View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4638-Insertion-18 (Length: 152)

Name: NF4638-Insertion-18
Description: NF4638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4638-Insertion-18
NF4638-Insertion-18
[»] chr3 (47 HSPs)
chr3 (8-149)||(35222903-35223045)
chr3 (58-152)||(14027971-14028063)
chr3 (58-144)||(13414441-13414525)
chr3 (8-102)||(13845477-13845572)
chr3 (8-94)||(40993287-40993374)
chr3 (8-128)||(18426935-18427056)
chr3 (58-94)||(7928470-7928506)
chr3 (42-152)||(21479080-21479193)
chr3 (58-96)||(8789553-8789591)
chr3 (8-133)||(20503446-20503572)
chr3 (58-96)||(25093520-25093558)
chr3 (58-100)||(38731232-38731274)
chr3 (59-96)||(10690266-10690303)
chr3 (65-133)||(1438785-1438853)
chr3 (59-95)||(11507479-11507515)
chr3 (70-122)||(14209105-14209157)
chr3 (58-97)||(2941575-2941614)
chr3 (58-152)||(7614418-7614510)
chr3 (58-96)||(8039838-8039876)
chr3 (58-96)||(8383275-8383313)
chr3 (66-96)||(11493372-11493402)
chr3 (65-123)||(12703998-12704056)
chr3 (58-96)||(20691337-20691375)
chr3 (62-96)||(32804547-32804581)
chr3 (58-152)||(39756198-39756292)
chr3 (62-96)||(49505161-49505195)
chr3 (118-152)||(51512243-51512277)
chr3 (63-96)||(2731830-2731863)
chr3 (11-127)||(10954939-10955056)
chr3 (63-96)||(11313808-11313841)
chr3 (63-96)||(16192758-16192791)
chr3 (61-94)||(29508464-29508497)
chr3 (58-94)||(11665964-11666000)
chr3 (68-96)||(14840304-14840332)
chr3 (58-94)||(15314879-15314915)
chr3 (58-94)||(17005622-17005658)
chr3 (58-94)||(24633404-24633440)
chr3 (58-94)||(25948890-25948926)
chr3 (58-94)||(26508130-26508166)
chr3 (58-94)||(28918021-28918057)
chr3 (58-94)||(30184109-30184145)
chr3 (42-96)||(34307765-34307821)
chr3 (70-122)||(34910309-34910361)
chr3 (61-100)||(8930836-8930875)
chr3 (69-96)||(11251996-11252023)
chr3 (61-96)||(11658833-11658868)
chr3 (61-96)||(25347561-25347596)
[»] chr7 (47 HSPs)
chr7 (5-152)||(18212982-18213137)
chr7 (69-152)||(1656640-1656721)
chr7 (58-107)||(39138451-39138500)
chr7 (62-100)||(17851445-17851483)
chr7 (58-96)||(22602713-22602751)
chr7 (58-93)||(640134-640169)
chr7 (62-129)||(22868027-22868094)
chr7 (58-100)||(2948697-2948739)
chr7 (58-96)||(5835265-5835303)
chr7 (58-96)||(9482952-9482990)
chr7 (58-96)||(20549809-20549847)
chr7 (58-100)||(24146830-24146872)
chr7 (59-96)||(27732243-27732280)
chr7 (8-94)||(5409783-5409875)
chr7 (58-94)||(15902842-15902878)
chr7 (61-128)||(6630918-6630985)
chr7 (61-96)||(12278853-12278888)
chr7 (58-127)||(17307883-17307949)
chr7 (58-96)||(3520345-3520383)
chr7 (58-96)||(3721111-3721149)
chr7 (62-96)||(5548694-5548728)
chr7 (58-96)||(7328694-7328732)
chr7 (58-96)||(16341514-16341552)
chr7 (58-96)||(19206068-19206106)
chr7 (58-96)||(19992019-19992057)
chr7 (58-100)||(22484039-22484081)
chr7 (58-96)||(23849461-23849499)
chr7 (58-96)||(27093416-27093454)
chr7 (58-96)||(27184847-27184885)
chr7 (58-128)||(27945027-27945097)
chr7 (58-96)||(32287466-32287504)
chr7 (62-96)||(32308138-32308172)
chr7 (74-147)||(8234113-8234186)
chr7 (58-94)||(15680829-15680865)
chr7 (62-94)||(18013081-18013113)
chr7 (58-94)||(18039019-18039055)
chr7 (58-94)||(21560523-21560559)
chr7 (58-94)||(24339662-24339698)
chr7 (60-96)||(26329387-26329423)
chr7 (58-94)||(26733324-26733360)
chr7 (9-94)||(32093967-32094059)
chr7 (58-94)||(41020516-41020552)
chr7 (69-96)||(2424632-2424659)
chr7 (61-96)||(8239056-8239091)
chr7 (61-96)||(18233604-18233639)
chr7 (59-94)||(26033465-26033500)
chr7 (69-96)||(29787383-29787410)
[»] chr2 (38 HSPs)
chr2 (5-128)||(20242676-20242800)
chr2 (5-128)||(41843427-41843556)
chr2 (58-151)||(36096378-36096471)
chr2 (5-128)||(34784920-34785055)
chr2 (8-122)||(24009288-24009402)
chr2 (63-128)||(21616748-21616813)
chr2 (62-102)||(20922935-20922975)
chr2 (58-93)||(5367213-5367248)
chr2 (58-152)||(44860284-44860376)
chr2 (58-96)||(18889594-18889632)
chr2 (58-96)||(23718044-23718082)
chr2 (58-96)||(24105716-24105754)
chr2 (58-96)||(38355890-38355928)
chr2 (58-96)||(39279693-39279731)
chr2 (64-100)||(2665897-2665933)
chr2 (58-122)||(12668426-12668490)
chr2 (64-128)||(15909641-15909705)
chr2 (61-93)||(28524447-28524479)
chr2 (62-94)||(31808097-31808129)
chr2 (58-94)||(34691808-34691844)
chr2 (58-94)||(34714220-34714256)
chr2 (8-94)||(2438671-2438758)
chr2 (61-96)||(37411250-37411285)
chr2 (58-96)||(18276539-18276577)
chr2 (59-101)||(30471051-30471093)
chr2 (58-96)||(35056886-35056924)
chr2 (62-96)||(35449531-35449565)
chr2 (65-94)||(28677929-28677958)
chr2 (59-96)||(30527599-30527636)
chr2 (58-102)||(18054806-18054850)
chr2 (58-94)||(18622626-18622662)
chr2 (58-94)||(19536400-19536436)
chr2 (104-152)||(26769473-26769521)
chr2 (55-94)||(28412370-28412407)
chr2 (61-132)||(1239666-1239737)
chr2 (65-96)||(17520080-17520111)
chr2 (69-96)||(21782832-21782859)
chr2 (58-93)||(36756347-36756382)
[»] chr6 (49 HSPs)
chr6 (9-133)||(5626653-5626774)
chr6 (58-149)||(16488593-16488684)
chr6 (8-119)||(17327602-17327719)
chr6 (58-122)||(18367828-18367892)
chr6 (8-122)||(34595126-34595241)
chr6 (5-128)||(12696310-12696439)
chr6 (58-96)||(7265596-7265634)
chr6 (58-96)||(9025497-9025535)
chr6 (61-127)||(26562676-26562742)
chr6 (58-94)||(7027262-7027298)
chr6 (61-96)||(11591876-11591911)
chr6 (43-96)||(32511657-32511707)
chr6 (58-96)||(7086813-7086851)
chr6 (58-96)||(7377997-7378035)
chr6 (58-96)||(9617452-9617490)
chr6 (58-96)||(9629401-9629439)
chr6 (58-96)||(9658897-9658935)
chr6 (58-96)||(13360375-13360413)
chr6 (62-96)||(19040370-19040404)
chr6 (58-128)||(19044450-19044520)
chr6 (62-102)||(4388097-4388137)
chr6 (60-96)||(30866149-30866185)
chr6 (58-96)||(5732513-5732551)
chr6 (58-96)||(7996381-7996419)
chr6 (58-96)||(8022382-8022420)
chr6 (58-92)||(9027200-9027234)
chr6 (58-96)||(9195757-9195795)
chr6 (58-128)||(10770677-10770747)
chr6 (58-96)||(13364708-13364746)
chr6 (58-128)||(16766683-16766753)
chr6 (58-128)||(16833294-16833364)
chr6 (58-96)||(21924938-21924976)
chr6 (58-128)||(28152085-28152154)
chr6 (58-96)||(34073350-34073388)
chr6 (61-94)||(12627583-12627616)
chr6 (58-94)||(1700372-1700408)
chr6 (58-94)||(7151432-7151468)
chr6 (42-128)||(8776963-8777046)
chr6 (61-121)||(8931608-8931668)
chr6 (58-94)||(9522911-9522947)
chr6 (62-94)||(17341671-17341703)
chr6 (58-94)||(26178684-26178720)
chr6 (58-94)||(33001292-33001328)
chr6 (58-121)||(7801159-7801222)
chr6 (58-93)||(9911531-9911566)
chr6 (62-96)||(10339132-10339167)
chr6 (61-96)||(13851754-13851789)
chr6 (65-132)||(24833243-24833310)
chr6 (69-96)||(31579239-31579266)
[»] chr5 (35 HSPs)
chr5 (9-133)||(30098991-30099116)
chr5 (58-149)||(21814226-21814317)
chr5 (58-128)||(6401484-6401554)
chr5 (59-107)||(39758279-39758327)
chr5 (58-107)||(32426872-32426921)
chr5 (8-99)||(42029767-42029859)
chr5 (61-96)||(41091263-41091298)
chr5 (58-96)||(3966521-3966559)
chr5 (58-96)||(6471892-6471930)
chr5 (58-96)||(28588677-28588715)
chr5 (58-96)||(30502391-30502429)
chr5 (58-96)||(30542734-30542772)
chr5 (60-96)||(18421846-18421882)
chr5 (64-96)||(24273039-24273071)
chr5 (64-96)||(24389143-24389175)
chr5 (8-94)||(21576697-21576784)
chr5 (61-96)||(23015995-23016030)
chr5 (8-133)||(31084304-31084435)
chr5 (58-96)||(14873535-14873573)
chr5 (58-96)||(16203798-16203836)
chr5 (54-96)||(17593721-17593763)
chr5 (58-96)||(17925175-17925213)
chr5 (58-96)||(36838561-36838599)
chr5 (61-94)||(5467984-5468017)
chr5 (58-127)||(6247609-6247678)
chr5 (58-94)||(15884008-15884044)
chr5 (58-94)||(21191059-21191095)
chr5 (58-122)||(33178017-33178081)
chr5 (58-94)||(37328847-37328883)
chr5 (58-94)||(43564901-43564937)
chr5 (58-133)||(11685920-11685995)
chr5 (82-145)||(18316952-18317015)
chr5 (58-101)||(18592086-18592129)
chr5 (62-93)||(27144484-27144515)
chr5 (61-96)||(34879368-34879403)
[»] chr4 (36 HSPs)
chr4 (8-128)||(5414113-5414245)
chr4 (60-122)||(40613442-40613504)
chr4 (58-102)||(44132647-44132691)
chr4 (8-94)||(49431046-49431133)
chr4 (8-152)||(3947713-3947862)
chr4 (58-96)||(5775361-5775399)
chr4 (58-96)||(16189727-16189765)
chr4 (63-96)||(36635342-36635375)
chr4 (58-102)||(19097897-19097941)
chr4 (58-94)||(22234893-22234929)
chr4 (64-96)||(22440609-22440641)
chr4 (58-94)||(40179639-40179675)
chr4 (58-94)||(54580026-54580062)
chr4 (65-96)||(903940-903971)
chr4 (61-96)||(13134468-13134503)
chr4 (58-96)||(8423721-8423759)
chr4 (58-96)||(9996858-9996896)
chr4 (62-96)||(10499277-10499311)
chr4 (58-128)||(12797341-12797410)
chr4 (54-96)||(17344518-17344560)
chr4 (58-96)||(18576040-18576078)
chr4 (58-96)||(30982881-30982919)
chr4 (58-100)||(46083994-46084036)
chr4 (58-96)||(46160914-46160952)
chr4 (8-94)||(12895067-12895155)
chr4 (58-91)||(15029788-15029821)
chr4 (59-96)||(26504303-26504340)
chr4 (8-152)||(23292938-23293089)
chr4 (58-94)||(29205464-29205500)
chr4 (59-99)||(32915610-32915650)
chr4 (58-94)||(35157988-35158024)
chr4 (68-96)||(35161054-35161082)
chr4 (58-94)||(42640549-42640585)
chr4 (65-96)||(7970537-7970568)
chr4 (65-96)||(8402752-8402783)
chr4 (61-96)||(24343525-24343560)
[»] chr1 (62 HSPs)
chr1 (8-128)||(10577687-10577808)
chr1 (58-102)||(30749852-30749896)
chr1 (58-102)||(30771303-30771347)
chr1 (5-94)||(1486653-1486748)
chr1 (8-122)||(25934608-25934734)
chr1 (58-152)||(6415004-6415099)
chr1 (58-128)||(1815243-1815313)
chr1 (58-96)||(1864883-1864921)
chr1 (58-132)||(24577189-24577263)
chr1 (58-96)||(34371731-34371769)
chr1 (58-96)||(44482248-44482286)
chr1 (63-148)||(25098563-25098648)
chr1 (58-94)||(13997903-13997939)
chr1 (8-96)||(19562567-19562662)
chr1 (58-146)||(22881619-22881707)
chr1 (62-96)||(7918218-7918252)
chr1 (62-96)||(10233271-10233305)
chr1 (9-102)||(12918957-12919051)
chr1 (61-95)||(17705592-17705626)
chr1 (58-96)||(20157353-20157391)
chr1 (62-96)||(25361904-25361938)
chr1 (58-96)||(36878479-36878517)
chr1 (58-100)||(39953149-39953191)
chr1 (58-96)||(40181889-40181927)
chr1 (58-127)||(10572592-10572661)
chr1 (64-125)||(12443469-12443530)
chr1 (58-94)||(5898269-5898305)
chr1 (58-94)||(5944303-5944339)
chr1 (58-94)||(9828064-9828100)
chr1 (64-96)||(19324580-19324612)
chr1 (58-94)||(52903269-52903305)
chr1 (58-93)||(13436479-13436514)
chr1 (59-122)||(34315704-34315767)
chr1 (58-133)||(38075973-38076048)
chr1 (58-101)||(45534193-45534236)
chr1 (58-96)||(2784574-2784612)
chr1 (58-96)||(6427368-6427406)
chr1 (58-96)||(9709838-9709876)
chr1 (58-96)||(14332645-14332683)
chr1 (58-96)||(23636052-23636090)
chr1 (58-96)||(25272500-25272538)
chr1 (58-128)||(37598818-37598887)
chr1 (58-96)||(38503338-38503376)
chr1 (58-100)||(39130770-39130812)
chr1 (61-130)||(17831537-17831606)
chr1 (62-135)||(23622297-23622370)
chr1 (58-95)||(29163384-29163421)
chr1 (63-96)||(36906015-36906048)
chr1 (62-94)||(398772-398804)
chr1 (58-94)||(18337349-18337385)
chr1 (60-96)||(31015061-31015097)
chr1 (68-96)||(34298454-34298482)
chr1 (62-94)||(35919283-35919315)
chr1 (58-94)||(40258936-40258972)
chr1 (58-94)||(47989517-47989553)
chr1 (58-94)||(48148040-48148076)
chr1 (58-94)||(51410045-51410081)
chr1 (65-96)||(12713337-12713368)
chr1 (65-96)||(12717428-12717459)
chr1 (63-94)||(17425101-17425132)
chr1 (59-94)||(34257914-34257949)
chr1 (58-152)||(38078664-38078759)
[»] chr8 (40 HSPs)
chr8 (58-135)||(13844599-13844676)
chr8 (43-132)||(4786329-4786415)
chr8 (58-129)||(14134684-14134755)
chr8 (58-109)||(18964182-18964233)
chr8 (58-97)||(26902178-26902217)
chr8 (58-94)||(11927089-11927125)
chr8 (58-93)||(8847277-8847312)
chr8 (58-125)||(31236580-31236647)
chr8 (61-96)||(34897103-34897138)
chr8 (58-96)||(11803277-11803315)
chr8 (58-128)||(15816132-15816202)
chr8 (8-121)||(43737763-43737877)
chr8 (58-107)||(34451040-34451089)
chr8 (58-152)||(3951539-3951632)
chr8 (58-94)||(11944685-11944721)
chr8 (60-96)||(27213565-27213601)
chr8 (58-93)||(28384997-28385032)
chr8 (59-94)||(34222967-34223002)
chr8 (62-96)||(3025569-3025603)
chr8 (58-96)||(4611552-4611590)
chr8 (58-96)||(7658481-7658519)
chr8 (58-96)||(12606832-12606870)
chr8 (58-96)||(20679398-20679436)
chr8 (58-100)||(22493508-22493550)
chr8 (62-92)||(24362209-24362239)
chr8 (58-96)||(33382022-33382060)
chr8 (58-96)||(33405387-33405425)
chr8 (58-96)||(39954282-39954320)
chr8 (58-96)||(40332209-40332247)
chr8 (58-91)||(8293848-8293881)
chr8 (63-96)||(14731730-14731763)
chr8 (58-94)||(4948672-4948708)
chr8 (58-149)||(8342939-8343028)
chr8 (58-94)||(25566861-25566897)
chr8 (58-102)||(28747438-28747482)
chr8 (61-96)||(12570514-12570549)
chr8 (61-96)||(31580133-31580168)
chr8 (63-94)||(36934690-36934721)
chr8 (69-96)||(37283824-37283851)
chr8 (61-96)||(38079017-38079052)
[»] scaffold0623 (1 HSPs)
scaffold0623 (58-128)||(5999-6069)
[»] scaffold0116 (1 HSPs)
scaffold0116 (58-128)||(9884-9954)
[»] scaffold0123 (1 HSPs)
scaffold0123 (59-96)||(44529-44566)
[»] scaffold0306 (1 HSPs)
scaffold0306 (8-128)||(13386-13513)
[»] scaffold0152 (1 HSPs)
scaffold0152 (8-128)||(21814-21941)
[»] scaffold0171 (2 HSPs)
scaffold0171 (42-94)||(23440-23494)
scaffold0171 (62-94)||(23531-23563)
[»] scaffold0122 (1 HSPs)
scaffold0122 (70-152)||(7972-8054)
[»] scaffold0044 (1 HSPs)
scaffold0044 (58-96)||(53198-53236)
[»] scaffold0036 (1 HSPs)
scaffold0036 (58-96)||(9750-9788)
[»] scaffold0020 (1 HSPs)
scaffold0020 (58-96)||(135315-135353)
[»] scaffold0279 (1 HSPs)
scaffold0279 (58-133)||(17753-17826)
[»] scaffold0361 (1 HSPs)
scaffold0361 (70-124)||(14520-14574)
[»] scaffold0236 (1 HSPs)
scaffold0236 (58-96)||(25771-25809)
[»] scaffold0110 (1 HSPs)
scaffold0110 (58-96)||(28868-28906)
[»] scaffold0022 (2 HSPs)
scaffold0022 (58-100)||(99907-99949)
scaffold0022 (61-96)||(90861-90896)
[»] scaffold0227 (1 HSPs)
scaffold0227 (9-41)||(15045-15077)
[»] scaffold0050 (1 HSPs)
scaffold0050 (58-94)||(70298-70334)
[»] scaffold0025 (1 HSPs)
scaffold0025 (58-94)||(23790-23826)
[»] scaffold0021 (1 HSPs)
