtca 642  Q
             ||| ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| |||  |||    
T  9342744 ttataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatca 9342843  T
Q  643 aagtaagt 650  Q
    ||||||||    
T  9342844 aagtaagt 9342851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 556 - 648
Target Start/End: Original strand, 40771884 - 40771976
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaa 648  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||    
T  40771884 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaa 40771976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 567 - 654
Target Start/End: Original strand, 7568609 - 7568696
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttata 654  Q
    ||||| ||||| |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||| || ||| ||||||| |||||    
T  7568609 atatttatcaaaacaaatcaaacaacatcttacacactaacatttatatttatatattagttaaaaagtagagttaaagtaaattata 7568696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 454 - 648
Target Start/End: Complemental strand, 27292892 - 27292698
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||| |||||| |||| |||| |||  ||| || || ||||||||||||||| ||||||||| || | |               ||    
T  27292892 gtttcaaaatacatgtcaaagtcaaccacttcacatatgctaatgcataattttgaccgttaatatatttaattatctaaagtaaaaaattataaaaatt 27292793  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaa 648  Q
    | ||||||| || |||||  || |||||||||||| ||||| ||||||||||| |||| ||||||||  ||||||||||| ||||||||||||||    
T  27292792 taatattttgaaaatatttgtcgagacaaatcaaataacatcttacatgctaatatttgtatttatactttagttaaaaagtatagtcaaagtaa 27292698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 590 - 678
Target Start/End: Original strand, 30385291 - 30385379
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaattg 678  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||| ||| ||||||||||  ||| |||||| |||| |||||| |||||    
T  30385291 aacatcttacatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaatagtgcacattataaaattg 30385379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 454 - 672
Target Start/End: Original strand, 38153287 - 38153505
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||| ||| || |||||||||| | |||| |||  ||| ||||||||||||||||||||||||||||||| || | |               ||    
T  38153287 gtttcaaaatgcatatcgcagtcaatcagttcacatatgtaaatgcacaactttgaccgttaatatctttaattatctaaagtaaaaaattataaaaatt 38153386  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | |||||||| | ||||| ||| | ||||||| || ||||| ||||||| |||||||| ||||||||| ||||||||||| ||| || | ||||||| ||    
T  38153387 taatattttataaatatttatcgaaacaaatcgaagaacatcttacatgataacatttgtatttatatgttagttaaaaagtatggtaacagtaagtcat 38153486  T
Q  654 atgaataatgcatattata 672  Q
     |||||| |||| ||||||    
T  38153487 gtgaatagtgcacattata 38153505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 556 - 648
Target Start/End: Complemental strand, 24321411 - 24321317
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattata--gtcaaagtaa 648  Q
    ||||||| || |||||  || ||||||||||||||| || ||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||    
T  24321411 atattttgaaaatatttgtcgagacaaatcaaacaatatcttacatgctaatatttgtatttatacattagttaaaaattatatggtcaaagtaa 24321317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 443 - 594
Target Start/End: Complemental strand, 31049867 - 31049719
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnn 542  Q
    |||| |||| |||| |||||||||||||||| ||||   | ||||| ||| ||||||| || ||||||| ||||||||||||||||||||||||          
T  31049867 ataccccatctgttccaaaatacatgtcacaatcaa---cgacacagatgccaatacataattttgaccattaatatctttaattatatataataaaaaa 31049771  T
Q  543 nnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacat 594  Q
             |||||||||||||| ||||||||| ||||||||||||||||||    
T  31049770 ttataaaaatttgatattttaaaaatattcatcgagacaaatcaaacaacat 31049719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 552 - 623
Target Start/End: Complemental strand, 44452188 - 44452117
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatat 623  Q
    ||||||||||| || ||| ||||  ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  44452188 tttgatattttgaaaatactcatggagacaaatcaaacaatattttacatgctaacatttgtatttatatat 44452117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 24749 - 24691
Alignment:
Q  139 ctgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||    
T  24749 ctgatgactaaatttgtcatatgcaccaaacaattttcaagttataaagtagtaagtaa 24691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 26910226 - 26910132
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| |||||  ||||||||||| ||||| ||| || |||| ||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  26910226 atattttaaaaatatttgtcaagacaaattaaacatcatcttgcatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 26910132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 454 - 650
Target Start/End: Original strand, 42367306 - 42367502
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||| ||  ||||||||||| |||| |||  ||| ||||| ||||||||||||||||||||||||| || | |               ||    
T  42367306 gtttcaaaatacatatccaagtcaatcacttcacatatgctaatgcacaattttgaccgttaatatctttaattatctaaagtaaaaaattataaaaatt 42367405  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | ||||||| || |||||  || |||||||||||| ||||| ||||||| ||  |||| |||||||| ||||||||||||||||  |||||||||||    
T  42367406 taatattttgaaaatatttgtcgagacaaatcaaataacatcttacatgttagtatttgtatttatacattagttaaaaattatgatcaaagtaagt 42367502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 36976400 - 36976457
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||    
T  36976400 tgatgactaaatttggcaagtgcatcaaacctttttcaagtaataaagtagtaagtaa 36976457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 590 - 650
Target Start/End: Complemental strand, 6766488 - 6766428
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  6766488 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 6766428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 453 - 525
Target Start/End: Original strand, 15774126 - 15774198
Alignment:
Q  453 tgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaa 525  Q
    ||||| |||||||||||| |||||||||||| |||||||| |||||||||||| ||  |||| ||||||||||    
T  15774126 tgttttaaaatacatgtcgcagtcaatcacttcacacatgtcaatacacaactatggtcgttgatatctttaa 15774198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 577 - 705
Target Start/End: Complemental strand, 31445052 - 31444929
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaat 676  Q
    |||||||| ||||||||| |||||||| ||||||| | ||||||||||||||||||| ||| ||||| ||| | |||   ||||||||| | | || ||     
T  31445052 agacaaattaaacaacatcttacatgcaaacatttgtgtttatatattagttaaaaaatatggtcaaggtacgctatgcaaataatgcacagtgtaaaa- 31444954  T
Q  677 tgatttgtgacatgtattttaaaacggtt 705  Q
        |||||||||||||||||||||||||    
T  31444953 ----ttgtgacatgtattttaaaacggtt 31444929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 556 - 658
Target Start/End: Original strand, 2246663 - 2246766
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagtt-aaaaattatagtcaaagtaagttata 654  Q
    |||||||||| ||||| |||||||| |||| |||||||| ||||||| ||  |||| ||||||||||| | || ||||| || ||||||| |||||||||    
T  2246663 atattttaaaaatatttatcaagactaatcgaacaacatcttacatggtagaatttgtatttatatataaattaaaaaaatagagtcaaaataagttata 2246762  T
Q  655 tgaa 658  Q
    ||||    
T  2246763 tgaa 2246766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 454 - 529
Target Start/End: Original strand, 40771782 - 40771857
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| | ||| |||||||||||||||||||||||||    
T  40771782 gtttcaaaatacatgtccaagtcaaccacttcacatatggcaatgctcaattttgaccgttaatatctttaattat 40771857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 662
Target Start/End: Original strand, 44647856 - 44647931
Alignment:
Q  587 aacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataat 662  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||| |||  ||||| ||||| || ||||||||    
T  44647856 aacaacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataat 44647931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 557 - 668
Target Start/End: Complemental strand, 324064 - 323951
Alignment:
Q  557 tattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaa--aaattatagtcaaagtaagttata 654  Q
    ||||||||| ||||| ||| | ||||||| ||| ||| |||||||||||| |||| ||||||||||| ||||||  |||| ||  ||||| ||| |||||    
T  324064 tattttaaaaatatttatcgaaacaaatcgaactacaatttacatgctaatatttgtatttatatataagttaaacaaatcattatcaaaataaattata 323965  T
Q  655 tgaataatgcatat 668  Q
    ||||||||| ||||    
T  323964 tgaataatgtatat 323951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 577 - 665
Target Start/End: Complemental strand, 16689950 - 16689865
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    |||||||||||||||||| |||||||| ||   || ||||||||||||||||| ||| |||  |||||||||||||| |||||| ||||    
T  16689950 agacaaatcaaacaacatattacatgcgaa---ttgtatttatatattagttagaaaatatgatcaaagtaagttatgtgaatagtgca 16689865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 587 - 665
Target Start/End: Original strand, 28030824 - 28030902
Alignment:
Q  587 aacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||| || |||||||||||||||| ||||||||| ||||||||||| ||| |||||| ||||| || | |||||||||    
T  28030824 aacaatatcttacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaaataagtcatgtaaataatgca 28030902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 495 - 536
Target Start/End: Original strand, 3485259 - 3485300
Alignment:
Q  495 aatacacaactttgaccgttaatatctttaattatatataat 536  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  3485259 aatacacaactttgaccattaatatctttaattatatataat 3485300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 15724355 - 15724298
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||||||||||||| ||| |||| |||||  ||||||||||||||||||||||||||    
T  15724355 tgatgactaaatttgacaagtgcatcaaactattttcaagtaataaagtagtaagtaa 15724298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 703
Target Start/End: Complemental strand, 27984705 - 27984564
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtta 652  Q
    |||||||||| |  ||||||||| | |||||||||||| |   ||||| |||||||||| ||||  ||||||||||||||| ||| |||||||||||  |    
T  27984705 ttgatattttgataatattcatcgaaacaaatcaaacatc---ttacaagctaacatttgtattcgtatattagttaaaaa-tatggtcaaagtaagcaa 27984610  T
Q  653 tatgaataatgcatattatacaattgatttgtgacatgtattttaaaacgg 703  Q
    | |||||| ||||| || || ||     |||||||||||||||||||||||    
T  27984609 tgtgaatagtgcatgttgtaaaa-----ttgtgacatgtattttaaaacgg 27984564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 567 - 650
Target Start/End: Original strand, 15912459 - 15912542
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||| ||| |||||||||||||||||| ||||||||||| |||| |||||| | || | | ||||| ||| ||||||||||||    
T  15912459 atatttatcgagacaaatcaaacaacatcttacatgctaatatttgtatttaaaaataaataaaaaagtatggtcaaagtaagt 15912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 454 - 529
Target Start/End: Original strand, 16120449 - 16120524
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||   |||||| |||| |||| ||| |||| |||||||||| | ||||||||||||||||||    
T  16120449 gtttcaaaatacatgttcaagtcaaccacttcacatatgccaatgcacaactttgcctgttaatatctttaattat 16120524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 36399350 - 36399275
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||||  ||||||  ||| |||| ||| |||| ||||| ||||| |||||||||||||||||||    
T  36399350 gtttcaaaatacatgtccaagtcaacaacttcacatatgccaatgcacaattttgatcgttaatatctttaattat 36399275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 599 - 662
Target Start/End: Original strand, 44644510 - 44644573
Alignment:
Q  599 catgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataat 662  Q
