View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4644-Insertion-11 (Length: 507)

Name: NF4644-Insertion-11
Description: NF4644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4644-Insertion-11
NF4644-Insertion-11
[»] chr7 (56 HSPs)
chr7 (10-271)||(43460661-43460922)
chr7 (8-207)||(32255004-32255204)
chr7 (8-159)||(32256347-32256496)
chr7 (19-190)||(11502340-11502512)
chr7 (8-207)||(47454352-47454549)
chr7 (19-253)||(47059134-47059372)
chr7 (19-190)||(13564158-13564329)
chr7 (8-104)||(6173455-6173551)
chr7 (19-193)||(30334559-30334727)
chr7 (8-105)||(33096884-33096981)
chr7 (8-103)||(47456381-47456476)
chr7 (19-190)||(22336005-22336176)
chr7 (95-207)||(40811422-40811534)
chr7 (16-169)||(40509675-40509827)
chr7 (11-169)||(22115105-22115262)
chr7 (29-268)||(22537595-22537832)
chr7 (414-507)||(43460477-43460569)
chr7 (8-121)||(45455360-45455473)
chr7 (16-103)||(30333308-30333395)
chr7 (8-103)||(32602948-32603043)
chr7 (16-190)||(43459478-43459650)
chr7 (17-103)||(4300054-4300140)
chr7 (16-105)||(40508401-40508490)
chr7 (9-104)||(30310137-30310232)
chr7 (8-167)||(41078771-41078930)
chr7 (129-252)||(41328354-41328477)
chr7 (19-159)||(11501206-11501344)
chr7 (129-253)||(16756006-16756129)
chr7 (136-204)||(35295841-35295909)
chr7 (19-178)||(47060408-47060565)
chr7 (16-103)||(4298736-4298823)
chr7 (129-207)||(44372864-44372942)
chr7 (129-207)||(44381720-44381798)
chr7 (19-105)||(45454064-45454150)
chr7 (16-105)||(3414838-3414927)
chr7 (22-190)||(22337292-22337457)
chr7 (129-207)||(669292-669369)
chr7 (129-207)||(39981452-39981530)
chr7 (8-193)||(46835690-46835875)
chr7 (8-180)||(41079766-41079935)
chr7 (129-193)||(46201266-46201330)
chr7 (129-252)||(43441481-43441604)
chr7 (17-62)||(11344531-11344576)
chr7 (10-103)||(35664287-35664380)
chr7 (19-103)||(22538854-22538938)
chr7 (16-87)||(33779106-33779177)
chr7 (8-47)||(40811355-40811394)
chr7 (156-252)||(48312202-48312299)
chr7 (129-187)||(15992270-15992328)
chr7 (64-121)||(24844332-24844389)
chr7 (16-57)||(30311521-30311562)
chr7 (141-193)||(2414892-2414944)
chr7 (16-122)||(3413555-3413662)
chr7 (19-57)||(24844402-24844440)
chr7 (16-57)||(24281097-24281138)
chr7 (19-76)||(40812646-40812703)
[»] chr2 (37 HSPs)
chr2 (8-271)||(32469163-32469427)
chr2 (8-271)||(11317205-11317469)
chr2 (8-271)||(42641698-42641961)
chr2 (10-193)||(43033099-43033280)
chr2 (8-180)||(43034400-43034572)
chr2 (9-207)||(6030372-6030570)
chr2 (9-210)||(17459269-17459471)
chr2 (19-190)||(29219411-29219583)
chr2 (19-190)||(29332710-29332882)
chr2 (19-252)||(18616862-18617096)
chr2 (19-190)||(1085307-1085476)
chr2 (13-137)||(7437733-7437857)
chr2 (8-120)||(28562798-28562910)
chr2 (8-121)||(7436482-7436594)
chr2 (19-159)||(17460636-17460774)