scaffold0021 (58-94)||(130502-130538)
[»] scaffold0004 (1 HSPs)
scaffold0004 (62-102)||(101012-101052)


Alignment Details
Target: chr3 (Bit Score: 75; Significance: 7e-35; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 35223045 - 35222903
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaag 103  Q
    |||||||||||||||| | |||||||||||||||    ||||| | |||||   |||||||||||||||||||| ||||||||||||||||||||||| |    
T  35223045 gacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccga---caccgacacatataattacattgaattatgtgattttctaaaaatg 35222949  T
Q  104 ttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgt 149  Q
    |||||| |||||||||||| |||||||||||| ||| |||||||||    
T  35222948 ttagttgtgtcggcgtgtctgtgtcgtgtctggtgtccgtgtccgt 35222903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 14028063 - 14027971
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |||| | |||||  |||||||||||||||| | ||| ||||||||||||    
T  14028063 caccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcg--gtgtccgtgtcgtgtccggtgtccgtgtccgtatc 14027971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 13414525 - 13414441
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtg 144  Q
    |||||||||||||||||||| |||||||| ||||||||||||| | || ||| |||||  |||||||||||||||||| ||| ||||    
T  13414525 caccgacacatataattacattgaattatttgattttctaaaacatttggttgtgtcg--gtgtccgtgtcgtgtctggtgtccgtg 13414441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 13845477 - 13845572
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    ||||||||| |||||||| ||||| |||||||||    || |||| |||||||||   ||||||||||||||||||| ||| |||||||||||||||||    
T  13845477 gacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacacc---gacacatataattacactgcattttgtgattttctaaaaaa 13845572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 40993287 - 40993374
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgt----caggtgtcgtatccgacaccaccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||| ||| ||||||| ||||    || ||||||| |||||   |||||||||||||||||||||||||||||||||||||    
T  40993287 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccga---caccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 18427056 - 18426935
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaag 103  Q
    |||||||||| ||| ||||||||||| ||| | |    |||||||||||||||||   |||| |||||||||||| ||||||||||||||| | |||       
T  18427056 gacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacacc---gacatatataattacaccgaattatgtgattttttgaaatta 18426960  T
Q  104 ttagttttgtcggcgtgtccgtgtc 128  Q
    |||||  ||||||||||||||||||    
T  18426959 ttagtggtgtcggcgtgtccgtgtc 18426935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 7928506 - 7928470
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  7928506 caccgacacatataattacactgaattatgtgatttt 7928470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 21479193 - 21479080
Alignment:
Q  42 gtgtcgtatccgacacc---accgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatg 138  Q
    ||||||| |||||||||   ||||||||   ||||||||||||||| ||||||||| | |||   |||| | |||||||||||| |||||||||| | ||    
T  21479193 gtgtcgtgtccgacaccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtg 21479094  T
Q  139 ttcgtgtccgtatc 152  Q
    | ||||||||||||    
T  21479093 tccgtgtccgtatc 21479080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 8789553 - 8789591
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  8789553 caccgacacatataattacacggaattatgtgattttct 8789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 20503572 - 20503446
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaag 103  Q
    |||||||||||||| ||| ||||||| |||||||    ||||||| ||   || ||||||||| | ||||||||||||||||||| ||||| | |||       
T  20503572 gacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtc---caacaccgacacttgtaattacactgaattatgtcattttttcaaatta 20503476  T
Q  104 ttagttttgtcggcgtgtccgtgtcgtgtc 133  Q
    || ||| |||||||||||| ||||||||||    
T  20503475 tttgttgtgtcggcgtgtcagtgtcgtgtc 20503446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 25093558 - 25093520
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  25093558 caccgacacatataattacactgaattgtgtgattttct 25093520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 38731274 - 38731232
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaa 100  Q
    ||||||||||||||| ||||||||||||||||||||| |||||    
T  38731274 caccgacacatataactacactgaattatgtgattttttaaaa 38731232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 10690266 - 10690303
Alignment:
Q  59 accgacacatataattacactgaattatgtgattttct 96  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  10690266 accgacaaatataattacactgaattatgtgattttct 10690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 1438853 - 1438785
Alignment:
Q  65 acatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtc 133  Q
    ||||||||||| |||||||||||||||||||| |||  |||||   |||||| ||||| ||||||||||    
T  1438853 acatataattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtcagtgtcgtgtc 1438785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 11507479 - 11507515
Alignment:
Q  59 accgacacatataattacactgaattatgtgattttc 95  Q
    ||||| |||||||||||||||||||||||||||||||    
T  11507479 accgaaacatataattacactgaattatgtgattttc 11507515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 14209157 - 14209105
Alignment:
Q  70 taattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtc 122  Q
    ||||||||||||||||||||||||| |||||   |||||| ||||||||||||    
T  14209157 taattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 2941614 - 2941575
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttcta 97  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  2941614 caccgacacatataattacactgtattttgtgattttcta 2941575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 7614418 - 7614510
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    |||||||| ||||||||| |||||||||||||||||||| |||   |||  | |||||  ||||| ||||||| |||||| || |||||||||||    
T  7614418 caccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcg--gtgtctgtgtcgtatctgatatttgtgtccgtatc 7614510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 8039838 - 8039876
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  8039838 caccgacacatataattacactgaattatataattttct 8039876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 8383313 - 8383275
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  8383313 caccgacacttataattacactgaattatatgattttct 8383275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 96
Target Start/End: Original strand, 11493372 - 11493402
Alignment:
Q  66 catataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||    
T  11493372 catataattacactgaattatgtgattttct 11493402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 12704056 - 12703998
Alignment:
Q  65 acatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtcc 123  Q
    ||||||||||||||||||||||||| |||||| |||   |||||  |||||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtcc 12703998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 20691375 - 20691337
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  20691375 caccgacacatatgattacactgaattatgtcattttct 20691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 32804547 - 32804581
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||| ||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttct 32804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 39756292 - 39756198
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    ||||||||| | |||||| | | |||||||||||||| | |||   ||| ||||||||||||||| |||||||||| ||||| ||| ||| ||||    
T  39756292 caccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtcgtgtccgatgtccgtatccatatc 39756198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 49505161 - 49505195
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||| ||||||||||||||||    
T  49505161 gacacatataattacactaaattatgtgattttct 49505195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 152
Target Start/End: Original strand, 51512243 - 51512277
Alignment:
Q  118 gtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    ||||| |||||||||||||||||||||||||||||    
T  51512243 gtgtctgtgtcgtgtctgatgttcgtgtccgtatc 51512277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 2731863 - 2731830
Alignment:
Q  63 acacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||| ||||||||||||||||    
T  2731863 acacatataattacacttaattatgtgattttct 2731830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 10955056 - 10954939
Alignment:
Q  11 actcctcggataaggtgtgtccccgtgt----caggtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaagtta 106  Q
    ||||||||||| ||| ||||||| ||||    || ||||||| |||||   ||||||||| | | ||||||||||||||||||||||| | |||   |||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga---caccgacacttgtgattacactgaattatgtgattttttcaaattatta 10954960  T
Q  107 gttttgtcggcgtgtccgtgt 127  Q
    ||| |||||||||||| ||||    
T  10954959 gttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 11313808 - 11313841
Alignment:
Q  63 acacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||| ||||||||||||||||    
T  11313808 acacatataattacactaaattatgtgattttct 11313841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 16192758 - 16192791
Alignment:
Q  63 acacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||| |||||||    
T  16192758 acacatataattacactgaattatgttattttct 16192791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 29508497 - 29508464
Alignment:
Q  61 cgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||||||||| |||||||    
T  29508497 cgacacatataattacactgaattatatgatttt 29508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 11666000 - 11665964
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||||| |||| |||||||||    
T  11666000 caccgacacatataattacactaaattgtgtgatttt 11665964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 96
Target Start/End: Original strand, 14840304 - 14840332
Alignment:
Q  68 tataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||    
T  14840304 tataattacactgaattatgtgattttct 14840332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 15314879 - 15314915
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  15314879 caccaacacatataattacactaaattatgtgatttt 15314915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 17005622 - 17005658
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  17005622 caccgacacttataattacactgaattatatgatttt 17005658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 24633404 - 24633440
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  24633404 caccgacacatataattacattgaattacgtgatttt 24633440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 25948890 - 25948926
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||| |||| |||||||||||||||||||||||||||    
T  25948890 caccaacacttataattacactgaattatgtgatttt 25948926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 26508166 - 26508130
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgatttt 26508130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 28918057 - 28918021
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  28918057 caccgacacttgtaattacactgaattatgtgatttt 28918021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 30184109 - 30184145
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  30184109 caccgacacatgtaattacactgaattatgtcatttt 30184145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 34307765 - 34307821
Alignment:
Q  42 gtgtcgtatccgacacc-ac-cgacacatataattacactgaattatgtgattttct 96  Q
    ||||||| ||||||||| || |||||| ||||||||||||||| |||||||||||||    
T  34307765 gtgtcgtgtccgacaccgacacgacacttataattacactgaaatatgtgattttct 34307821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 34910361 - 34910309
Alignment:
Q  70 taattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtc 122  Q
    ||||||||||||||||||||||||| | |||   |||||| ||||||||||||    
T  34910361 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 8930836 - 8930875
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttctaaaa 100  Q
    |||||||||||||||||  ||||||||||||||| |||||    
T  8930836 cgacacatataattacatcgaattatgtgattttttaaaa 8930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 96
Target Start/End: Complemental strand, 11252023 - 11251996
Alignment:
Q  69 ataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||    
T  11252023 ataattacactgaattatgtgattttct 11251996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 11658868 - 11658833
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||| ||||||||||||| ||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttct 11658833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 25347561 - 25347596
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    |||||| |||||||||||||||| ||||||||||||    
T  25347561 cgacacgtataattacactgaatcatgtgattttct 25347596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 6e-29; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 18212982 - 18213137
Alignment:
Q  5 acagacactcctcggataaggtgtgtccccgtgtc----aggtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttct-aaa 99  Q
    ||||||||||||||||||||| |||||||||||||    ||| ||||| |||||   |||||||||||||||||||||| |||||||||||||||| |||    
T  18212982 acagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccga---caccgacacatataattacactaaattatgtgattttctaaaa 18213078  T
Q  100 aaagttagttttgtcggc------gtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    ||| |||||| |||||||      |||||||||||||||||| ||||||||| ||||||    
T  18213079 aaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtctggtgttcgtgttcgtatc 18213137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 1656721 - 1656640