    ||||||||||||| |||||||||||| |||||||| |||  ||||||||||| || ||||||||    
T  44644510 catgctaacatttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaataat 44644573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 454 - 525
Target Start/End: Original strand, 44647723 - 44647794
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaa 525  Q
    |||||||||||||  || ||||||| || | || ||||| |||| |||||||||||||||||||||||||||    
T  44647723 gtttcaaaatacacatcgcagtcaaccatttcatacatgtcaatgcacaactttgaccgttaatatctttaa 44647794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 15857947 - 15858017
Alignment:
Q  139 ctgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaagagcatctccac 209  Q
    |||||||||||||||| ||| ||  ||||| |||||||| ||||||||||||||| ||| | |||||||||    
T  15857947 ctgatgactaaatttgacaagtgtgccaaatcgttttcaggtaataaagtagtaactaaaatcatctccac 15858017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 458 - 536
Target Start/End: Complemental strand, 31445163 - 31445085
Alignment:
Q  458 caaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||| ||||||  |||||| |||  |||||||| |  || |||||||||||| ||||||||||||||||||||||||    
T  31445163 caaaatgcatgtcgtagtcaaccaccgcacacatgccgttaaacaactttgaccattaatatctttaattatatataat 31445085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 596 - 658
Target Start/End: Complemental strand, 34635017 - 34634955
Alignment:
Q  596 ttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaa 658  Q
    ||||||| |||||||| ||||||||||||||||||||| |||  ||||| |||||||| ||||    
T  34635017 ttacatgttaacatttgtatttatatattagttaaaaaatattatcaaaataagttatgtgaa 34634955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 581 - 663
Target Start/End: Complemental strand, 48375127 - 48375045
Alignment:
Q  581 aaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatg 663  Q
    |||||||||||  | ||||||||||| |||| |||||||| |||||||||||| |||  ||||| |||||||  |||||||||    
T  48375127 aaatcaaacaatgtcttacatgctaatatttgtatttataaattagttaaaaaatatgatcaaaataagttaagtgaataatg 48375045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 660
Target Start/End: Complemental strand, 5068891 - 5068806
Alignment:
Q  575 caagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    ||||| |||||||||||||| ||||||  || ||||| ||||||||||||| || |||| |||| ||||| ||| |||||| ||||    
T  5068891 caagataaatcaaacaacatcttacattttatcatttatatttatatattaatttaaaaatataatcaaaataaattatataaata 5068806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 6402420 - 6402493
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  6402420 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 6402493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 485 - 526
Target Start/End: Original strand, 6406020 - 6406061
Alignment:
Q  485 cacacatgacaatacacaactttgaccgttaatatctttaat 526  Q
    |||||||| |||||||||||||||| ||||||||||||||||    
T  6406020 cacacatgtcaatacacaactttgatcgttaatatctttaat 6406061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 529
Target Start/End: Complemental strand, 9881526 - 9881453
Alignment:
Q  456 ttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||| | ||||||  |||| ||||||||  | ||||||||||||||| | |||||||||||||||    
T  9881526 ttcaaaatacatgccgcagtcagccactccacacatgttactacacaactttgaccataaatatctttaattat 9881453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 11641077 - 11641150
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  11641077 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 11641150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 662
Target Start/End: Complemental strand, 14777157 - 14777076
Alignment:
Q  581 aaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataat 662  Q
    |||||||||||||| ||||||  ||| |||| ||||||||||  ||||||||| |||  |||||||||  ||||||||||||    
T  14777157 aaatcaaacaacatcttacatattaatatttgtatttatataacagttaaaaaatatgatcaaagtaaactatatgaataat 14777076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 253
Target Start/End: Original strand, 30095802 - 30095915
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaagagcatctccactgaggttgtcgttttaactcggaaactagc 239  Q
    ||||||||||||||| ||| || ||||||| |||||||| ||||||| |  ||||||| | | ||||||| | |  |||| ||| ||||||| |||||||    
T  30095802 tgatgactaaatttgccaagtgaaccaaactgttttcaaataataaattgataagtaacatcgtctccacagggactgtcatttcaactcggcaactagc 30095901  T
Q  240 gttatctattaaaa 253  Q
    ||||  ||||||||    
T  30095902 gttacttattaaaa 30095915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 36757496 - 36757569
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  36757496 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 36757569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 650
Target Start/End: Original strand, 50972771 - 50972840
Alignment:
Q  581 aaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||| ||||| |||||| ||| |||||||| ||||||||||||| ||||||| |||  |||||||||||    
T  50972771 aaatcgaacaatattttatatgttaacatttgtatttatatattatttaaaaagtatgttcaaagtaagt 50972840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 613 - 653
Target Start/End: Original strand, 6406121 - 6406161
Alignment:
Q  613 tatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  6406121 tatttatatattagttaaaaaatatagtcaaactaagttat 6406161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 582 - 662
Target Start/End: Original strand, 15774413 - 15774493
Alignment:
Q  582 aatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataat 662  Q
    |||| ||||||||||||||||||||||||| | |||| |||| ||| ||||  || |||||||| ||| ||| ||||||||    
T  15774413 aatcgaacaacattttacatgctaacatttgtttttacatataagtgaaaagatagagtcaaagaaagatatgtgaataat 15774493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 633
Target Start/End: Complemental strand, 25695513 - 25695473
Alignment:
Q  593 attttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  25695513 atttaacatgctaacatttatatttatatattagttaaaaa 25695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 533
Target Start/End: Complemental strand, 7268765 - 7268718
Alignment:
Q  486 acacatgacaatacacaactttgaccgttaatatctttaattatatat 533  Q
    ||||||| |||| ||||||||||||| ||||||||||| |||||||||    
T  7268765 acacatgtcaatgcacaactttgaccattaatatctttcattatatat 7268718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 627
Target Start/End: Complemental strand, 38737527 - 38737456
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagt 627  Q
    |||| ||||| ||| |||||||||| ||||||||||||| ||||||| |||  ||| | |||||||||||||    
T  38737527 atatattaaaaatactcatcaagacgaatcaaacaacatcttacatgataatgtttatctttatatattagt 38737456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 52024278 - 52024203
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||||  ||||||  ||| |||| ||  |||| ||||| ||||| |||||||||||||||||||    
T  52024278 gtttcaaaatacatgtccaagtcaacaacttcacatataccaatgcacaattttgatcgttaatatctttaattat 52024203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 556 - 598
Target Start/End: Complemental strand, 23435713 - 23435671
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacatttta 598  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||    
T  23435713 atattttaaaaatattaatcaagacaaatccaacaacatttta 23435671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 23569823 - 23569777
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatg 602  Q
    |||||||||| |||||||||||||| |||| |||||||| |||||||    
T  23569823 atattttaaaaatattcatcaagacgaatccaacaacatcttacatg 23569777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 552 - 602
Target Start/End: Complemental strand, 41501760 - 41501710
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatg 602  Q
    |||||||||||||| ||||||||| |||| |||| |||||||| |||||||    
T  41501760 tttgatattttaaaaatattcatcgagacgaatccaacaacatcttacatg 41501710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 455 - 529
Target Start/End: Original strand, 50972643 - 50972717
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||| |||||||| ||| |||||||| | || || || ||||||  ||||||| |||||||||    
T  50972643 tttcaaaatacatgtcgcagtcaattacttcacacatgccgattcaaaattttgactcttaatatttttaattat 50972717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 17306206 - 17306133
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  ||||||  ||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  17306206 gtttcaaaatacatgtccaagtcaactacttcacatatgccaatgcataattttgactgttaatatctttaatt 17306133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 579 - 620
Target Start/End: Complemental strand, 25171281 - 25171240
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttata 620  Q
    |||||||||||||||| ||||||||||| |||| ||||||||    
T  25171281 acaaatcaaacaacatcttacatgctaatatttgtatttata 25171240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 8e-33; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 443 - 633
Target Start/End: Original strand, 12359821 - 12360010
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnn 542  Q
    ||||||||| |||| ||||||| |||||||||||||||||||  ||||||| || | |||||||||||| ||||||||||||||||| ||||||          
T  12359821 atactccatctgttccaaaatatatgtcacagtcaatcactatgcacatgataaaatacaactttgaccattaatatctttaattatgtataat-aaaaa 12359919  T
Q  543 nnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
             ||||||||||| || ||||||||| ||||||||||||||| || || ||||||||||||| |||||||||||||||||||||    
T  12359920 ttataaaaatttgatattttgaaaatattcatcgagacaaatcaaacaatatctttcatgctaacatttgtatttatatattagttaaaaa 12360010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 552 - 670
Target Start/End: Complemental strand, 6996134 - 6996017
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || ||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| |||||| ||| ||||||    
T  6996134 tttgatattttgaaaatattcatcgagacaaatcaaacaatattttacatggtaacatttatatttatatattagttaaaaaatatagttaaa-taagtt 6996036  T
Q  652 atatgaataatgcatatta 670  Q
    || |||||| |||| ||||    
T  6996035 atgtgaatagtgcacatta 6996017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 556 - 660
Target Start/End: Original strand, 3422322 - 3422429
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagtt---aaaaattatagtcaaagtaagtta 652  Q
    |||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||   ||||| ||||||||||||||||||    
T  3422322 atattttaaaaatatttatcaagacaaatcaatcaacatcttacatgctaacatttgtatttatatattagttaaaaaaaaatatagtcaaagtaagtta 3422421  T
Q  653 tatgaata 660  Q
    | ||||||    
T  3422422 tgtgaata 3422429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 552 - 666
Target Start/End: Complemental strand, 18998841 - 18998727
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || ||||||||| | |||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| ||| || |||||||  |    
T  18998841 tttgatattttgaaaatattcatcgaaacaaatcaaacaacatcttacatactaacatttgtatttatatattagttaaaaaatatggttaaagtaaact 18998742  T
Q  652 atatgaataatgcat 666  Q
    || ||||||||||||    
T  18998741 atgtgaataatgcat 18998727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 8086142 - 8086236
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||| |||||  || |||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  8086142 atattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagt 8086236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 14634269 - 14634363
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  14634269 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagt 14634363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 33387370 - 33387276
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  33387370 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagt 33387276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 9502739 - 9502848
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||| | ||    
