View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4639-Insertion-8 (Length: 541)

Name: NF4639-Insertion-8
Description: NF4639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4639-Insertion-8
NF4639-Insertion-8
[»] chr7 (42 HSPs)
chr7 (127-541)||(14980665-14981080)
chr7 (127-541)||(15410141-15410556)
chr7 (131-312)||(9724801-9724983)
chr7 (120-312)||(15203049-15203243)
chr7 (115-236)||(8941210-8941333)
chr7 (127-221)||(11085482-11085577)
chr7 (115-236)||(8469278-8469401)
chr7 (115-236)||(14269067-14269190)
chr7 (11-55)||(45846637-45846681)
chr7 (117-236)||(45846750-45846871)
chr7 (13-55)||(8941400-8941442)
chr7 (13-55)||(14268958-14269000)
chr7 (13-55)||(8469477-8469519)
chr7 (210-312)||(16996964-16997064)
chr7 (127-219)||(11091610-11091703)
chr7 (131-236)||(23461632-23461739)
chr7 (132-236)||(9945010-9945116)
chr7 (244-311)||(14036991-14037058)
chr7 (244-311)||(14347021-14347088)
chr7 (180-267)||(32302141-32302227)
chr7 (245-312)||(42462743-42462810)
chr7 (215-312)||(9176919-9177015)
chr7 (231-312)||(11768188-11768269)
chr7 (184-221)||(46579812-46579849)
chr7 (244-312)||(1867344-1867412)
chr7 (245-312)||(130055-130122)
chr7 (132-236)||(5294432-5294538)
chr7 (253-312)||(9032637-9032696)
chr7 (225-312)||(11524892-11524979)
chr7 (215-310)||(13893319-13893414)
chr7 (133-236)||(11973091-11973196)
chr7 (132-255)||(27217684-27217809)
chr7 (132-231)||(8135238-8135338)
chr7 (267-312)||(12902140-12902185)
chr7 (180-236)||(15081212-15081268)
chr7 (180-236)||(21188975-21189031)
chr7 (244-312)||(14045562-14045630)
chr7 (244-312)||(14355592-14355660)
chr7 (269-309)||(16057068-16057108)
chr7 (225-313)||(17016688-17016775)
chr7 (180-255)||(26355244-26355319)
chr7 (180-255)||(26357696-26357771)
[»] chr4 (36 HSPs)
chr4 (132-541)||(26013924-26014336)
chr4 (131-312)||(13591068-13591250)
chr4 (120-312)||(27996662-27996856)
chr4 (120-312)||(19739609-19739803)
chr4 (180-310)||(50160958-50161089)
chr4 (187-312)||(12841436-12841559)
chr4 (115-236)||(52872385-52872508)
chr4 (14-61)||(15489345-15489392)
chr4 (132-221)||(10057623-10057713)
chr4 (115-236)||(12778179-12778303)
chr4 (115-238)||(15489452-15489577)
chr4 (13-55)||(19858539-19858581)
chr4 (215-310)||(40907829-40907925)
chr4 (13-55)||(14745574-14745616)
chr4 (115-236)||(19858348-19858472)
chr4 (231-312)||(14651495-14651576)
chr4 (115-168)||(14745683-14745736)
chr4 (180-312)||(16043829-16043960)
chr4 (131-236)||(14970026-14970133)
chr4 (245-312)||(15792566-15792633)
chr4 (245-312)||(26049733-26049800)
chr4 (13-55)||(52872279-52872321)
chr4 (245-311)||(53081415-53081481)
chr4 (122-255)||(3485791-3485927)
chr4 (132-236)||(363109-363215)
chr4 (245-312)||(14852137-14852204)
chr4 (180-267)||(15011521-15011607)
chr4 (225-312)||(17334072-17334158)
chr4 (132-236)||(18214524-18214630)
chr4 (265-312)||(32852190-32852237)
chr4 (132-255)||(50221552-50221678)
chr4 (13-55)||(12612046-12612087)
chr4 (115-152)||(12611941-12611978)
chr4 (215-312)||(15867954-15868050)
chr4 (180-255)||(25031087-25031163)
chr4 (275-312)||(32306295-32306332)
[»] scaffold0121 (1 HSPs)
scaffold0121 (303-539)||(19883-20119)
[»] chr8 (38 HSPs)
chr8 (131-312)||(37516478-37516660)
chr8 (132-310)||(13660854-13661034)
chr8 (132-310)||(13719497-13719677)
chr8 (120-312)||(19928746-19928939)
chr8 (187-312)||(22385134-22385256)
chr8 (13-55)||(5340841-5340883)
chr8 (13-55)||(11361443-11361485)
chr8 (13-55)||(38549007-38549049)
chr8 (13-55)||(41599165-41599207)
chr8 (115-236)||(11361253-11361376)
chr8 (115-238)||(38549116-38549241)
chr8 (215-312)||(40492112-40492208)
chr8 (215-310)||(2418085-2418179)
chr8 (197-312)||(17085370-17085484)
chr8 (131-221)||(19807393-19807484)
chr8 (215-310)||(21979551-21979646)
chr8 (215-310)||(21999522-21999617)
chr8 (129-236)||(16412632-16412741)
chr8 (133-236)||(20404015-20404120)
chr8 (226-312)||(20532628-20532713)
chr8 (187-312)||(22252372-22252495)
chr8 (115-152)||(41599061-41599098)
chr8 (131-236)||(1326444-1326551)
chr8 (244-312)||(14102462-14102530)
chr8 (218-310)||(21966780-21966872)
chr8 (244-312)||(39834449-39834517)
chr8 (245-312)||(19154125-19154192)
chr8 (132-236)||(20457414-20457520)
chr8 (265-312)||(22365427-22365474)
chr8 (197-312)||(22526281-22526394)
chr8 (132-236)||(32810430-32810536)
chr8 (132-236)||(37609722-37609828)
chr8 (231-312)||(16800231-16800312)
chr8 (184-221)||(22237103-22237140)
chr8 (231-312)||(22984436-22984517)
chr8 (180-236)||(27471787-27471843)
chr8 (245-310)||(28398362-28398427)
chr8 (180-236)||(32122464-32122520)
[»] scaffold0780 (1 HSPs)
scaffold0780 (131-311)||(2470-2652)
[»] chr6 (38 HSPs)
chr6 (132-312)||(22375800-22375981)
chr6 (132-312)||(16966637-16966818)
chr6 (226-312)||(20183590-20183676)
chr6 (226-312)||(22152315-22152401)
chr6 (187-312)||(20137446-20137569)
chr6 (187-312)||(22195300-22195423)
chr6 (224-312)||(18198675-18198763)
chr6 (115-236)||(25721041-25721164)
chr6 (132-221)||(20733244-20733334)
chr6 (176-238)||(27572168-27572230)
chr6 (187-312)||(18697302-18697425)
chr6 (187-312)||(18707053-18707176)
chr6 (115-236)||(17027847-17027970)
chr6 (115-236)||(25689369-25689492)
chr6 (116-236)||(25535951-25536073)
chr6 (187-312)||(17229121-17229243)
chr6 (180-312)||(16246097-16246221)
chr6 (132-312)||(28103448-28103629)
chr6 (115-236)||(18914861-18914983)
chr6 (225-312)||(18230936-18231023)
chr6 (229-312)||(18231342-18231425)
chr6 (13-55)||(17027738-17027780)
chr6 (132-255)||(17882710-17882835)
chr6 (215-310)||(25739194-25739289)
chr6 (132-236)||(31629861-31629967)
chr6 (245-312)||(35011941-35012008)
chr6 (132-221)||(27852168-27852258)
chr6 (129-236)||(34963916-34964025)
chr6 (129-235)||(25753385-25753493)
chr6 (129-235)||(25755555-25755663)
chr6 (132-236)||(16198341-16198447)
chr6 (180-267)||(19772717-19772803)
chr6 (245-312)||(22792541-22792608)
chr6 (218-313)||(23527388-23527482)
chr6 (25-55)||(18915050-18915080)
chr6 (129-236)||(23992965-23993074)
chr6 (231-312)||(23539709-23539790)
chr6 (180-255)||(8055853-8055928)
[»] scaffold0065 (1 HSPs)
scaffold0065 (120-312)||(55811-56006)
[»] scaffold0001 (4 HSPs)
scaffold0001 (120-309)||(498932-499123)
scaffold0001 (245-312)||(447285-447352)
scaffold0001 (245-312)||(498195-498262)
scaffold0001 (132-236)||(501800-501906)
[»] scaffold0331 (1 HSPs)
scaffold0331 (132-312)||(12115-12297)
[»] scaffold0379 (2 HSPs)
scaffold0379 (180-312)||(3943-4076)
scaffold0379 (180-312)||(13937-14070)
[»] scaffold0529 (1 HSPs)
scaffold0529 (132-310)||(4039-4217)
[»] scaffold0338 (1 HSPs)
scaffold0338 (132-310)||(10762-10941)
[»] scaffold0016 (2 HSPs)
scaffold0016 (127-312)||(118750-118934)
scaffold0016 (133-236)||(185005-185110)
[»] scaffold0480 (1 HSPs)
scaffold0480 (197-312)||(10206-10321)
[»] scaffold0877 (1 HSPs)
scaffold0877 (180-312)||(1220-1354)
[»] chr2 (27 HSPs)
chr2 (132-312)||(24792759-24792940)
chr2 (132-312)||(24834023-24834204)
chr2 (115-236)||(23932196-23932319)
chr2 (127-221)||(27473418-27473513)
chr2 (13-55)||(24682362-24682404)
chr2 (132-221)||(34858192-34858282)
chr2 (132-221)||(34873254-34873344)
chr2 (115-236)||(23706329-23706452)
chr2 (13-55)||(23706220-23706262)
chr2 (13-55)||(24671951-24671993)
chr2 (115-236)||(24671761-24671884)
chr2 (245-312)||(18546256-18546323)
chr2 (245-312)||(23005543-23005610)
chr2 (225-312)||(27845429-27845515)
chr2 (132-236)||(45027220-45027326)
chr2 (13-55)||(23932386-23932428)
chr2 (129-236)||(32214247-32214356)
chr2 (133-236)||(41523202-41523306)
chr2 (245-305)||(23792074-23792134)
chr2 (132-236)||(22106201-22106307)
chr2 (245-312)||(23208089-23208156)
chr2 (118-165)||(24682245-24682292)
chr2 (245-312)||(25109661-25109728)
chr2 (197-312)||(26393194-26393308)
chr2 (133-236)||(6726783-6726888)
chr2 (184-221)||(20916269-20916306)
chr2 (244-312)||(22458800-22458868)
[»] chr3 (27 HSPs)
chr3 (180-312)||(14604734-14604864)
chr3 (132-238)||(46752051-46752158)
chr3 (197-312)||(37428486-37428601)
chr3 (131-221)||(6804891-6804982)
chr3 (132-221)||(52988858-52988948)
chr3 (231-312)||(11202093-11202174)
chr3 (115-235)||(20629495-20629617)
chr3 (13-55)||(55318498-55318540)
chr3 (115-236)||(24514219-24514342)
chr3 (187-312)||(324951-325073)
chr3 (13-55)||(24514409-24514451)
chr3 (115-236)||(55318607-55318730)
chr3 (215-310)||(16828365-16828460)
chr3 (132-221)||(14967146-14967236)
chr3 (13-55)||(20629386-20629428)
chr3 (245-310)||(9578419-9578484)
chr3 (264-312)||(23412507-23412555)
chr3 (132-236)||(12119185-12119291)
chr3 (176-207)||(13522247-13522278)
chr3 (245-312)||(15246833-15246900)
chr3 (180-267)||(22758885-22758971)
chr3 (132-255)||(45577655-45577781)
chr3 (133-236)||(13937295-13937400)
chr3 (133-236)||(41124675-41124780)
chr3 (267-312)||(21838246-21838291)
chr3 (223-311)||(22109572-22109659)
chr3 (187-267)||(43888813-43888892)
[»] chr5 (17 HSPs)
chr5 (176-302)||(19616487-19616614)
chr5 (115-236)||(24473810-24473933)
chr5 (115-234)||(29330711-29330832)
chr5 (115-236)||(17516273-17516396)
chr5 (245-312)||(23470563-23470630)
chr5 (197-312)||(26732050-26732164)
chr5 (187-282)||(31062145-31062238)
chr5 (13-55)||(24474000-24474042)
chr5 (246-312)||(25573691-25573757)
chr5 (246-312)||(25574926-25574992)
chr5 (246-312)||(25576119-25576185)
chr5 (131-236)||(2153951-2154058)
chr5 (245-312)||(21327525-21327592)
chr5 (245-312)||(22177459-22177526)
chr5 (197-312)||(26739863-26739977)
chr5 (225-312)||(27988198-27988284)
chr5 (132-255)||(38620258-38620384)
[»] scaffold0054 (1 HSPs)
scaffold0054 (187-312)||(75082-75205)
[»] scaffold1792 (2 HSPs)
scaffold1792 (115-236)||(1094-1217)
scaffold1792 (13-55)||(1285-1327)
[»] scaffold0230 (4 HSPs)
scaffold0230 (115-236)||(22683-22806)
scaffold0230 (115-236)||(20507-20630)
scaffold0230 (13-55)||(22573-22615)
scaffold0230 (13-55)||(20397-20439)
[»] scaffold0074 (2 HSPs)
scaffold0074 (197-312)||(8977-9093)
scaffold0074 (132-221)||(1900-1990)
[»] scaffold0040 (4 HSPs)
scaffold0040 (187-312)||(22989-23112)
scaffold0040 (118-236)||(20580-20700)
scaffold0040 (233-312)||(14133-14212)
scaffold0040 (13-55)||(20770-20812)
[»] scaffold0026 (1 HSPs)
scaffold0026 (131-221)||(22138-22229)
[»] scaffold0395 (1 HSPs)
scaffold0395 (132-221)||(11851-11941)
[»] chr1 (20 HSPs)
chr1 (187-312)||(20958900-20959024)
chr1 (115-236)||(16274556-16274679)
chr1 (187-312)||(16381906-16382030)
chr1 (132-221)||(21995664-21995754)
chr1 (13-55)||(25262106-25262148)
chr1 (13-55)||(37524639-37524681)
chr1 (13-55)||(42314625-42314667)
chr1 (13-55)||(43543619-43543661)
chr1 (231-312)||(21683768-21683849)
chr1 (245-312)||(27652504-27652571)
chr1 (187-310)||(48521285-48521406)
chr1 (187-312)||(21042562-21042685)
chr1 (13-55)||(34770744-34770786)
chr1 (115-168)||(34770624-34770677)
chr1 (115-168)||(43543509-43543562)
chr1 (225-312)||(22777235-22777321)
chr1 (115-168)||(42314734-42314787)
chr1 (215-312)||(16093105-16093201)
chr1 (271-312)||(21857228-21857269)
chr1 (267-312)||(35260416-35260461)
[»] scaffold0151 (2 HSPs)
scaffold0151 (118-236)||(36585-36705)
scaffold0151 (132-307)||(30984-31160)
[»] scaffold0091 (1 HSPs)
scaffold0091 (187-312)||(31693-31815)
[»] scaffold0711 (2 HSPs)
scaffold0711 (115-236)||(6880-7003)
scaffold0711 (13-56)||(6771-6814)
[»] scaffold0322 (2 HSPs)
scaffold0322 (115-236)||(18673-18796)
scaffold0322 (13-55)||(18863-18905)
[»] scaffold0317 (2 HSPs)
scaffold0317 (115-236)||(6240-6363)
scaffold0317 (13-55)||(6131-6173)
[»] scaffold0306 (2 HSPs)
scaffold0306 (115-236)||(10643-10766)
scaffold0306 (13-55)||(10534-10576)
[»] scaffold0043 (2 HSPs)
scaffold0043 (115-236)||(10720-10843)
scaffold0043 (13-61)||(10903-10952)
[»] scaffold0035 (4 HSPs)
scaffold0035 (115-236)||(107211-107334)
scaffold0035 (13-55)||(107401-107443)
scaffold0035 (13-55)||(115902-115944)
scaffold0035 (115-168)||(115782-115835)
[»] scaffold0019 (1 HSPs)
scaffold0019 (115-236)||(21908-22031)
[»] scaffold0169 (1 HSPs)
scaffold0169 (197-312)||(28762-28875)
[»] scaffold0747 (2 HSPs)
scaffold0747 (13-55)||(1634-1676)
scaffold0747 (115-168)||(1514-1567)
[»] scaffold0153 (2 HSPs)
scaffold0153 (132-221)||(5259-5349)
scaffold0153 (132-221)||(12279-12369)
[»] scaffold0009 (2 HSPs)
scaffold0009 (187-312)||(191855-191978)
scaffold0009 (244-312)||(86332-86400)
[»] scaffold0359 (1 HSPs)
scaffold0359 (188-312)||(16204-16327)
[»] scaffold0046 (2 HSPs)
scaffold0046 (223-312)||(25365-25453)
scaffold0046 (223-312)||(16178-16266)
[»] scaffold0032 (1 HSPs)
scaffold0032 (129-221)||(68259-68352)
[»] scaffold0716 (2 HSPs)
scaffold0716 (231-307)||(1938-2014)
scaffold0716 (129-236)||(5430-5539)
[»] scaffold0021 (2 HSPs)
scaffold0021 (115-236)||(562-685)
scaffold0021 (13-55)||(752-795)
[»] scaffold1419 (1 HSPs)
scaffold1419 (187-312)||(828-951)
[»] scaffold0853 (1 HSPs)
scaffold0853 (197-312)||(18-131)
[»] scaffold0357 (2 HSPs)
scaffold0357 (187-312)||(4737-4860)
scaffold0357 (245-312)||(13943-14010)
[»] scaffold0180 (1 HSPs)
scaffold0180 (187-312)||(33726-33849)
[»] scaffold0014 (1 HSPs)
scaffold0014 (197-312)||(203607-203721)
[»] scaffold1296 (1 HSPs)
scaffold1296 (115-165)||(2063-2113)
[»] scaffold0839 (2 HSPs)
scaffold0839 (13-55)||(1155-1197)
scaffold0839 (115-151)||(1264-1300)
[»] scaffold0601 (2 HSPs)
scaffold0601 (13-55)||(70-112)
scaffold0601 (115-152)||(179-216)
[»] scaffold0023 (1 HSPs)
scaffold0023 (129-236)||(16757-16866)
[»] scaffold0012 (1 HSPs)
scaffold0012 (200-312)||(220401-220512)
[»] scaffold0005 (2 HSPs)
scaffold0005 (231-312)||(165716-165797)
scaffold0005 (267-312)||(268442-268487)
[»] scaffold0535 (1 HSPs)
scaffold0535 (131-236)||(7520-7627)
[»] scaffold0010 (1 HSPs)
scaffold0010 (187-312)||(1429-1552)
[»] scaffold0494 (1 HSPs)
scaffold0494 (130-236)||(34-142)
[»] scaffold0174 (1 HSPs)
scaffold0174 (184-221)||(13599-13636)
[»] scaffold0073 (1 HSPs)
scaffold0073 (231-312)||(57661-57742)
[»] scaffold0439 (1 HSPs)
scaffold0439 (176-231)||(12345-12401)
[»] scaffold0235 (1 HSPs)
scaffold0235 (252-312)||(14378-14438)
[»] scaffold0149 (1 HSPs)
scaffold0149 (131-236)||(34232-34339)
[»] scaffold0015 (1 HSPs)
scaffold0015 (218-310)||(209741-209833)
[»] scaffold1835 (1 HSPs)
scaffold1835 (245-312)||(79-146)
[»] scaffold0574 (1 HSPs)
scaffold0574 (132-236)||(7187-7293)
[»] scaffold0417 (1 HSPs)
scaffold0417 (245-312)||(401-468)
[»] scaffold0347 (1 HSPs)
scaffold0347 (245-312)||(9672-9739)
[»] scaffold0282 (1 HSPs)
scaffold0282 (245-312)||(17448-17515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (265-312)||(17601-17648)
[»] scaffold0254 (1 HSPs)
scaffold0254 (132-255)||(21573-21699)
[»] scaffold0145 (1 HSPs)
scaffold0145 (186-221)||(10698-10733)
[»] scaffold0098 (1 HSPs)
scaffold0098 (265-312)||(29500-29547)
[»] scaffold0034 (1 HSPs)
scaffold0034 (180-267)||(120869-120955)
[»] scaffold0028 (1 HSPs)
scaffold0028 (251-306)||(3173-3228)
[»] scaffold0123 (1 HSPs)
scaffold0123 (215-312)||(25871-25966)
[»] scaffold0011 (2 HSPs)
scaffold0011 (180-262)||(126711-126792)
scaffold0011 (231-312)||(37381-37462)
[»] scaffold0686 (2 HSPs)
scaffold0686 (187-305)||(2058-2175)
scaffold0686 (189-221)||(1401-1433)
[»] scaffold0621 (1 HSPs)
scaffold0621 (223-312)||(9283-9371)
[»] scaffold0319 (1 HSPs)
scaffold0319 (180-236)||(6057-6113)
[»] scaffold0278 (1 HSPs)
scaffold0278 (180-236)||(8668-8724)
[»] scaffold0072 (2 HSPs)
scaffold0072 (243-312)||(58608-58677)
scaffold0072 (244-312)||(62441-62509)
[»] scaffold0022 (1 HSPs)
scaffold0022 (215-312)||(128182-128277)
[»] scaffold0003 (1 HSPs)
scaffold0003 (115-152)||(160279-160316)
[»] scaffold1403 (1 HSPs)
scaffold1403 (245-313)||(1311-1379)


Alignment Details
Target: chr7 (Bit Score: 328; Significance: 0; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 127 - 541
Target Start/End: Original strand, 14980665 - 14981080
Alignment:
Q  127 tttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattttaga 225  Q
    |||||||||||||| ||| ||||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14980665 tttcttaaggtaagggtgggactaaccttcaataatcttgagtatgtgattctgaaattgaatttaacatggttgtaggttgagtttttaggattttaga 14980764  T
Q  226 attagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatccgatgaattaggtt 325  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  14980765 attagggttaaaagtgaagaattgatgattagatgatagaaaactgttgaattgatgttgaaactgtgtacagaccttatataatctgatgaattaggtt 14980864  T
Q  326 aataaatttatgttaaatccgtgctctaatttgctgctgtgattttgtctctaaattcgttgtttttatgaactcggattcgtcttatttataattctgc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| |    
T  14980865 aataaatttatgttaaatccgtgctctaatttgctgctgtgattttgtctctaaattcattgtttttatgaactcaaattcgtcttatttataattctac 14980964  T
Q  426 tgcaattgtatgtatgaaatcgataactctgctggttaatactcatcgtaacaacttgtacatagtcttgaatttttgttttatttggttcaacagtgga 525  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  14980965 tgcaattgtacgtatgaaatcgataactctgttggttaatactcatcgtaacaacttgtacatagtcttgaatttttgttttatttggttcatccgtgga 14981064  T
Q  526 tccattaatagggtca 541  Q
    ||||||||||||||||    
T  14981065 tccattaatagggtca 14981080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 127 - 541
Target Start/End: Original strand, 15410141 - 15410556
Alignment:
Q  127 tttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattttaga 225  Q
    |||||||||||||| ||| ||||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15410141 tttcttaaggtaagggtgggactaaccttcaataatcttgagtatgtgattctgaaattgaatttaacatggttgtaggttgagtttttaggattttaga 15410240  T
Q  226 attagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatccgatgaattaggtt 325  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  15410241 attagggttaaaagtgaagaattgatgattagatgatagaaaactgttgaattgatgttgaaactgtgtacagaccttatataatctgatgaattaggtt 15410340  T
Q  326 aataaatttatgttaaatccgtgctctaatttgctgctgtgattttgtctctaaattcgttgtttttatgaactcggattcgtcttatttataattctgc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| |    
T  15410341 aataaatttatgttaaatccgtgctctaatttgctgctgtgattttgtctctaaattcattgtttttatgaactcaaattcgtcttatttataattctac 15410440  T
Q  426 tgcaattgtatgtatgaaatcgataactctgctggttaatactcatcgtaacaacttgtacatagtcttgaatttttgttttatttggttcaacagtgga 525  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  15410441 tgcaattgtacgtatgaaatcgataactctgttggttaatactcatcgtaacaacttgtacatagtcttgaatttttgttttatttggttcatccgtgga 15410540  T
Q  526 tccattaatagggtca 541  Q
    ||||||||||||||||    
T  15410541 tccattaatagggtca 15410556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 131 - 312
Target Start/End: Original strand, 9724801 - 9724983
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaatta 229  Q
    |||||||||| ||| |||||||||  |||||||||||| | |||| ||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  9724801 ttaaggtaagggtgggactaaccttaaataatcttgagtatgtgaatctgatattgaatttaacatggttgtatgttgaggttttagaatttgagaatta 9724900  T
Q  230 gggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||| | ||||||  ||||||||||||| |||||| |||||||    