Alignment:
Q  69 ataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    |||||||||||||||||||||||||| ||||||| |||||| |||||  |||||||||||||||| ||| | ||||||| ||||    
T  1656721 ataattacactgaattatgtgattttttaaaaaatttagttgtgtcg--gtgtccgtgtcgtgtccgatatccgtgtccatatc 1656640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 39138500 - 39138451
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttag 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  39138500 caccgacatatataattacactgaattatgtgattttctaaaaaatttag 39138451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 17851483 - 17851445
Alignment:
Q  62 gacacatataattacactgaattatgtgattttctaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17851483 gacacatataattacactgaattatgtgattttctaaaa 17851445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 22602713 - 22602751
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22602713 caccgacacatataattacactgaattatgtgattttct 22602751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 640169 - 640134
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattt 93  Q
    ||||||||||||||||||||||||||||||||||||    
T  640169 caccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 22868094 - 22868027
Alignment:
Q  62 gacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcg 129  Q
    ||||||||||||||||||||||||||||||||||| | |   |||||  |||||||||||| ||||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcg 22868027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 2948739 - 2948697
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaa 100  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaa 2948697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 5835303 - 5835265
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  5835303 caccgacacatataattacactgaattatgttattttct 5835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 9482990 - 9482952
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  9482990 caccgacacatataattacactgaattgtgtgattttct 9482952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 20549847 - 20549809
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  20549847 caccgacacatataattacactgaattacgtgattttct 20549809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 24146872 - 24146830
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaa 100  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  24146872 caccgacacatataattatattgaattatgtgattttctaaaa 24146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 27732243 - 27732280
Alignment:
Q  59 accgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||| |||||||    
T  27732243 accgacacatataattacactgaattatgtaattttct 27732280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 5409783 - 5409875
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacac--caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||| ||| ||||||| ||||| |    ||||||| ||||||||  ||||||||| | ||||| |||||||||||||||||||    
T  5409783 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgatttt 5409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 15902878 - 15902842
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||||| ||||||||||||||    
T  15902878 caccgacacatataattacactaaattatgtgatttt 15902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 6630918 - 6630985
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||||||||||||||||||| |||| ||||| |||   |||||  |||||||||||| |||||    
T  6630918 cgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 12278888 - 12278853
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||| |||||||    
T  12278888 cgacacatataattacactgaattatgtcattttct 12278853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 17307949 - 17307883
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgt 127  Q
    |||| |||||||||||||||||||||||||| ||||||| |||   ||||  ||||||||||||| ||||    
T  17307949 caccaacacatataattacactgaattatgttattttctcaaa---ttagcgttgtcggcgtgtcagtgt 17307883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 3520345 - 3520383
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  3520345 caccgacacatataattacattgaattatatgattttct 3520383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 3721149 - 3721111
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  3721149 caccgacacatataattatactaaattatgtgattttct 3721111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 5548728 - 5548694
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||| |||||||||    
T  5548728 gacacatataattacactgaattatttgattttct 5548694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 7328694 - 7328732
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  7328694 caccgacacatataattacactaaattatgttattttct 7328732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 16341552 - 16341514
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  16341552 caccggcacatataattacacttaattatgtgattttct 16341514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 19206106 - 19206068
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  19206106 caccgacacatataattataatgaattatgtgattttct 19206068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 19992057 - 19992019
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  19992057 caccgacacttataattacactgaaatatgtgattttct 19992019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 22484081 - 22484039
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaa 100  Q
    |||||||||||||||||| |||||||||||  |||||||||||    
T  22484081 caccgacacatataattatactgaattatgcaattttctaaaa 22484039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 23849461 - 23849499
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  23849461 caccgacacatataattatactgaattatgtgtttttct 23849499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 27093416 - 27093454
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  27093416 caccgacgcatataattacactaaattatgtgattttct 27093454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 27184885 - 27184847
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  27184885 caccgacgcatataattacactaaattatgtgattttct 27184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 27945097 - 27945027
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||| | ||||||||||||||||||| ||||||| |||   |||||  |||||||||||| |||||    
T  27945097 caccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtc 27945027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 32287466 - 32287504
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||| || |||||||||||||||||||||    
T  32287466 caccgacacatatacttgcactgaattatgtgattttct 32287504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 32308172 - 32308138
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    |||||||| ||||||||||||||||||||||||||    
T  32308172 gacacatacaattacactgaattatgtgattttct 32308138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 8234186 - 8234113
Alignment:
Q  74 tacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtcc 147  Q
    ||||||||||||||| ||||| | |||   |||||| |||||| ||||| |||||| ||| |||||||||||||    
T  8234186 tacactgaattatgttattttttcaaattattagttgtgtcggtgtgtctgtgtcgggtccgatgttcgtgtcc 8234113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 15680865 - 15680829
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  15680865 caccgacacttataattacactaaattatgtgatttt 15680829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 18013081 - 18013113
Alignment:
Q  62 gacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||||||||||||||||||| |||||    
T  18013081 gacacatataattacactgaattatgtaatttt 18013113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 18039055 - 18039019
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  18039055 caccgacacttgtaattacactgaattatgtgatttt 18039019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 21560559 - 21560523
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  21560559 caccgacacttgtaattacactgaattatgtgatttt 21560523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 24339698 - 24339662
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  24339698 caccgacacttgtaattacactgaattatgtgatttt 24339662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 26329387 - 26329423
Alignment:
Q  60 ccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  26329387 ccgacacatataattacactgaattgtgtgtttttct 26329423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 26733360 - 26733324
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  26733360 caccgacacatttaattagactgaattatgtgatttt 26733324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 32093967 - 32094059
Alignment:
Q  9 acactcctcggataaggtgtgtccccg-tgtcag----gtgtcgtatccgacac--caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||||| ||| ||||||||| |||| |    ||||||| ||||||||  ||||||||  | |||||||||||||||||||||||||    
T  32093967 acactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgtgatttt 32094059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 41020552 - 41020516
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  41020552 caccgacgcatataattacactaaattatgtgatttt 41020516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 96
Target Start/End: Complemental strand, 2424659 - 2424632
Alignment:
Q  69 ataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttct 2424632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 8239056 - 8239091
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||  ||||||||    
T  8239056 cgacacatataattacactgaattataagattttct 8239091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 18233604 - 18233639
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    |||||| ||||||||||||||||||||| |||||||    
T  18233604 cgacacctataattacactgaattatgtcattttct 18233639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 94
Target Start/End: Original strand, 26033465 - 26033500
Alignment:
Q  59 accgacacatataattacactgaattatgtgatttt 94  Q
    |||||||| | |||||||||||||||||||||||||    
T  26033465 accgacacttgtaattacactgaattatgtgatttt 26033500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 96
Target Start/End: Original strand, 29787383 - 29787410
Alignment:
Q  69 ataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||    
T  29787383 ataattacactgaattatgtgattttct 29787410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 6e-29; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 20242676 - 20242800
Alignment:
Q  5 acagacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaa 100  Q
    |||||||||| |||||||||| |||||| ||||||||    |||| || |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  20242676 acagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacacc---gacacatataattacactgaattatgtgattttctaaaa 20242772  T
Q  101 aagttagttttgtcggcgtgtccgtgtc 128  Q
    || |||||| |||||||||||| |||||    
T  20242773 aaattagttgtgtcggcgtgtcagtgtc 20242800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 41843556 - 41843427
Alignment:
Q  5 acagacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacac--caccgacacatataattacactgaattatgtgattttctaa 98  Q
    ||||||||||||||||||| | ||||||||||||| |    ||||||  ||||||||  |||||||||||||||||| || |||||||||||||| ||||    
T  41843556 acagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacacaacaccgacacatataattataccgaattatgtgatttcctaa 41843457  T
Q  99 aaaagttagttttgtcggcgtgtccgtgtc 128  Q
    |||| ||||||||||||||||||| |||||    
T  41843456 aaaatttagttttgtcggcgtgtcagtgtc 41843427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 36096378 - 36096471
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgtat 151  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||| |||| | ||||||||||||||||||||| ||| ||| |||||||||||    
T  36096378 caccgacaaatataattacactgcattttgtgattttctaaaaaatttagctgtgtcggcgtgtccgtgtcgtgcctggtgtccgtgtccgtat 36096471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 34784920 - 34785055
Alignment:
Q  5 acagacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacacc--------accgacacatataattacactgaattatgtgatt 92  Q
    |||||||||||||| |||||| |||||||||||||||    ||||||| ||||| |||        ||||||||||||||||||||| ||||||||||||    
T  34784920 acagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgatt 34785019  T
Q  93 ttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    |||||||||| |||||| |||||| ||||| |||||    
T  34785020 ttctaaaaaaattagttgtgtcggtgtgtcagtgtc 34785055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 24009402 - 24009288
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaag 103  Q
    ||||||||| |||||||| |||||||||||||||    ||||||| |||||||||   |||||||| | |||||||| ||| |||||||||||||||||     
T  24009402 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc---gacacata-atttacactgcattttgtgattttctaaaaaaa 24009307  T
Q  104 ttagttttgtcggcgtgtc 122  Q
    |||| | ||||| ||||||    
T  24009306 ttagctgtgtcgccgtgtc 24009288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 21616813 - 21616748
Alignment:
Q  63 acacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    |||||||||||||||||||||||||||||||||| |||   ||||   ||||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtc 21616748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 20922935 - 20922975
Alignment:
Q  62 gacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  20922935 gacacatataattacactaaattatgtgattttctaaaaaa 20922975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 5367248 - 5367213
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattt 93  Q
    ||||||||||||||||||||||||||||||||||||    
T  5367248 caccgacacatataattacactgaattatgtgattt 5367213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 44860376 - 44860284
