View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4638-Insertion-8 (Length: 470)

Name: NF4638-Insertion-8
Description: NF4638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4638-Insertion-8
NF4638-Insertion-8
[»] chr3 (1 HSPs)
chr3 (8-470)||(40153913-40154375)


Alignment Details
Target: chr3 (Bit Score: 455; Significance: 0; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 8 - 470
Target Start/End: Original strand, 40153913 - 40154375
Alignment:
Q  8 ccaatgtataatcaggttcgaccactttcttcacaaccttcttcctgctccgtaaacgcttcagaaaaggcgagaagaaacaacctgacgaagtcacgca 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40153913 ccaatgtataatcaggttcgaccactttcttcacaaccttcttcctgctccgtaaacgcttcagaaaaggcgagaagaaacaacctgacgaagtcacgca 40154012  T
Q  108 ctctggttgtgcaagaagaggccgttcaaaccgccatcgttcagaaccgaccttaggacttgaccggaaggagcgtgtacggggctccaccggagataac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40154013 ctctggttgtgcaagaagaggccgttcaaaccgccatcgttcagacccgaccttaggacttgaccggaaggagcgtgtacggggctccaccggagataac 40154112  T
Q  208 ttgtaggatccgagttgtggcggaggtttgagcttgaatgagggagattccgggttttgatgatgatggtgaggaatggggagtcctggtttgatttacc 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40154113 ttgtaggatccgagttgtggcggaggtttgagcttgaatgagggagattccgggttttgatgatgatggtgaggaatggggagtcctggtttgatttccc 40154212  T
Q  308 atttgaatggaactgatcctggttttttgaaagaataatcttccgccactaccattgttttgaatttgattgttgcaatatgtgagtggatgcatttatt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40154213 atttgaatggaactgatcctggttttttgaaagaataatcttccgccactaccattgttttgaatttgattgttgcaatatgtgagtggatgcatttatt 40154312  T
Q  408 aacgttgtatatgagttacagtgcttgcgaaatcaaaggcatggattagtggggactcttcag 470  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40154313 aacgttgtatatgagttacagtgcttgcgaaatcaaaggcatggattagtggggactcttcag 40154375  T

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