View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4639_low_4 (Length: 244)
Name: NF4639_low_4
Description: NF4639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4639_low_4 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 17779449 - 17779692
Alignment:
| Q |
1 |
tactcattaccatttggtaattaccaatatgataataatgcattggttaaggtaccttataatgttaatgtgaatgtgcctcgtattgatgaacaagaat |
100 |
Q |
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| T |
17779449 |
tactcattaccatttggtaattaccaatatgataataatgcattggttaaggtaccttataatgttaatatgaatgtgcctcgtattgatgaacaagaat |
17779548 |
T |
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| Q |
101 |
tgatgaatttcaatattggtgatgcatggaagtcaaatttgctttgggatacttcattttgtcctattgatgttccctctagttattcaataaccaagtg |
200 |
Q |
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| T |
17779549 |
tgatgaatttcaatattggtgatgcatggaagtcaaatttgctttgggatacttcattttgtcctattgatgttccctctagttattcaacaaccaagtg |
17779648 |
T |
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| Q |
201 |
ttacacttaatttgtaccttttatttttacataagtataatcta |
244 |
Q |
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| T |
17779649 |
ttacacttaatttgtaccttttatttttacataagtagaatcta |
17779692 |
T |
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