View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4638-Insertion-14 (Length: 260)
Name: NF4638-Insertion-14
Description: NF4638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4638-Insertion-14 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 7 - 260
Target Start/End: Original strand, 34679877 - 34680129
Alignment:
| Q |
7 |
atatgtatatatgtacttggtcttgatgcagtcaagagagacaaacaagtctattgtcatgttaatagtttttacagacactcattcagacacgtatacg |
106 |
Q |
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| T |
34679877 |
atatgtatctatgtacttggtcttgatgcagtcaagagagacaaacaagtctattgtcatgttaatagtttttacagacactcattcagacacgtatacg |
34679976 |
T |
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| Q |
107 |
tgtttctttgatatgtcaacttcattttagtgtacccaaaatattcccacttttttatttcatatacctaattactatatacttatcaaattccacttca |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
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| T |
34679977 |
tgtttctttgatatgtcaacttcattttagtgtacccaaaatattcccacttttttatttcatatacctaattacca-gtacttatcaaattccacttca |
34680075 |
T |
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| Q |
207 |
caattactcctaaacaatcaagttcaatttgatgtcactctcaccattaatgtc |
260 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
34680076 |
caattactcctaaacaatccagttcaatttgatgtcactctcaccattaatgtc |
34680129 |
T |
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