View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4641_high_2 (Length: 212)
Name: NF4641_high_2
Description: NF4641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4641_high_2 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 28191107 - 28190896
Alignment:
| Q |
1 |
tacatcaaataaatgtctctgtctttgttctgcatcatttgactttgttattgttctgttttcacgttgtagaatttttattaaaatatttcaatgaagt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
28191107 |
tacatcaaataaatgtctctgtctttgttctgcatcatttgactttgttattgttctgttttcatgttgtagaatttttattaaaatatttcaatgaagt |
28191008 |
T |
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| Q |
101 |
aaactaagtcaaaactaaagtgtaatactgagatagataataccttaaagtattaaattcaccccaacaagctgcttctgaaatcatggtgggaggaatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
28191007 |
aaactaagtcaaaactaaagtgtaatactgagatagataataccttaaagtattaaattcaccccaacaagctgcttctgaaatcatggtgagaggaatg |
28190908 |
T |
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| Q |
201 |
tggaaagcttct |
212 |
Q |
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|||||||||||| |
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| T |
28190907 |
tggaaagcttct |
28190896 |
T |
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