chr2 (129-252)||(4920917-4921039)
chr2 (16-180)||(11315956-11316118)
chr2 (414-507)||(32469570-32469662)
chr2 (8-102)||(28561383-28561477)
chr2 (16-204)||(11547682-11547870)
chr2 (19-208)||(35903534-35903721)
chr2 (16-139)||(32470547-32470668)
chr2 (129-251)||(28611112-28611233)
chr2 (149-207)||(30748634-30748692)
chr2 (16-103)||(36011648-36011734)
chr2 (162-207)||(16290697-16290742)
chr2 (8-76)||(2277502-2277570)
chr2 (9-97)||(36010593-36010681)
chr2 (9-104)||(12359684-12359779)
chr2 (129-231)||(30749202-30749305)
chr2 (129-204)||(34513459-34513534)
chr2 (19-102)||(44192453-44192536)
chr2 (132-202)||(8320895-8320965)
chr2 (19-104)||(6030631-6030716)
chr2 (19-103)||(34468984-34469068)
chr2 (8-57)||(34147151-34147200)
chr2 (94-193)||(34464069-34464167)
[»] chr3 (57 HSPs)
chr3 (7-271)||(38242353-38242618)
chr3 (9-193)||(34819201-34819384)
chr3 (9-123)||(18197163-18197277)
chr3 (19-202)||(3208510-3208693)
chr3 (28-190)||(10732048-10732210)
chr3 (17-139)||(53194841-53194962)
chr3 (19-190)||(41264572-41264743)
chr3 (8-212)||(53624261-53624462)
chr3 (19-190)||(53614192-53614363)
chr3 (9-231)||(12107857-12108083)
chr3 (8-204)||(40244202-40244395)
chr3 (16-121)||(53187582-53187686)
chr3 (19-190)||(35370939-35371104)
chr3 (19-122)||(34818112-34818215)
chr3 (132-271)||(53194451-53194590)
chr3 (9-101)||(37736089-37736181)
chr3 (16-103)||(18458663-18458750)
chr3 (8-103)||(50809436-50809531)
chr3 (8-103)||(50866331-50866426)
chr3 (19-190)||(27837946-27838114)
chr3 (414-507)||(38242138-38242230)
chr3 (16-105)||(40364342-40364431)
chr3 (110-190)||(27841629-27841709)
chr3 (129-252)||(49379837-49379960)
chr3 (8-103)||(50810840-50810935)
chr3 (8-103)||(50864929-50865024)
chr3 (8-149)||(38240921-38241060)
chr3 (19-193)||(53420342-53420516)
chr3 (136-193)||(14745117-14745174)
chr3 (19-207)||(26886298-26886486)
chr3 (19-103)||(36176512-36176597)
chr3 (16-104)||(41544685-41544773)
chr3 (129-252)||(13621055-13621178)
chr3 (132-193)||(10301072-10301133)
chr3 (19-104)||(53421766-53421851)
chr3 (31-159)||(53622700-53622829)
chr3 (142-190)||(10338886-10338934)
chr3 (28-207)||(10730920-10731097)
chr3 (129-193)||(48083362-48083426)
chr3 (16-204)||(42684899-42685086)
chr3 (19-206)||(3455529-3455715)
chr3 (16-57)||(18442275-18442316)
chr3 (16-57)||(19487349-19487390)
chr3 (19-190)||(35372080-35372248)
chr3 (16-103)||(37735329-37735416)
chr3 (161-251)||(54110143-54110232)
chr3 (19-81)||(55328333-55328395)
chr3 (8-57)||(3209983-3210032)
chr3 (12-56)||(12105309-12105353)
chr3 (148-252)||(24487177-24487280)
chr3 (162-210)||(44602944-44602991)
chr3 (47-193)||(36175317-36175461)
chr3 (144-195)||(46368958-46369009)
chr3 (48-105)||(12106629-12106686)
chr3 (10-103)||(23443463-23443556)