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    |||||||||||||||||||||||||||||| |||||||| |||   ||||   ||||   |||||||||||||||||| ||| ||| ||||||||    
T  44860376 caccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc--agtgtccgtgtcgtgtctggtgtacgtatccgtatc 44860284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 18889594 - 18889632
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  18889594 caccgacacatatgattacactgaattatgtgattttct 18889632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 23718082 - 23718044
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  23718082 caccgacacatataattacactgaattatgtgactttct 23718044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 24105754 - 24105716
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  24105754 caccgacacatataattacactgaattatgtgactttct 24105716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 38355890 - 38355928
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  38355890 caccgacacatataatcacactgaattatgtgattttct 38355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 39279731 - 39279693
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  39279731 caccgacacatataattacactgaattatttgattttct 39279693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 2665897 - 2665933
Alignment:
Q  64 cacatataattacactgaattatgtgattttctaaaa 100  Q
    |||||||||||||||| ||||||||||||||||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaa 2665933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 122
Target Start/End: Original strand, 12668426 - 12668490
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtc 122  Q
    ||||||||| ||||||||||||||||||||| ||||| | |||   |||||| ||||||||||||    
T  12668426 caccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtc 12668490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 15909641 - 15909705
Alignment:
Q  64 cacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||||||||||||||||||| ||||||| ||||  |||| | | |||||||||| |||||    
T  15909641 cacatataattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgtc 15909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 28524479 - 28524447
Alignment:
Q  61 cgacacatataattacactgaattatgtgattt 93  Q
    |||||||||||||||||||||||||||||||||    
T  28524479 cgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 31808129 - 31808097
Alignment:
Q  62 gacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||||||||||||||||    
T  31808129 gacacatataattacactgaattatgtgatttt 31808097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 34691808 - 34691844
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||||||||||||||||||||| |||||||    
T  34691808 caccgacacatataattacactgaattatatgatttt 34691844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 34714220 - 34714256
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||||||||||||||||||||| |||||||    
T  34714220 caccgacacatataattacactgaattatatgatttt 34714256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 2438671 - 2438758
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgt----caggtgtcgtatccgacaccaccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||| ||| ||||||| ||||    || ||||||| |||||   ||||||||| | |||||||||||||||||||||||||    
T  2438671 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccga---caccgacacttgtaattacactgaattatgtgatttt 2438758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 37411250 - 37411285
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||| ||||||||||||||||||||||    
T  37411250 cgacacatataatcacactgaattatgtgattttct 37411285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 18276577 - 18276539
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  18276577 caccgacacacataattacactgaattaagtgattttct 18276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 30471093 - 30471051
Alignment:
Q  59 accgacacatataattacactgaattatgtgattttctaaaaa 101  Q
    |||||||||||||||||||  ||||||||||||||||| ||||    
T  30471093 accgacacatataattacatcgaattatgtgattttctcaaaa 30471051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 35056924 - 35056886
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  35056924 caccgacacatataattacactgaattatatggttttct 35056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 35449565 - 35449531
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  35449565 gacacatataattacactgaattctgtgattttct 35449531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 94
Target Start/End: Complemental strand, 28677958 - 28677929
Alignment:
Q  65 acatataattacactgaattatgtgatttt 94  Q
    ||||||||||||||||||||||||||||||    
T  28677958 acatataattacactgaattatgtgatttt 28677929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 30527599 - 30527636
Alignment:
Q  59 accgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  30527599 accgacacatataattacactaaattatatgattttct 30527636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 18054806 - 18054850
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    |||| |||||||||||||||||| | | |||||||||||||||||    
T  18054806 caccaacacatataattacactgcagtttgtgattttctaaaaaa 18054850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 18622662 - 18622626
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||| |||| |||||||||||||||||||||||||||    
T  18622662 caccaacacgtataattacactgaattatgtgatttt 18622626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 19536400 - 19536436
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  19536400 caccgacacttgtaattacactgaattatgtgatttt 19536436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 26769521 - 26769473
Alignment:
Q  104 ttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    |||||| |||||||||||| |||||||||| | ||| ||||||||||||    
T  26769521 ttagttgtgtcggcgtgtctgtgtcgtgtccggtgtccgtgtccgtatc 26769473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 28412407 - 28412370
Alignment:
Q  55 caccaccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  28412407 caccaccgacacata--attacactgaattatgtgatttt 28412370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 1239666 - 1239737
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgt 132  Q
    ||||||||||||||||||   ||||| ||||||||| |||   ||| |  ||||||||||||||||||||||    
T  1239666 cgacacatataattacacatgattatatgattttcttaaattattaatgatgtcggcgtgtccgtgtcgtgt 1239737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 96
Target Start/End: Original strand, 17520080 - 17520111
Alignment:
Q  65 acatataattacactgaattatgtgattttct 96  Q
    |||||| |||||||||||||||||||||||||    
T  17520080 acatatgattacactgaattatgtgattttct 17520111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 96
Target Start/End: Original strand, 21782832 - 21782859
Alignment:
Q  69 ataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||    
T  21782832 ataattacactgaattatgtgattttct 21782859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 36756347 - 36756382
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattt 93  Q
    ||||||||| ||||||||||||||||||||| ||||    
T  36756347 caccgacacttataattacactgaattatgttattt 36756382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 2e-25; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 9 - 133
Target Start/End: Original strand, 5626653 - 5626774
Alignment:
Q  9 acactcctcggataaggtgtgtccccgtgtcaggtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaagttagt 108  Q
    |||||||||||||||||  ||| ||| |  |||||||||| |||||||||   |||||||||| |||||||||| || |||||||||||||||| |||||    
T  5626653 acactcctcggataaggcatgttcccattacaggtgtcgtgtccgacacc---gacacatatatttacactgaactaagtgattttctaaaaaaattagt 5626749  T
Q  109 tttgtcggcgtgtccgtgtcgtgtc 133  Q
    | |||||||||||| ||||||||||    
T  5626750 tgtgtcggcgtgtcagtgtcgtgtc 5626774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 16488593 - 16488684
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgt 149  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |||| | ||||||||||||| |||||| || | ||| |||||||||    
T  16488593 caccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccatgtcgtttccggtgtccgtgtccgt 16488684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 17327602 - 17327719
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacac--caccgacacatataattacactgaattatgtgattttctaaaaa 101  Q
    |||||||||||||| ||| ||||||| |||||||    ||||||| ||||||||  ||| |||||||||| ||||||| |||||||||||||||| ||||    
T  17327602 gacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtgattttctcaaaa 17327701  T
Q  102 agttagttttgtcggcgt 119  Q
      |||||| |||||||||    
T  17327702 tcttagttgtgtcggcgt 17327719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 18367892 - 18367828
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtc 122  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |||| | ||||||||||||    
T  18367892 caccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 18367828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 34595241 - 34595126
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaag 103  Q
    |||||||||||||| ||||||||||| |||||||    ||||||| |||||||||   ||||| | ||||||||||||||||||||||||| | |||       
T  34595241 gacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacc---gacacttgtaattacactgaattatgtgattttttcaaatta 34595145  T
Q  104 ttagttttgtcggcgtgtc 122  Q
    |||||| ||||||||||||    
T  34595144 ttagttgtgtcggcgtgtc 34595126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 12696439 - 12696310
Alignment:
Q  5 acagacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacac--caccgacacatataattacactgaattatgtgattttctaa 98  Q
    |||||||||||| |||||||||||||||| |||||||    ||||||| ||||||||  ||| ||||| | ||||||||||||||||||| ||||| | |    
T  12696439 acagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttca 12696340  T
Q  99 aaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||   |||| | |||||||||||| |||||    
T  12696339 aattattagctgtgtcggcgtgtcagtgtc 12696310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 7265596 - 7265634
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7265596 caccgacacatataattacactgaattatgtgattttct 7265634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 9025497 - 9025535
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9025497 caccgacacatataattacactgaattatgtgattttct 9025535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 26562742 - 26562676
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgt 127  Q
    |||||||||||||||||||||||||||||||||||| |||   ||||   |||||||||||||||||    
T  26562742 cgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 7027298 - 7027262
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  7027298 caccgacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 11591876 - 11591911
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttct 11591911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 32511657 - 32511707
Alignment:
Q  43 tgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||   |||| |||||||||||||||||||||||||||||    
T  32511657 tgtcgtatccgacacca---acacttataattacactgaattatgtgattttct 32511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 7086851 - 7086813
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  7086851 caccgacacatataattacactaaattatgtgattttct 7086813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 7378035 - 7377997
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  7378035 caccgacacatataattacattgaattatgtgattttct 7377997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 9617490 - 9617452
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  9617490 caccgacacatataattacattgaattatgtgattttct 9617452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 9629439 - 9629401
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  9629439 caccgacacatataattacattgaattatgtgattttct 9629401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 9658935 - 9658897
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  9658935 caccgacaaatataattacactgaattatgtgattttct 9658897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 13360375 - 13360413
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  13360375 caccgaaacatataattacactgaattatgtgattttct 13360413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 19040404 - 19040370
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||||    
T  19040404 gacacatataattacactgaattatgtgattttct 19040370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 19044520 - 19044450
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    |||||||||||||||| ||||||||||||||||| |||| |||   |||||  |||||||||||| |||||    
T  19044520 caccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtc 19044450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 4388137 - 4388097
Alignment:
Q  62 gacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  4388137 gacacatataattaccctggattatgtgattttctaaaaaa 4388097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 30866149 - 30866185
Alignment:
Q  60 ccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||| ||||||||||||||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttct 30866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 5732513 - 5732551
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| || |||||||||||||    
T  5732513 caccgacacatataattacactaaaatatgtgattttct 5732551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 7996381 - 7996419
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  7996381 caccgacgcatataattacactgaattatatgattttct 7996419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 8022420 - 8022382
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  8022420 caccgacgcatataattacactgaattatatgattttct 8022382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 9027234 - 9027200
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatt 92  Q