T  9724901 gggttaaaagtgaggaattgatgattagatgatagaaaactgttgagttgatggagaaactgtgtacataccttatataatcc 9724983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 120 - 312
Target Start/End: Complemental strand, 15203243 - 15203049
Alignment:
Q  120 caatcgatt-tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttaga 217  Q
    ||||||||| || ||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||| ||||||||||||||||||||||||   |||||||    
T  15203243 caatcgattatcctaaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaaaatgaatttaacatggttgtaggttgtagttttaga 15203144  T
Q  218 attttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||  |||||| |||||||| ||| ||||||| ||||||||||| ||||| |||| ||||||||| ||||||||||||| ||||||||||||||    
T  15203143 atttgggaattacggttaaaagtgatgaattgaggattagatgatggaaaactgttgaattgatgtagaaactgtgtacagaccttagataatcc 15203049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 8941333 - 8941210
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  8941333 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 8941235  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  8941234 ttgagaatttgagaattagggttaa 8941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 11085577 - 11085482
Alignment:
Q  127 tttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||||||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||  |||||||||||||||||||||||||| |||||||||||    
T  11085577 tttcttaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaattt 11085482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 8469401 - 8469278
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | ||||||| |||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  8469401 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataattttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 8469303  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  8469302 ttgagaatttgagaattagggttaa 8469278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 14269067 - 14269190
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| | |||||||| |||||    
T  14269067 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gctgtaggtttagttt 14269165  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  14269166 ttgagaatttgagaattagggttaa 14269190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 45846637 - 45846681
Alignment:
Q  11 gattaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45846637 gattaaggttataaaaagagaaaagtgagaagtcagaatagtttt 45846681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 45846750 - 45846871
Alignment:
Q  117 ttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgatct--gaaattgaatttaacatggttgtaggttgagttttt 214  Q
    |||||||||||||||||||||||| ||| ||||||| | |||||||||||||    |||| |   |||||| ||||||||| |||||||||| |||||||    
T  45846750 ttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctctgattttgaaaattgtatttaacat-gttgtaggtttagttttt 45846848  T
Q  215 -agaattttagaattagggttaa 236  Q
     ||||||| ||||||||||||||    
T  45846849 gagaatttgagaattagggttaa 45846871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 8941442 - 8941400
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8941442 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 8941400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 14268958 - 14269000
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14268958 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 14269000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 8469519 - 8469477
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  8469519 ttaaggttataaaaagagaaaagtgagaagttagaatagtttt 8469477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 16997064 - 16996964
Alignment:
Q  210 tttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataa 309  Q
    ||||||||||| || |||||||||||| | |||  |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| |||||||||||    
T  16997064 tttttagaattgta-aattagggttaagagtgat-aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataa 16996967  T
Q  310 tcc 312  Q
    |||    
T  16996966 tcc 16996964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 11091703 - 11091610
Alignment:
Q  127 tttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgatc-tgaaattgaatttaacatggttgtaggttgagtttttagaat 219  Q
    |||||||||||||| ||| ||||||||| ||| |||  |||| | |||||  ||||  |||||||||||||||||||||||||| |||||||||    
T  11091703 tttcttaaggtaagggtgggactaaccttcaacaattctgagtatgtgattatgaagatgaatttaacatggttgtaggttgaggttttagaat 11091610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 23461632 - 23461739
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaat 227  Q
    |||||||||| ||||||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||||    
T  23461632 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaat 23461730  T
Q  228 tagggttaa 236  Q
    |||||||||    
T  23461731 tagggttaa 23461739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 9945010 - 9945116
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||||||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  9945010 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 9945108  T
Q  229 agggttaa 236  Q
    ||||||||    
T  9945109 agggttaa 9945116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 14037058 - 14036991
Alignment:
Q  244 gaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatc 311  Q
    |||||||||||||  ||||  |||||||||| |||||||| |||||||| |||| |||||||||||||    
T  14037058 gaattgatgattaattgatgaaaaattgttagattgatgtagaaactgtttacagaccttagataatc 14036991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 14347088 - 14347021
Alignment:
Q  244 gaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatc 311  Q
    |||||||||||||  ||||  |||||||||| |||||||| |||||||| |||| |||||||||||||    
T  14347088 gaattgatgattaattgatgaaaaattgttagattgatgtagaaactgtttacagaccttagataatc 14347021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 32302227 - 32302141
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaa 267  Q
    |||||| |||||||||| ||||||||| |||||| || ||||  ||||||||||||||| ||| |||||| |||||| ||||| ||||    
T  32302227 aaattgtatttaacatg-ttgtaggtttagttttgaggatttgggaattagggttaaaagtgatgaattgttgattatatgattgaaa 32302141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 42462810 - 42462743
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  |||||||||||||| |||||| | ||||||||||||||    
T  42462810 aattgaggattagatgatggaaacttgtagaattgatgttgaaagtgtgtatagaccttagataatcc 42462743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 9176919 - 9177015
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||| || ||||||||||| | ||| |||||||||||||  ||||  ||| |||||| |||||||| ||||||||||||| ||| |||| |||||    
T  9176919 agaatttgaggattagggttaagagtga-gaattgatgattaattgatgaaaatttgttagattgatgtagaaactgtgtacagaccctagacaatcc 9177015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 11768188 - 11768269
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||  |||||| ||||||||||| |||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  11768188 ggttaaaagtgatcaattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtttacagaccttagataatcc 11768269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 46579812 - 46579849
Alignment:
Q  184 tgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||||||||||||||||||||||||| |||||||||||    
T  46579812 tgaatttaacatggttgtaggttgagattttagaattt 46579849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 1867344 - 1867412
Alignment:
Q  244 gaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||  ||||  |||| ||||| |||||||| |||||||| |||| ||||||||||||||    
T  1867344 gaattgatgattaattgatgaaaaagtgttagattgatgtagaaactgtttacagaccttagataatcc 1867412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 130055 - 130122
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| ||| ||||||||||    
T  130055 aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccatagataatcc 130122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 5294432 - 5294538
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  5294432 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 5294530  T
Q  229 agggttaa 236  Q
    ||||||||    
T  5294531 agggttaa 5294538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 9032637 - 9032696
Alignment:
Q  253 attagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  9032637 attagatgatagaaacttgtagaattgatgtagaaagtgtatacataccttagataatcc 9032696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 11524892 - 11524979
Alignment:
Q  225 aattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||| || |||  |||||| |||| |||||| |||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  11524892 aattagggttataagtgatcaattgaggatttgatgatggaaatttgtagaattgatgtagaaagtgtttacataccttagataatcc 11524979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 13893414 - 13893319
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    ||||||| |||||| ||||| ||| |||  | |||||||||||||| | ||||  |||| || | |||| ||||||||||||| ||||||||||||    
T  13893414 agaatttgagaatttgggttgaaagtgataatttgatgattagatggtggaaacgtgttgaagtaatgtagaaactgtgtacataccttagataat 13893319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 11973196 - 11973091
Alignment:
Q  133 aaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatta 229  Q
    |||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||||||    
T  11973196 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatta 11973098  T
Q  230 gggttaa 236  Q
    |||||||    
T  11973097 gggttaa 11973091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 27217809 - 27217684
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||| ||||||| | |||||||||| ||  | |||| |||||| ||| |||||||||| ||||||||| ||||||| |||||||  |||||    
T  27217809 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatg-ttgtaggtttagtttttgagaatttgggaatt 27217711  T
Q  229 agggttaaaaatgaagaattgatgatt 255  Q
    |||||||||| |||  | |||||||||    
T  27217710 agggttaaaagtgattatttgatgatt 27217684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 8135238 - 8135338
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttg-agtttttagaattttagaatta 229  Q
    ||||||||| ||||||||||||| || ||||| | ||    |||| |||||||||||||||||| |||||||||||| ||||||  |||||| |||||||    
T  8135238 taaggtaagggtgagactaaccttcactaatcctaagtgtatgattctgaaattgaatttaaca-ggttgtaggttgtagttttaggaatttgagaatta 8135336  T
Q  230 gg 231  Q
    ||    
T  8135337 gg 8135338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 12902185 - 12902140
Alignment:
Q  267 aattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||||||| |||||||| |||| ||||||||||||||    
T  12902185 aattgttagattgatgtagaaactgtttacagaccttagataatcc 12902140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 15081212 - 15081268
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagttttt-agaattttagaattagggttaa 236  Q
    |||||| |||||||||| ||||||||| ||||||| ||||||| ||||||||||||||    
T  15081212 aaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaattagggttaa 15081268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 21188975 - 21189031
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttt-tagaattttagaattagggttaa 236  Q
    |||||| |||||||||| ||||||||| |||||| |||||||| ||||||||||||||    
T  21188975 aaattgtatttaacatg-ttgtaggtttagttttttagaatttgagaattagggttaa 21189031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 14045630 - 14045562
Alignment:
Q  244 gaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||  ||||  ||||||||||  ||||||| |||||||| |||| ||||| ||||||||    
T  14045630 gaattgatgattaattgatgaaaaattgttaggttgatgtagaaactgtttacagaccttggataatcc 14045562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 14355660 - 14355592
Alignment:
Q  244 gaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||  ||||  ||||||||||  ||||||| |||||||| |||| ||||| ||||||||    
T  14355660 gaattgatgattaattgatgaaaaattgttaggttgatgtagaaactgtttacagaccttggataatcc 14355592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 16057108 - 16057068
Alignment:
Q  269 ttgttaaattgatgttgaaactgtgtacaaaccttagataa 309  Q
    ||||||||||||||| |||||||| |||| |||||||||||    
T  16057108 ttgttaaattgatgtagaaactgtttacagaccttagataa 16057068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 17016688 - 17016775
Alignment:
Q  225 aattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatccg 313  Q
    |||||||||||| | ||| ||||||||| |||||||||  | ||| ||  ||||||||| |||| ||| |||| |||||||||||||||    
T  17016688 aattagggttaagagtga-gaattgatggttagatgatgtagaatggtagaattgatgtagaaagtgtttacagaccttagataatccg 17016775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 26355244 - 26355319
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgatt 255  Q
    |||||| |||||||||| ||||||||| ||||||| |||||||  ||||||||||||||| |||  | |||||||||    
T  26355244 aaattgtatttaacatg-ttgtaggtttagtttttgagaatttgggaattagggttaaaagtgattatttgatgatt 26355319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 26357696 - 26357771
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgatt 255  Q
    |||||| |||||||||| ||||||||| ||||||| |||||||  ||||||||||||||| |||  | |||||||||    
T  26357696 aaattgtatttaacatg-ttgtaggtttagtttttgagaatttgggaattagggttaaaagtgattatttgatgatt 26357771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 302; Significance: 1e-170; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 132 - 541
Target Start/End: Complemental strand, 26014336 - 26013924
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgatct-gaaattgaatttaacatggttgtaggttgagtttttagaattttagaattag 230  Q
    ||||||||| ||| ||||||||| ||||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  26014336 taaggtaagggtgggactaaccttcaataatcttgagtatgtgattttgaaattgaatttaacatggttgtaggttgagtttttaggatttgagaattag 26014237  T
Q  231 ggttaaaaatgaagaattgatgattagatgataga--aaattgttaaattgatgttgaaactgtgtacaaaccttagataatccgatgaattaggttaat 328  Q
    |||||||| |||||||||||||||| |||||||||  ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26014236 ggttaaaagtgaagaattgatgattggatgatagagaaaactgttgaattgatgttgaaactgtgtacagaccttagataatccgatgaattaggttaat 26014137  T
Q  329 aaatttatgttaaatccgtgctctaatttgctgctgtgattttgtctctaaattcgttgtttttatgaactcggattcgtcttatttataattctgctgc 428  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  26014136 aaatttatgttaaatccgtactgtaatttgctgctgtgattttgtctctaaattcattgtttttatgaactcgaattcgtcttatttataattttgctgc 26014037  T
Q  429 aattgtatgtatgaaatcgataactctgctggttaatactcatcgtaacaacttgtacatagtcttgaatttttgttttatttggttcaacagtggatcc 528  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  26014036 aattgtacgtatgaaatcgataactctgttggttaatactcatcgtaacaacttgtacataatcttgaatttttgttttatttggttcatccgtggatcc 26013937  T
Q  529 attaatagggtca 541  Q
    |||||||||||||    
T  26013936 attaatagggtca 26013924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 131 - 312
Target Start/End: Original strand, 13591068 - 13591250
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaatta 229  Q
    |||||||||| ||| |||||||||  |||||||||||| | |||| ||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  13591068 ttaaggtaagggtgggactaaccttaaataatcttgagtatgtgaatctgatattgaatttaacatggttgtatgttgaggttttagaatttgagaatta 13591167  T
Q  230 gggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||| | ||||||  ||||||||||||| |||||| |||||||    
T  13591168 gggttaaaagtgaggaattgatgattagatgatagaaaactgttgagttgatggagaaactgtgtacataccttatataatcc 13591250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 120 - 312
Target Start/End: Complemental strand, 27996856 - 27996662
Alignment:
Q  120 caatcgatt-tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttaga 217  Q
    ||||||||| || ||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||| |||||||||||||||||||| |||   |||||||    
T  27996856 caatcgattatcctaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaaatgaatttaacatggttgtagattgtagttttaga 27996757  T
Q  218 attttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||  ||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||| |||| |||| |||||||| ||||||||||||||    
T  27996756 atttgggaattagggttaaaagtgatgaattgatgattagatgatggaaaactgttaaattaatgtagaaattgtgtacagaccttagataatcc 27996662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 120 - 312
Target Start/End: Complemental strand, 19739803 - 19739609
Alignment:
Q  120 caatcgatt-tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgatc-tgaaattgaatttaacatggttgtaggttgagtttttaga 217  Q
    ||||||||| || ||||||||| ||||||||||||| |||||||  |||| | |||||  ||||  ||||||||||| ||||||||||||   |||||||    
T  19739803 caatcgattatcctaaggtaagggtgagactaaccttcaataattctgagtatgtgattatgaatatgaatttaacacggttgtaggttgtagttttaga 19739704  T
Q  218 attttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||  ||||||||||||||| ||| ||||||||||||||||| | |||||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  19739703 atttgggaattagggttaaaagtgatgaattgatgattagatgttggaaaattgttgaattgatgtagaaactgtgtacagaccttaggtaatcc 19739609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 50161089 - 50160958
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatga-tagaaaattgttaaatt 278  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||||||||||  |  |||||||| ||||    
T  50161089 aaattgaattttacatggttgtaggttgagtttttagaatttgagaattagggttaaaagtgaggatttgatgattagatgaggaataaattgttgaatt 50160990  T
Q  279 gatgttgaaactgtgtacaaaccttagataat 310  Q
    ||||| |||||| |||||| ||||||||||||    
T  50160989 gatgtagaaactatgtacagaccttagataat 50160958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 12841559 - 12841436
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    |||||||||| ||| ||||| |||||| ||||||  ||||||||| |||||| ||| |||||||||||||||||||  |||| |||||||||||||| ||    
T  12841559 atttaacatg-ttggaggtttagttttgagaattggagaattagg-ttaaaagtgaggaattgatgattagatgatgaaaaagtgttaaattgatgtaga 12841462  T
Q  287 aactgtgtacaaaccttagataatcc 312  Q
    || ||| |||| || |||||||||||    
T  12841461 aagtgtttacagacattagataatcc 12841436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 52872385 - 52872508
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| || |||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  52872385 ccttgcaatcgatttcttaaggtaagggtgggattaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 52872483  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  52872484 ttgagaatttgagaattagggttaa 52872508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 15489345 - 15489392
Alignment:
Q  14 taaggttataaaaagagaaaagtgagaagtcagaatagttttcacgta 61  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15489345 taaggttataaaaagagaaaagtaagaagtcagaatagttttcacgta 15489392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 10057713 - 10057623