T  9502739 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaat 9502838  T
Q  656 gaataatgca 665  Q
    ||||| ||||    
T  9502839 gaatagtgca 9502848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 978227 - 978133
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  978227 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 978133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 454 - 665
Target Start/End: Original strand, 18094091 - 18094302
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  |||||| || | |||| |||||||| ||||| ||||||||||||||||||||||||| || | |               ||    
T  18094091 gtttcaaaatacatgtccaagtcaaccatttcacatatgacaatgcacaattttgaccgttaatatctttaattatctaaactaaaaaattataaaaatt 18094190  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | ||||||| || ||| |  || ||||||| |||||||||| ||||||||||| |||| |||||||| |||||||||||| |||| | |||||||||||     
T  18094191 ttatattttgaaaatacttgtcgagacaaaccaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtataattaaagtaagttaa 18094290  T
Q  654 atgaataatgca 665  Q
     |||||||||||    
T  18094291 gtgaataatgca 18094302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 552 - 665
Target Start/End: Original strand, 24992246 - 24992359
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||| |||||| || ||||||||  |||||||||||||||||| ||| ||||||| |||| |||||||| |||||||||||| ||| ||||||||||| |    
T  24992246 tttggtattttgaaaatattcattgagacaaatcaaacaacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagct 24992345  T
Q  652 atatgaataatgca 665  Q
    || |||||| ||||    
T  24992346 atgtgaatagtgca 24992359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 454 - 665
Target Start/End: Original strand, 33587479 - 33587690
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||| ||||||||||||  ||||||||||| |||||||| |||| ||||| ||| || |||||||||||||||||| || | |               ||    
T  33587479 gttttaaaatacatgtctaagtcaatcacttcacacatgccaatgcacaatttttactgttaatatctttaattatctaaagtaaaaaattataaaaatt 33587578  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | ||||||| || |||||  |  |||||||||||||||||| ||||||| ||| |||| |||||||| |||||||||||| ||| |||||||||||| |     
T  33587579 taatattttgaaaatatttgttgagacaaatcaaacaacatcttacatgttaatatttgtatttatagattagttaaaaaatatggtcaaagtaagtcaa 33587678  T
Q  654 atgaataatgca 665  Q
    ||||||||||||    
T  33587679 atgaataatgca 33587690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 668
Target Start/End: Original strand, 5947666 - 5947775
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| ||||| ||||||||||||||||||   ||||| ||||| | |||| ||||||||| |||| |||||| ||| ||||||||||||||| |    
T  5947666 atattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgt 5947762  T
Q  656 gaataatgcatat 668  Q
    |||||||| ||||    
T  5947763 gaataatgtatat 5947775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 454 - 650
Target Start/End: Complemental strand, 7224417 - 7224221
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    ||||||||| |||||||   |||||||||| |||| ||| |||| ||||| ||| ||||||||||||||||||||| || | |               ||    
T  7224417 gtttcaaaacacatgtccaggtcaatcacttcacatatgccaatgcacaatttttaccgttaatatctttaattatctaaagtataaaaatataaaaatt 7224318  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | ||||||| || |||||  || |||||||||||||||||||||||||||||| |||| |||||||| |||||||| ||| ||| ||||||||||||    
T  7224317 taatattttgaaaatatttgtcgagacaaatcaaacaacattttacatgctaatatttgtatttataaattagttagaaagtatggtcaaagtaagt 7224221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 678
Target Start/End: Original strand, 12456752 - 12456874
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || ||||  |||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||||| |||  | |||||||||||| |    
T  12456752 atattttgaaaatatgtatcaagacaaatcaaacaacatcttacatactaacatttgtatttgtatattagttaaaaaatatgattaaagtaagttatgt 12456851  T
Q  656 gaataatgcatattatacaattg 678  Q
     |||| |||| ||| || |||||    
T  12456852 aaatagtgcacattgtaaaattg 12456874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 589 - 678
Target Start/End: Complemental strand, 32017330 - 32017241
Alignment:
Q  589 caacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaattg 678  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| |||  |||||||||||||| |||||| |||| || ||| |||||    
T  32017330 caacatcttacatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgtgaatattgcacatcataaaattg 32017241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 443 - 669
Target Start/End: Complemental strand, 27109951 - 27109726
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnn 542  Q
    |||||||||  |||| |||||||||||   |||||| |||| |||| ||| |||| ||||| ||||||||||||||||||||||||| || | |          
T  27109951 atactccatccgttttaaaatacatgttcaagtcaaccacttcacatatgtcaatgcacaattttgaccgttaatatctttaattatctaaagtaaaaaa 27109852  T
Q  543 nnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtca 642  Q
             ||| ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||| || |||| ||||||| |||| |||    
T  27109851 ttacaaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttttacattaattaaaaagtata-tca 27109753  T
Q  643 aagtaagttatatgaataatgcatatt 669  Q
    |||||||| | ||||||||| ||||||    
T  27109752 aagtaagtcaaatgaataatacatatt 27109726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 494 - 647
Target Start/End: Complemental strand, 11761277 - 11761125
Alignment:
Q  494 caatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaaca 593  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||               ||||||| |||||| ||||| ||  |||||||||||||||||    
T  11761277 caataaacaactttgaccattaatatttttaattatatataataaaaaattataaaattttgata-tttaaaaatattgattgagacaaatcaaacaaca 11761179  T
Q  594 ttttacatgctaacatttttatttatatattagttaaaaattatagtcaaagta 647  Q
    | ||||||| ||| |||| ||||||||||||||||||||| ||| |||||||||    
T  11761178 tcttacatgttaatatttgtatttatatattagttaaaaaatatggtcaaagta 11761125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 552 - 660
Target Start/End: Original strand, 24916354 - 24916464
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagtt--aaaaattatagtcaaagtaag 649  Q
    ||||||||||| || ||||||||  |||||||||||||||||| ||| ||||||| |||| |||||||| |||||||  ||||| ||| |||||||||||    
T  24916354 tttgatattttgaaaatattcattgagacaaatcaaacaacatcttatatgctaatatttgtatttataaattagttaaaaaaaatatggtcaaagtaag 24916453  T
Q  650 ttatatgaata 660  Q
     ||| ||||||    
T  24916454 ctatgtgaata 24916464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 444 - 650
Target Start/End: Complemental strand, 40156462 - 40156254
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactaca--cacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnn 541  Q
    |||||||| ||||||||||||||||||  |||||| ||||  |  || ||| |||| ||||| ||||||||||||||||||||||||| || | |         
T  40156462 tactccatctgtttcaaaatacatgtccaagtcaaccacttaattcatatgtcaatgcacaattttgaccgttaatatctttaattatctaaagtaaaaa 40156363  T
Q  542 nnnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtc 641  Q
              ||| ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||| ||||||||||| ||     
T  40156362 attataaaaatttaatatttttaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattaattaaaaattatggta 40156263  T
Q  642 aaagtaagt 650  Q
    |||||||||    
T  40156262 aaagtaagt 40156254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 577 - 650
Target Start/End: Original strand, 27579563 - 27579636
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||||||||  | || |||||||||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  27579563 agacaaatcaaattatatcttacatgctaacatttgtatttatatattagttaaaaaatatagttaaagtaagt 27579636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 578 - 650
Target Start/End: Original strand, 3472411 - 3472483
Alignment:
Q  578 gacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||||||||||||| ||||||||||| |||| |||||||  |||||||||||| ||| ||||||||||||    
T  3472411 gacaaatcaaacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatggtcaaagtaagt 3472483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 567 - 669
Target Start/End: Original strand, 2825244 - 2825347
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaa-attatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||  ||| ||||| |||||||| ||| |||||||||||| ||||||||||||| | |||| | |||  |||||||||||||| |||||||||||    
T  2825244 atattcattgagataaatcgaacaacatcttatatgctaacatttctatttatatattaatgaaaataatattatcaaagtaagttatgtgaataatgca 2825343  T
Q  666 tatt 669  Q
    ||||    
T  2825344 tatt 2825347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 12007767 - 12007838
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||  |||||| |||||    
T  12007767 acaaatcaaacaacattttacatgctagcatttgtatttatatattaattaaaaagtagggtcaaattaagt 12007838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 581 - 652
Target Start/End: Original strand, 31197827 - 31197898
Alignment:
Q  581 aaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtta 652  Q
    ||||| |||| ||||||||||  |||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  31197827 aaatcgaacagcattttacatattaacatttgtatttatattttagttaaaaattattgtcaaagtaagtta 31197898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 445 - 536
Target Start/End: Original strand, 36239917 - 36240008
Alignment:
Q  445 actccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||||||||||| ||||||||||  || |||||||| ||||||||  ||||||| ||||||||| |||||||| |||| |||| ||||||    
T  36239917 actccatttgtttctaaatacatgttgcaatcaatcacgacacacatatcaatacataactttgacggttaatatttttatttatctataat 36240008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 625
Target Start/End: Original strand, 7749845 - 7749918
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatatta 625  Q
    |||||||| ||||| ||||||||  |||||||| |||||| || |||||||||||||||| |||||||||||||    
T  7749845 tttgatatcttaaagatattcattgagacaaattaaacaatatcttacatgctaacatttctatttatatatta 7749918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 633
Target Start/End: Original strand, 9050688 - 9050765
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  9050688 atattttgaaaatatttttcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaa 9050765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 649
Target Start/End: Original strand, 26386988 - 26387084
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaag 649  Q
    |||||||||||||| |||||| |  | |||| ||||||||||| ||| |||||||||||| ||||||||| ||||||||||| |||  ||||||||||    
T  26386988 tttgatattttaaaaatattcgttgaaacaa-tcaaacaacatcttaaatgctaacatttatatttatatgttagttaaaaaatatgatcaaagtaag 26387084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 669
Target Start/End: Original strand, 30354986 - 30355099
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||  ||| || ||||||| | |  |    
T  30354986 atattttgaaaatatttgtcgagacaaattaaacaacatcttacatgctaatatttgtatttatatattagttaaaatgtatggttaaagtaaatcaagt 30355085  T
Q  656 gaataatgcatatt 669  Q
    ||||| ||||||||    
T  30355086 gaatagtgcatatt 30355099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 577 - 633
Target Start/End: Complemental strand, 32400456 - 32400400
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  32400456 agacaaattaaacaacatcttacatgctaatatttgtatttatatattagttaaaaa 32400400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 579 - 667
Target Start/End: Original strand, 38916385 - 38916473
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcata 667  Q
    ||||||| || ||||| | |||||||||||||| ||||||||| ||||||||||| ||| ||||||| |||| || |||||| ||||||    
T  38916385 acaaatcgaataacatctcacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaagcaagtcatgtgaatagtgcata 38916473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 605 - 672