    ||||||||||||||||||||| |||||||||||||    
T  9027234 caccgacacatataattacacggaattatgtgatt 9027200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 9195757 - 9195795
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  9195757 caccgacacatataattacactaaattatgtcattttct 9195795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 10770677 - 10770747
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||| | ||||||||||||||||||||||||| | |||   |||||| ||| |||||||| |||||    
T  10770677 caccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtc 10770747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 13364708 - 13364746
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  13364708 caccgacacatatgattacactgaattatatgattttct 13364746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 16766753 - 16766683
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||| | ||||||||||||||||||||||||| | |||   |||| | |||||||||||| |||||    
T  16766753 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 16766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 16833364 - 16833294
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||| | ||||||||||||| ||||||||||| | |||   |||||| |||||||||||| |||||    
T  16833364 caccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 16833294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 21924938 - 21924976
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  21924938 caccgacacatataattacactgaattatttgatattct 21924976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 28152154 - 28152085
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||| | ||||||||||||||||||||||||| | |||   |||| |||||||||||||| |||||    
T  28152154 caccgacacttgtaattacactgaattatgtgatttt-tcaaattattagctttgtcggcgtgtcagtgtc 28152085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 34073350 - 34073388
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  34073350 caccgacccatataattacactgaattatgagattttct 34073388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 12627583 - 12627616
Alignment:
Q  61 cgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||| |||||||||||||||||||||||    
T  12627583 cgacacatattattacactgaattatgtgatttt 12627616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 1700408 - 1700372
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  1700408 caccgacacttataattacactgaaatatgtgatttt 1700372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 7151468 - 7151432
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  7151468 caccaacacatataattacacttaattatgtgatttt 7151432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 8776963 - 8777046
Alignment:
Q  42 gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||| ||||||||||   |||| | ||||||||||||||| ||||||||| | |||   |||||| |||||||||||| |||||    
T  8776963 gtgtcgtgtccgacacca---acacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 8777046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 8931608 - 8931668
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgt 121  Q
    ||||||||||||||| |||||||||||| ||||||| |||   |||| | |||||||||||    
T  8931608 cgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgt 8931668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 9522947 - 9522911
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  9522947 caccgacacttgtaattacactgaattatgtgatttt 9522911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 17341671 - 17341703
Alignment:
Q  62 gacacatataattacactgaattatgtgatttt 94  Q
    ||||| |||||||||||||||||||||||||||    
T  17341671 gacacttataattacactgaattatgtgatttt 17341703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 26178684 - 26178720
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  26178684 caccgacacatatgattacactaaattatgtgatttt 26178720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 33001292 - 33001328
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||| | ||||||||||||||    
T  33001292 caccgacacatataattacatttaattatgtgatttt 33001328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 7801159 - 7801222
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgt 121  Q
    ||||||||| | ||||||| ||||||||||||||||| | |||   |||||| |||||||||||    
T  7801159 caccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgt 7801222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 9911531 - 9911566
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattt 93  Q
    ||||||||| | ||||||||||||||||||||||||    
T  9911531 caccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 10339132 - 10339167
Alignment:
Q  62 gacacatataatta-cactgaattatgtgattttct 96  Q
    |||||||||||||| |||||||||||||||||||||    
T  10339132 gacacatataattaacactgaattatgtgattttct 10339167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 13851789 - 13851754
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||| || |||||||    
T  13851789 cgacacatataattacactgaattacgttattttct 13851754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 24833243 - 24833310
Alignment:
Q  65 acatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgt 132  Q
    ||||||||||||||| ||||||| |||||||| ||    |||||  |||||||||||| |||||||||    
T  24833243 acatataattacactaaattatgcgattttcttaacttattagtagtgtcggcgtgtcagtgtcgtgt 24833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 96
Target Start/End: Original strand, 31579239 - 31579266
Alignment:
Q  69 ataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||    
T  31579239 ataattacactgaattatgtgattttct 31579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 133
Target Start/End: Original strand, 30098991 - 30099116
Alignment:
Q  9 acactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaagt 104  Q
    |||||||| |||||||| |||||||||||||||    |||||||||||||||||   ||||||||||||||||| |||||||| |||| | ||||||| |    
T  30098991 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacacc---gacacatataattacacagaattatgcgattgtttaaaaaatt 30099087  T
Q  105 tagttttgtcggcgtgtccgtgtcgtgtc 133  Q
    ||||| ||||||||||||  |||||||||    
T  30099088 tagttgtgtcggcgtgtctatgtcgtgtc 30099116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 21814317 - 21814226
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgt 149  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |||| | ||||||||||||| |||||| || | ||| |||||||||    
T  21814317 caccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccatgtcgtttccggtgtccgtgtccgt 21814226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 6401554 - 6401484
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |||||| |||||||||||| |||||    
T  6401554 caccgacacatataattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtc 6401484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 39758327 - 39758279
Alignment:
Q  59 accgacacatataattacactgaattatgtgattttctaaaaaagttag 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39758327 accgacacatataattacactgaattatgtgattttctaaaaaatttag 39758279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 32426872 - 32426921
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttag 107  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  32426872 caccgacacaaataattacaatgaattatgtgattttctaaaaaatttag 32426921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 42029859 - 42029767
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaa 99  Q
    |||||||||||||||||| |||||  |||| |||    ||||||| |||||   |||||| ||||||||||||| |||||||||||||||||||||    
T  42029859 gacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccga---caccgatacatataattacattgaattatgtgattttctaaa 42029767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 41091263 - 41091298
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  41091263 cgacacatataattacactgaattatgtgattttct 41091298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 3966559 - 3966521
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  3966559 caccgacacatataattacactgaattgtgtgattttct 3966521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 6471892 - 6471930
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  6471892 cacccacacatataattacactgaattatgtgattttct 6471930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 28588677 - 28588715
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  28588677 caccgacacctataattacactgaattatgtgattttct 28588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 30502391 - 30502429
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  30502391 caccgacacatataattacactgaattaagtgattttct 30502429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 30542734 - 30542772
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  30542734 caccgacacatataattacactgaattaagtgattttct 30542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 18421846 - 18421882
Alignment:
Q  60 ccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||| |||||||||||||||    
T  18421846 ccgacacatataattacactggattatgtgattttct 18421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 24273039 - 24273071
Alignment:
Q  64 cacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttct 24273071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 24389175 - 24389143
Alignment:
Q  64 cacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttct 24389143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 21576697 - 21576784
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||| ||| ||||||| |||||||    ||||||| |||||   || |||||| | |||||||||||||||||||||||||    
T  21576697 gacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccga---catcgacacttgtaattacactgaattatgtgatttt 21576784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 23015995 - 23016030
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    |||||| |||||||||||||||||||||||||||||    
T  23015995 cgacacctataattacactgaattatgtgattttct 23016030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 31084435 - 31084304
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccac--cgacacatataattacactgaattatgtgattttctaaaaa 101  Q
    |||||||||||||| |||  |||||| ||||| |    ||||||| |||||||| ||  |||||| | |||||||| |||||||||||||||| | |||     
T  31084435 gacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaat 31084336  T
Q  102 agttagttttgtcggcgtgtccgtgtcgtgtc 133  Q
      |||| | |||||||||||| ||||||||||    
T  31084335 tattagctgtgtcggcgtgtcagtgtcgtgtc 31084304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 14873573 - 14873535
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  14873573 caccgacacatataattacactaaattatgtgcttttct 14873535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 16203798 - 16203836
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  16203798 caccgacacatataattacactaaattatgagattttct 16203836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 17593721 - 17593763
Alignment:
Q  54 acaccaccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||    
T  17593721 acaccaccaacatatataattacactgaattacgtgattttct 17593763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 17925175 - 17925213
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  17925175 caccgacacatattattacattgaattatgtgattttct 17925213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 36838599 - 36838561
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  36838599 caccgacacatataattacactaaattatgtaattttct 36838561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 5467984 - 5468017
Alignment:
Q  61 cgacacatataattacactgaattatgtgatttt 94  Q
    |||||| |||||||||||||||||||||||||||    
T  5467984 cgacacctataattacactgaattatgtgatttt 5468017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 6247678 - 6247609
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgt 127  Q
    ||||||||| | ||||||||||||||||||||||||| | |||   |||| | |||||||||||| ||||    
T  6247678 caccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 15884044 - 15884008
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  15884044 caccgacacttgtaattacactgaattatgtgatttt 15884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 21191059 - 21191095
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  21191059 caccgacacttgtaattacactgaattatgtgatttt 21191095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 33178081 - 33178017
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtc 122  Q
    ||||||||| | |||||||||| |||||||||||||| | |||   |||||| ||||||||||||    
T  33178081 caccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtc 33178017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 37328847 - 37328883
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  37328847 caccgacacatgtaattacactgaattttgtgatttt 37328883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 43564937 - 43564901
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  43564937 caccgacacttataattacactaaattatgtgatttt 43564901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 11685995 - 11685920
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtc 133  Q
    |||||||||||||||||||||| ||||||| || ||||| |||   ||||   ||||||| |||| ||||||||||    
T  11685995 caccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtcgtgtc 11685920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 18316952 - 18317015
Alignment:
Q  82 attatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgt 145  Q
    ||||||||||||| |||||   |||||| |||||| || ||||| ||||||||||| |||||||    
T  18316952 attatgtgattttttaaaattattagttgtgtcggtgtatccgtatcgtgtctgatattcgtgt 18317015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 18592129 - 18592086
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaa 101  Q
    ||||| |||||||||||||| |||||||||| ||||||| ||||    
T  18592129 caccggcacatataattacattgaattatgtaattttcttaaaa 18592086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 93
