View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4640_low_5 (Length: 249)
Name: NF4640_low_5
Description: NF4640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4640_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 37624813 - 37625042
Alignment:
| Q |
1 |
ctataactatttgagtctatctattggtgtcattggtaaatatatcatgtatgcaattttagcacctaccacctattagaatatcattggcatcatttta |
100 |
Q |
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| T |
37624813 |
ctataactatttgagtctatctattggtgtcattggtaaatatatcatgtatgcaattttagcacctaccacctattagaatatcattggcatcatttta |
37624912 |
T |
|
| Q |
101 |
ttagca-ttttttatgtgactatcattttaggaaataattaaacaatcatgatcttaattgaccataattagaaatataataagatttg-ttggtataca |
198 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
37624913 |
ttagcatttttttatgtgactatcattttaggaaataattaaacaatcatgatcttaattgaccataattagaaatataataagatttgattggtttaca |
37625012 |
T |
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| Q |
199 |
tcagaaaaatattgaatgagggaggctgct |
228 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
37625013 |
tcagaaaaatattgaatgagggaggctgct |
37625042 |
T |
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