chr3 (19-76)||(24403265-24403322)
chr3 (156-193)||(28909524-28909561)
[»] chr8 (55 HSPs)
chr8 (8-271)||(32798369-32798633)
chr8 (8-213)||(44076257-44076464)
chr8 (8-213)||(32695170-32695376)
chr8 (9-207)||(45281091-45281288)
chr8 (3-204)||(22551017-22551216)
chr8 (8-180)||(42872120-42872290)
chr8 (19-105)||(26696558-26696644)
chr8 (16-252)||(42870836-42871074)
chr8 (16-213)||(6397806-6398001)
chr8 (19-188)||(13117554-13117723)
chr8 (19-207)||(42098589-42098777)
chr8 (8-207)||(4810484-4810679)
chr8 (129-252)||(31845653-31845775)
chr8 (8-205)||(30786691-30786888)
chr8 (13-105)||(30787604-30787696)
chr8 (8-103)||(28418821-28418916)
chr8 (129-207)||(9854782-9854860)
chr8 (129-207)||(24192566-24192644)
chr8 (19-104)||(8570144-8570229)
chr8 (8-100)||(32797153-32797245)
chr8 (19-122)||(32693856-32693959)
chr8 (129-207)||(20180577-20180655)
chr8 (19-204)||(42877645-42877827)
chr8 (129-193)||(10669362-10669426)
chr8 (19-190)||(13116356-13116525)
chr8 (19-123)||(17339535-17339639)
chr8 (132-252)||(17455185-17455305)
chr8 (8-103)||(28420180-28420275)
chr8 (19-193)||(8571533-8571707)
chr8 (16-104)||(41629731-41629819)
chr8 (16-87)||(13197963-13198034)
chr8 (10-104)||(211612-211706)
chr8 (10-104)||(240550-240644)
chr8 (10-104)||(725235-725329)
chr8 (10-104)||(793905-793999)
chr8 (129-207)||(38696443-38696521)
chr8 (139-193)||(40437513-40437567)
chr8 (129-195)||(42362666-42362731)
chr8 (19-103)||(17338067-17338151)
chr8 (29-121)||(26697820-26697912)
chr8 (19-190)||(42100027-42100196)
chr8 (134-206)||(42878735-42878806)
chr8 (19-57)||(45437534-45437572)
chr8 (144-193)||(43202246-43202295)
chr8 (414-462)||(32798203-32798251)
chr8 (16-76)||(45279703-45279763)
chr8 (33-104)||(29103527-29103598)
chr8 (24-103)||(29104371-29104450)
chr8 (156-207)||(37400942-37400993)
chr8 (10-57)||(45394984-45395031)
chr8 (129-202)||(14840807-14840880)
chr8 (8-57)||(38697058-38697107)
chr8 (16-81)||(41630152-41630217)
chr8 (29-121)||(6398485-6398577)
chr8 (8-40)||(12850464-12850496)
[»] chr6 (31 HSPs)
chr6 (8-271)||(7311562-7311825)
chr6 (29-207)||(29381632-29381810)
chr6 (19-190)||(5187541-5187712)
chr6 (28-190)||(17837651-17837813)
chr6 (19-207)||(23392240-23392428)
chr6 (19-213)||(18346646-18346840)
chr6 (13-100)||(34024073-34024160)
chr6 (8-87)||(34023901-34023980)
chr6 (16-167)||(6452453-6452604)
chr6 (16-105)||(6452307-6452396)
chr6 (8-104)||(232191-232285)
chr6 (414-507)||(7311339-7311431)
chr6 (19-190)||(23397275-23397444)
chr6 (8-102)||(15730036-15730131)
chr6 (129-207)||(11722921-11722999)
chr6 (19-104)||(2687256-2687341)
chr6 (10-103)||(27080941-27081034)
chr6 (19-123)||(6702857-6702960)
chr6 (16-207)||(12669746-12669936)
chr6 (19-122)||(17839126-17839229)
chr6 (19-159)||(32506977-32507116)
