View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4640-Insertion-4 (Length: 602)
Name: NF4640-Insertion-4
Description: NF4640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4640-Insertion-4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 560; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 560; E-Value: 0
Query Start/End: Original strand, 7 - 602
Target Start/End: Complemental strand, 32641954 - 32641359
Alignment:
| Q |
7 |
agcaactgcaaaaaccatcctcaccaccgccgcctccatagccggcaccgccatgttaatccgttccgtcgccaacgagtttctcccaatggacatccgt |
106 |
Q |
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| T |
32641954 |
agcaaccgcaaaaaccatcctcaccaccgccgcctccatagccggcaccgccatgttaatccgttctgtcgccaacgagtttctcccaatggacatccgt |
32641855 |
T |
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| Q |
107 |
gacatcgtcttcaccggaatcaaatccgcttactgtcgtttctccaccgacgtaacaatggtgatagaagaatttgaaggccttgacaataaccaaatct |
206 |
Q |
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| T |
32641854 |
gacatcgtcttcaccggaatcaaatccgcttactgtcgtttctccaccaacgtaacaatggtgatagaagaattcgaaggccttgacaataaccaaatct |
32641755 |
T |
|
| Q |
207 |
actccgctgcagaaacttatctcggcaccatagtttcaccttcaacaaaacgcttccgtataagcaaatccgatcatcaacaaacttttactcttacaat |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32641754 |
actccgctgcagaaacttatctcggcaccatagtttcaccttcaacaaaacgcttccgtataagcaaatccgatcatcaacaaacttttactcttacaat |
32641655 |
T |
|
| Q |
307 |
ggagcgtgatcaattggtaactgattatttcaacggcgttaaactgaagtggattctcttttctcgtcgcattgaaaatcttcgcaacaaccgtgattta |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |
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| T |
32641654 |
ggagcgtgatcaattggtaactgattatttcaacggcgttaaactgaagtggattctcttttctcgccgcgttgaaaatcttcgcaacaaccgtgattta |
32641555 |
T |
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| Q |
407 |
accgttccgatgaagtcagaagtacgttcattggagttaactttcaacagaaaatacaaggagctggttctaaaaagctacattccttttattctcgaaa |
506 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
32641554 |
accgttccgatgaagtcagaagtacgttcattggagttaactttcaacagaaaatacaaggagatggttctaaaaagctacattccttttattctcgaaa |
32641455 |
T |
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| Q |
507 |
aagcaagatcgaagaaacaagaagtgagagcattgaagatattcaccattgatatacagaatctatatgggaatcttaacgacgcatggctgggga |
602 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
32641454 |
aagcaagatcgaagaaacaagaagtgaaagcattgaagatattcaccattgatatacagaatctatatgggaatcttaacgacgcgtggctgggga |
32641359 |
T |
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