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||  |||||||||||||||||||||||||| |||||||||||    
T  10057713 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaattt 10057623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 12778179 - 12778303
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg--aaattgaatttaacatggttgtaggttgagtt 211  Q
    |||||||||||||||||||||| ||| ||| ||||||| | |||||||||||||    ||| ||||  |||||| ||||||||| |||||||||| ||||    
T  12778179 ccttgcaatcgatttcttaaggcaagggtgggactaacattcaataatcttgagtctatgattctgaaaaattgtatttaacat-gttgtaggtttagtt 12778277  T
Q  212 ttt-agaattttagaattagggttaa 236  Q
    ||| ||||||| ||||||||||||||    
T  12778278 tttgagaatttgagaattagggttaa 12778303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 15489452 - 15489577
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgag-caagtgatctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| || |||| | ||||||||||||| | |    |||| |||||| ||||||||| |||||||||| |||||    
T  15489452 ccttgcaatcgatttcttaaggtaagggtgggaataacattcaataatcttgagtctataattctgaaaattgtatttaacat-gttgtaggtttagttt 15489550  T
Q  213 tt-agaattttagaattagggttaaaa 238  Q
    || ||||||| ||||||||||||||||    
T  15489551 ttgagaatttgagaattagggttaaaa 15489577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 19858581 - 19858539
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19858581 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 19858539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 40907925 - 40907829
Alignment:
Q  215 agaattttagaattagggttaaaaa-tgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    ||||||| ||||||||||||||||| |||  |||||||||||||||||| ||||  |||| |||| |||| ||||||| ||| | ||||||||||||    
T  40907925 agaatttgagaattagggttaaaaagtgataaattgatgattagatgatggaaacgtgttgaattaatgtagaaactgagtatagaccttagataat 40907829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 14745574 - 14745616
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  14745574 ttaaagttataaaaagagaaaagtgagaagtcagaatagtttt 14745616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 19858472 - 19858348
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg--aaattgaatttaacatggttgtaggttgagtt 211  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| ||||  |||||| ||||||||| |||||||||| | ||    
T  19858472 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaaattgtatttaacat-gttgtaggtttactt 19858374  T
Q  212 ttt-agaattttagaattagggttaa 236  Q
    ||| ||||||| | ||||||||||||    
T  19858373 tttgagaatttgataattagggttaa 19858348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 14651576 - 14651495
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||  |||||| ||||| ||||| |||| ||||  ||||||||| ||||||||||||| ||||||||||||||    
T  14651576 ggttaaaagtgatcaattgaggattaaatgatggaaacttgtagaattgatgtagaaactgtgtacagaccttagataatcc 14651495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 14745683 - 14745736
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgag 168  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    
T  14745683 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgag 14745736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 16043960 - 16043829
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaatt 278  Q
    |||||| |||||||||| || |||| | ||||||| || |||| |||||||||||||| | |||  ||||||||||||  ||||  |||| |||| ||||    
T  16043960 aaattgtatttaacatg-ttataggattagtttttgaggatttgagaattagggttaagagtgat-aattgatgattaattgatgaaaaactgttgaatt 16043863  T
Q  279 gatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||| |||| |||||||| ||||||||||||||    
T  16043862 gatgtagaaaatgtgtacagaccttagataatcc 16043829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 14970026 - 14970133
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttttt-agaattttagaat 227  Q
    |||||||||| ||||||||||| | |||||||||||||   |||| |||| |||||| ||||||||| ||| |||||| ||||||| ||||||| |||||    
T  14970026 ttaaggtaagggtgagactaacattcaataatcttgagtctgtgattctgaaaattgtatttaacat-gttataggtttagtttttgagaatttgagaat 14970124  T
Q  228 tagggttaa 236  Q
    |||||||||    
T  14970125 tagggttaa 14970133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 15792633 - 15792566
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| ||||||||||||||    
T  15792633 aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatcc 15792566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 26049733 - 26049800
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| ||||||||||||||    
T  26049733 aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatcc 26049800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 52872279 - 52872321
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||||||||| |||||||||||||| ||||    
T  52872279 ttaaggttataaaaagagaaaagcgagaagtcagaataatttt 52872321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 53081415 - 53081481
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatc 311  Q
    ||||||||||||  ||||  | |||||||| |||||||| ||||||||||||| |||||||||||||    
T  53081415 aattgatgattaattgatgtagaattgttagattgatgtagaaactgtgtacataccttagataatc 53081481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 3485927 - 3485791
Alignment:
Q  122 atcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttg-agttttt-aga 217  Q
    |||||||| |||| ||||| ||||||||||| | |||||||||| ||    |||| |||||| ||| |||||||||| |||||||||  ||||||| |||    
T  3485927 atcgatttattaatgtaagggtgagactaacattcaataatcttaagtctatgattctgaaaattggatttaacatg-ttgtaggttttagtttttgaga 3485829  T
Q  218 attttagaattagggttaaaaatgaagaattgatgatt 255  Q
    |||| |||||||||||||||| |||  |||||||||||    
T  3485828 atttgagaattagggttaaaagtgattaattgatgatt 3485791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 363215 - 363109
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  363215 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 363117  T
Q  229 agggttaa 236  Q
    ||||||||    
T  363116 agggttaa 363109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 14852137 - 14852204
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| ||||  ||||||| ||||||||||||||    
T  14852137 aattgaggattagatgatggaaatttgtagaattgatgtagaaagcgtgtacagaccttagataatcc 14852204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 15011521 - 15011607
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaa 267  Q
    |||||| |||||||||| ||||||||| |||||| || ||||  ||||||||||||||| |||  ||||| |||||| ||||| ||||    
T  15011521 aaattgtatttaacatg-ttgtaggtttagttttgaggatttgggaattagggttaaaagtgataaattgttgattatatgattgaaa 15011607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 17334158 - 17334072
Alignment:
Q  225 aattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||| ||||| ||||||||| |||||||||  | ||||||  ||||||||| |||| ||| || | ||||||||||||||    
T  17334158 aattagggttaagaatga-gaattgatggttagatgatgtagaattgtagaattgatgtagaaagtgtttatagaccttagataatcc 17334072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 18214524 - 18214630
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctg-aaattgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||| ||||||| | |||||||||||||    |||| ||| |||||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  18214524 taaggtaagcgtgggactaacattcaataatcttgagtctatgattctgcaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 18214622  T
Q  229 agggttaa 236  Q
    ||||||||    
T  18214623 agggttaa 18214630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 32852237 - 32852190
Alignment:
Q  265 aaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  32852237 aaaattgttagattgatgtagaaactgtttacagaccttagataatcc 32852190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 50221552 - 50221678
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtagg-ttgagttttt-agaattttagaat 227  Q
    ||||||||| ||||||||||| | |||||||||| ||  | ||| |||| |||||| ||||||||| |||||||| || ||||||| ||||||| |||||    
T  50221552 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgagaat 50221650  T
Q  228 tagggttaaaaatgaagaattgatgatt 255  Q
    ||||||||||| ||   |||||||||||    
T  50221651 tagggttaaaagtggttaattgatgatt 50221678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 12612087 - 12612046
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  12612087 ttaaggttataaaaagagaaaagtga-aagtcaaaatagtttt 12612046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 12611978 - 12611941
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaac 152  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  12611978 ccttgcaattgatttcttaaggtaagggtgagactaac 12611941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 15867954 - 15868050
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||| |||||||||||||||  ||| |||||   |||||  ||||  |||||||||| |||||||| ||||| || |||| ||||||||||||||    
T  15867954 agaatttgagaattagggttaaag-tgaggaatttgagattaattgatgaaaaattgttagattgatgtagaaacggtttacagaccttagataatcc 15868050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 25031163 - 25031087
Alignment:
Q  180 aaattgaatttaacatggttgtaggttg-agttttt-agaattttagaattagggttaaaaatgaagaattgatgatt 255  Q
    |||||| |||||||||| |||||||||  ||||||| ||||||| |||||||||||||||| |||  |||||||||||    
T  25031163 aaattggatttaacatg-ttgtaggttttagtttttgagaatttgagaattagggttaaaagtgattaattgatgatt 25031087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 32306295 - 32306332
Alignment:
Q  275 aattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  32306295 aattgatgtagaaagtgtgtacaaaccttagataatcc 32306332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 303 - 539
Target Start/End: Complemental strand, 20119 - 19883
Alignment:
Q  303 tagataatccgatgaattaggttaataaatttatgttaaatccgtgctctaatttgctgctgtgattttgtctctaaattcgttgtttttatgaactcgg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||     
T  20119 tagataatccgatgaattaggttaataaatttatgttaaatccgtgctctaattttctgatgtgattttgtctctaaattcattgtttttatgaactcga 20020  T
Q  403 attcgtcttatttataattctgctgcaattgtatgtatgaaatcgataactctgctggttaatactcatcgtaacaacttgtacatagtcttgaattttt 502  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20019 attcgtcttatttataattctgctgcaattgtatgtatgaaatcgataactctgttggttaatactcatcgtaacaacttgtacatagtcttgaattttt 19920  T
Q  503 gttttatttggttcaacagtggatccattaatagggt 539  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  19919 gttttatttggttcatcagtagatccattaatagggt 19883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 4e-58; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 131 - 312
Target Start/End: Complemental strand, 37516660 - 37516478
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaatta 229  Q
    |||||||||| ||| ||||||||| ||||||||||||| | ||||| |||||||||||||||| | | |||||||||||||||||||||||| |||||||    
T  37516660 ttaaggtaagggtgggactaaccttcaataatcttgagtatgtgattctgaaattgaatttaaaacgattgtaggttgagtttttagaatttgagaatta 37516561  T
Q  230 gggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||    
T  37516560 gggttaaaagtgaggaattgatgattagatgatagaaaattgttgaattgatgtagaaattgtgtacagaccttagataatcc 37516478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 132 - 310
Target Start/End: Original strand, 13660854 - 13661034
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagtttttagaattttagaatta 229  Q
    ||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||| ||||||||||||||||||||||||||  ||||||||||| |||||||    
T  13660854 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaaattgaatttaacatggttgtaggttgaagttttagaatttgagaatta 13660953  T
Q  230 gggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    ||||| ||| ||| ||||||||||||||||||| ||||| |||||| ||||||| ||||||| ||||| ||||||||||||    
T  13660954 gggttcaaagtgatgaattgatgattagatgatggaaaactgttaatttgatgtagaaactgagtacagaccttagataat 13661034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 132 - 310
Target Start/End: Original strand, 13719497 - 13719677
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagtttttagaattttagaatta 229  Q
    ||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||| ||||||||||||||||||||||||||  ||||||||||| |||||||    
T  13719497 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaaattgaatttaacatggttgtaggttgaagttttagaatttgagaatta 13719596  T
Q  230 gggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    ||||| ||| ||| ||||||||||||||||||| ||||| |||||| ||||||| ||||||| ||||| ||||||||||||    
T  13719597 gggttcaaagtgatgaattgatgattagatgatggaaaactgttaatttgatgtagaaactgagtacagaccttagataat 13719677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 312
Target Start/End: Original strand, 19928746 - 19928939
Alignment:
Q  120 caatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgag-tttttag 216  Q
    |||||||| || ||||||||| ||||||||||| | || ||||||| |||   ||| |||| |||||| ||||||||| ||| |||||| || |||||||    
T  19928746 caatcgatatcctaaggtaagggtgagactaacattcattaatcttaagcctttgattctgaaaattgcatttaacat-gttataggtttagttttttag 19928844  T
Q  217 aattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||| |  |||||| |||||||| |||   |||||||||||||||||  ||| ||||| ||||||||| ||||||||||||| ||||||||||||||    
T  19928845 aatgtaggaatta-ggttaaaagtgatagattgatgattagatgatgaaaacttgttgaattgatgtagaaactgtgtacagaccttagataatcc 19928939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 22385134 - 22385256
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    |||||||||| ||||||||| |||||| ||||||| | |||||||||||| | |||  ||||||||||||||||||  |||| |||| ||||||||| ||    
T  22385134 atttaacatg-ttgtaggtttagttttgagaatttga-aattagggttaagagtgat-aattgatgattagatgatgaaaaactgttgaattgatgtaga 22385230  T
Q  287 aactgtgtacaaaccttagataatcc 312  Q
    || |||||||| |||||| |||||||    
T  22385231 aagtgtgtacagaccttatataatcc 22385256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 5340841 - 5340883
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5340841 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 5340883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 11361485 - 11361443
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11361485 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 11361443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 38549007 - 38549049
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38549007 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 38549049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 41599207 - 41599165
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41599207 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 41599165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 11361376 - 11361253
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tct-gaaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||  |||||| ||||||||| |||||||||| |||||    
T  11361376 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctaaaaattgtatttaacat-gttgtaggtttagttt 11361278  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||| ||||||    
T  11361277 ttgagaatttgagaattaaggttaa 11361253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 38549116 - 38549241
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||  ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| ||||| |||| |||||    
T  38549116 ccttgcaatcgatttcttaaggtaagggttggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtgggtttagttt 38549214  T
Q  213 tt-agaattttagaattagggttaaaa 238  Q
    || ||||||| ||||||||| ||||||    
T  38549215 ttgagaatttgagaattaggcttaaaa 38549241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 40492112 - 40492208
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||| |||||||||||||| | ||| ||||||||||||||||| |  ||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  40492112 agaatttgagaattagggttaagagtga-gaattgatgattagatggtgaaaacttgtagaattgatgtagaaagtgtttacagaccttagataatcc 40492208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 2418085 - 2418179
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    ||||||| |||||||||||||| | ||| ||||||||||||||||| |   ||| || | ||||||||| |||| |||||||| ||||||||||||    
T  2418085 agaatttgagaattagggttaagagtga-gaattgatgattagatggtgagaaactgctgaattgatgtagaaagtgtgtacagaccttagataat 2418179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 17085370 - 17085484
Alignment:
Q  197 gttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtac 296  Q
    |||||||| | ||||||| ||| || | |||||||||||| | |||  |||||| ||||||||||| |||| ||||| |||| |||| |||| ||||| |    
T  17085370 gttgtagggttagtttttggaaattgaaaattagggttaagagtgat-aattgaggattagatgatggaaacttgttgaatttatgtagaaagtgtgttc 17085468  T
Q  297 aaaccttagataatcc 312  Q
    | ||||||||||||||    
T  17085469 agaccttagataatcc 17085484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 19807393 - 19807484
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||  |||||||||||||| ||||||||||  |||||||||||    
T  19807393 ttaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaagatgaatttaacatggatgtaggttgaagttttagaattt 19807484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 21979551 - 21979646
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    ||||||| |||||||||||||||| |||  | ||| |||||||||| |  |||  |||| |||| |||| ||||||||||||| ||||||||||||    
T  21979551 agaatttgagaattagggttaaaagtgataatttggtgattagatgttgaaaacgtgttgaattaatgtagaaactgtgtacataccttagataat 21979646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 21999522 - 21999617
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    ||||||| |||||||||||||||| |||  | ||| |||||||||| |  |||  |||| |||| |||| ||||||||||||| ||||||||||||    
T  21999522 agaatttgagaattagggttaaaagtgataatttggtgattagatggtgaaaacgtgttgaattaatgtagaaactgtgtacagaccttagataat 21999617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 236
Target Start/End: Original strand, 16412632 - 16412741
Alignment:
Q  129 tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttaga 225  Q
    |||||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||    
T  16412632 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgaga 16412730  T
Q  226 attagggttaa 236  Q
    |||||||||||    
T  16412731 attagggttaa 16412741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 20404120 - 20404015
Alignment:
Q  133 aaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctga-aattgaatttaacatggttgtaggttgagttttt-agaattttagaatta 229  Q
    |||||||| ||| ||||||| | |||||||||||||    |||| |||| ||||| |||||||||| ||||||||| ||||||| |||||||||||||||    
T  20404120 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgataattgtatttaacatg-ttgtaggtttagtttttgagaattttagaatta 20404022  T
Q  230 gggttaa 236  Q
    |||||||    
T  20404021 gggttaa 20404015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 20532628 - 20532713
Alignment:
Q  226 attagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||| | ||| ||||||||| |||||||||  | |||||| |||||||||| |||| ||| |||| ||||||||||||||    