Target Start/End: Complemental strand, 27144515 - 27144484
Alignment:
Q  62 gacacatataattacactgaattatgtgattt 93  Q
    |||||||||||||||||| |||||||||||||    
T  27144515 gacacatataattacactaaattatgtgattt 27144484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 34879403 - 34879368
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||| ||||||||||||||| |||||||||    
T  34879403 cgacacatattattacactgaattatatgattttct 34879368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 1e-20; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 5414113 - 5414245
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacac--------caccgacacatataattacactgaattatgtgattttc 95  Q
    ||||||||| |||||||||||||||| |||||||    ||||||| ||||||||        |||||| |||||||||||||||| ||| ||||||||||    
T  5414113 gacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattttgtgattttc 5414212  T
Q  96 taaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||| |||| | ||||||||||||||||||    
T  5414213 taaaaaaattagctgtgtcggcgtgtccgtgtc 5414245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 40613504 - 40613442
Alignment:
Q  60 ccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtc 122  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||   ||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtc 40613442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 44132647 - 44132691
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||    
T  44132647 caccgacacatataattatactgaattacgtgattttctaaaaaa 44132691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 49431133 - 49431046
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgt----caggtgtcgtatccgacaccaccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||| ||||||| ||||    || ||||||| |||||   ||||||||| | |||||||||||||||||||||||||    
T  49431133 gacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccga---caccgacacttttaattacactgaattatgtgatttt 49431046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 3947713 - 3947862
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacac--caccgacacatataattacactgaattatgtgattttctaaaaa 101  Q
    |||||||||||||| ||||||||||  ||||| |    ||||||| ||||||||  ||| ||||| | |||||||||||||||||| |||||| | |||     
T  3947713 gacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaat 3947812  T
Q  102 agttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
      |||| | ||||||| |||||||||| ||| || ||| ||||||||||||    
T  3947813 tattagctgtgtcggcatgtccgtgtc-tgtgtggtgtccgtgtccgtatc 3947862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 5775361 - 5775399
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  5775361 caccgacacatataattacacttaattatgtgattttct 5775399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 16189765 - 16189727
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16189765 caccgacacacataattacactgaattatgtgattttct 16189727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 36635375 - 36635342
Alignment:
Q  63 acacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||||||||    
T  36635375 acacatataattacactgaattatgtgattttct 36635342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 19097897 - 19097941
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||    
T  19097897 caccgacaaatataattatactgaattacgtgattttctaaaaaa 19097941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 22234893 - 22234929
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||| ||||||||||||||||||||||||    
T  22234893 caccgacacatagaattacactgaattatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 22440609 - 22440641
Alignment:
Q  64 cacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttct 22440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 40179639 - 40179675
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||| |||||||||||||||||||||||||||||    
T  40179639 caccgacgcatataattacactgaattatgtgatttt 40179675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 54580026 - 54580062
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| |||||||||||||||||||||||||||    
T  54580026 caccgacacttataattacactgaattatgtgatttt 54580062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 96
Target Start/End: Complemental strand, 903971 - 903940
Alignment:
Q  65 acatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||||||    
T  903971 acatataattacactgaattatgtgattttct 903940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 13134503 - 13134468
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||| ||||||||||||||||    
T  13134503 cgacacatataattacactaaattatgtgattttct 13134468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 8423721 - 8423759
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  8423721 caccgacatttataattacactgaattatgtgattttct 8423759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 9996896 - 9996858
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  9996896 caccgagacatataattatactgaattatgtgattttct 9996858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 10499277 - 10499311
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||| ||||||||||||||||    
T  10499277 gacacatataattacactaaattatgtgattttct 10499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 12797341 - 12797410
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||| | ||||||||||||||||||||||||| | |||   ||||||||| ||||||||| |||||    
T  12797341 caccgacacttgtaattacactgaattatgtgatttt-tcaaattattagttttgccggcgtgtcagtgtc 12797410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 17344560 - 17344518
Alignment:
Q  54 acaccaccgacacatataattacactgaattatgtgattttct 96  Q
    |||| ||||||||||||||||||| | ||||||||||||||||    
T  17344560 acactaccgacacatataattacattaaattatgtgattttct 17344518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 18576040 - 18576078
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  18576040 caccaacacatataattacaccgaattatgtgattttct 18576078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 30982881 - 30982919
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  30982881 caccgacacttataattacactgaaatatgtgattttct 30982919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 46083994 - 46084036
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaa 100  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  46083994 caccgacacatataattacactagattatgtgatttactaaaa 46084036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 46160952 - 46160914
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  46160952 caccgacacatataataacactgaattatgttattttct 46160914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 12895067 - 12895155
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcaggtgtcgtatccgacac--caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||| ||| || ||| || |||| ||||| |||||||| ||||||||  ||||||||| | |||||||  ||||||||||||||||    
T  12895067 gacactcttcgaattaggcgtatcccggtgtcgggtgtcgtgtccgacacgacaccgacacttgtaattactttgaattatgtgatttt 12895155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 15029821 - 15029788
Alignment:
Q  58 caccgacacatataattacactgaattatgtgat 91  Q
    |||| |||||||||||||||||||||||||||||    
T  15029821 caccaacacatataattacactgaattatgtgat 15029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 26504303 - 26504340
Alignment:
Q  59 accgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  26504303 accgacacatataattacactgaactatttgattttct 26504340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 23292938 - 23293089
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgt----caggtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaag 103  Q
    |||||||||||||| ||| ||||||| ||||    || ||||||| |||||   ||||||||| | |||||| |||||||||||||||||| | |||       
T  23292938 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccga---caccgacacttgtaattatactgaattatgtgattttttcaaatta 23293034  T
Q  104 ttagttttgtcggcg------tgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    |||| | ||||||||      ||||||||||||||| | ||| ||||||||||||    
T  23293035 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatc 23293089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 29205500 - 29205464
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  29205500 caccgacacttgtaattacactgaattatgtgatttt 29205464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 32915610 - 32915650
Alignment:
Q  59 accgacacatataattacactgaattatgtgattttctaaa 99  Q
    ||||| ||||||||||||| |||||||||||||||| ||||    
T  32915610 accgaaacatataattacattgaattatgtgattttttaaa 32915650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 35157988 - 35158024
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  35157988 caccgacacttataattacactaaattatgtgatttt 35158024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 96
Target Start/End: Complemental strand, 35161082 - 35161054
Alignment:
Q  68 tataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||    
T  35161082 tataattacactgaattatgtgattttct 35161054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 42640585 - 42640549
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  42640585 caccgacacttgtaattacactgaattatgtgatttt 42640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 96
Target Start/End: Complemental strand, 7970568 - 7970537
Alignment:
Q  65 acatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| |||||||||    
T  7970568 acatataattacactgaattatatgattttct 7970537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 96
Target Start/End: Original strand, 8402752 - 8402783
Alignment:
Q  65 acatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| |||||||||    
T  8402752 acatataattacactgaattatatgattttct 8402783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 24343560 - 24343525
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    |||||| ||||||||||||||||||||| |||||||    
T  24343560 cgacacctataattacactgaattatgtaattttct 24343525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 6e-20; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 10577687 - 10577808
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaag 103  Q
    ||||||||| |||||||| |||||||||||||||    | ||||| ||||   || ||||||||||||||||||||| ||| |||||||||||||||||     
T  10577687 gacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccg---cccccgacacatataattacactgcattttgtgattttctaaaaaaa 10577783  T
Q  104 ttagttttgtcggcgtgtccgtgtc 128  Q
    |||| | |||||||||||| |||||    
T  10577784 ttagctgtgtcggcgtgtcggtgtc 10577808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 30749896 - 30749852
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30749896 caccgacacatataattacactgaattatgtgattttctaaaaaa 30749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 30771347 - 30771303
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30771347 caccgacacatataattacactgaattatgtgattttctaaaaaa 30771303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 1486653 - 1486748
Alignment:
Q  5 acagacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacac--caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||||||||| ||| ||||||| ||||| |    ||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||    
T  1486653 acagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgatttt 1486748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 25934734 - 25934608
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacacc--------accgacacatataattacactgaattatgtgattttc 95  Q
    ||||||||| |||||||| || ||||||||||||    ||||||| |||||||||        |||||||||||||||||||||| ||| ||||||||||    
T  25934734 gacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattttgtgattttc 25934635  T
Q  96 taaaaaagttagttttgtcggcgtgtc 122  Q
    || |||| |||| | ||||||||||||    
T  25934634 tagaaaatttagctgtgtcggcgtgtc 25934608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 6415004 - 6415099
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgt-cgtgtctgatgttcgtgtccgtatc 152  Q
    ||||||||||| |||||| |||| ||||||||||||||| ||| | ||||   |||||||||||| |||| |||||| | ||||||||||||||||    
T  6415004 caccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtccggtgttcgtgtccgtatc 6415099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 1815313 - 1815243
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||| | ||||||||||||||||||||||||| ||||| | ||| || |||||||||||| |||||    
T  1815313 caccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 1815243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 1864883 - 1864921
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1864883 caccgacacatataattacactgaattatgtgattttct 1864921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 24577189 - 24577263
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgt 132  Q
    ||||||||| | ||||||||||||||||||||||||| | |||   |||||| |||| |||||||||||||||||    
T  24577189 caccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtcgtgt 24577263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 34371769 - 34371731
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34371769 caccgacacatataattacactgaattatgtgattttct 34371731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 44482286 - 44482248
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44482286 caccgacacatataattacactgaattatgtgattttct 44482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 25098563 - 25098648
Alignment:
Q  63 acacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccg 148  Q
    |||||||||||||||||||||||||||||||||| |||   | ||   ||||||| ||||| ||||||||||| ||| ||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtccttgtcgtgtctgttgtccgtgtccg 25098648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 13997939 - 13997903
