View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4642_high_12 (Length: 312)
Name: NF4642_high_12
Description: NF4642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4642_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 23368808 - 23369098
Alignment:
| Q |
1 |
acatacattgatgcaatatgtagtgccgcaagttctaaatacaaccaaaaagggacaaaaaactagagttcaaaagagaaggagatttaaagagcttcct |
100 |
Q |
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| T |
23368808 |
acatacactgatgcaatatgtagtgccgctagttctaaatacaaccaaaaagggacaaaaaactagagttcaaaagagaaggagatttaaagagcttcct |
23368907 |
T |
|
| Q |
101 |
attacaagacttaattttgattcagtatttgaagaaggtggtccatcatcaaactcatcagccaatggtaattgttgaatattcaactttctatattaca |
200 |
Q |
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| T |
23368908 |
attacaagacttaattttgattcattatttgaagaaggtggtccatcatcaaactcatcagccaatggtaattgttgaatattcaactttctatattaca |
23369007 |
T |
|
| Q |
201 |
caaataatagttaaattaatacactgcctaacaggggttaatcaaggaaattgcaatttggatgccttgaaagtagctatatatgatgatg |
291 |
Q |
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||||||||||||||||||||||| ||||||||| | |||||| ||| |||||| |||||||||||||| ||||||| |||||||||||||| |
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| T |
23369008 |
caaataatagttaaattaatacattgcctaacatgtgttaattaagaaaattgtaatttggatgccttcaaagtagatatatatgatgatg |
23369098 |
T |
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