T  20532628 attagggttaagagtga-gaattgatggttagatgatgtagaattgtaaaattgatgtagaaagtgtttacagaccttagataatcc 20532713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 22252372 - 22252495
Alignment:
Q  187 atttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    |||||||||| ||||||||| ||||||| ||||||| | |||||||||||| | |||  ||||||||||||||||||   ||| || | ||||||||| |    
T  22252372 atttaacatg-ttgtaggtttagtttttgagaatttga-aattagggttaagagtgat-aattgatgattagatgatgagaaactgctgaattgatgtag 22252468  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    ||| |||||||| | ||||||||||||    
T  22252469 aaagtgtgtacagaacttagataatcc 22252495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 41599098 - 41599061
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaac 152  Q
    |||||||||||||||||||||||||| |||||||||||    
T  41599098 ccttgcaatcgatttcttaaggtaagggtgagactaac 41599061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 1326444 - 1326551
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaat 227  Q
    |||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||||    
T  1326444 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaat 1326542  T
Q  228 tagggttaa 236  Q
    |||||||||    
T  1326543 tagggttaa 1326551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 14102462 - 14102530
Alignment:
Q  244 gaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||  ||||  ||| |||||| |||||||| |||||||| |||| ||||||||||||||    
T  14102462 gaattgatgattaattgatgaaaagttgttagattgatgtagaaactgtttacagaccttagataatcc 14102530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 21966780 - 21966872
Alignment:
Q  218 attttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    |||| |||||||||||||||| ||| || ||| ||||||||||||  |||  |||| |||| ||||  ||| |||||||| ||||||||||||    
T  21966780 atttgagaattagggttaaaagtgatgatttggtgattagatgatgaaaacgtgttgaattaatgtaaaaattgtgtacagaccttagataat 21966872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 39834517 - 39834449
Alignment:
Q  244 gaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||  ||||  ||| |||||| |||||||| |||||||| |||| ||||||||||||||    
T  39834517 gaattgatgattaattgatgaaaagttgttagattgatgtagaaactgtttacagaccttagataatcc 39834449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 19154125 - 19154192
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||  ||||  |||||||||| |||||||| ||||||||||| | |||||||| |||||    
T  19154125 aattgatgattaattgatgaaaaattgttagattgatgtagaaactgtgtatagaccttagacaatcc 19154192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 20457520 - 20457414
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgatc-tgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||| ||||||| | |||||||||||||    ||||| ||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  20457520 taaggtaagggtgggactaacattcaataatcttgagtctatgatcctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 20457422  T
Q  229 agggttaa 236  Q
    ||||||||    
T  20457421 agggttaa 20457414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 22365474 - 22365427
Alignment:
Q  265 aaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  22365474 aaaattgttagattgatgtagaaactgtttacagaccttagataatcc 22365427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 312
Target Start/End: Complemental strand, 22526394 - 22526281
Alignment:
Q  197 gttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtac 296  Q
    |||||||||| |||||| ||||||   |||||||| |||||| |||  |||||| |||||||||||  ||| ||||  ||||||||| |||| ||| |||    
T  22526394 gttgtaggtttagttttgagaattgg-gaattagg-ttaaaagtgatcaattgaggattagatgatgaaaacttgtagaattgatgtagaaagtgtttac 22526297  T
Q  297 aaaccttagataatcc 312  Q
    | ||||||||||||||    
T  22526296 ataccttagataatcc 22526281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 32810536 - 32810430
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  32810536 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 32810438  T
Q  229 agggttaa 236  Q
    ||||||||    
T  32810437 agggttaa 32810430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 37609722 - 37609828
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||||||||||| | |||||||||||||    |||| || ||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  37609722 taaggtaagggtgagactaacattcaataatcttgagtctatgattctaaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 37609820  T
Q  229 agggttaa 236  Q
    ||||||||    
T  37609821 agggttaa 37609828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 16800312 - 16800231
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||  |||||| |||||||||||  ||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  16800312 ggttaaaagtgatcaattgaggattagatgatgaaaacttgtagaattgatgtagaaagtgtttacagaccttagataatcc 16800231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 22237103 - 22237140
Alignment:
Q  184 tgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  22237103 tgaatttaacatggttgtaggttgaggtttcagaattt 22237140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 22984517 - 22984436
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||  |||||| ||||||||||| |||| ||||  || |||||| |||| ||| |||| ||||||||||||||    
T  22984517 ggttaaaagtgatcaattgaggattagatgatggaaacttgtagaactgatgtagaaagtgtttacagaccttagataatcc 22984436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 27471787 - 27471843
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagttttt-agaattttagaattagggttaa 236  Q
    |||||| |||||||||| ||||||||| ||||||| ||||||| ||||||||||||||    
T  27471787 aaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaattagggttaa 27471843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 28398427 - 28398362
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| || ||||| ||||||||||||    
T  28398427 aattgaggattagatgatggaaatttgtagaattgatgtagaaagtgcgtacagaccttagataat 28398362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 32122520 - 32122464
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagttttt-agaattttagaattagggttaa 236  Q
    |||||| |||||||||| ||||||||| ||||||| ||||||| ||||||||||||||    
T  32122520 aaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaattagggttaa 32122464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 131 - 311
Target Start/End: Original strand, 2470 - 2652
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctgaaattgaatttaacatggttgtaggttgagtttt-tagaattttagaatt 228  Q
    |||||||||| ||| ||||||||| ||||||||||||| | |||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  2470 ttaaggtaagggtgggactaaccttcaataatcttgagtatgtgaatctgaaattgaatttaacatggttgtaggttaagttttttagaatttgagaatt 2569  T
Q  229 agggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatc 311  Q
    |||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| || || |||||||    
T  2570 agggttaaaagtgacgaattgatgattagatgatagaaaactgttgaattgatgtagaaactgtgtacagacttttgataatc 2652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 22375800 - 22375981
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaattag 230  Q
    ||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  22375800 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaattgaatttaacatggttgtaggttggagttttagaatttgagaattag 22375899  T
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| ||| |||||||||||||||||||  |||| |||| ||||||||| |||||| |||||| ||||||||||||||    
T  22375900 ggttaaaagtgaggaattgatgattagatgatgaaaaactgttgaattgatgtagaaactatgtacagaccttagataatcc 22375981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 132 - 312
Target Start/End: Complemental strand, 16966818 - 16966637
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaattag 230  Q
    |||| |||| |||||||||||||  ||||||||| || | |||| ||||||||||||||||||||||||||||||||   |||||||||||  | |||||    
T  16966818 taagttaagggtgagactaacctttaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggttgtagttttagaatttggggattag 16966719  T
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
      |||||| |||  ||||||||| |||||||| ||||| |||| ||||||||| ||||||||||||| ||||||||||||||    
T  16966718 ttttaaaagtgataaattgatgactagatgatggaaaactgttgaattgatgtagaaactgtgtacagaccttagataatcc 16966637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 20183676 - 20183590
Alignment:
Q  226 attagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||||| ||||||||||||||    
T  20183676 attagggttaaaagtgatgaattgaggattagatgatggaaaactgttagattgatgtagaaactgtgtacagaccttagataatcc 20183590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 22152315 - 22152401
Alignment:
Q  226 attagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||||| ||||||||||||||    
T  22152315 attagggttaaaagtgatgaattgaggattagatgatggaaaactgttagattgatgtagaaactgtgtacagaccttagataatcc 22152401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 20137569 - 20137446
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    |||||||||| ||||||||| |||||| |||||||  ||||||||||||||| ||| |||||||||||||||||||  |||| || | ||||||||| ||    
T  20137569 atttaacatg-ttgtaggtttagttttgagaatttg-gaattagggttaaaagtgatgaattgatgattagatgatgaaaaactgctgaattgatgtaga 20137472  T
Q  287 aactgtgtacaaaccttagataatcc 312  Q
    || |||||||| ||||| ||||||||    
T  20137471 aagtgtgtacagaccttggataatcc 20137446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 22195300 - 22195423
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    |||||||||| ||||||||| |||||| |||||||  ||||||||||||||| ||| |||||||||||||||||||  |||| || | ||||||||| ||    
T  22195300 atttaacatg-ttgtaggtttagttttgagaatttg-gaattagggttaaaagtgatgaattgatgattagatgatgaaaaactgctgaattgatgtaga 22195397  T
Q  287 aactgtgtacaaaccttagataatcc 312  Q
    || |||||||| ||||| ||||||||    
T  22195398 aagtgtgtacagaccttggataatcc 22195423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 18198675 - 18198763
Alignment:
Q  224 gaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| |||||||| ||| |||||||||||||||||||  |||||||||| |||||||| ||||||||| ||  ||||||||||||||    
T  18198675 gaattaaggttaaaagtgaggaattgatgattagatgatgaaaaattgttagattgatgtagaaactgtgcacggaccttagataatcc 18198763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 25721164 - 25721041
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  25721164 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 25721066  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  25721065 ttgagaatttgagaattagggttaa 25721041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 20733244 - 20733334
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| ||||||||||||| ||||||| ||||| | ||||| |||||  | |||||||||||||||||||||||| |||||||||||    
T  20733244 taaggtaagggtgagactaaccttcaataattttgagtatgtgattctgaagataaatttaacatggttgtaggttgaggttttagaattt 20733334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 27572168 - 27572230
Alignment:
Q  176 tctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaattagggttaaaa 238  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||    
T  27572168 tctgaaattgaatttaacatggttgtaggttaaagttttagaatttgagaattagggttaaaa 27572230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 18697425 - 18697302
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    |||||||||| ||| ||||| |||||| ||||||  ||||||||| |||||| ||| |||||||||||||||||||  |||| ||||| |||||||| ||    
T  18697425 atttaacatg-ttggaggtttagttttgagaattggagaattagg-ttaaaagtgaggaattgatgattagatgatgaaaaagtgttagattgatgtaga 18697328  T
Q  287 aactgtgtacaaaccttagataatcc 312  Q
    || |||||| | |||||||| |||||    
T  18697327 aattgtgtatagaccttagacaatcc 18697302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 18707176 - 18707053
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    |||||||||| ||| ||||| |||||| ||||||  ||||||||| |||||| ||| |||||||||||||||||||  |||| ||||| ||||||||  |    
T  18707176 atttaacatg-ttggaggtttagttttgagaattggagaattagg-ttaaaagtgaggaattgatgattagatgatgaaaaagtgttagattgatgtaaa 18707079  T
Q  287 aactgtgtacaaaccttagataatcc 312  Q
    ||||||||||| | |||||| |||||    
T  18707078 aactgtgtacagatcttagacaatcc 18707053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 17027847 - 17027970
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  17027847 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 17027945  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||| | ||||||||||||||    
T  17027946 ttgagaatctgagaattagggttaa 17027970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 25689492 - 25689369
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  25689492 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 25689394  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| |||||||| |||||    
T  25689393 ttgagaatttgagaattagagttaa 25689369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 25536073 - 25535951
Alignment:
Q  116 cttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagtttt 213  Q
    ||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| ||||||    
T  25536073 cttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagtttt 25535975  T
Q  214 t-agaattttagaattagggttaa 236  Q
    | ||||||| ||||||| ||||||    
T  25535974 tgagaatttgagaattatggttaa 25535951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 17229121 - 17229243
Alignment:
Q  187 atttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    |||||||||| ||||||||| ||||||| ||||||| | |||||||||||| | |||  |||||||||||||||||| ||||| || | ||||||||| |    
T  17229121 atttaacatg-ttgtaggtttagtttttgagaatttga-aattagggttaagagtgat-aattgatgattagatgat-gaaaactgctgaattgatgtag 17229216  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    ||| |||||||| ||||||||||||||    
T  17229217 aaagtgtgtacagaccttagataatcc 17229243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 16246221 - 16246097
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttaga-attagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaatt 278  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||         ||| |||||||||||||  ||||| |||| |||  ||||    
T  16246221 aaattgaatttaacatggttgtagattgagtttttagaatttgagagattag---------tgaggaattgatgattaattgataaaaaactgtcgaatt 16246131  T
Q  279 gatgttgaaactgtgtacaaaccttagataatcc 312  Q
     |||| |||| |||||||| ||||||||||||||    
T  16246130 aatgtagaaattgtgtacagaccttagataatcc 16246097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 28103448 - 28103629
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttag--aattttagaatt 228  Q
    ||||||||| ||| |||||| || |||||||  |||| | ||||| |||||  |||||||||||||||||||||||||| ||||||  ||||  ||||||    
T  28103448 taaggtaagggtgggactaatcttcaataattctgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaaaattggagaatt 28103547  T
Q  229 agggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||  | ||| |||  |||||||| |||  ||||  ||| |||||| |||||||| |||| ||| |||| ||||||||||||||    
T  28103548 agg--ttaaagtgagaaattgatgtttaattgatgaaaagttgttagattgatgtagaaattgtttacagaccttagataatcc 28103629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 18914983 - 18914861
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||| ||||||||||||||| ||| ||||||| | |||||||||||| | | ||| |||| |||||| ||||||||| |||||||||| |||||    
T  18914983 ccttgcaatcaatttcttaaggtaagggtgggactaacattcaataatcttgatcta-tgattctgaaaattgtatttaacat-gttgtaggtttagttt 18914886  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||| ||||||||    
T  18914885 ttgagaatttgagaataagggttaa 18914861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 18231023 - 18230936
Alignment:
Q  225 aattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||| || ||||||||||||||  | ||  ||| |||||| |||||||| ||||| ||||||| ||||||||||||||    
T  18231023 aattagggttaaaagtgtagaattgatgattaattcatgaaaagttgttagattgatgtagaaaccgtgtacagaccttagataatcc 18230936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 18231425 - 18231342
Alignment:
Q  229 agggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||| || ||||||||||||||  ||||  ||| |||||| |||||||| ||||| ||||||| ||||||||||||||    
T  18231425 agggttaaaagtgtagaattgatgattaattgatgaaaagttgttagattgatgtagaaaccgtgtacagaccttagataatcc 18231342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 17027738 - 17027780
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  17027738 ttaaggttataaaaagagaaaagtgagaagtcataatagtttt 17027780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 17882710 - 17882835
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||||||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| |||||||  |||||    
T  17882710 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgcatttaacatg-ttgtaggtttagtttttgagaatttgggaatt 17882808  T
Q  229 agggttaaaaatgaagaattgatgatt 255  Q
    |||||||||| |||  |||||||||||    
T  17882809 agggttaaaagtgattaattgatgatt 17882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 25739289 - 25739194
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaat-tgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    ||||||| |||||||||||||||| |||  | |||||||||||||| | |||||| |||| |||| |||| ||||||||||||| ||||| ||||||    
T  25739289 agaatttgagaattagggttaaaagtgataatttgatgattagatggt-gaaaatgtgttgaattaatgtagaaactgtgtacagacctttgataat 25739194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 31629861 - 31629967
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||||||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  31629861 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 31629959  T
Q  229 agggttaa 236  Q
    ||||||||    
T  31629960 agggttaa 31629967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 35012008 - 35011941
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||  ||||  |||||||||| |||||||| ||||||||||||| |||||||| |||||    
T  35012008 aattgatgattaattgatgaaaaattgttagattgatgtagaaactgtgtacagaccttagacaatcc 35011941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 27852258 - 27852168
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| ||| ||||||||| |||| ||  | || | ||||| |||||  |||||||||||||||||||||||||| |||||||||||    
T  27852258 taaggtaagggtgggactaaccttcaatcattctaagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaattt 27852168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 34964025 - 34963916
Alignment:
Q  129 tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttaga 225  Q
    |||||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||    
T  34964025 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgaga 34963927  T
Q  226 attagggttaa 236  Q
    |||||||||||    
T  34963926 attagggttaa 34963916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 25753493 - 25753385
Alignment:
Q  129 tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttaga 225  Q
    |||||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||    
T  25753493 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgaga 25753395  T
Q  226 attagggtta 235  Q
    ||||||||||    
