View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4638-Insertion-9 (Length: 382)
Name: NF4638-Insertion-9
Description: NF4638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4638-Insertion-9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 8 - 382
Target Start/End: Original strand, 20933721 - 20934095
Alignment:
| Q |
8 |
catataccaacataagcagcacccaaatgcttttgaacctaatcttccctctgccatataccaaattaagcaaaccatagatcgagatagaatttctcca |
107 |
Q |
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| T |
20933721 |
catataccaacataagcagcacccaaatgcttttgaaccaaatcttccctctgtcatataccaaattaagcaaaccatagatcgagatagaatttctcca |
20933820 |
T |
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| Q |
108 |
gcaaagtccatatgcagcaaccataacaaccatgtgtttctcattggctacatcaaacggtctttcaaaacaagcattggaaccacttacaataccttcc |
207 |
Q |
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| T |
20933821 |
gcaaagtccatatgcagcaaccataacaaccatgtgtttctcattggctacatcaaacggtctttcaaaacaagcattggaaccacttacaataccttcc |
20933920 |
T |
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| Q |
208 |
atggagaaaatctctatttgaacatctaccaatgaagatactatctctatgtccttattattttctttgatagcaagaactacaaactttttcgtcttta |
307 |
Q |
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| T |
20933921 |
atggagaaaatctctatttgaacatctaccaatgaagatactatctctatttccttattattttctttgatagcaagaactacaaactttttcgtcttta |
20934020 |
T |
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| Q |
308 |
ttgggaggccattgacctttcttttctctttcttattgacccaaaagttcagtgttttccaccccacataagcag |
382 |
Q |
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| T |
20934021 |
ttgggaggccattgacctttcttttctctttcttattgacccaaaagttcagtgttttccaccccacataagcag |
20934095 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 54360971 - 54360890
Alignment:
| Q |
8 |
catataccaacataagcagcacccaaatgcttttgaacctaatcttccctctgccatataccaaattaagcaaaccatagat |
89 |
Q |
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| T |
54360971 |
catataccaacataagcagcacccaaatgcttttgaaccaaatcttccctctgtcatataccaaattaagcaaaccatagat |
54360890 |
T |
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