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  13997939 caccgacacatataattacactgaattatgtgatttt 13997903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 19562567 - 19562662
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacac---caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||| ||||||||||| ||||| |    |||| |||||||||||   |||| |||||||||||||||||||| |||| ||||||||    
T  19562567 gacactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacactgacacctacacatataattacactgaactatgagattttct 19562662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 22881619 - 22881707
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtc 146  Q
    ||||||||| | |||||||||| |||||||||||||| | |||   |||||| |||||||||||| |||||||||| | ||| ||||||    
T  22881619 caccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtc 22881707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 7918218 - 7918252
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||||    
T  7918218 gacacatataattacactgaattatgtgattttct 7918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 10233305 - 10233271
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||||    
T  10233305 gacacatataattacactgaattatgtgattttct 10233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 12919051 - 12918957
Alignment:
Q  9 acactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    ||||| ||||||||||  |||||||||||||||    ||||||| ||||| ||||   ||||||||||| ||| |||||||||||||| |||||||||    
T  12919051 acacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgatacca---acacatataatcacattgaattatgtgattgtctaaaaaa 12918957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 17705592 - 17705626
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttc 95  Q
    |||||||||||||||||||||||||||||||||||    
T  17705592 cgacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 20157353 - 20157391
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  20157353 caccgacacatatgattacactgaattatgtgattttct 20157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 25361938 - 25361904
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||||    
T  25361938 gacacatataattacactgaattatgtgattttct 25361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 36878517 - 36878479
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  36878517 caccgacacctataattacactgaattatgtgattttct 36878479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 39953149 - 39953191
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaa 100  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  39953149 caccgacacatacaattacactaaattatgtgattttctaaaa 39953191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 40181927 - 40181889
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  40181927 caccgatacatataattacactgaattatgtgattttct 40181889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 10572592 - 10572661
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgt 127  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||   |||||  |||||||||||| ||||    
T  10572592 caccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 12443469 - 12443530
Alignment:
Q  64 cacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgt 125  Q
    |||||| |||||||||||||||||||||||||| |||   |||| | |||||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgt 12443530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 5898269 - 5898305
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||| |||||||||||||||||||||||||||||    
T  5898269 caccgacgcatataattacactgaattatgtgatttt 5898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 5944339 - 5944303
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| |||||||||||||||||||||||||||    
T  5944339 caccgacacttataattacactgaattatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 9828100 - 9828064
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9828100 caccgacacataaaattacactgaattatgtgatttt 9828064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 19324612 - 19324580
Alignment:
Q  64 cacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttct 19324580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 52903305 - 52903269
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||||||||||||||||||||| |||||||    
T  52903305 caccgacacatataattacactgaattatatgatttt 52903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 13436514 - 13436479
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattt 93  Q
    |||| |||||||||||||||||||||||||||||||    
T  13436514 caccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 34315767 - 34315704
Alignment:
Q  59 accgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtc 122  Q
    |||||||||||||||||||| |||||||||  |||| ||||||| |||| | ||||||| ||||    
T  34315767 accgacacatataattacaccgaattatgtagttttttaaaaaatttagctgtgtcggcatgtc 34315704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 38075973 - 38076048
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtc 133  Q
    ||||||||||||| |||||||||| ||||||||||| || |||   ||||   ||||| |||||||||||||||||    
T  38075973 caccgacacatatgattacactgacttatgtgatttactcaaattattagcagtgtcgtcgtgtccgtgtcgtgtc 38076048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 45534193 - 45534236
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaa 101  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||    
T  45534193 caccgacatatatacttacactaaattatgtgattttctaaaaa 45534236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 2784612 - 2784574
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  2784612 caccgacacatataattatactcaattatgtgattttct 2784574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 6427406 - 6427368
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  6427406 caccaacacatataattacattgaattatgtgattttct 6427368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 9709876 - 9709838
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  9709876 caccgacacatataattacaacgaattatgtgattttct 9709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 14332645 - 14332683
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  14332645 caccgagacatataattacactaaattatgtgattttct 14332683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 23636052 - 23636090
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  23636052 caccgacacatacaattacactgaattatgtaattttct 23636090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 25272538 - 25272500
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  25272538 caccgacacttataattacactaaattatgtgattttct 25272500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 37598887 - 37598818
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||| ||||||||||||||||| ||||||||| | |||   |||||| |||||||||||| |||||    
T  37598887 caccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 37598818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 38503376 - 38503338
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  38503376 caccgacacatataattacactgaaatatatgattttct 38503338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 39130770 - 39130812
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaa 100  Q
    |||||||||||||||||||||| |||||| | |||||||||||    
T  39130770 caccgacacatataattacactaaattatataattttctaaaa 39130812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 17831537 - 17831606
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgt 130  Q
    |||||||||| |||||||||||| |||||||||||| |||   ||||   |||||||||||| |||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcgt 17831606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 23622370 - 23622297
Alignment:
Q  62 gacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctg 135  Q
    ||||||| |||||||||||| |||||||||||| | |||   |||||  |||||||||||  ||||||||||||    
T  23622370 gacacatttaattacactgagttatgtgatttttttaaactattagtggtgtcggcgtgttagtgtcgtgtctg 23622297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 29163384 - 29163421
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttc 95  Q
    |||||||||||||||||| | |||||||||||||||||    
T  29163384 caccgacacatataattaaattgaattatgtgattttc 29163421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 36906048 - 36906015
Alignment:
Q  63 acacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||| |||||||||||||||||||    
T  36906048 acacatataattactctgaattatgtgattttct 36906015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 398772 - 398804
Alignment:
Q  62 gacacatataattacactgaattatgtgatttt 94  Q
    ||||| |||||||||||||||||||||||||||    
T  398772 gacacctataattacactgaattatgtgatttt 398804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 18337385 - 18337349
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  18337385 caccgacacttgtaattacactgaattatgtgatttt 18337349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 31015097 - 31015061
Alignment:
Q  60 ccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||| | |||||||||||||||||||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttct 31015061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 96
Target Start/End: Complemental strand, 34298482 - 34298454
Alignment:
Q  68 tataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||||    
T  34298482 tataattacactgaattatgtgattttct 34298454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 35919283 - 35919315
Alignment:
Q  62 gacacatataattacactgaattatgtgatttt 94  Q
    ||||| |||||||||||||||||||||||||||    
T  35919283 gacacttataattacactgaattatgtgatttt 35919315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 40258936 - 40258972
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  40258936 caccgacacttgtaattacactgaattatgtgatttt 40258972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 47989553 - 47989517
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  47989553 caccgacacttgtaattacactgaattatgtgatttt 47989517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 48148040 - 48148076
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||| |||||||||||||||||||| |||||||    
T  48148040 caccgacatatataattacactgaattatatgatttt 48148076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 51410081 - 51410045
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  51410081 caccgacacttgtaattacactgaattatgtgatttt 51410045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 96
Target Start/End: Original strand, 12713337 - 12713368
Alignment:
Q  65 acatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||| ||||||||||||||||    
T  12713337 acatataattacactaaattatgtgattttct 12713368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 96
Target Start/End: Original strand, 12717428 - 12717459
Alignment:
Q  65 acatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||| ||||||||||||||||    
T  12717428 acatataattacactaaattatgtgattttct 12717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 94
Target Start/End: Original strand, 17425101 - 17425132
Alignment:
Q  63 acacatataattacactgaattatgtgatttt 94  Q
    ||||||||||||||| ||||||||||||||||    
T  17425101 acacatataattacattgaattatgtgatttt 17425132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 94
Target Start/End: Original strand, 34257914 - 34257949
Alignment:
Q  59 accgacacatataattacactgaattatgtgatttt 94  Q
    ||||||| ||||||||||||| ||||||||||||||    
T  34257914 accgacatatataattacactaaattatgtgatttt 34257949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 38078664 - 38078759
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtg-tcgtgtctgatgttcgtgtccgtatc 152  Q
    ||||||||| | |||||||| |||||||||||||||| | |||   |||| | ||||| |||||| ||| ||||||| | ||| ||||||||||||    
T  38078664 caccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtccgtgtccgtatc 38078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 1e-17; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 13844599 - 13844676
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctg 135  Q
    |||||||||||||||||||||| |||||||||||||||| |||   ||||   |||||||||||||||||||||||||    
T  13844599 caccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtcgtgtctg 13844676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 4786329 - 4786415
Alignment:
Q  43 tgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgt 132  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||   ||| |  |||||||||||| |||||||||    
T  4786329 tgtcgtatccgacacc---gacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtcgtgt 4786415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 14134755 - 14134684
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcg 129  Q
    |||||||| |||||||||||||||||||||||||||||| |||   ||||| |||||| |||||||||||||    
T  14134755 caccgacatatataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgtccgtgtcg 14134684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 18964233 - 18964182
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagtt 109  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  18964233 caccgacacatataattacattgaattatgtgattttctaaaaaaattagtt 18964182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 26902178 - 26902217
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttcta 97  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26902178 caccgacacatataattacactgaattatgtgattttcta 26902217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 11927089 - 11927125
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  11927089 caccgacacatataattacactgaattatgtgatttt 11927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 8847312 - 8847277
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattt 93  Q
    ||||||||||||||||||||||||||||||||||||    
T  8847312 caccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 31236580 - 31236647