T  25753394 attagggtta 25753385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 25755663 - 25755555
Alignment:
Q  129 tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttaga 225  Q
    |||||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||    
T  25755663 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgaga 25755565  T
Q  226 attagggtta 235  Q
    ||||||||||    
T  25755564 attagggtta 25755555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 16198447 - 16198341
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  16198447 taaggtaagggtgtgactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 16198349  T
Q  229 agggttaa 236  Q
    ||||||||    
T  16198348 agggttaa 16198341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 19772717 - 19772803
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaa 267  Q
    |||||| |||||||||| ||||||||| |||||| || ||||  ||||||||||||||| |||  ||||| |||||| ||||| ||||    
T  19772717 aaattgtatttaacatg-ttgtaggtttagttttgaggatttgggaattagggttaaaagtgataaattgttgattatatgattgaaa 19772803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 22792541 - 22792608
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  22792541 aattgaggattagatgatggaaatttgtagaattgatgtagaaagtgtatacagaccttagataatcc 22792608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 23527388 - 23527482
Alignment:
Q  218 attttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatccg 313  Q
    |||| |||||||||||||| | |||  || |||||||||  ||||  ||||||| | ||||||||| |||| |||||||| |||||||||||||||    
T  23527388 atttgagaattagggttaagagtgat-aagtgatgattaattgatgaaaaattgctgaattgatgtagaaagtgtgtacagaccttagataatccg 23527482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 18915080 - 18915050
Alignment:
Q  25 aaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||    
T  18915080 aaagagaaaagtgagaagtcagaatagtttt 18915050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 23993074 - 23992965
Alignment:
Q  129 tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttaga 225  Q
    |||||||||||| ||| ||||||| | |||||||||||||    | || |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||    
T  23993074 tcttaaggtaagggtgggactaacattcaataatcttgagtctataattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgaga 23992976  T
Q  226 attagggttaa 236  Q
    |||||||||||    
T  23992975 attagggttaa 23992965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 23539790 - 23539709
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||  ||||||||||||  ||||  ||| |||||| |||||||| |||||||| |||| |||||||| |||||    
T  23539790 ggttaaaagtgagaaattgatgattaattgatgaaaagttgttagattgatgtagaaactgtatacagaccttagacaatcc 23539709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 8055928 - 8055853
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgatt 255  Q
    |||||| |||||||||| ||||||||| ||||||| |||||||  ||||||||||||||| |||  | |||||||||    
T  8055928 aaattgtatttaacatg-ttgtaggtttagtttttgagaatttgggaattagggttaaaagtgattatttgatgatt 8055853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 120 - 312
Target Start/End: Complemental strand, 56006 - 55811
Alignment:
Q  120 caatcgatt-tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttaga 217  Q
    ||||||||| || ||||||||| ||||||||||||| |||||||  |||| | ||||| |||||||||||||||||||||||||||||| |  |||||||    
T  56006 caatcgattatcctaaggtaagggtgagactaaccttcaataattctgagtatgtgattctgaaattgaatttaacatggttgtaggttaaagttttaga 55907  T
Q  218 attttagaattagggttaaaaatgaagaattga-tgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||| |||||||||||||||| || |||||| |  ||||||||||| ||||  |||| ||||||||| |||| |||||||||||||||||||||||    
T  55906 atttgagaattagggttaaaattggagaattaaccgattagatgatggaaacatgttgaattgatgtagaaattgtgtacaaaccttagataatcc 55811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 88; Significance: 5e-42; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 120 - 309
Target Start/End: Complemental strand, 499123 - 498932
Alignment:
Q  120 caatcgatt-tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttaga 217  Q
    ||||||||| || ||||||||| ||| ||||||||| ||||||| ||||| | ||||| |||||| ||||||||||||||||||||||||   |||||||    
T  499123 caatcgattatcctaaggtaagggtgggactaaccttcaataattttgagtatgtgattctgaaaatgaatttaacatggttgtaggttgtagttttaga 499024  T
Q  218 attttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataa 309  Q
    ||||  ||||||||||||||| | | ||||||||||||||||||| || || |||| ||||||||| ||||||||||||| |||||||||||    
T  499023 atttgggaattagggttaaaagtaatgaattgatgattagatgatggagaactgttgaattgatgtagaaactgtgtacagaccttagataa 498932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 447352 - 447285
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| ||||||||||||||    
T  447352 aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatcc 447285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 498262 - 498195
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||| | ||||||||||||||    
T  498262 aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtatagaccttagataatcc 498195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 501906 - 501800
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    |||||||||||||  |||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  501906 taaggtaagtgtggtactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 501808  T
Q  229 agggttaa 236  Q
    ||||||||    
T  501807 agggttaa 501800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 12115 - 12297
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattttaga-atta 229  Q
    ||||||||| ||| ||||||||| |||||||  |||| | ||||| ||||||| ||||||||||||||||||||||||  ||||||||||| ||| ||||    
T  12115 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaatcgaatttaacatggttgtaggttgaagttttagaatttgagagatta 12214  T
Q  230 gggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||| |||  ||||||||||| |||||| || ||  ||| ||||||||| ||||||||||||| ||||||||||||||    
T  12215 gggttaaaagtgagtaattgatgattggatgatggacaaccgttgaattgatgtagaaactgtgtacataccttagataatcc 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 180 - 312
Target Start/End: Original strand, 3943 - 4076
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttaga-attagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaatt 278  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| ||||||||||||||||||| |||||  | | ||||    
T  3943 aaattgaatttaacatggttgtaggttgaggttttagaatttgagagattagggttaaaagtgaggaattgatgattagatgatggaaaaccgatgaatt 4042  T
Q  279 gatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||| |||||| |||||| ||||||||||||||    
T  4043 gatgtagaaactatgtacataccttagataatcc 4076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 312
Target Start/End: Original strand, 13937 - 14070
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttaga-attagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaatt 278  Q
    |||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||| ||| ||||||||||||||||||| |||||  | | ||||    
T  13937 aaattgaatttaacatggttgtaggttgaggttttaaaatttgagagattagggttaaaagtgaggaattgatgattagatgatggaaaaccgatgaatt 14036  T
Q  279 gatgttgaaactgtgtacaaaccttagataatcc 312  Q
     |||| ||||||||||||| ||||||||||||||    
T  14037 aatgtagaaactgtgtacataccttagataatcc 14070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 132 - 310
Target Start/End: Complemental strand, 4217 - 4039
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaattag 230  Q
    ||||||||  ||||||||||||| ||||| |  | || | |||| ||||||||| ||||||||||||||||||||||| ||||||| |||| ||||||||    
T  4217 taaggtaaaggtgagactaaccttcaatacttctaagtatgtgattctgaaattcaatttaacatggttgtaggttgaatttttaggatttgagaattag 4118  T
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    |||||||| ||| || ||||||||||||||   ||||| |||| ||||||||| |||| |||||||||||||||||||||    
T  4117 ggttaaaagtgaggatttgatgattagatg-gggaaaactgttgaattgatgtagaaattgtgtacaaaccttagataat 4039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 132 - 310
Target Start/End: Original strand, 10762 - 10941
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaattag 230  Q
    ||||||||| ||| ||||||||| |||||||  |||| | ||||| ||||||||||||||||||||||||||||||||  ||||| |||||  |||||||    
T  10762 taaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaaattgaatttaacatggttgtaggttgaagttttataatttgggaattag 10861  T
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    |||||||| |    |||||||||||||||||| ||||  |||| ||||||||| |||| |||||||| ||||||||||||    
T  10862 ggttaaaagttgtaaattgatgattagatgatggaaacctgttgaattgatgtagaaattgtgtacagaccttagataat 10941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 118750 - 118934
Alignment:
Q  127 tttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctgaaattgaatttaacatggttgtaggttgagtttttagaattttaga 225  Q
    |||||||||||||| ||| ||||||||| ||||||||||||| | |||| |||||||||  |||||||||| ||| ||||| |||||| ||||||  |||    
T  118750 tttcttaaggtaagggtgggactaaccttcaataatcttgagtatgtgaatctgaaattagatttaacatg-ttggaggtttagttttgagaattggaga 118848  T
Q  226 attagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    | |||| |||||| ||| |||||||||||||||||||  |||| ||||| |||||||| |||| ||| |||| || |||||||||||    
T  118849 actagg-ttaaaagtgaggaattgatgattagatgatgaaaaagtgttagattgatgtagaaagtgtttacagactttagataatcc 118934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 185110 - 185005
Alignment:
Q  133 aaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatta 229  Q
    |||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||||||    
T  185110 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatta 185012  T
Q  230 gggttaa 236  Q
    |||||||    
T  185011 gggttaa 185005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 197 - 312
Target Start/End: Complemental strand, 10321 - 10206
Alignment:
Q  197 gttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtac 296  Q
    ||||| |||| |||||| |||||||  ||||||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||||    
T  10321 gttgttggtttagttttgagaatttgggaattagggttaaaagtgatgaattgaggattagatgatggaaaactgttagattgatgtagaaactgtgtac 10222  T
Q  297 aaaccttagataatcc 312  Q
    | ||||||||||||||    
T  10221 agaccttagataatcc 10206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 312
Target Start/End: Original strand, 1220 - 1354
Alignment:
Q  180 aaattgaatttaacatggttgtaggttg-agtttttagaattttaga-attagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaat 277  Q
    |||||||||||||||||| ||||||||| | ||||||| |||| | | ||||||||||||| ||| ||||||||||||||||||| |||||  ||| |||    
T  1220 aaattgaatttaacatggctgtaggttgtattttttaggatttgacagattagggttaaaagtgaggaattgatgattagatgatggaaaaccgttgaat 1319  T
Q  278 tgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||||| ||| ||||||||||    
T  1320 tgatgtagaaactgtgtacagaccatagataatcc 1354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 24792759 - 24792940
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaattag 230  Q
    ||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||| ||||||||||||||||||||||||   | ||||||||| ||||||||    
T  24792759 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaactgaatttaacatggttgtaggttggagtcttagaatttgagaattag 24792858  T
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| || ||||||  | | |  |   ||||||  |||| ||||||||| ||||||||||||||||||||||||||||    
T  24792859 ggttaaaattggagaattagtcaattaagagtagaaacctgttgaattgatgtagaaactgtgtacaaaccttagataatcc 24792940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 24834023 - 24834204
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaattag 230  Q
    ||||||||| ||| ||||||||  |||||||  |||| | ||||| | |||||||||||||||||||||||||||||   ||||||||||| | ||||||    
T  24834023 taaggtaagggtgggactaaccatcaataattctgagtatgtgattccgaaattgaatttaacatggttgtaggttggagttttagaatttgataattag 24834122  T
Q  231 ggttaaaaatgaagaatt-gatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| || |||||| |   |||| | | ||||||  |||| ||||||||| ||||||||||||| ||||||||||||||    
T  24834123 ggttaaaattggagaattagtcaattaaaag-tagaaacatgttgaattgatgtagaaactgtgtacagaccttagataatcc 24834204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 23932319 - 23932196
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||| ||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  23932319 ccttgcaatctatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 23932221  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  23932220 ttgagaatttgagaattagggttaa 23932196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 27473513 - 27473418
Alignment:
Q  127 tttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| |||| ||| ||||||||| |||||||  |||| | ||||| |||||  |||||||||||||||||||||||||| |||||||||||    
T  27473513 tttcttaagttaagggtgggactaaccttcaataattatgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaattt 27473418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 24682404 - 24682362
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24682404 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 24682362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 34858192 - 34858282
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| ||| ||||||||| ||||||| ||||| | ||||| |||||  |||||||||||||||| ||||||||| |||||||||||    
T  34858192 taaggtaagggtgggactaaccttcaataattttgagtatgtgattctgaagatgaatttaacatggttttaggttgaggttttagaattt 34858282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 34873254 - 34873344
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| ||| ||||||||| ||||||| ||||| | ||||| |||||  |||||||||||||||| ||||||||| |||||||||||    
T  34873254 taaggtaagggtgggactaaccttcaataattttgagtatgtgattctgaagatgaatttaacatggttttaggttgaggttttagaattt 34873344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 23706329 - 23706452
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||| ||| |||||    
T  23706329 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtatgtttagttt 23706427  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || | ||||| ||||||||||||||    
T  23706428 ttgataatttgagaattagggttaa 23706452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 23706220 - 23706262
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  23706220 ttaaggttataaaaagagaaaagtgagaagtcaaaatagtttt 23706262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 24671993 - 24671951
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  24671993 ttaaggttataaaaagagaaaagtgagaagtcataatagtttt 24671951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 24671884 - 24671761
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tct-gaaattgaatttaacatggttgtaggttgagttt 212  Q
    ||||||||||||||||| |||||||| ||| ||||||| | |||||||||||||    ||| |||  |||||| |||||| || |||||||||| |||||    
T  24671884 ccttgcaatcgatttctcaaggtaagggtgggactaacattcaataatcttgagtctatgattctaaaaattgtatttaatat-gttgtaggtttagttt 24671786  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  24671785 ttgagaatttgagaattagggttaa 24671761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 18546256 - 18546323
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| ||||||||||||||    
T  18546256 aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatcc 18546323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 23005610 - 23005543
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||  ||||  |||||||||||||| |||| |||||||| |||| ||||||||||||||    
T  23005610 aattgatgattaattgatgaaaaattgttaaatttatgtagaaactgtttacagaccttagataatcc 23005543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 27845515 - 27845429
Alignment:
Q  225 aattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||| |||  |||||| ||||||||||| |||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  27845515 aattagggttaaaagtgat-aattgaggattagatgatggaaatttgtagaattgatgtagaaagtgtatacataccttagataatcc 27845429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 45027220 - 45027326
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||||||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  45027220 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 45027318  T
Q  229 agggttaa 236  Q
    ||||||||    
T  45027319 agggttaa 45027326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 23932428 - 23932386
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  23932428 ttaaggttataaaaagagaaaagtgagaagttagaataatttt 23932386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 236
Target Start/End: Original strand, 32214247 - 32214356
Alignment:
Q  129 tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttaga 225  Q
    |||||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||    
T  32214247 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgaga 32214345  T
Q  226 attagggttaa 236  Q
    |||||||||||    
T  32214346 attagggttaa 32214356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 41523202 - 41523306
Alignment:
Q  133 aaggtaagtgtgagactaacctccaataatcttgagcaagtgatctg-aaattgaatttaacatggttgtaggttgagttttt-agaattttagaattag 230  Q
    |||||||| ||||| ||||| | |||||||||||||    ||||||| |||||| |||||| || |||||||||| ||||||| ||||||| ||||||||    
T  41523202 aaggtaagggtgaggctaacattcaataatcttgagtctatgatctgaaaattgtatttaatat-gttgtaggtttagtttttgagaatttgagaattag 41523300  T
Q  231 ggttaa 236  Q
    ||||||    
T  41523301 ggttaa 41523306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 23792134 - 23792074
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttag 305  Q
    ||||||||||||  ||||  |||||||||| |||||||| ||||||||||||| |||||||    
T  23792134 aattgatgattaattgatgaaaaattgttagattgatgtagaaactgtgtacagaccttag 23792074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 22106307 - 22106201
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  22106307 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 22106209  T
Q  229 agggttaa 236  Q
    ||||||||    
T  22106208 agggttaa 22106201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 23208156 - 23208089
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||  ||||  | |||||||| |||||||| |||||||| |||| ||||||||||||||    
T  23208156 aattgatgattaattgatgtagaattgttagattgatgtagaaactgtttacagaccttagataatcc 23208089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 24682292 - 24682245
Alignment:
Q  118 tgcaatcgatttcttaaggtaagtgtgagactaacctccaataatctt 165  Q
    ||||||||||||||||||||||| ||| ||||||| | ||||||||||    
T  24682292 tgcaatcgatttcttaaggtaagggtgggactaacattcaataatctt 24682245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 25109728 - 25109661
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||  ||||  ||| |||||| |||||||| |||| |||||||| ||||||||||||||    
T  25109728 aattgatgattaattgatgaaaagttgttagattgatgtagaaaatgtgtacagaccttagataatcc 25109661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 312
Target Start/End: Complemental strand, 26393308 - 26393194
Alignment:
Q  197 gttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtac 296  Q
