View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4639_low_3 (Length: 251)
Name: NF4639_low_3
Description: NF4639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4639_low_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 251
Target Start/End: Original strand, 47938020 - 47938264
Alignment:
| Q |
19 |
gaactaatggctaatcttgattaccaaacacctcatcgtggtcaactcttaaatgatcagaccattacttcaattagctgactcagttccaacaaaaacc |
118 |
Q |
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| T |
47938020 |
gaactaatggctaatcttgattaccaaacacctcatcgtggtcaactcttaaatgatcagaccattacttcaattagctgactcagttccaacaaaaacc |
47938119 |
T |
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| Q |
119 |
ctccatcgtcaaaaaagtcatttggg------------tttattttagtgagtaatgttgggtttatctttcattcatactagacagaaaattacccatc |
206 |
Q |
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| T |
47938120 |
ctccatcgtcaaaaaagtcatttgggtttagctcaacttttattttagtgagtaatgttgggtttatctttcattcatactagacagaaaattacccatc |
47938219 |
T |
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| Q |
207 |
caaacactaatttcaacatataagaaaccccaaagtccctaattt |
251 |
Q |
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| T |
47938220 |
caaacactaatttcaacatataagaaaccccaaagtccctaattt |
47938264 |
T |
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