chr6 (19-103)||(29722689-29722773)
chr6 (8-103)||(27967055-27967150)
chr6 (19-103)||(6701406-6701490)
chr6 (129-193)||(11967351-11967415)
chr6 (17-81)||(27082172-27082236)
chr6 (19-122)||(5186594-5186697)
chr6 (19-122)||(29380217-29380320)
chr6 (16-57)||(233616-233657)
chr6 (19-104)||(2687929-2688014)
chr6 (16-57)||(7310299-7310340)
[»] chr1 (53 HSPs)
chr1 (9-202)||(45584915-45585109)
chr1 (19-188)||(15232778-15232947)
chr1 (19-207)||(15072693-15072880)
chr1 (16-267)||(35943289-35943540)
chr1 (8-121)||(52628861-52628974)
chr1 (10-159)||(27814309-27814457)
chr1 (129-251)||(52078003-52078125)
chr1 (8-157)||(50444651-50444799)
chr1 (16-169)||(14477732-14477884)
chr1 (29-190)||(16965045-16965207)
chr1 (9-81)||(34351984-34352056)
chr1 (8-104)||(46111493-46111589)
chr1 (16-167)||(14470879-14471029)
chr1 (16-104)||(15071365-15071453)
chr1 (16-204)||(16123310-16123497)
chr1 (16-104)||(24499660-24499748)
chr1 (29-207)||(49801653-49801831)
chr1 (129-207)||(9226118-9226196)
chr1 (19-105)||(44278353-44278439)
chr1 (129-207)||(48527669-48527747)
chr1 (129-194)||(13147332-13147397)
chr1 (94-252)||(48096891-48097046)
chr1 (19-169)||(23091377-23091527)
chr1 (129-252)||(51445725-51445848)
chr1 (129-195)||(9485219-9485285)
chr1 (19-204)||(16963860-16964043)
chr1 (19-193)||(41872602-41872775)
chr1 (146-207)||(46318521-46318582)
chr1 (8-57)||(52627530-52627579)
chr1 (129-252)||(14478401-14478525)
chr1 (161-251)||(5612943-5613034)
chr1 (129-190)||(3617417-3617478)
chr1 (19-104)||(15234046-15234131)
chr1 (19-159)||(49802847-49802985)
chr1 (94-204)||(15746673-15746781)
chr1 (129-205)||(44999367-44999443)
chr1 (9-103)||(50442640-50442734)
chr1 (19-202)||(46467172-46467353)
chr1 (141-185)||(9482602-9482646)
chr1 (8-206)||(41873875-41874072)
chr1 (48-207)||(46110337-46110494)
chr1 (132-207)||(13894752-13894826)
chr1 (149-207)||(12665945-12666003)
chr1 (19-121)||(44276148-44276250)
chr1 (129-267)||(6049267-6049406)
chr1 (132-252)||(10711926-10712046)
chr1 (132-252)||(10722234-10722354)
chr1 (161-248)||(26286578-26286666)
chr1 (129-207)||(18821642-18821720)
chr1 (19-57)||(42244657-42244695)
chr1 (8-102)||(51042350-51042443)
chr1 (129-202)||(26802075-26802148)
chr1 (110-169)||(34350228-34350288)
[»] chr5 (32 HSPs)
chr5 (10-193)||(39603870-39604054)
chr5 (8-207)||(22047747-22047947)
chr5 (9-202)||(30859078-30859272)
chr5 (12-207)||(27705218-27705413)
chr5 (8-213)||(325083-325286)
chr5 (19-190)||(30910767-30910939)
chr5 (129-207)||(1102753-1102831)
chr5 (8-204)||(8521270-8521463)
chr5 (16-121)||(22049124-22049229)
chr5 (19-114)||(39605464-39605559)
chr5 (8-204)||(1010272-1010465)
chr5 (16-207)||(15548263-15548456)
chr5 (19-189)||(30912084-30912252)
chr5 (133-207)||(11262532-11262606)
chr5 (19-159)||(30857826-30857964)