Target Start/End: Complemental strand, 35825063 - 35824996
Alignment:
Q  605 aacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattata 672  Q
    ||||||| |||||||||||| |||||||||||| |||||| ||| ||||||||||| | |||||||||    
T  35825063 aacatttgtatttatatattggttaaaaattatggtcaaaataaattatatgaatagttcatattata 35824996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 454 - 529
Target Start/End: Original strand, 38916263 - 38916338
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||| ||||| || |||| |||| |||||||| |||| |||||| |||||||||||||| |||||||||    
T  38916263 gtttcaaaatatatgtcgcaatcaaccacttcacacatgccaatgcacaaccttgaccgttaatatatttaattat 38916338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 451 - 529
Target Start/End: Complemental strand, 18598787 - 18598709
Alignment:
Q  451 tttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||| |||||| ||||| || |||| |||| |||||||| ||||  ||||||||||||||||||||||| ||||||    
T  18598787 tttgttttaaaatagatgtcgcaatcaaccacttcacacatgtcaatgtacaactttgaccgttaatatcttaaattat 18598709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 590 - 660
Target Start/End: Complemental strand, 39776746 - 39776676
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||| ||  |||||| |||||||| ||||||    
T  39776746 aacattttacatgctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaata 39776676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 668
Target Start/End: Complemental strand, 17354340 - 17354229
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| ||||| |||||| | |||||||||| ||| ||||| ||||||||  |||| |||||||  || ||||| |||   |||||||||||||     
T  17354340 atattttaaaaatatttatcaagtcgaatcaaacaatattatacattctaacattaatattcatatatttatttaaaat-ataacaaaagtaagttatac 17354242  T
Q  656 gaataatgcatat 668  Q
    |||||||||||||    
T  17354241 gaataatgcatat 17354229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 632
Target Start/End: Complemental strand, 43196376 - 43196296
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaa 632  Q
    ||||||||||| || ||||||||  | |||||||||||| ||| ||||||  ||||||||  |||||||||||||||||||    
T  43196376 tttgatattttcaaaatattcattgaaacaaatcaaacatcatcttacatattaacatttgcatttatatattagttaaaa 43196296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 552 - 599
Target Start/End: Original strand, 898409 - 898456
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttac 599  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  898409 tttgatattttaaaaatatttatcaagacaaatcaaacaacatcttac 898456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 600 - 671
Target Start/End: Complemental strand, 4671315 - 4671244
Alignment:
Q  600 atgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattat 671  Q
    |||||| ||||| ||||||||||| ||||||||| |||   ||||||||||||| |||||||| ||||||||    
T  4671315 atgctatcatttgtatttatatatcagttaaaaaatatgaacaaagtaagttatgtgaataatacatattat 4671244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 458 - 529
Target Start/End: Complemental strand, 11251362 - 11251291
Alignment:
Q  458 caaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||  |||||| |||| |||| ||| |||| ||||| ||||||||| |||||||||||||||    
T  11251362 caaaatacatgtccaagtcaaccacttcacatatgccaatgcacaattttgaccgtcaatatctttaattat 11251291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 455 - 530
Target Start/End: Original strand, 12446878 - 12446953
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattata 530  Q
    |||||||||| |||||  ||||||||||| |||| ||| |||| ||||| ||||||| |||| |||||||||||||    
T  12446878 tttcaaaatatatgtccaagtcaatcacttcacatatgtcaatgcacaattttgaccattaacatctttaattata 12446953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 35641918 - 35641827
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagta 647  Q
    |||||||||| ||||| ||| ||||||||| |||||||||||| ||| ||  |||| | |||||||||||||  |||| ||| |||||||||    
T  35641918 atattttaaaaatatttatcgagacaaatccaacaacattttatatgatattatttatctttatatattagtagaaaaatatggtcaaagta 35641827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 11251264 - 11251170
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || ||| |||||||| |||||  |||||||||| |||| |||||||| |||||||||||| ||| |||||| |||||    
T  11251264 atattttgaaaatatttgtcgagataaatcaaataacatcgtacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagt 11251170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 577 - 650
Target Start/End: Original strand, 11785858 - 11785932
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttt-tatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| |||||||||| ||||||| ||| ||||| |||||||| |||||||||||| |||  |||||||||||    
T  11785858 agacaaaccaaacaacatcttacatggtaatattttgtatttatacattagttaaaaagtatgatcaaagtaagt 11785932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 577 - 650
Target Start/End: Original strand, 12447551 - 12447622
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||||||||||| ||||||||||  || | |||||| | |||||||||||| ||| ||||||||||||    
T  12447551 agacaaatcaaacaacatcttacatgcta--atatgtatttaaacattagttaaaaagtatggtcaaagtaagt 12447622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 466 - 536
Target Start/End: Original strand, 26386903 - 26386973
Alignment:
Q  466 atgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    ||||| ||||||| |||| || ||||| |||||||||||||| ||  |||| |||||||||||||||||||    
T  26386903 atgtcgcagtcaaccactgcatacatgtcaatacacaactttaactattaacatctttaattatatataat 26386973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 30779895 - 30779849
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatg 602  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||    
T  30779895 atattttaaaaatattcatcaagacaaatccaacaacatcttacatg 30779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 35371787 - 35371705
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaagagcatctccactgaggttgtcgtt 222  Q
    ||||||||||||||| ||| || |||||||| ||| ||||||||||||| |||||||| | | ||||||| | | ||||||||    
T  35371787 tgatgactaaatttggcaactgaaccaaaccatttccaagtaataaagttgtaagtaaaatcgtctccacggggattgtcgtt 35371705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 978329 - 978256
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  978329 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 978256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 9502637 - 9502710
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  9502637 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 9502710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 14634167 - 14634240
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  14634167 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 14634240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 33387471 - 33387398
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  33387471 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 33387398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 677
Target Start/End: Complemental strand, 37495708 - 37495639
Alignment:
Q  608 atttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaatt 677  Q
    |||| ||||||||||||||||||||| |||  |||||||||| |||  ||||| ||||||||||| ||||    
T  37495708 atttgtatttatatattagttaaaaaatatgatcaaagtaagatatgagaatagtgcatattataaaatt 37495639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 453 - 529
Target Start/End: Original strand, 7002517 - 7002593
Alignment:
Q  453 tgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||||| || |||| |||| || | ||| |||| ||||||||||| |||| |||| |||||||||    
T  7002517 tgtttcaaaatacatgtcgcattcaaccacttcataaatgtcaatgcacaactttgatcgttgatatatttaattat 7002593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 20858171 - 20858123
Alignment:
Q  160 tgcaccaaaccgttttcaagtaataaagtagtaagtaagagcatctcca 208  Q
    ||||| |||| ||||||||||||||||||||||||||| | ||||||||    
T  20858171 tgcactaaactgttttcaagtaataaagtagtaagtaaaatcatctcca 20858123  T

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Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 34112209 - 34112134
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||| |||||||||||   |||||| |||| |||||||| ||||  |||| |||||| ||||||||||||||||||    
T  34112209 gttttaaaatacatgttcaagtcaaccacttcacacatgtcaatgtacaattttgacggttaatatctttaattat 34112134  T

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Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 26267548 - 26267582
Alignment:
Q  163 accaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    |||||||||||||||| ||||||||||||||||||    
T  26267548 accaaaccgttttcaaataataaagtagtaagtaa 26267582  T

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Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 596 - 650
Target Start/End: Complemental strand, 34112072 - 34112018
Alignment:
Q  596 ttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| ||| |||| |||||||| |||||| ||||| ||||||||||||||||    
T  34112072 ttacatgataatatttgtatttatagattagtaaaaaaatatagtcaaagtaagt 34112018  T

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Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 29518496 - 29518553
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||||||||||||| ||| || ||||||  |||| || |||||||||||||||||||    
T  29518496 tgatgactaaatttggcaagtgtaccaaattgtttccatgtaataaagtagtaagtaa 29518553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 32020278 - 32020225
Alignment:
Q  458 caaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgacc 511  Q
    |||||| |||||| ||||||| |||| |||||||| |||||| |||||||||||    
T  32020278 caaaatgcatgtcgcagtcaaccactgcacacatgtcaatacgcaactttgacc 32020225  T

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Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 665
Target Start/End: Original strand, 36240095 - 36240152
Alignment:
Q  608 atttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    |||| |||||||||||||||| |||| ||| ||||||| |||||||| ||||| ||||    
T  36240095 atttgtatttatatattagtttaaaaatatggtcaaagaaagttataagaatagtgca 36240152  T

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Target: chr4 (Bit Score: 71; Significance: 1e-31; HSPs: 106)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 454 - 650
Target Start/End: Complemental strand, 7614867 - 7614671
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||| |||||||||||| ||||||| |||||||||||||  ||||  ||| ||||||  ||||||||||||||||||||||||               ||    
T  7614867 gtttaaaaatacatgtcgcagtcaaccactacacacatgttaatattcaattttgactattaatatctttaattatatataataagaaattataaaaatt 7614768  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||||| || ||||||||| | || ||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| |||||| |||||    
T  7614767 tgatattttgaaaatattcatcgaaacgaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagt 7614671  T

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Target: chr4; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 458 - 665
Target Start/End: Original strand, 20875261 - 20875468
Alignment:
Q  458 caaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntttgat 557  Q
    ||||||||||||  |||| || || | ||||||||  |||| |||||||||||| ||||||||||||||||||||||||               ||||||    
T  20875261 caaaatacatgtagcagttaaccattgcacacatgctaatatacaactttgaccattaatatctttaattatatataataaaaaatagtaaaaatttgat 20875360  T
Q  558 attttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatga 657  Q
    ||||| || ||||||||  |||||||||||||||||| ||| |||| |||||||  |||||||||||||||||||| ||| |||||||||| ||||||||    
T  20875361 attttgaaaatattcatggagacaaatcaaacaacatcttatatgcaaacatttacatttatatattagttaaaaaatatggtcaaagtaaattatatga 20875460  T
Q  658 ataatgca 665  Q
    ||| ||||    
T  20875461 atagtgca 20875468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 454 - 638
Target Start/End: Original strand, 19433368 - 19433552