    |||||||||| |||||| ||||||  | |||||||||||| | ||  |||||||||  ||||||||  | ||||| | ||||||||| |||| ||| |||    
T  26393308 gttgtaggtttagttttgagaattggaaaattagggttaagagtgt-gaattgatggatagatgatgtagaattgctgaattgatgtagaaagtgtatac 26393210  T
Q  297 aaaccttagataatcc 312  Q
    | ||||||||||||||    
T  26393209 agaccttagataatcc 26393194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 6726888 - 6726783
Alignment:
Q  133 aaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatta 229  Q
    |||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||||||    
T  6726888 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatta 6726790  T
Q  230 gggttaa 236  Q
    |||||||    
T  6726789 gggttaa 6726783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 20916306 - 20916269
Alignment:
Q  184 tgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||||||||||||||||||||||||  |||||||||||    
T  20916306 tgaatttaacatggttgtaggttgatgttttagaattt 20916269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 22458800 - 22458868
Alignment:
Q  244 gaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| ||||  ||||  ||| |||||| |||||||| |||||||| |||| ||||||||||||||    
T  22458800 gaattgataattaattgatgaaaagttgttagattgatgtagaaactgtttacagaccttagataatcc 22458868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 6e-26; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 14604864 - 14604734
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattg 279  Q
    |||||| ||||||| || |||||| || |||||| |||||||  ||||||||||||||| ||| ||||||| ||||||||||| ||||| ||||| ||||    
T  14604864 aaattgtatttaacttg-ttgtagctttagttttgagaatttg-gaattagggttaaaagtgatgaattgaggattagatgatggaaaactgttagattg 14604767  T
Q  280 atgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||| ||||||||||||| ||||||||||||||    
T  14604766 atgtagaaactgtgtacagaccttagataatcc 14604734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 46752158 - 46752051
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaattag 230  Q
    ||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||||||||||||||||||||||||||| |  |||||| |||| ||||||||    
T  46752158 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaattgaatttaacatggttgtaggttaaagttttaggatttgagaattag 46752059  T
Q  231 ggttaaaa 238  Q
    ||||||||    
T  46752058 ggttaaaa 46752051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 197 - 312
Target Start/End: Complemental strand, 37428601 - 37428486
Alignment:
Q  197 gttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgta 295  Q
    |||||||||| ||||||| ||||||| |||||||||||||| | |||  |||||| ||||||||||| ||||| ||||| |||||||| |||| ||||||    
T  37428601 gttgtaggtttagtttttgagaatttgagaattagggttaagagtgat-aattgacgattagatgatggaaaactgttagattgatgtagaaagtgtgta 37428503  T
Q  296 caaaccttagataatcc 312  Q
    || |||||||| |||||    
T  37428502 cagaccttagacaatcc 37428486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 6804891 - 6804982
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||||||||| ||||||||||||| |||||||  |||| | ||||| |||||||||||||||||||||||||||||| |  |||||||||||    
T  6804891 ttaaggtaagggtgagactaaccttcaataattctgagtatgtgattctgaaattgaatttaacatggttgtaggttaaagttttagaattt 6804982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 52988858 - 52988948
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| ||||||||||||| |||||||  |||| | ||||| |||||  |||||||||||||||||||||||||| |||||||||||    
T  52988858 taaggtaagggtgagactaaccttcaataattctgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaattt 52988948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 11202174 - 11202093
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| ||| |||||||||||||||||||  |||| ||||| |||||||| |||| |||||||| ||||||||||||||    
T  11202174 ggttaaaagtgaggaattgatgattagatgatgaaaaagtgttagattgatgtagaaaatgtgtacagaccttagataatcc 11202093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 20629495 - 20629617
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| |||||||||  ||||||||| |||||    
T  20629495 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-attgtaggtttagttt 20629593  T
Q  213 tt-agaattttagaattagggtta 235  Q
    || ||||||| |||||||||||||    
T  20629594 ttgagaatttgagaattagggtta 20629617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 55318498 - 55318540
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  55318498 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55318540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 24514342 - 24514219
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  24514342 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 24514244  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| | ||||||| ||||    
T  24514243 ttgagaatttgataattaggattaa 24514219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 325073 - 324951
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    |||||||||| ||| ||||| |||||| ||||||  ||||||||| |  ||| |||||||||||||||||  ||||  ||| |||||| |||||||| ||    
T  325073 atttaacatg-ttggaggtttagttttgagaattggagaattaggtt--aaagtgaagaattgatgattaattgatgaaaagttgttagattgatgtaga 324977  T
Q  287 aactgtgtacaaaccttagataatcc 312  Q
    |||| | |||| ||||||||||||||    
T  324976 aactatttacagaccttagataatcc 324951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 24514451 - 24514409
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  24514451 ttaaggttataaaaagagaaaagtgagaagtcataatagtttt 24514409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 55318607 - 55318730
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||| |||| |||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||| ||| |||||    
T  55318607 ccttacaattgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaagtttagttt 55318705  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  55318706 ttgagaatttgagaattagggttaa 55318730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 16828365 - 16828460
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    ||||||| |||||||||||||||| |||  | |||||||||||||| |  |||  |||| |||| |||| | |||| |||||||||||||||||||    
T  16828365 agaatttgagaattagggttaaaagtgataatttgatgattagatggtgaaaacgtgttgaattaatgtagtaactatgtacaaaccttagataat 16828460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 14967236 - 14967146
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| | | ||||||||| |||||||  |||| | ||||| ||||   |||||||||||||||||||||||||| |||||||||||    
T  14967236 taaggtaagggggggactaaccttcaataattctgagaatgtgattctgaggatgaatttaacatggttgtaggttgaggttttagaattt 14967146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 20629386 - 20629428
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  20629386 ttaaggttataaaaagataaaagtgagaagtcggaatagtttt 20629428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 9578484 - 9578419
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| ||||||||||||    
T  9578484 aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataat 9578419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 23412507 - 23412555
Alignment:
Q  264 gaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  23412507 gaaaattgttagattgatgtagaaactgtttacagaccttagataatcc 23412555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 12119185 - 12119291
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  12119185 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 12119283  T
Q  229 agggttaa 236  Q
    ||||||||    
T  12119284 agggttaa 12119291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 13522247 - 13522278
Alignment:
Q  176 tctgaaattgaatttaacatggttgtaggttg 207  Q
    ||||||||||||||||||||||||||||||||    
T  13522247 tctgaaattgaatttaacatggttgtaggttg 13522278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 15246900 - 15246833
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  15246900 aattgaggattagatgatggaaatttgtagaattgatgtagaaagtgtatacagaccttagataatcc 15246833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 22758885 - 22758971
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaa 267  Q
    |||||| |||||||||| ||||||||| |||||| || ||||  ||||||||||||||| |||  ||||| |||||| ||||| ||||    
T  22758885 aaattgtatttaacatg-ttgtaggtttagttttgaggatttgggaattagggttaaaagtgataaattgttgattatatgattgaaa 22758971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 45577655 - 45577781
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtagg-ttgagttttt-agaattttagaat 227  Q
    ||||||||| ||||||||||| | |||||||||| || || ||| |||| |||||| ||||||||| |||||||| || ||||||| |||||||  ||||    
T  45577655 taaggtaagggtgagactaacattcaataatcttaagtaattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 45577753  T
Q  228 tagggttaaaaatgaagaattgatgatt 255  Q
    ||||||||||| |||  | |||||||||    
T  45577754 tagggttaaaagtgattatttgatgatt 45577781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 13937295 - 13937400
Alignment:
Q  133 aaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatta 229  Q
    |||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||||||    
T  13937295 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatta 13937393  T
Q  230 gggttaa 236  Q
    |||||||    
T  13937394 gggttaa 13937400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 41124780 - 41124675
Alignment:
Q  133 aaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatta 229  Q
    |||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||||||    
T  41124780 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatta 41124682  T
Q  230 gggttaa 236  Q
    |||||||    
T  41124681 gggttaa 41124675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 21838291 - 21838246
Alignment:
Q  267 aattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||||| | ||||||||||||| ||||||||||||||    
T  21838291 aattgttagattgatttagaaactgtgtacagaccttagataatcc 21838246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 22109572 - 22109659
Alignment:
Q  223 agaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatc 311  Q
    ||||||||||||||| | || ||||||| |||||  ||||| | |||||||| |||||||| |||||||  || | |||||||||||||    
T  22109572 agaattagggttaaaga-gaggaattgaggattaattgatatagaattgttagattgatgtagaaactgcttatagaccttagataatc 22109659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 267
Target Start/End: Original strand, 43888813 - 43888892
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaa 267  Q
    |||||||||| ||||||||| |||||| || ||||  ||||||||||||||| |||  ||||| |||||| ||||| ||||    
T  43888813 atttaacatg-ttgtaggtttagttttgaggatttgggaattagggttaaaagtgataaattgttgattatatgattgaaa 43888892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 19616487 - 19616614
Alignment:
Q  176 tctgaaattgaatttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgat-gattagatgatagaaaattgtta 274  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||| |||||||||||||||| || |||||| || ||||||||||| ||||  ||||     
T  19616487 tctgaaattgaatttaacatggttgtaagttgaagttttagaatttgagaattagggttaaaattggagaattaatcgattagatgattgaaacatgttg 19616586  T
Q  275 aattgatgttgaaactgtgtacaaacct 302  Q
    ||||  | | ||||||||||||| ||||    
T  19616587 aattagtatagaaactgtgtacatacct 19616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 24473933 - 24473810
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  24473933 ccttgcaatcgatttcttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 24473835  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  24473834 ttgagaatttgagaattagggttaa 24473810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 234
Target Start/End: Complemental strand, 29330832 - 29330711
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  29330832 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 29330734  T
Q  213 tt-agaattttagaattagggtt 234  Q
    || ||||||| ||||||||||||    
T  29330733 ttgagaatttgagaattagggtt 29330711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 17516273 - 17516396
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| | |||    
T  17516273 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttatttt 17516371  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  17516372 ttgagaatttgagaattagggttaa 17516396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 23470630 - 23470563
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  |||| |||| |||| |||||||||||||||||||||||    
T  23470630 aattgaggattagatgatggaaacttgtagaattaatgtagaaagtgtgtacaaaccttagataatcc 23470563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 26732050 - 26732164
Alignment:
Q  197 gttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtac 296  Q
    |||||||||| |||||| ||||||  | |||||||||||| | ||| |||||||||  ||||||||  ||||||| | ||| ||||| |||| ||| |||    
T  26732050 gttgtaggtttagttttgagaattggaaaattagggttaagagtga-gaattgatggatagatgatgtaaaattgctgaatagatgtagaaagtgtatac 26732148  T
Q  297 aaaccttagataatcc 312  Q
    | ||||||||||||||    
T  26732149 agaccttagataatcc 26732164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 31062238 - 31062145
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatg 282  Q
    |||||||||| ||| || || |||||| ||||||  ||||||||| |||||| ||| ||||||||||||||||||| |||| ||||| ||||||||    
T  31062238 atttaacatg-ttggagatttagttttgagaattgaagaattagg-ttaaaagtgaggaattgatgattagatgatggaaacttgttgaattgatg 31062145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 24474042 - 24474000
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  24474042 ttaaggttacaaaaagagaaaagtgagaagtcggaatagtttt 24474000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 25573691 - 25573757
Alignment:
Q  246 attgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| ||||||||||||||    
T  25573691 attgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatcc 25573757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 25574926 - 25574992
Alignment:
Q  246 attgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| ||||||||||||||    
T  25574926 attgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatcc 25574992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 25576119 - 25576185
Alignment:
Q  246 attgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| ||||||||||||||    
T  25576119 attgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatcc 25576185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 2153951 - 2154058
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaat 227  Q
    |||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||||    
T  2153951 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaat 2154049  T
Q  228 tagggttaa 236  Q
    |||||||||    
T  2154050 tagggttaa 2154058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 21327525 - 21327592
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| ||||| || ||||||||||||||    
T  21327525 aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtccagaccttagataatcc 21327592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 22177459 - 22177526
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||  ||||  | |||||||| |||||||| |||||||| |||| ||||||||||||||    
T  22177459 aattgatgattaattgatgtagaattgttagattgatgtagaaactgtttacagaccttagataatcc 22177526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 26739863 - 26739977
Alignment:
Q  197 gttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtac 296  Q
    |||||||||| |||||| ||||||  | |||||||||||| | ||| |||||||||  ||||||||  | ||||| | ||| ||||| |||| ||| |||    
T  26739863 gttgtaggtttagttttgagaattggaaaattagggttaagagtga-gaattgatggatagatgatgtataattgctgaatggatgtagaaagtgtatac 26739961  T
Q  297 aaaccttagataatcc 312  Q
    | ||||||||||||||    
T  26739962 agaccttagataatcc 26739977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 27988198 - 27988284
Alignment:
Q  225 aattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||  || |||||||||||||| | | |  ||||| |||| |||||||| ||||||||||||| ||| ||||||||||    
T  27988198 aattagggttaaag-tgtagaattgatgattaaacggtgaaaaatagttagattgatgtagaaactgtgtacagaccctagataatcc 27988284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 38620384 - 38620258
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtagg-ttgagttttt-agaattttagaat 227  Q
    ||||||||| ||||||||||| | |||||||||| ||  | ||| |||| |||||| ||||||||| |||||||| || ||||||| ||||||| |||||    
T  38620384 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgagaat 38620286  T
Q  228 tagggttaaaaatgaagaattgatgatt 255  Q
    ||||||||||| |||  | |||||||||    
T  38620285 tagggttaaaagtgattatttgatgatt 38620258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 75082 - 75205
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    |||||||||| ||||||||| |||||| |||||||  ||||||||||||||| ||  |||||||||||||||||||  |||| |||| ||||||||| ||    
T  75082 atttaacatg-ttgtaggtttagttttgagaatttg-gaattagggttaaaagtggtgaattgatgattagatgatgaaaaactgttgaattgatgtaga 75179  T
Q  287 aactgtgtacaaaccttagataatcc 312  Q
    ||  ||||||| ||||||||||||||    
T  75180 aaaagtgtacagaccttagataatcc 75205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 1217 - 1094
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| ||||||||||||||||    
T  1217 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggttgagttt 1119  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  1118 ttgagaatttgagaattagggttaa 1094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 1327 - 1285
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1327 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 53; Significance: 4e-21; HSPs: 4)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 22683 - 22806
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| ||||||||||||||||    
T  22683 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggttgagttt 22781  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  22782 ttgagaatttgagaattagggttaa 22806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 20507 - 20630
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    ||||||||||||||||||| |||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  20507 ccttgcaatcgatttcttagggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggttcagttt 20605  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||||||||||| ||||||    
T  20606 ttgagaattttagaattaaggttaa 20630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 22573 - 22615
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22573 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 22615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 20397 - 20439
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  20397 ttaaggttataaaaagagaaaagtgagaagtcggaatagtttt 20439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 197 - 312
Target Start/End: Complemental strand, 9093 - 8977
Alignment:
Q  197 gttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgta 295  Q