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgt 125  Q
    |||||||||||||||||||| |||||||||||||||||| |||   ||||   |||||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccgt 31236647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 34897138 - 34897103
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  34897138 cgacacatataattacactgaattatgtgattttct 34897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 11803315 - 11803277
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  11803315 caccaacacatataattacactgaattatgtgattttct 11803277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 15816132 - 15816202
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||| |||||||||||| |||||||||||||| | |||   |||||| |||||||||||| |||||    
T  15816132 caccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 43737763 - 43737877
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcagg----tgtcgtatccgacaccaccgacacatataattacactgaattatgtgattttctaaaaaag 103  Q
    ||||||||| |||||||| || ||||||||||||     |||||| |||||||||   ||||||||||||||||||| ||| |||||||||| | ||||     
T  43737763 gacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacacc---gacacatataattacactgtattttgtgattttcaagaaaat 43737859  T
Q  104 ttagttttgtcggcgtgt 121  Q
    |||| | || ||||||||    
T  43737860 ttagctgtgccggcgtgt 43737877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 34451040 - 34451089
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttag 107  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||| ||||    
T  34451040 caccgacacatataattacactgcattttgtgattttcaaaaaaaattag 34451089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 3951539 - 3951632
Alignment:
Q  58 caccgacacatataattacactgaattatgtga-ttttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    ||||||||||||||| ||||||| ||| ||||| |||| | ||||| |||| | |||||  ||||||||||||| |||| ||| ||||||||||||    
T  3951539 caccgacacatataagtacactgcattttgtgattttttttaaaaatttagctgtgtcg--gtgtccgtgtcgtatctggtgtccgtgtccgtatc 3951632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 11944721 - 11944685
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    |||||||||||||||||||||||| ||||||||||||    
T  11944721 caccgacacatataattacactgagttatgtgatttt 11944685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 27213601 - 27213565
Alignment:
Q  60 ccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||| ||||||||||||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttct 27213565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 28384997 - 28385032
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattt 93  Q
    |||||||||||||||||||||||||||||| |||||    
T  28384997 caccgacacatataattacactgaattatgagattt 28385032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 34223002 - 34222967
Alignment:
Q  59 accgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||||||||||||||| ||||||||||||||    
T  34223002 accgacacatataattacacttaattatgtgatttt 34222967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 3025603 - 3025569
Alignment:
Q  62 gacacatataattacactgaattatgtgattttct 96  Q
    ||||| |||||||||||||||||||||||||||||    
T  3025603 gacacctataattacactgaattatgtgattttct 3025569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 4611590 - 4611552
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  4611590 caccgagacatataattacactgaattatgttattttct 4611552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 7658519 - 7658481
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  7658519 caccgacaaatataattacactgaattatgtaattttct 7658481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 12606832 - 12606870
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  12606832 caccgacacatataattacattgaattatatgattttct 12606870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 20679398 - 20679436
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  20679398 caccgacacttataattacactgaactatgtgattttct 20679436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 22493550 - 22493508
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaa 100  Q
    |||||||| |||| ||||||||||||||||||||||| |||||    
T  22493550 caccgacatatatgattacactgaattatgtgattttttaaaa 22493508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 92
Target Start/End: Original strand, 24362209 - 24362239
Alignment:
Q  62 gacacatataattacactgaattatgtgatt 92  Q
    |||||||||||||||||||||||||||||||    
T  24362209 gacacatataattacactgaattatgtgatt 24362239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 33382022 - 33382060
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  33382022 caccgacacatataattactctgaattatgtcattttct 33382060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 33405387 - 33405425
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  33405387 caccgacacatataattacactaaattatgtgtttttct 33405425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 39954282 - 39954320
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  39954282 caccgtcacatataattacactaaattatgtgattttct 39954320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 40332247 - 40332209
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  40332247 caccgacacttgtaattacactgaattatgtgattttct 40332209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 8293881 - 8293848
Alignment:
Q  58 caccgacacatataattacactgaattatgtgat 91  Q
    |||||||||||||||||||||||||||| |||||    
T  8293881 caccgacacatataattacactgaattacgtgat 8293848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 14731763 - 14731730
Alignment:
Q  63 acacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||| ||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttct 14731730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 4948708 - 4948672
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  4948708 caccgacacttgtaattacactgaattatgtgatttt 4948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 8343028 - 8342939
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgt 149  Q
    ||||||||| | |||||||||| |||||||||||||| | |||   |||| | |||||  ||||| |||||||||| ||||| |||||||||    
T  8343028 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcg--gtgtcagtgtcgtgtccgatgtccgtgtccgt 8342939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 25566897 - 25566861
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  25566897 caccgacacttgtaattacactgaattatgtgatttt 25566861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 28747438 - 28747482
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    |||||||||||||||||||| |||  ||| |||||||||||||||    
T  28747438 caccgacacatataattacattgagctatctgattttctaaaaaa 28747482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 12570514 - 12570549
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||| ||||||||| ||||||    
T  12570514 cgacacatataattacacttaattatgtgtttttct 12570549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 31580133 - 31580168
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    |||||| |||||||||||| ||||||||||||||||    
T  31580133 cgacacctataattacactcaattatgtgattttct 31580168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 94
Target Start/End: Complemental strand, 36934721 - 36934690
Alignment:
Q  63 acacatataattacactgaattatgtgatttt 94  Q
    ||||||||||||||| ||||||||||||||||    
T  36934721 acacatataattacaatgaattatgtgatttt 36934690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 96
Target Start/End: Original strand, 37283824 - 37283851
Alignment:
Q  69 ataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||    
T  37283824 ataattacactgaattatgtgattttct 37283851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 38079052 - 38079017
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    |||| |||||||||||||||||| ||||||||||||    
T  38079052 cgacgcatataattacactgaatcatgtgattttct 38079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 43; Significance: 9e-16; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 5999 - 6069
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |||| | | |||||||||| |||||    
T  5999 caccgacacatataattacactgcattttgtgattttctaaaaaaattagatgtatcggcgtgtcggtgtc 6069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 43; Significance: 9e-16; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 9954 - 9884
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtc 128  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||| |||| | |||||||||||| |||||    
T  9954 caccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtc 9884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 44529 - 44566
Alignment:
Q  59 accgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44529 accgacacatataattacactgaattatgtgattttct 44566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 13513 - 13386
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacacc---accgacacatataattacactgaattatgtgattttctaaaa 100  Q
    ||||||||| |||| ||||||||||  |||||||    ||||||| |||||||||   |||||| | | ||||| ||||||||||||||||||||| |||    
T  13513 gacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgattttctcaaa 13414  T
Q  101 aagttagttttgtcggcgtgtccgtgtc 128  Q
       |||||| |||||||||||| |||||    
T  13413 ttattagttgtgtcggcgtgtcagtgtc 13386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 21814 - 21941
Alignment:
Q  8 gacactcctcggataaggtgtgtccccgtgtcag----gtgtcgtatccgacacc---accgacacatataattacactgaattatgtgattttctaaaa 100  Q
    ||||||||| |||| ||||||||||  |||||||    ||||||| |||||||||   |||||| | | ||||| ||||||||||||||||||||| |||    
T  21814 gacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgattttctcaaa 21913  T
Q  101 aagttagttttgtcggcgtgtccgtgtc 128  Q
       |||||| |||||||||||| |||||    
T  21914 ttattagttgtgtcggcgtgtcagtgtc 21941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 36; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 23494 - 23440
Alignment:
Q  42 gtgtcgtatccgacac--caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||    
T  23494 gtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgatttt 23440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 23563 - 23531
Alignment:
Q  62 gacacatataattacactgaattatgtgatttt 94  Q
    ||||| |||||||||||||||||||||||||||    
T  23563 gacacttataattacactgaattatgtgatttt 23531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 8054 - 7972
Alignment:
Q  70 taattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtctgatgttcgtgtccgtatc 152  Q
    ||||||||||| ||||| ||||||| | |||   |||||| |||||||||||| || ||||||| ||||||||||| ||||||    
T  8054 taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtctgtatcgtgtccgatgttcgtgttcgtatc 7972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 53236 - 53198
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttct 53198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 9750 - 9788
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  9750 caccgacacatataattacactgaattaagtgattttct 9788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 135315 - 135353
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  135315 caccgacacatataattacacagaattatgtgattttct 135353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 33; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 17826 - 17753
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccgtgtcgtgtc 133  Q
    |||||||||||| |||||||| || || ||||||||||| |||||  ||||| |||||  ||||||||||||||||    
T  17826 caccgacacatacaattacaccgagttgtgtgattttcttaaaaaactagttgtgtcg--gtgtccgtgtcgtgtc 17753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 14574 - 14520
Alignment:
Q  70 taattacactgaattatgtgattttctaaaaaagttagttttgtcggcgtgtccg 124  Q
    ||||||||||||||||||||||||| | |||   |||||| ||||||||||||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtccg 14520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 25771 - 25809
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  25771 caccgacacttataattacactaaattatgtgattttct 25809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 28906 - 28868
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttct 96  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  28906 caccgacacatataattacattgaattatgcgattttct 28868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 99949 - 99907
Alignment:
Q  58 caccgacacatataattacactgaattatgtgattttctaaaa 100  Q
    |||| ||||||||||||||| |||||||||| |||||||||||    
T  99949 caccaacacatataattacattgaattatgttattttctaaaa 99907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 90896 - 90861
Alignment:
Q  61 cgacacatataattacactgaattatgtgattttct 96  Q
    ||||| |||||||||||||||||||| |||||||||    
T  90896 cgacatatataattacactgaattatatgattttct 90861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 15077 - 15045
Alignment:
Q  9 acactcctcggataaggtgtgtccccgtgtcag 41  Q
    ||||||||||||||||| |||||||||||||||    
T  15077 acactcctcggataaggcgtgtccccgtgtcag 15045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 70334 - 70298
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  70334 caccgacacttataattacactgaattatgttatttt 70298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 23826 - 23790
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  23826 caccgacacttgtaattacactgaattatgtgatttt 23790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 130538 - 130502
Alignment:
Q  58 caccgacacatataattacactgaattatgtgatttt 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgatttt 130502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 101052 - 101012
Alignment:
Q  62 gacacatataattacactgaattatgtgattttctaaaaaa 102  Q
    |||||||||||||||| |||||||||| ||||| |||||||    
T  101052 gacacatataattacattgaattatgtcattttttaaaaaa 101012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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