View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4638-Insertion-10 (Length: 378)
Name: NF4638-Insertion-10
Description: NF4638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4638-Insertion-10 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 8 - 378
Target Start/End: Original strand, 5048829 - 5049199
Alignment:
| Q |
8 |
gtaggaatctgtatccttctcattaaaaagtatgttataattatgtcataccaatttgcaaatatcaatgaaaaatatggcatgaattttagaagtattt |
107 |
Q |
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| T |
5048829 |
gtaggaatctgtatccttctcattaaaaagtatgttataattatgtcataccaatttgcaaatatcaatgaaaaatatggcatgaattttagaagtattt |
5048928 |
T |
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| Q |
108 |
ggtagcttaaattatactctgcttgaaatatgcacctatagcttacaataatatggaatactgaattatacctgaagctcacttgaatgatttgaggctg |
207 |
Q |
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| T |
5048929 |
ggtaacttaaattatactctgcttgaaatatgcacctatagcttacaataatatggaatactgaattatacctgaagctcacttgaatgatttgaggctg |
5049028 |
T |
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| Q |
208 |
ctgcacttggttgaatattttcaaactcgaaaaaagagatgaaaatagaatcaagaaggaaaagacaacccaacaatccaaacatgagaacaatagttct |
307 |
Q |
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| T |
5049029 |
ctgcacttggttgaatattttcaaactcgaaaaaagagatgaaaatagaatcaagaaggaaaagacaacccaacaatccaaacatgagaacaatagttct |
5049128 |
T |
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| Q |
308 |
aatgttcttttttccaacatagaatcccttaatagaattgtactttgaagaatcatttttcagaccatgta |
378 |
Q |
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| T |
5049129 |
aatgttcttttttccaacatagaatcccttaatagaattgtactttgaagaatcatttttcagaccatgta |
5049199 |
T |
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