    |||||||||| | ||||| |||||||  ||||||||||||||| ||| ||||||| ||||||||||| ||||| ||||| |||| ||| |||||| ||||    
T  9093 gttgtaggtttaatttttgagaatttgggaattagggttaaaagtgatgaattgaggattagatgatggaaaactgttagattgttgtagaaactatgta 8994  T
Q  296 caaaccttagataatcc 312  Q
    || ||||||||||||||    
T  8993 cagaccttagataatcc 8977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 1990 - 1900
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgatc-tgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| ||| ||||||||| |||||||  |||| | |||||  ||||  |||||||||||||||||||||||||| |||||||||||    
T  1990 taaggtaagggtgggactaaccttcaataattctgagtatgtgattatgaagatgaatttaacatggttgtaggttgaggttttagaattt 1900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 51; Significance: 6e-20; HSPs: 4)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 23112 - 22989
Alignment:
Q  187 atttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    |||||||||| ||||||||| ||||||| |||||||  ||||||||||||||| ||||||||||| |||||||| |  ||||| ||||| |||||||| |    
T  23112 atttaacatg-ttgtaggtt-agtttttgagaatttg-gaattagggttaaaagtgaagaattgaggattagataacggaaaactgttagattgatgtag 23016  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    ||| |||||||| ||||||||||||||    
T  23015 aaattgtgtacagaccttagataatcc 22989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 20700 - 20580
Alignment:
Q  118 tgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttttt- 214  Q
    ||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||||     
T  20700 tgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagtttttg 20602  T
Q  215 agaattttagaattagggttaa 236  Q
    ||||||| ||||||||||||||    
T  20601 agaatttgagaattagggttaa 20580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 14212 - 14133
Alignment:
Q  233 ttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||||||| |  ||||| ||||| |||||||| ||||||||||||| ||||||||||||||    
T  14212 ttaaaagtgaagaattgaggattagataacggaaaactgttagattgatgtagaaactgtgtacagaccttagataatcc 14133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 20812 - 20770
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  20812 ttaaggttataaaaagagaaaagtgagaagtcaaaatagtttt 20770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 22229 - 22138
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||||||||| ||||||||||||| |||||||  |||| | ||||| |||||||||||||||||||||||||||||| |  |||||||||||    
T  22229 ttaaggtaagggtgagactaaccttcaataattctgagtatgtgattctgaaattgaatttaacatggttgtaggttaaagttttagaattt 22138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 11941 - 11851
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||| |||| |||||||||||||||||||||  |||| | ||||| |||||  |||||||||||||||||||||||||| |||||||||||    
T  11941 taagataagggtgagactaacctccaataattatgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaattt 11851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 20959024 - 20958900
Alignment:
Q  187 atttaacatggttgtaggttgagtttttaga-attttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    |||||||||| ||| ||||| ||||||| || | |||| |||||||||||| | |||  |||||||||||||||||| |||| ||||  ||||||||| |    
T  20959024 atttaacatg-ttgaaggtttagttttttgagaatttaaaattagggttaagagtgat-aattgatgattagatgatggaaacttgtagaattgatgtag 20958927  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    ||| |||||||||||||||||||||||    
T  20958926 aaagtgtgtacaaaccttagataatcc 20958900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 16274556 - 16274679
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgatct--gaaattgaatttaacatggttgtaggttgagttt 212  Q
    ||||||||| |||||||||||||||| ||||||||||| | |||||||||||||    |||| |   |||||| ||||||||| |||||||||| |||||    
T  16274556 ccttgcaattgatttcttaaggtaagggtgagactaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagttt 16274654  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  16274655 ttgagaatttgagaattagggttaa 16274679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 16382030 - 16381906
Alignment:
Q  187 atttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    |||||||||| ||||||| | ||||||| || |||| |||||||||||||||  ||| |||||||||||||   |||  ||| |||||| |||||||| |    
T  16382030 atttaacatg-ttgtaggattagtttttgaggatttgagaattagggttaaag-tgaggaattgatgattaatggatgaaaagttgttagattgatgtag 16381933  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||| ||||||||||||||    
T  16381932 aaactgtgtacagaccttagataatcc 16381906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 21995664 - 21995754
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||| |||| ||| ||||||||| ||||||| ||||| | ||||| |||||  |||||||||||||||||||||||||| |||||||||||    
T  21995664 taagataagggtgggactaaccttcaataattttgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaattt 21995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 25262106 - 25262148
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25262106 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 25262148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 37524681 - 37524639
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37524681 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 37524639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 42314625 - 42314667
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42314625 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 42314667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 43543661 - 43543619
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43543661 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 43543619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 21683849 - 21683768
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||  |||||| ||||||||||| |||||||||  ||||||||| |||| ||| |||||||||||||||||||    
T  21683849 ggttaaaagtgatcaattgaggattagatgatggaaaattgtagaattgatgtagaaagtgtttacaaaccttagataatcc 21683768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 27652504 - 27652571
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||  ||||  |||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  27652504 aattgatgattaattgatgaaaaattgttagattgatgtagaaactgtgtacagaccttagataatcc 27652571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 310
Target Start/End: Complemental strand, 48521406 - 48521285
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    |||||||||| ||| ||||| |||||| ||||||  ||||||||| |||| | ||| |||||||||||||||||||  |||| ||||| ||| |||| ||    
T  48521406 atttaacatg-ttggaggtttagttttgagaattggagaattagg-ttaagagtgaggaattgatgattagatgatgaaaaagtgttacatttatgtaga 48521309  T
Q  287 aactgtgtacaaaccttagataat 310  Q
    || ||| |||| ||||||||||||    
T  48521308 aagtgtttacagaccttagataat 48521285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 21042562 - 21042685
Alignment:
Q  187 atttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    |||||||||| ||||||||| ||||||| |||| || | |||||||||||| | |||  ||||||||||||||||||  ||||||| | ||||||||| |    
T  21042562 atttaacatg-ttgtaggtttagtttttgagaaattga-aattagggttaagagtgat-aattgatgattagatgatgaaaaattgctgaattgatgtag 21042658  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    ||| ||||| || ||||||||||||||    
T  21042659 aaagtgtgttcagaccttagataatcc 21042685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 34770786 - 34770744
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  34770786 ttaaggttataaaaagagaaaagtgagaagtctgaatagtttt 34770744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 34770677 - 34770624
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgag 168  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    
T  34770677 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgag 34770624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 43543562 - 43543509
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgag 168  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    
T  43543562 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgag 43543509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 22777321 - 22777235
Alignment:
Q  225 aattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||| | ||| ||||||| |||||||||||  ||||||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  22777321 aattagggttaagagtga-gaattgaggattagatgatgaaaaattgtagaattgatgtagaaagtgtttacagaccttagataatcc 22777235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 42314734 - 42314787
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgag 168  Q
    |||||||||| ||||||||||||||| ||| ||||||| | |||||||||||||    
T  42314734 ccttgcaatccatttcttaaggtaagggtgggactaacattcaataatcttgag 42314787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 16093105 - 16093201
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||| |||||||||||||||  |||  |||||||| |||  ||||  ||| |||||| |||| ||| ||||||||||||| || |||||||||||    
T  16093105 agaatttgagaattagggttaaag-tgagaaattgatggttaattgatgaaaatttgttagattggtgtagaaactgtgtacagacattagataatcc 16093201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 21857228 - 21857269
Alignment:
Q  271 gttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||| |||||||| |||||||| |||||||||||||||||||    
T  21857228 gttagattgatgtagaaactgtttacaaaccttagataatcc 21857269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 35260416 - 35260461
Alignment:
Q  267 aattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||||||| |||||||| |||| ||||||||||||||    
T  35260416 aattgttagattgatgtagaaactgtttacataccttagataatcc 35260461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 36585 - 36705
Alignment:
Q  118 tgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttttt- 214  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||||     
T  36585 tgcaatcgatttcttaaggtaagtgtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttttta 36683  T
Q  215 agaattttagaattagggttaa 236  Q
    | ||||| ||||||||||||||    
T  36684 aaaatttgagaattagggttaa 36705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 307
Target Start/End: Complemental strand, 31160 - 30984
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagtttttagaattttagaatta 229  Q
    ||||||||| ||| ||||||||| |||||||  |||| | || || |||||| ||| |||||||| | ||||||||||   |||  ||||||  ||||||    
T  31160 taaggtaagggtgggactaaccttcaataattctgagtatgtaattctgaaaattggatttaacaag-ttgtaggttgtagtttgggaatttgggaatta 31062  T
Q  230 gggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagat 307  Q
    ||||||||| |    ||||| |||||||||||| |||| ||||| ||||||| | |||||||||||||||||||||||    
T  31061 gggttaaaagttgtaaattgttgattagatgatggaaatttgttgaattgatatagaaactgtgtacaaaccttagat 30984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 31693 - 31815
Alignment:
Q  187 atttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    |||||||||| ||||||||| | |||| ||||||| | |||||||||||| |  ||  ||||||||||||||||||| |||| |||| ||||||| | ||    
T  31693 atttaacatg-ttgtaggtttatttttgagaatttga-aattagggttaagagggat-aattgatgattagatgataaaaaactgttgaattgatataga 31789  T
Q  287 aactgtgtacaaaccttagataatcc 312  Q
    || |||||||||||||||||||||||    
T  31790 aagtgtgtacaaaccttagataatcc 31815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 6880 - 7003
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||| ||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  6880 ccttgcaatcaatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 6978  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  6979 ttgagaatttgagaattagggttaa 7003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 6771 - 6814
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagttttc 56  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  6771 ttaaggttataaaaagagaaaagtcagaagtcagaatagttttc 6814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 18796 - 18673
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  18796 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 18698  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||| | ||||||||||||||    
T  18697 ttgagaatctgagaattagggttaa 18673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 18905 - 18863
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  18905 ttaaggttataaaaagagaaaagtgagaagtcataatagtttt 18863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 6240 - 6363
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||| ||| ||||||||||| | |||||||||||||    ||| |||| |||||| ||||||||| ||||||| || |||||    
T  6240 ccttgcaatcgatttcttaaggaaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtagatttagttt 6338  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  6339 ttgagaatttgagaattagggttaa 6363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 6131 - 6173
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6131 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 6173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 10643 - 10766
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||||||    ||| |||| |||||| ||||||||| ||||||| ||  ||||    
T  10643 ccttgcaatcgatttcttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtagattttgttt 10741  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  10742 ttgagaatttgagaattagggttaa 10766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 10534 - 10576
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10534 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 10576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 10843 - 10720
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||||||    ||| |||| |||||| |||||||||  ||||||||| |||||    
T  10843 ccttgcaatcgatttcttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-attgtaggtttagttt 10745  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||| ||||    
T  10744 ttgagaatttgagaattaggcttaa 10720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 10952 - 10903
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatag-ttttcacgta 61  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10952 ttaaggttataaaaagagaaaagtgagaagtcagaatagcttttcacgta 10903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 107334 - 107211
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||| ||||||||| ||| ||||||| | |||||||||||||    ||| |||| |||||| ||||||||| |||||||||| |||||    
T  107334 ccttgcaatcgatttcataaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttt 107236  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  107235 ttgagaatttgagaattagggttaa 107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 107443 - 107401
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  107443 ttaaggttataaaaagagaaaagtgagaagtcagaatattttt 107401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 115944 - 115902
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  115944 ttaaggttataaaaagagaaaagtgagaagtcagaatattttt 115902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 115835 - 115782
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgag 168  Q
    |||||||||||||||| ||||||||| ||| ||||||| | |||||||||||||    
T  115835 ccttgcaatcgatttcataaggtaagggtgggactaacattcaataatcttgag 115782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 22031 - 21908
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||| ||||||||||||||| ||||||||||| | |||||||||||||    ||| | || |||||| ||||||||| |||||||||| |||||    
T  22031 ccttgcaatcaatttcttaaggtaagggtgagactaacattcaataatcttgagtctatgattgtgaaaattgtatttaacat-gttgtaggtttagttt 21933  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  21932 ttgagaatttgagaattagggttaa 21908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 28762 - 28875
Alignment:
Q  197 gttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtac 296  Q
    |||||||||| |||||| ||||||  | |||||||||||| | |||  |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||    
T  28762 gttgtaggtttagttttgagaattgga-aattagggttaagagtgat-aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtac 28859  T
Q  297 aaaccttagataatcc 312  Q
    ||||||||||||||||    
T  28860 aaaccttagataatcc 28875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 1676 - 1634
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1676 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 1634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 1567 - 1514
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgag 168  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    
T  1567 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgag 1514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 5349 - 5259
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||  |||||||||||||||||||||||||| |||||||||||    
T  5349 taaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaattt 5259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 12369 - 12279
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||  |||||||||||||||||||||||||| |||||||||||    
T  12369 taaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaattt 12279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 191855 - 191978
Alignment:
Q  187 atttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    |||||||||| ||||||||| ||||||| ||||||| | |||||||||||| | |||  |||||||| |||||||||  |||| || | ||||||||| |    
T  191855 atttaacatg-ttgtaggtttagtttttgagaatttga-aattagggttaagagtgat-aattgatgcttagatgatgaaaaactgctgaattgatgtag 191951  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    ||| |||||||||||||||||||||||    
T  191952 aaagtgtgtacaaaccttagataatcc 191978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 86400 - 86332
Alignment:
Q  244 gaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||  ||||  ||| |||||| |||||||| |||||||| |||||||||||||||||||    
T  86400 gaattgatgattaattgatgaaaagttgttagattgatgtagaaactgtttacaaaccttagataatcc 86332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 16327 - 16204
Alignment:
Q  188 tttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttga 286  Q
    ||||||||| ||||||||| ||||||| |||||||  |||||||| |||||| |||  |||||| ||||||||||| |||||||||  |||| |||| ||    
T  16327 tttaacatg-ttgtaggtttagtttttgagaatttgggaattagg-ttaaaagtgatcaattgaggattagatgatggaaaattgtagaattaatgtaga 16230  T
Q  287 aactgtgtacaaaccttagataatcc 312  Q
    ||||  ||||| ||||||||||||||    
T  16229 aactaagtacagaccttagataatcc 16204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 25365 - 25453
Alignment:
Q  223 agaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||| | |||  |||||| |||||||||||||||| ||||  ||||||||| |||| |||||||| ||||||||||||||    
T  25365 agaattagggttaagagtgat-aattgaggattagatgatagaaacttgtagaattgatgtagaaagtgtgtacataccttagataatcc 25453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 16178 - 16266
Alignment:
Q  223 agaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||| | |||  |||||| || |||||||| |||| ||||  ||||||||| |||| |||||||| ||||||||||||||    