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| ||||| ||||||||||||||||||||||||| || |||               ||    
T  19433368 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcacaattttgaccgttaatatctttaattatctaaaataaaaaattataaaaatt 19433467  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattata 638  Q
    | ||||||| || ||||||||| |||||||||||||||||| ||||||||||| |||| |||||||| | |||||||||| ||||    
T  19433468 taatattttgaaaatattcatcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacaatagttaaaaagtata 19433552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 552 - 678
Target Start/End: Original strand, 29585953 - 29586078
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||||||||| ||||| ||  ||| |||||||| ||||||||||||| |||||||| |||||| |||||| ||||||| ||| |||||||||||||    
T  29585953 tttgatattttaaaaatatttattgagataaatcaaaaaacattttacatgttaacatttgtatttacatattaattaaaaaatat-gtcaaagtaagtt 29586051  T
Q  652 atatgaataatgcatattatacaattg 678  Q
    || |||||| || |||||||| |||||    
T  29586052 atgtgaatagtgtatattataaaattg 29586078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 552 - 660
Target Start/End: Original strand, 50685304 - 50685414
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaa-caacattttacatgctaacattttt-atttatatattagttaaaaattatagtcaaagtaag 649  Q
    ||||||||||| || |||||||||||| ||||||||| |||||||||||||| |||||||||| | |||||||||||||||||| ||| |||||||||||    
T  50685304 tttgatattttgaaaatattcatcaaggcaaatcaaaacaacattttacatgataacattttttaattatatattagttaaaaaatatggtcaaagtaag 50685403  T
Q  650 ttatatgaata 660  Q
     ||| ||||||    
T  50685404 atatgtgaata 50685414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 556 - 669
Target Start/End: Complemental strand, 12625401 - 12625288
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||| ||| |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| | ||    
T  12625401 atatttaaaaaatatttttcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcagat 12625302  T
Q  656 gaataatgcatatt 669  Q
    ||||| ||||||||    
T  12625301 gaatagtgcatatt 12625288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 556 - 669
Target Start/End: Complemental strand, 26125858 - 26125745
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| |  |    
T  26125858 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagt 26125759  T
Q  656 gaataatgcatatt 669  Q
    ||||||||||||||    
T  26125758 gaataatgcatatt 26125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 552 - 633
Target Start/End: Complemental strand, 10550577 - 10550499
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||||||||| ||||||||| |||||||||||||| |   ||||||||||||||||||||||||||||||||||||||    
T  10550577 tttgatattttaaaaatattcatcgagacaaatcaaacatc---ttacatgctaacatttttatttatatattagttaaaaa 10550499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 454 - 665
Target Start/End: Original strand, 12240187 - 12240399
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    ||||||||||| |||||| |||||| |||| |||| ||| |||||||||| ||||||| ||||||||||||||||| || | |               ||    
T  12240187 gtttcaaaatatatgtcaaagtcaaccacttcacatatgccaatacacaattttgaccattaatatctttaattatctaaagtaaaaaaattataaaatt 12240286  T
Q  554 tga-tattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtta 652  Q
    | | |||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| |    
T  12240287 tcaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtca 12240386  T
Q  653 tatgaataatgca 665  Q
     ||||||| ||||    
T  12240387 aatgaatagtgca 12240399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 29830493 - 29830399
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  29830493 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 29830399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 670
Target Start/End: Complemental strand, 31010364 - 31010250
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||| | |||||  || ||||||||||||||| || ||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||| | ||    
T  31010364 atattttagaaatatttgtcgagacaaatcaaacaatatcttacatgctaatatttttatttatacattagttaaaaagtatggtcaaagtaagtcaaat 31010265  T
Q  656 gaataatgcatatta 670  Q
    ||||| |||| ||||    
T  31010264 gaatagtgcacatta 31010250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 43967873 - 43967779
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  43967873 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 43967779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 44232189 - 44232283
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  44232189 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 44232283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 454 - 665
Target Start/End: Original strand, 17446643 - 17446854
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  ||||||  ||| |||| ||| |||| ||||| |||||||||||||||||||||||||||| | |               ||    
T  17446643 gtttcaaaatacatgtccaagtcaactacttcacatatgtcaatgcacaattttgaccgttaatatctttaattatataaagtaaaaaattataaaaatt 17446742  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    | |||||||||| |||||  || |||||||||||||||||| ||||||| ||| |||| |||||||| |||||||||||  ||| |||||||| ||| |     
T  17446743 taatattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaatgtatggtcaaagttagtcaa 17446842  T
Q  654 atgaataatgca 665  Q
    ||||||| ||||    
T  17446843 atgaatagtgca 17446854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 577 - 670
Target Start/End: Complemental strand, 30446426 - 30446334
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatta 670  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| ||  |||||||||||| || ||||||||||| ||||    
T  30446426 agacaaatcaaacaacattttacaggctaacatttgtatttatatattagtcaaaaa-tagggtcaaagtaagtcatgtgaataatgcagatta 30446334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 556 - 665
Target Start/End: Complemental strand, 55191974 - 55191865
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| |||||  || ||||||||||||||||||||| |||||||| |||| |||||| | |||| ||||||| |||||||||||||||| | ||    
T  55191974 atattttaaaaatatttgtcgagacaaatcaaacaacattttgcatgctaatatttgtatttacacattaattaaaaagtatagtcaaagtaagtcaaat 55191875  T
Q  656 gaataatgca 665  Q
    ||||| ||||    
T  55191874 gaatagtgca 55191865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 2570994 - 2571110
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| |||||  |  ||||||||||||  | || |||||||||||||||| ||||||||||||||||||||| |||||||||| ||| | || |    
T  2570994 atattttaaaaatatttgttgagacaaatcaaattatatcttacatgctaacatttgtatttatatattagttaaaaaatatagtcaaaataaatcatgt 2571093  T
Q  656 gaataatgcatattata 672  Q
    |||||||||| ||||||    
T  2571094 gaataatgcacattata 2571110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 581 - 669
Target Start/End: Original strand, 36523105 - 36523193
Alignment:
Q  581 aaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatt 669  Q
    ||||| |||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| || | |||| ||||||||    
T  36523105 aaatcgaacaacatcttacatgttaacatttgtatttatatattagttaaaaagtatagtcaaagtaagtcatgtaaatagtgcatatt 36523193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 556 - 648
Target Start/End: Original strand, 55209686 - 55209778
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaa 648  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||    
T  55209686 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaa 55209778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 577 - 660
Target Start/End: Complemental strand, 3037109 - 3037026
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    |||||||||||| || |||||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||| || ||||||    
T  3037109 agacaaatcaaataatattttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaata 3037026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 552 - 659
Target Start/End: Original strand, 19903758 - 19903865
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || ||||| ||| | ||||||||||||| || | |||||||||||||| ||||||||||||||||||||  ||| |||||||||| ||    
T  19903758 tttgatattttgaaaatatttatcgaaacaaatcaaacaatatctcacatgctaacatttgtatttatatattagttaaaatatatggtcaaagtaaatt 19903857  T
Q  652 atatgaat 659  Q
    || |||||    
T  19903858 atgtgaat 19903865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 38416785 - 38416856
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  38416785 acaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 38416856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 454 - 536
Target Start/End: Complemental strand, 4455545 - 4455463
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    ||||||||||||||||| ||||||| |||| || |||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  4455545 gtttcaaaatacatgtcgcagtcaaccactgcagacatgctaatacacaactttgaccattaatatctataattatatataat 4455463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 454 - 650
Target Start/End: Original strand, 4467530 - 4467725
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  |||||| |||| || ||||| |||| ||| | ||||||||||||||||||||||||| || | |               ||    
T  4467530 gtttcaaaatacatgtccaagtcaaccacttcaaacatgccaatgcacgattttgaccgttaatatctttaattatctaaagtaaaaaattataaaattt 4467629  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | |||||| ||| |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||||||||||| ||||    
T  4467630 taatatttgaaa-atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatagtcaaagcaagt 4467725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 567 - 653
Target Start/End: Original strand, 14144580 - 14144666
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    ||||||||  |||||||||||||||||| |||||| |||| |||| ||||||||||||||||||||| | | |||||||||||||||    
T  14144580 atattcattgagacaaatcaaacaacatcttacatactaatatttgtatttatatattagttaaaaaatgtggtcaaagtaagttat 14144666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 25296692 - 25296786
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  25296692 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 25296786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 583 - 665
Target Start/End: Original strand, 35381033 - 35381115
Alignment:
Q  583 atcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||| | ||||||| ||||    
T  35381033 atcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgca 35381115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 45291982 - 45291888
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| |||  |||||||||||    
T  45291982 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagt 45291888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 670
Target Start/End: Complemental strand, 50205893 - 50205779
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| |||||  || ||| |||||||||||||| ||||  ||||| |||| ||||||||||||||||||||| ||| |||||||||||| | ||    
T  50205893 atattttaaaaatatttgtcgagataaatcaaacaacatcttacgagctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaat 50205794  T
Q  656 gaataatgcatatta 670  Q
    ||||| |||| ||||    
T  50205793 gaatagtgcacatta 50205779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 54330802 - 54330896
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  54330802 atattttgaaaatatttgtcgagataaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 54330896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 577 - 663
Target Start/End: Original strand, 56297835 - 56297921
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatg 663  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||||||||||| || ||| ||||||  ||||||| |||||||||    
T  56297835 agacaaatcagacaacattttatatgctaacatttgtatttatatattagttaataaatatggtcaaaacaagttatgtgaataatg 56297921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 441 - 652
Target Start/End: Original strand, 9029446 - 9029657
Alignment:
Q  441 acatactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnn 540  Q
    ||||||||| |  |||| |||||||||||   ||||||||||| |||| ||| |||| ||||| ||||| ||||||||||||||||||| || | |        
T  9029446 acatactccctccgttttaaaatacatgtttaagtcaatcacttcacatatgccaatgcacaattttgatcgttaatatctttaattatctaaagtaaaa 9029545  T
Q  541 nnnnnnnnnnntttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagt 640  Q
               ||| |||||||||| |||||  || ||||||||||||||| || |||| |||||| |||| |||||||| |||||||||||| ||| ||    
T  9029546 aattataaaaatttaatattttaaaaatatttgtcgagacaaatcaaacaatatcttacgtgctaatatttgtatttatacattagttaaaaagtatggt 9029645  T
Q  641 caaagtaagtta 652  Q
    ||||||||||||    
T  9029646 caaagtaagtta 9029657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 552 - 669
Target Start/End: Original strand, 19533931 - 19534048
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||||||||| ||||||||| ||||||||| ||||| || ||| |||| |  |||| | ||| |||||||||  |||| ||| ||||||||| |||    
T  19533931 tttgatattttaaaaatattcatcgagacaaatccaacaatatcttatatgccacaatttgtctttgtatattagtagaaaaatattgtcaaagtatgtt 19534030  T
Q  652 atatgaataatgcatatt 669  Q
    ||||||||||||||||||    
T  19534031 atatgaataatgcatatt 19534048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 463 - 536
Target Start/End: Complemental strand, 29052303 - 29052230
Alignment:
Q  463 tacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||||| |||||||  |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||    
T  29052303 tacatgtcgcagtcaactactacacacatgtcaatacacaactttggccattaatatctttaattatatataat 29052230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 577 - 650
Target Start/End: Original strand, 47386419 - 47386492
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  47386419 agacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagt 47386492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 556 - 648
Target Start/End: Complemental strand, 26170136 - 26170044
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaa 648  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||    
T  26170136 atattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaa 26170044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 556 - 660
Target Start/End: Complemental strand, 39307846 - 39307742
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| |||||  |  |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||| ||   ||||||||||| || |    
T  39307846 atattttaaaaatatttgttgagacaaattaaacaacattttacatactaacatttgtatttatatattagttaaaaagtagcatcaaagtaagtcatgt 39307747  T
Q  656 gaata 660  Q
    |||||    
T  39307746 gaata 39307742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 553 - 633
Target Start/End: Original strand, 55091296 - 55091376
Alignment:
Q  553 ttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||||| || ||||| ||| |||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||    
T  55091296 ttgatattttgaaaatatttatcgagacaaatcaaacaacatcttacatactaacatttgtatttatatattaattaaaaa 55091376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 556 - 660
Target Start/End: Original strand, 27407729 - 27407835
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttaca--tgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    ||||||||||  |||| ||| |||||| ||||||||||| |||||  |||||| |||| ||||||||||||||||||||| ||  |||||||||||||||    
T  27407729 atattttaaaagtatttatcgagacaactcaaacaacatcttacacatgctaatatttgtatttatatattagttaaaaagtagggtcaaagtaagttat 27407828  T
Q  654 atgaata 660  Q
     ||||||    
T  27407829 gtgaata 27407835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 37767070 - 37767164
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || ||||||||||||||| || |||||| ||||||||| |||||||||||  |||||||| ||||||||||||||||    
T  37767070 atattttgaaaatatttgtcgagacaaatcaaacaatatcttacattctaacatttgtatttatatatacgttaaaaagtatagtcaaagtaagt 37767164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 556 - 669
Target Start/End: Complemental strand, 17610430 - 17610317
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    ||||||| || |||||  || |||||||| ||||||||| ||||||||||| |||| |||||||| ||||| |||||| ||| |||||||||||| |  |    
T  17610430 atattttgaaaatatttgtcgagacaaattaaacaacatcttacatgctaatatttgtatttatacattagctaaaaaatatggtcaaagtaagtcaagt 17610331  T
Q  656 gaataatgcatatt 669  Q
    ||||| ||||||||    
T  17610330 gaatagtgcatatt 17610317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 552 - 672
Target Start/End: Complemental strand, 22197916 - 22197797
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || ||||||||  ||||||| |||||||||| |||||||||||   ||||| ||||||||||||| |||| || |||||||  | ||     
T  22197916 tttgatattttgaaaatattcattgagacaaaccaaacaacatcttacatgctaaatgttttacttatatattagttcaaaaataaagtcaaa-aatgta 22197818  T
Q  652 atatgaataatgcatattata 672  Q
    |||||||||||||| ||||||    
T  22197817 atatgaataatgcacattata 22197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 577 - 669
Target Start/End: Original strand, 50620815 - 50620907
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatt 669  Q
    |||||||||||| ||||| ||||||||||| |||  |||||||| |||||||||||  ||| ||||||||||||||  |||||| ||||||||    
T  50620815 agacaaatcaaaaaacatcttacatgctaatattagtatttatacattagttaaaatgtatggtcaaagtaagttaagtgaatagtgcatatt 50620907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 26170239 - 26170164
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||||||||||  |||||| |||| |||| |||||||| | ||| |||||||||||||||||||||||||    
T  26170239 gtttcaaaatacatgtccaagtcaaccacttcacatatgacaatgctcaattttgaccgttaatatctttaattat 26170164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 596 - 678
Target Start/End: Complemental strand, 29051792 - 29051712
Alignment:
Q  596 ttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaattg 678  Q
    |||||||||||  ||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||||| || |||||    
T  29051792 ttacatgctaa--tttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgtatattgtaaaattg 29051712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 456 - 525
Target Start/End: Complemental strand, 34316954 - 34316885
Alignment:
Q  456 ttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaa 525  Q
    ||||||||||||||| ||||||| |||| |||||||| ||||||| |||||||| | |||||||||||||    
T  34316954 ttcaaaatacatgtcgcagtcaaccacttcacacatgccaatacataactttgatcattaatatctttaa 34316885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 669
Target Start/End: Original strand, 51355161 - 51355265
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattata--gtcaaagtaagttatatgaataatgc 664  Q
    ||||| ||| ||||||||  ||||||||  || || ||||||||| |||||||||||||| |||||||||||  |||||||||| ||| |||| ||||||    
T  51355161 atattaatcgagacaaattgaacaacatcgtatatactaacatttgtatttatatattagctaaaaattatatggtcaaagtaaattacatgagtaatgc 51355260  T
Q  665 atatt 669  Q
    |||||    
T  51355261 atatt 51355265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 590 - 650
Target Start/End: Original strand, 2760873 - 2760933
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  2760873 aacatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagt 2760933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 556 - 652
Target Start/End: Original strand, 35064089 - 35064184
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtta 652  Q
    |||||||||| ||||||||| |||| ||||||||||||| ||||||| |||  ||| ||||| |||||||| |||||| || |||||||||| ||||    
T  35064089 atattttaaaaatattcatcgagacgaatcaaacaacatcttacatgataatgtttatatttgtatattag-taaaaaatacagtcaaagtatgtta 35064184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 454 - 529
Target Start/End: Original strand, 25296589 - 25296664
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||   |||||| |||| |||||||| |||| ||||| |||||||||||||| ||||||||||    
T  25296589 gtttcaaaatacatgtataagtcaaccacttcacacatgtcaatgcacaattttgaccgttaataactttaattat 25296664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 586 - 665
Target Start/End: Complemental strand, 35686493 - 35686414
Alignment:
Q  586 aaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||| ||||||| ||| |||| |||||||| |||||||||||| ||| ||||||||||||||  |||||| ||||    
T  35686493 aaacaacatcttacatgataatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgca 35686414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 35686659 - 35686584
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||| ||||||  |||||| |||| |||| ||| |||| ||||| |||||||||||||||||||||||||    
T  35686659 gtttcaaaatgcatgtccaagtcaaccacttcacatatgccaatgcacaattttgaccgttaatatctttaattat 35686584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 38717039 - 38716942
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaac---aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    ||||||| || |||||  || |||||||||||||   ||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  38717039 atattttgaaaatatttgtcgagacaaatcaaacaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 38716942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 587 - 662
Target Start/End: Complemental strand, 38721456 - 38721381
Alignment:
Q  587 aacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataat 662  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||| |||  ||||| ||||| || ||||||||    
T  38721456 aacaacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataat 38721381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 579 - 669
Target Start/End: Complemental strand, 19595832 - 19595742
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatt 669  Q
    ||||||||||||| || ||||||||||| |||| |||||||| |||||||||| | ||| || ||||||||| |  |||||| ||||||||    
T  19595832 acaaatcaaacaaaatattacatgctaatatttgtatttatacattagttaaagagtatggttaaagtaagtcaagtgaatagtgcatatt 19595742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 454 - 532
Target Start/End: Complemental strand, 19897873 - 19897795
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatata 532  Q
    ||||||||||||||||| ||||||| |  |  ||||||| |||||||||| ||||||  ||||||||||||||||||||    
T  19897873 gtttcaaaatacatgtcgcagtcaaccgttgtacacatgtcaatacacaattttgacatttaatatctttaattatata 19897795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 579 - 633
Target Start/End: Original strand, 27344083 - 27344137
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||    
T  27344083 acaaatcaaacaacatcttatatgttaatatttttatttatatattagttaaaaa 27344137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 443 - 529
Target Start/End: Original strand, 47386285 - 47386371
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||||||  |||||||||||||||||  ||||||  ||| |||||||| ||||  | || |||||||||||||||||||||||||    
T  47386285 atactccatccgtttcaaaatacatgtccaagtcaactacttcacacatgccaatgtataattttgaccgttaatatctttaattat 47386371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 52227304 - 52227238
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatct 521  Q
    |||||||||||||||| ||||| | | ||||||||||| |||||| ||||||||||| |||||||||    
T  52227304 tttcaaaatacatgtcgcagtctacctctacacacatgtcaatacccaactttgaccattaatatct 52227238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 556 - 633
Target Start/End: Complemental strand, 25918353 - 25918276
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||| || |||||  || |||||||||||||||||| ||||||||||| |||| |||||||| ||| ||||||||    
T  25918353 atattttgaagatatttgtcgagacaaatcaaacaacatcttacatgctaatatttatatttatacattggttaaaaa 25918276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 444 - 529
Target Start/End: Original strand, 32364332 - 32364417
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||| | ||||||||||||||| |||| ||  ||| |||||||| |||| ||||||||| | ||| |||||||||||||||    
T  32364332 tactccattcgattcaaaatacatgtcgcagttaactacttcacacatgtcaatgcacaactttaatcgtcaatatctttaattat 32364417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 50394282 - 50394225