T  16178 agaattagggttaagagtgat-aattgaggactagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatcc 16266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 68352 - 68259
Alignment:
Q  129 tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaattgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||||||||||| ||| ||||||||| |||||||  |||| | ||||| |||||  |||||||||||||| ||||||||||| |||||||||||    
T  68352 tcttaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaagatgaatttaacatggctgtaggttgaggttttagaattt 68259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 2014 - 1938
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagat 307  Q
    |||||||| |||  |||||||||||||||||| |||| ||||  ||||||||| ||||||||||||| |||||||||    
T  2014 ggttaaaagtgataaattgatgattagatgatggaaacttgtagaattgatgtagaaactgtgtacagaccttagat 1938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 5539 - 5430
Alignment:
Q  129 tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttaga 225  Q
    |||||||||||| ||| || |||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||    
T  5539 tcttaaggtaagggtgggaataacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgaga 5441  T
Q  226 attagggttaa 236  Q
    |||||||||||    
T  5440 attagggttaa 5430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 685 - 562
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttt 212  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||||| ||     ||| |||| |||||| |||||| || |||||||||| |||||    
T  685 ccttgcaatcgatttcttaaggtaagggtgagactaacattcaataatctcgactctatgattctgaaaattgtatttaatat-gttgtaggtttagttt 587  T
Q  213 tt-agaattttagaattagggttaa 236  Q
    || ||||||| ||||||||||||||    
T  586 ttgagaatttgagaattagggttaa 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 795 - 752
Alignment:
Q  13 ttaaggttataaaaag-agaaaagtgagaagtcagaatagtttt 55  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  795 ttaaggttataaaaaggagaaaagtgagaagtcagaatagtttt 752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 951 - 828
Alignment:
Q  187 atttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    ||||||||||  |||||||| ||||||| || |||| |||||||||||||||  |||||||||||||||||  ||||  |||| |||  |||| |||| |    
T  951 atttaacatg--tgtaggtttagtttttgaggatttgagaattagggttaaag-tgaagaattgatgattaattgatgaaaaactgtagaatttatgtag 855  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    ||||| |||||| ||||||||||||||    
T  854 aaactttgtacagaccttagataatcc 828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 18 - 131
Alignment:
Q  197 gttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtac 296  Q
    |||||||||| |||||| ||||||  | |||||||||||| | |||  |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||    
T  18 gttgtaggtttagttttgagaattgga-aattagggttaagagtgat-aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtac 115  T
Q  297 aaaccttagataatcc 312  Q
    | ||||||||||||||    
T  116 agaccttagataatcc 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 4860 - 4737
Alignment:
Q  187 atttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    |||||||| ||||||||| | ||||||| ||||||| ||||||||| |  ||| |||  ||||||||||||  ||||  |||||||||| |||||||| |    
T  4860 atttaaca-ggttgtaggattagtttttgagaatttgagaattaggtt--aaagtgagaaattgatgattaattgatgaaaaattgttagattgatgtag 4764  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||| |||||||| |||||    
T  4763 aaactgtgtacagaccttagacaatcc 4737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 14010 - 13943
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| |||||  ||||| | |||||||| |||||||| |||||||| |||| ||||||||||||||    
T  14010 aattgaggattaattgatatagaattgttagattgatgtagaaactgtttacagaccttagataatcc 13943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 33726 - 33849
Alignment:
Q  187 atttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    |||||||| ||||||||| | ||||||| ||||||| ||||||||| |  ||| |||  ||||||||||||  ||||  |||||||||| |||||||| |    
T  33726 atttaaca-ggttgtaggattagtttttgagaatttgagaattaggtt--aaagtgagaaattgatgattaattgatgaaaaattgttagattgatgtag 33822  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||| |||||||| |||||    
T  33823 aaactgtgtacagaccttagacaatcc 33849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 203607 - 203721
Alignment:
Q  197 gttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtac 296  Q
    |||||||||| |||||| ||||||  | ||||||| |||||| |||  |||||| ||||||||||| |||||||||  ||||| ||| |||| ||| |||    
T  203607 gttgtaggtttagttttgagaattggaaaattagg-ttaaaactgataaattgaggattagatgatggaaaattgtagaattggtgtagaaagtgtttac 203705  T
Q  297 aaaccttagataatcc 312  Q
    | ||||||||||||||    
T  203706 agaccttagataatcc 203721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 2113 - 2063
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaacctccaataatctt 165  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  2113 ccttgcaatcgatttcttaaggtaagggtgagactaacattcaataatctt 2063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 1155 - 1197
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  1155 ttaaggttataaaaagagaaaagtgagaagtcataatagtttt 1197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 1264 - 1300
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaa 151  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1264 ccttgcaatcgatttcttaaggtaagggtgagactaa 1300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 70 - 112
Alignment:
Q  13 ttaaggttataaaaagagaaaagtgagaagtcagaatagtttt 55  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  70 ttaaggttataaaaaaagaaaagtgagaagtcagaatagtttt 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 179 - 216
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaac 152  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  179 ccttgcaatcgatttcttaaggtaagggtgggactaac 216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 129 - 236
Target Start/End: Original strand, 16757 - 16866
Alignment:
Q  129 tcttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttaga 225  Q
    |||||||||||| ||||||||||| | |||||||||||||    |||| || ||| ||| |||||||||| ||||||||||||||||| ||||||| |||    
T  16757 tcttaaggtaagggtgagactaacattcaataatcttgagtctatgattctaaaaattgtatttaacatg-ttgtaggttgagtttttgagaatttgaga 16855  T
Q  226 attagggttaa 236  Q
    |||||||||||    
T  16856 attagggttaa 16866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 220401 - 220512
Alignment:
Q  200 gtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaa 298  Q
    ||||||| ||||||| ||||||| | |||||||||||| | |||  ||||||||||||||||||  |||| |||| ||||||||| |||| ||| ||||     
T  220401 gtaggtttagtttttgagaatttga-aattagggttaagagtgat-aattgatgattagatgatgtaaaactgttgaattgatgtagaaagtgtatacag 220498  T
Q  299 accttagataatcc 312  Q
    ||||||||||||||    
T  220499 accttagataatcc 220512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 165716 - 165797
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||  |||||| ||||| ||||| |||| ||||  ||||||||| ||||||||||||| ||||||||||||||    
T  165716 ggttaaaagtgatcaattgaggattaaatgatggaaacttgtagaattgatgtagaaactgtgtacagaccttagataatcc 165797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 268487 - 268442
Alignment:
Q  267 aattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||||    
T  268487 aattgttagattgatgtagaaactgtgtacagaccttagataatcc 268442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 7627 - 7520
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctga-aattgaatttaacatggttgtaggttgagttttt-agaattttagaat 227  Q
    |||||||||| ||||||||||| | |||||||||||||    |||| |||| ||||| |||||||||| ||||||||| ||||||| ||||||| |||||    
T  7627 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgagaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaat 7529  T
Q  228 tagggttaa 236  Q
    |||||||||    
T  7528 tagggttaa 7520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 1552 - 1429
Alignment:
Q  187 atttaacatggttgtaggttgagttt-ttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttg 285  Q
    |||||||||| ||||||||| ||||| ||||||||  | |||||||||||| | |||  |||||| ||||||||||| |||| ||||  ||||||||| |    
T  1552 atttaacatg-ttgtaggtttagtttattagaattgga-aattagggttaagagtgat-aattgaggattagatgatggaaacttgtagaattgatgtgg 1456  T
Q  286 aaactgtgtacaaaccttagataatcc 312  Q
    ||| |||||||| |||||| |||||||    
T  1455 aaagtgtgtacagaccttatataatcc 1429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 34 - 142
Alignment:
Q  130 cttaaggtaagtgtgagactaacctccaataatcttgagcaagtga-tctg-aaattgaatttaacatggttgtaggttgagttttt-agaattttagaa 226  Q
    ||||||||||| ||| ||||||| | |||||||||||||   |||| |||| |||||| ||||||||| |||||||||| ||||||| | ||||| ||||    
T  34 cttaaggtaagggtgggactaacattcaataatcttgagtctgtgattctgaaaattgtatttaacat-gttgtaggtttagtttttgaaaatttgagaa 132  T
Q  227 ttagggttaa 236  Q
    ||||||||||    
T  133 ttagggttaa 142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 13636 - 13599
Alignment:
Q  184 tgaatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||||||||||||||||||||||||| |||||||||||    
T  13636 tgaatttaacatggttgtaggttgaggttttagaattt 13599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 57742 - 57661
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||  |||||| ||||||||||| |||| ||||  |||| |||| |||| |||||||| ||||||||||||||    
T  57742 ggttaaaagtgatcaattgaggattagatgatggaaacttgtataattaatgtagaaattgtgtacagaccttagataatcc 57661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 12401 - 12345
Alignment:
Q  176 tctgaaattgaatttaacatggttgtaggttg-agtttttagaattttagaattagg 231  Q
    |||||||||||||||||||||||||||||||| ||||||   ||||| |||||||||    
T  12401 tctgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattagg 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 14438 - 14378
Alignment:
Q  252 gattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||  |||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  14438 gattagttgatgaaaaattgttagattgatgtagaaactgtttacagaccttagataatcc 14378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 34339 - 34232
Alignment:
Q  131 ttaaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaat 227  Q
    |||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| |||||    
T  34339 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaat 34241  T
Q  228 tagggttaa 236  Q
    |||||||||    
T  34240 tagggttaa 34232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 209833 - 209741
Alignment:
Q  218 attttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataat 310  Q
    |||| |||||||||||||||| ||| || ||| ||||||||||||  |||  |||| |||| ||||  ||| |||||||| ||||||||||||    
T  209833 atttgagaattagggttaaaagtgatgatttggtgattagatgatgaaaacgtgttgaattaatgtaaaaattgtgtacagaccttagataat 209741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 146 - 79
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| |||||||| || |||||||||||    
T  146 aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagactttagataatcc 79  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 7293 - 7187
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttgagttttt-agaattttagaatt 228  Q
    ||||||||| ||| ||||||| | |||||||||||||    |||| |||||| ||| |||||||||| ||||||||| ||||||| ||||||| ||||||    
T  7293 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaatt 7195  T
Q  229 agggttaa 236  Q
    ||||||||    
T  7194 agggttaa 7187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 468 - 401
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||| | |||| ||||  ||||||||| |||| |||||||| ||||||||||||||    
T  468 aattgaggattagatggtggaaacttgtggaattgatgtagaaagtgtgtacataccttagataatcc 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 9739 - 9672
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||| ||||||||||| |||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  9739 aattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtttacagaccttagataatcc 9672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 17448 - 17515
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||||||||   ||| || | ||||||||| |||| |||||||| ||||||||||||||    
T  17448 aattgatgattagatgatgagaaactgctgaattgatgtagaaagtgtgtacagaccttagataatcc 17515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 17601 - 17648
Alignment:
Q  265 aaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  17601 aaaattgttagattgatgtagaaactgtttacagaccttagataatcc 17648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 21699 - 21573
Alignment:
Q  132 taaggtaagtgtgagactaacctccaataatcttgagcaagtgat-ctgaaa-ttgaatttaacatggttgtaggttg-agttttt-agaattttagaat 227  Q
    ||||||||| ||| ||||||| | |||||||||| ||  | |||| |||||| ||| |||||||||| |||||||||  ||||||| ||||||| |||||    
T  21699 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatg-ttgtaggttttagtttttgagaatttgagaat 21601  T
Q  228 tagggttaaaaatgaagaattgatgatt 255  Q
    ||||||||||| |||  |||||||||||    
T  21600 tagggttaaaagtgattaattgatgatt 21573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 221
Target Start/End: Complemental strand, 10733 - 10698
Alignment:
Q  186 aatttaacatggttgtaggttgagtttttagaattt 221  Q
    |||||||||||||||||||||||| |||||||||||    
T  10733 aatttaacatggttgtaggttgaggttttagaattt 10698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 29547 - 29500
Alignment:
Q  265 aaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  29547 aaaattgttagattgatgtagaaactgtttacagaccttagataatcc 29500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 120955 - 120869
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaa 267  Q
    |||||| |||||||||| ||||||||| |||||| || ||||  ||||||||||||||| |||  ||||| |||||| ||||| ||||    
T  120955 aaattgtatttaacatg-ttgtaggtttagttttgaggatttgtgaattagggttaaaagtgataaattgttgattatatgattgaaa 120869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 3173 - 3228
Alignment:
Q  251 tgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttaga 306  Q
    |||||| ||| ||||||  |||| ||||||||| ||||||||||||||||||||||    
T  3173 tgattaaatggtagaaatctgttgaattgatgtagaaactgtgtacaaaccttaga 3228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 25966 - 25871
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||| ||||||||| |  ||| ||| |||||| ||||||  ||||  |||||||||| ||||||||  ||||||| |||| ||||||||||||||    
T  25966 agaatttgagaattaggtt--aaagtgaggaattggtgattaattgatgaaaaattgttagattgatgtaaaaactgtttacagaccttagataatcc 25871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 126792 - 126711
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagtttttagaattttagaattagggttaaaaatgaagaattgatgattagatgat 262  Q
    |||||| |||||||||| ||| ||||| |||||| || | ||  |||||||||||||||||||  |||||||||||| |||||    
T  126792 aaattgtatttaacatg-ttgcaggtttagttttgaggacttgggaattagggttaaaaatgataaattgatgattatatgat 126711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 37381 - 37462
Alignment:
Q  231 ggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| |||  |||||| ||||||||||| |||| ||||  ||||||||| |||| ||| |||| || |||||||||||    
T  37381 ggttaaaagtgattaattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtatacagacattagataatcc 37462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 305
Target Start/End: Complemental strand, 2175 - 2058
Alignment:
Q  187 atttaacatggttgtaggttgagttttt-agaattttagaattagggttaaaaatgaagaattgatgattagatgat-agaaaattgttaaattgatgtt 284  Q
    |||||||| ||||||||| | ||||||| ||||||| ||||||||| |  ||| |||  ||||||| ||||  |||| | |||||||||| ||||||||     
T  2175 atttaaca-ggttgtaggattagtttttgagaatttgagaattaggtt--aaagtgagaaattgataattaattgatgaaaaaattgttagattgatgta 2079  T
Q  285 gaaactgtgtacaaaccttag 305  Q
    ||||||||||||| |||||||    
T  2078 gaaactgtgtacagaccttag 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 1433 - 1401
Alignment:
Q  189 ttaacatggttgtaggttgagtttttagaattt 221  Q
    ||||||||||||||||||||| |||||||||||    
T  1433 ttaacatggttgtaggttgaggttttagaattt 1401  T

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Target: scaffold0621 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 9371 - 9283
Alignment:
Q  223 agaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||||||||||| | || ||||||| |||||  ||||  |||||  ||| |||||||| |||||||| ||||||||||| |||||||    
T  9371 agaattagggttaaaga-gaggaattgaggattaattgatgtaaaatgattagattgatgtagaaactgtttacaaaccttacataatcc 9283  T

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Target: scaffold0319 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 6113 - 6057
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagttttt-agaattttagaattagggttaa 236  Q
    |||||| |||||||||| ||||||||| ||||||| ||||||| ||||||||||||||    
T  6113 aaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaattagggttaa 6057  T

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Target: scaffold0278 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 8724 - 8668
Alignment:
Q  180 aaattgaatttaacatggttgtaggttgagttttt-agaattttagaattagggttaa 236  Q
    |||||| |||||||||| ||||||||| ||||||| ||||||| ||||||||||||||    
T  8724 aaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaattagggttaa 8668  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 58677 - 58608
Alignment:
Q  243 agaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||| ||||| ||||| |||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  58677 agaattgaggattaaatgatggaaacttgtagaattgatgtagaaagtgtttacagaccttagataatcc 58608  T

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Target: scaffold0072; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 62441 - 62509
Alignment:
Q  244 gaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    |||||||||||||  ||||  ||| |||||| |||||||| |||| ||| |||| ||||||||||||||    
T  62441 gaattgatgattaattgatgaaaagttgttagattgatgtagaaattgtttacagaccttagataatcc 62509  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 128182 - 128277
Alignment:
Q  215 agaattttagaattagggttaaaaatgaagaattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatcc 312  Q
    ||||||| |||||||| ||||| | ||| ||||||||||||||||| |  ||| ||||  ||||||||| |||| ||| |||| ||||||||||||||    
T  128182 agaatttgagaattagagttaagagtga-gaattgatgattagatggtgaaaacttgtagaattgatgtagaaagtgt-tacataccttagataatcc 128277  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 160279 - 160316
Alignment:
Q  115 ccttgcaatcgatttcttaaggtaagtgtgagactaac 152  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  160279 ccttgcaatcgatttcttaaggtaagggtgggactaac 160316  T

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Target: scaffold1403 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 1379 - 1311
Alignment:
Q  245 aattgatgattagatgatagaaaattgttaaattgatgttgaaactgtgtacaaaccttagataatccg 313  Q
    ||||||||||||  ||||  | |||||||| |||||||| |||||||| |||| |||||||||| ||||    
T  1379 aattgatgattaattgatgtagaattgttagattgatgtagaaactgtttacagaccttagatagtccg 1311  T

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