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||| ||||||||| ||  ||||||||||||||||||||||||||| ||||||||||    
T  50394282 tgatggctaaatttggcaggtgcaccaaaccgttttcaagtaataaattagtaagtaa 50394225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 460 - 529
Target Start/End: Original strand, 51355053 - 51355122
Alignment:
Q  460 aaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||| |||||||||||||||| | || |||||| ||||||||||||| ||| ||||||| |||||||||    
T  51355053 aaatatatgtcacagtcaatcagttcatacatgaaaatacacaactttaaccattaatatatttaattat 51355122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 587 - 671
Target Start/End: Complemental strand, 56080102 - 56080017
Alignment:
Q  587 aacaacattttacatgctaacatttt-tatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattat 671  Q
    |||||||| ||| ||| ||||||||| ||| ||||||||||||||||| |||||||||||||| ||||  ||||| |||| |||||    
T  56080102 aacaacatcttatatgataacattttgtatgtatatattagttaaaaaatatagtcaaagtaaattatgcgaatagtgcacattat 56080017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 5428829 - 5428753
Alignment:
Q  453 tgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||| |||||||| |||| |||||||| ||||  |||| ||||||  |||| ||||||||||||    
T  5428829 tgtttcaaaatacatgtaacagtcaaccacttcacacatgtcaatgtacaattttgactattaacatctttaattat 5428753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 624
Target Start/End: Original strand, 30191581 - 30191653
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatatt 624  Q
    |||| |||||| || ||||| ||| ||||||||||||||| || ||||||| |||||||| ||||||||||||    
T  30191581 tttggtattttgaaaatatttatcgagacaaatcaaacaatatcttacatgttaacatttatatttatatatt 30191653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 48747315 - 48747371
Alignment:
Q  141 gatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||| ||| ||||||||    
T  48747315 gatgactaaatttggcaagtgcaccaaacctttttcaagtaatatagtggtaagtaa 48747371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 587 - 663
Target Start/End: Complemental strand, 27755842 - 27755762
Alignment:
Q  587 aacaacattttacatgctaacatttttatttatatat----tagttaaaaattatagtcaaagtaagttatatgaataatg 663  Q
    |||||||| |||| ||||||||||| |||||||||||    |||||||||| ||| |||||| ||||||||||||| ||||    
T  27755842 aacaacatcttacgtgctaacatttgtatttatatatatgttagttaaaaagtatggtcaaaataagttatatgaacaatg 27755762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 447 - 534
Target Start/End: Original strand, 29585843 - 29585930
Alignment:
Q  447 tccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatata 534  Q
    ||||| ||||| ||||||||  | |||||||| ||||| | |||||  |||| |||||||||||  ||||||||||||||||||||||    
T  29585843 tccatatgttttaaaatacacttgacagtcaaccactatatacatgttaatatacaactttgactattaatatctttaattatatata 29585930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 454 - 529
Target Start/End: Original strand, 54330700 - 54330775
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||| |||||  ||||||||||| |||| ||| |||| ||||| ||| ||||||||||| |||||||||    
T  54330700 gtttcaaaatagatgtccaagtcaatcacttcacatatgtcaatgcacaattttaaccgttaatatatttaattat 54330775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 454 - 509
Target Start/End: Original strand, 55091219 - 55091274
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttga 509  Q
    |||| ||||||||||||||||| || ||| ||||||||| ||||||||||||||||    
T  55091219 gttttaaaatacatgtcacagttaaccacaacacacatgtcaatacacaactttga 55091274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 567 - 669
Target Start/End: Original strand, 5472074 - 5472176
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcat 666  Q
    ||||| ||||| ||||||| ||||| ||  ||||| ||||||||| ||||||||||||  ||||||| | | |||||| ||| |||| |||||||| |||    
T  5472074 atatttatcaaaacaaatcgaacaaaatcatacatactaacatttgtatttatatattgattaaaaagtgtggtcaaattaaattatgtgaataatacat 5472173  T
Q  667 att 669  Q
    |||    
T  5472174 att 5472176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 21556045 - 21556095
Alignment:
Q  147 taaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||||||  ||||||| ||||| |||||||||||||||||||||||||||    
T  21556045 taaatttggtaaatgcatcaaactgttttcaagtaataaagtagtaagtaa 21556095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 459 - 529
Target Start/End: Original strand, 32871375 - 32871445
Alignment:
Q  459 aaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||||| |||||| |||||||||||  ||| ||||||||  |||||||||| ||||||||| |||||||||    
T  32871375 aaaataaatgtcaaagtcaatcactttacatatgacaatgtacaactttgatcgttaatatatttaattat 32871445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 661
Target Start/End: Complemental strand, 50815112 - 50815006
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaac-attttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttata 654  Q
    ||||||| || ||||| || ||||||||||||||||  ||  |||| | ||| |||| ||||||||||| ||||||||| || | ||||||||||||||     
T  50815112 atattttcaaaatatttattaagacaaatcaaacaaatatcatacacgttaatatttgtatttatatataagttaaaaaataaaatcaaagtaagttatg 50815013  T
Q  655 tgaataa 661  Q
    |||||||    
T  50815012 tgaataa 50815006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 444 - 526
Target Start/End: Complemental strand, 55801061 - 55800979
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaat 526  Q
    |||| ||| ||||||||||||||||||| |||||| ||||  | | ||| |||| ||||| ||||||||||||||| ||||||    
T  55801061 tacttcatctgtttcaaaatacatgtcaaagtcaaccactttatatatgtcaatgcacaattttgaccgttaatatatttaat 55800979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 2760740 - 2760813
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  2760740 gtttcaaaatacatgtccaagtcaaccacttcacatatgtcaatgcataattttgactgttaatatctttaatt 2760813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 536
Target Start/End: Complemental strand, 25633483 - 25633446
Alignment:
Q  499 cacaactttgaccgttaatatctttaattatatataat 536  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  25633483 cacaactttgaccattaatatctttaattatatataat 25633446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 443 - 528
Target Start/End: Complemental strand, 30446564 - 30446479
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatta 528  Q
    ||||||| || ||||||||||||||||  | ||||| || | |||| ||| |||| || |||||||| ||||||||||||||||||    
T  30446564 atactcccttcgtttcaaaatacatgttgctgtcaaccatttcacatatgccaatgcataactttgatcgttaatatctttaatta 30446479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 38416660 - 38416733
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  38416660 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 38416733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 44232087 - 44232160
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| |||| |||| |||||||| || || |||||| |||||||| |||||||    
T  44232087 gtttcaaaatacatgtccaagtcaaccacttcacatatgacaatgcataattttgactgttaatatttttaatt 44232160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 633
Target Start/End: Original strand, 53241891 - 53241972
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    |||||||||||||| ||||||||  ||| |||| ||| || | ||||||||||||||| | |||||||| |||| |||||||    
T  53241891 tttgatattttaaaaatattcatggagataaattaaaaaaaaatttacatgctaacatatgtatttataaattaattaaaaa 53241972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 4271924 - 4272024
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||||||| || ||| |||||||||| |||||||| |||| ||| ||| ||  |||| | ||||||||||| |  |||| || ||||||||||||||    
T  4271924 tttgatattttgaaaatactcatcaagacgaatcaaacgacatcttatatgatattatttatctttatatattaatagaaaaatacagtcaaagtaagtt 4272023  T
Q  652 a 652  Q
    |    
T  4272024 a 4272024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 624
Target Start/End: Original strand, 11794637 - 11794709
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatatt 624  Q
    |||||||||||||| ||||| ||  ||||||||| |||||||| ||| ||| ||| |||| ||||||||||||    
T  11794637 tttgatattttaaaaatatttattgagacaaatcgaacaacatgttatatgttaaaatttgtatttatatatt 11794709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 12625503 - 12625428
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||   |||||| |||| |||| |||  ||| ||||| ||||||||||||||| |||||||||    
T  12625503 gtttcaaaatacatgttcaagtcaaccactccacatatgctaatgcacaattttgaccgttaatatatttaattat 12625428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 12879627 - 12879678
Alignment:
Q  142 atgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaa 193  Q
    ||||||||||| | ||| | ||||| ||||||||||||||||||||||||||    
T  12879627 atgactaaattcggcaagtacaccagaccgttttcaagtaataaagtagtaa 12879678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 17610532 - 17610457
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||| ||||   |||||| |||| |||| ||| |||| ||||| |||||||||| ||||||||||||||    
T  17610532 gtttcaaaatatatgttcaagtcaaccacttcacatatgccaatgcacaattttgaccgttgatatctttaattat 17610457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 529
Target Start/End: Complemental strand, 27755942 - 27755899
Alignment:
Q  486 acacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||| |||| |||||||||||| ||||||||||||||||||    
T  27755942 acacatgccaatgcacaactttgacagttaatatctttaattat 27755899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 665
Target Start/End: Complemental strand, 34316636 - 34316562
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||| ||| |||||||||||| |||||||||||||||||| || |||  ||||||||||| |||| |||| ||||    
T  34316636 aacatcttatatgctaacatttgtatttatatattagttaacaa-tatgatcaaagtaagtcatataaatagtgca 34316562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 38721589 - 38721514
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||| ||||||   |||||| |||| |||| ||| |||| ||||| ||||| |||||||||||||||||||    
T  38721589 gtttcaaaagacatgttcaagtcaaccacttcacatatgccaatgcacaattttgatcgttaatatctttaattat 38721514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 527
Target Start/End: Complemental strand, 43967985 - 43967902
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    ||||||||  ||||||||||||||||   |||||| |||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  43967985 tactccatccgtttcaaaatacatgttcaagtcaaccacttcacatatgccaatgcataattttgactgttaatatctttaatt 43967902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 651
Target Start/End: Complemental strand, 50181210 - 50181115
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||| || ||||| ||  ||||||||| ||||| || ||||||||||| |||| |||||||| |||| ||||||| |||  | ||||||||||    
T  50181210 atattttgaaaatatttattgagacaaatcgaacaatatcttacatgctaatatttgtatttatacattaattaaaaaatatgattaaagtaagtt 50181115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 653
Target Start/End: Complemental strand, 53304541 - 53304478
Alignment:
Q  590 aacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttat 653  Q
    |||| |||||||||||| |||| ||||| |||||||||| |||| |||  ||||||||||||||    
T  53304541 aacaatttacatgctaatatttatatttgtatattagtttaaaaatatgatcaaagtaagttat 53304478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 55192076 - 55192001
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||| |||||  | || |||||| |||| ||| |||| ||||| ||||||||||||||| |||||||||    
T  55192076 gtttcaaaatatatgtccaaatcgatcacttcacatatgccaatccacaattttgaccgttaatatatttaattat 55192001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 599 - 650
Target Start/End: Complemental strand, 55800941 - 55800890
Alignment:
Q  599 catgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  55800941 catgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt 55800890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 454 - 524
Target Start/End: Complemental strand, 26125960 - 26125890
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatcttta 524  Q
    ||||||||||||||||   ||||||||||| |||| ||| |||| ||||| |||||  |||||||||||||    
T  26125960 gtttcaaaatacatgttcaagtcaatcacttcacatatggcaatgcacaattttgattgttaatatcttta 26125890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 552 - 630
Target Start/End: Complemental strand, 30867398 - 30867320
Alignment:
Q  552 tttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaa 630  Q
    |||||||||||||| ||||||||| || |||||| ||||| || ||| ||| || | ||||||||| ||||||| ||||    
T  30867398 tttgatattttaaaaatattcatcgagtcaaatccaacaatatcttatatgataccgtttttatttgtatattaattaa 30867320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 579 - 633
Target Start/End: Original strand, 32871494 - 32871548
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||||||||||||||  ||||| || |||||| |||||| ||||||||||||||    
T  32871494 acaaatcaaacaacatcctacatacttacatttgtatttacatattagttaaaaa 32871548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 454 - 532
Target Start/End: Original strand, 35380904 - 35380982
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatata 532  Q
    |||||||||||||||||  |||||| |||| |||| ||| ||||| | || |||||| |||||||| ||||||| ||||    
T  35380904 gtttcaaaatacatgtccaagtcaaccacttcacatatgccaatatataattttgactgttaatatatttaattttata 35380982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 455 - 529
Target Start/End: Original strand, 41955512 - 41955585
Alignment:
Q  455 tttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    |||| |||||||||||  ||| |||||||||||| ||| ||||||||||||||||   ||||||| |||||||||    
T  41955512 tttctaaatacatgtcgtagt-aatcactacacatatgtcaatacacaactttgattattaatatatttaattat 41955585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 494 - 536
Target Start/End: Original strand, 50685246 - 50685288
Alignment:
Q  494 caatacacaactttgaccgttaatatctttaattatatataat 536  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||    
T  50685246 caatacacaattttgacctttaatatatttaattatatataat 50685288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 596 - 634
Target Start/End: Original strand, 51456506 - 51456544
Alignment:
Q  596 ttacatgctaacatttttatttatatattagttaaaaat 634  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  51456506 ttacatgctaaaatttgtatttatatattagttaaaaat 51456544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 55190863 - 55190817
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatg 602  Q
    |||||||||| |||||||||||||| |||| |||||||| |||||||    
T  55190863 atattttaaaaatattcatcaagacgaatccaacaacatcttacatg 55190817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 611
Target Start/End: Complemental strand, 25633426 - 25633374
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacattt 611  Q
    |||||||||| ||||||||||| |||||||||||| ||   |||||||||||||||    
T  25633426 atattttaaaaatattcatcaaaacaaatcaaacatca---tacatgctaacattt 25633374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 45292084 - 45292011
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  ||||||  ||| |||| ||| |||| || || |||||| ||||||||||||||||    
T  45292084 gtttcaaaatacatgtccaagtcaactacttcacatatgccaatgcataattttgactgttaatatctttaatt 45292011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 527
Target Start/End: Original strand, 55209584 - 55209657
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaatt 527  Q
    |||||||||||||||||  |||||| ||||  ||| ||| |||| || || |||||| ||||||||||||||||    
T  55209584 gtttcaaaatacatgtccaagtcaaccactttacatatgccaatgcataattttgactgttaatatctttaatt 55209657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 577 - 678
Target Start/End: Original strand, 8966 - 9067
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaat 676  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | | ||||||||||||||| ||||||||||||||| || |||    
T  8966 agacaaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaat 9065  T
Q  677 tg 678  Q
    ||    
T  9066 tg 9067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 577 - 678
Target Start/End: Original strand, 138163 - 138264
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatattatacaat 676  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | | ||||||||||||||| ||||||||||||||| || |||    
T  138163 agacaaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaat 138262  T
Q  677 tg 678  Q
    ||    
T  138263 tg 138264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 567 - 678
Target Start/End: Complemental strand, 22919 - 22808
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcat 666  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| | | |||||| |||||||| ||||||||||||    
T  22919 atattcattgagacaaatcaaacaacatcttacatgctaacatttgtatttatatatgagttaaaaaatgtggtcaaaataagttatgtgaataatgcat 22820  T
Q  667 attatacaattg 678  Q
    ||| || |||||    
T  22819 attgtaaaattg 22808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 454 - 650
Target Start/End: Original strand, 100657 - 100853
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattatatataatgnnnnnnnnnnnnnntt 553  Q
    |||||||||||||||||  ||||||  ||| |||| ||| |||| ||||| ||||||||||||||||||||||||| || | |               ||    
T  100657 gtttcaaaatacatgtccaagtcaacaacttcacatatgccaatgcacaattttgaccgttaatatctttaattatctaaagtaaaaaattataaaaatt 100756  T
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    | ||||||| || |||||  || |||||||||||||||||| ||||| ||||| |||| |||||||| |||||||||||||||| ||||||||||||    
T  100757 taatattttgaaaatatttgtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagt 100853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 67881 - 67990
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatat 655  Q
    |||||||||| |||||  || |||||||||||||||||| ||||||| ||| |||| |||||||| |||||||||||| ||| |||||||||||| | ||    
T  67881 atattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaat 67980  T
Q  656 gaataatgca 665  Q
    ||||| ||||    
T  67981 gaatagtgca 67990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 444 - 529
Target Start/End: Original strand, 67770 - 67855
Alignment:
Q  444 tactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||  |||||||||||||||||  |||||| |||| |||| ||| |||| ||||| |||||||||||||||||||||||||    
T  67770 tactccatccgtttcaaaatacatgtctaagtcaaccacttcacatatgccaatgcacaattttgaccgttaatatctttaattat 67855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 554 - 660
Target Start/End: Complemental strand, 4101 - 3994
Alignment:
Q  554 tgatattttaaacatattcatcaagacaaatcaaacaacatt-ttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtta 652  Q
    ||||||||| || ||||| ||| |||||||||||| || | | |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||| ||    
T  4101 tgatattttgaaaatatttatcgagacaaatcaaaaaataatcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagcta 4002  T
Q  653 tatgaata 660  Q
    | ||||||    
T  4001 tgtgaata 3994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 1e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 460 - 633
Target Start/End: Original strand, 216889 - 217064
Alignment:
Q  460 aaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaat--tatatataatgnnnnnnnnnnnnnntttgat 557  Q
    ||||||||||| |||| || ||||||| ||||| |||||||||||||||| | || |||||||||||  ||||||||||               |||||     
T  216889 aaatacatgtcgcagtgaaccactacagacatgtcaatacacaactttgatcattcatatctttaatcatatatataatagaaaattataaaaatttgac 216988  T
Q  558 attttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaa 633  Q
    ||||| || ||||||||  |||||||||||||||||| ||| |||||||||||| ||||||||||||| |||||||    
T  216989 attttgaaaatattcattgagacaaatcaaacaacatcttatatgctaacatttgtatttatatattacttaaaaa 217064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 556 - 651
Target Start/End: Original strand, 53532 - 53627
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    |||||||||| ||||| ||| | |||||||||||||||| || |||||||| |||| || |||||||||||||||||| |||  |||||| |||||    
T  53532 atattttaaaaatatttatcgaaacaaatcaaacaacatcttgcatgctaaaatttgtaattatatattagttaaaaaatatgatcaaagcaagtt 53627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 577 - 650
Target Start/End: Original strand, 13850 - 13923
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||||| ||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  13850 agacaaattaaacaacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagt 13923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 577 - 660
Target Start/End: Original strand, 28784 - 28868
Alignment:
Q  577 agacaaatcaaacaa-cattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaata 660  Q
    ||||||||||||||| ||| ||| ||||||| |||| |||||||| |||||||||||| ||| ||||||||||| ||| ||||||    
T  28784 agacaaatcaaacaaacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaata 28868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 577 - 669
Target Start/End: Complemental strand, 71089 - 70998
Alignment:
Q  577 agacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagttatatgaataatgcatatt 669  Q
    |||||||||||||||||| ||| ||||||| |||| |||||||| |||||||||||| ||| |||||| ||||| |  |||||| ||||||||    
T  71089 agacaaatcaaacaacatcttaaatgctaatatttgtatttatacattagttaaaaa-tatggtcaaaataagtcaagtgaatagtgcatatt 70998  T

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Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 443 - 523
Target Start/End: Complemental strand, 71223 - 71143
Alignment:
Q  443 atactccatttgtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatcttt 523  Q
    |||||||||  |||||||||||||||||  |||||| |||| |||| ||| |||| ||||| ||||| ||||| |||||||    
T  71223 atactccatccgtttcaaaatacatgtccaagtcaaccacttcacatatgccaatgcacaattttgatcgttattatcttt 71143  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 161972 - 162043
Alignment:
Q  579 acaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagt 650  Q
    |||||| ||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||| ||||||    
T  161972 acaaattaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaatgtaagt 162043  T

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Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Original strand, 161847 - 161922
Alignment:
Q  454 gtttcaaaatacatgtcacagtcaatcactacacacatgacaatacacaactttgaccgttaatatctttaattat 529  Q
    ||||||||||||||||   |||||| ||||  ||| ||| |||| ||||| |||||| ||||||||||||||||||    
T  161847 gtttcaaaatacatgttcaagtcaaccactttacatatgtcaatgcacaattttgactgttaatatctttaattat 161922  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 669
Target Start/End: Original strand, 315625 - 315722
Alignment:
Q  567 atattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagtt-aaaaattatagtcaaagtaagttatatgaataatgca 665  Q
    ||||||||  |||||||||||||||||| ||||||||||||      |||| |||||||||| ||||| | | |||||||||||| || |||||||||||    
T  315625 atattcattgagacaaatcaaacaacatcttacatgctaac------atttgtatattagttaaaaaaatgtggtcaaagtaagtaatgtgaataatgca 315718  T

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Target: scaffold0330 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 1936 - 1879
Alignment:
Q  140 tgatgactaaatttgtcaaatgcaccaaaccgttttcaagtaataaagtagtaagtaa 197  Q
    ||||||| ||||| | ||| |||||| || ||||||||||||||||||||||||||||    
T  1936 tgatgacaaaattcggcaagtgcaccgaatcgttttcaagtaataaagtagtaagtaa 1879  T

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Target: scaffold0608 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 651
Target Start/End: Complemental strand, 1670 - 1575
Alignment:
Q  556 atattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaagtt 651  Q
    ||||||| || ||||| ||  ||||||||| ||||| || ||||||||||| |||| |||||||| |||| ||||||| |||  | ||||||||||    
T  1670 atattttgaaaatatttattgagacaaatcgaacaatatcttacatgctaatatttgtatttatacattaattaaaaaatatgattaaagtaagtt 1575  T

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