chr5 (17-105)||(15941297-15941385)
chr5 (19-169)||(33173901-33174050)
chr5 (16-204)||(22308705-22308892)
chr5 (134-206)||(1009325-1009396)
chr5 (145-193)||(13520716-13520764)
chr5 (8-104)||(24503199-24503295)
chr5 (8-104)||(24509041-24509137)
chr5 (8-104)||(34894164-34894260)
chr5 (8-52)||(41798004-41798048)
chr5 (129-202)||(4127161-4127234)
chr5 (132-193)||(10735901-10735962)
chr5 (8-57)||(32757840-32757889)
chr5 (129-202)||(9220365-9220441)
chr5 (16-57)||(11262279-11262320)
chr5 (8-97)||(34898963-34899052)
chr5 (134-207)||(36898884-36898957)
chr5 (8-36)||(15941409-15941437)
[»] scaffold0031 (2 HSPs)
scaffold0031 (8-203)||(125137-125334)
scaffold0031 (8-204)||(123984-124177)
[»] chr4 (70 HSPs)
chr4 (8-203)||(1794426-1794622)
chr4 (8-202)||(27850845-27851033)
chr4 (8-193)||(2312397-2312583)
chr4 (8-212)||(6348170-6348372)
chr4 (8-207)||(52239892-52240091)
chr4 (19-268)||(7707614-7707864)
chr4 (129-271)||(56085482-56085624)
chr4 (8-251)||(6349407-6349654)
chr4 (12-193)||(11968530-11968711)
chr4 (8-257)||(1829768-1830013)
chr4 (19-190)||(23201872-23202043)
chr4 (19-120)||(42871121-42871222)
chr4 (9-104)||(1188859-1188954)
chr4 (8-103)||(37882849-37882944)
chr4 (8-193)||(15449991-15450176)
chr4 (8-102)||(24426354-24426448)
chr4 (8-152)||(1588045-1588190)
chr4 (8-104)||(393643-393739)
chr4 (12-104)||(4129012-4129104)
chr4 (8-157)||(1587197-1587345)
chr4 (129-271)||(19750132-19750275)
chr4 (129-271)||(19789531-19789674)
chr4 (16-121)||(390240-390345)
chr4 (8-121)||(37884265-37884378)
chr4 (9-193)||(42810120-42810303)
chr4 (19-122)||(2310949-2311052)
chr4 (8-104)||(1831268-1831364)
chr4 (12-121)||(27847697-27847806)
chr4 (17-102)||(49342643-49342728)
chr4 (149-252)||(26629945-26630048)
chr4 (9-104)||(44503684-44503778)
chr4 (19-105)||(31965861-31965947)
chr4 (29-105)||(42872303-42872379)
chr4 (8-103)||(44501533-44501628)
chr4 (132-207)||(52138696-52138771)
chr4 (10-207)||(53432079-53432275)
chr4 (8-104)||(1190197-1190293)
chr4 (129-252)||(1519946-1520069)
chr4 (19-207)||(13165522-13165708)
chr4 (129-252)||(36845545-36845668)
chr4 (10-207)||(53435656-53435852)
chr4 (19-105)||(31968396-31968482)
chr4 (94-252)||(40723329-40723483)
chr4 (129-207)||(44498596-44498674)
chr4 (16-169)||(52963592-52963743)
chr4 (19-104)||(40792777-40792862)
chr4 (129-193)||(4871629-4871693)
chr4 (129-213)||(26496206-26496290)
chr4 (19-123)||(52241141-52241245)
chr4 (19-121)||(10168770-10168873)
chr4 (9-104)||(53205488-53205583)
chr4 (16-103)||(54485551-54485638)
chr4 (149-207)||(7053332-7053390)
chr4 (18-202)||(11438476-11438659)
chr4 (142-207)||(28590807-28590872)
chr4 (135-200)||(34326868-34326933)
chr4 (22-127)||(50548205-50548310)
chr4 (28-189)||(7708710-7708869)
chr4 (29-127)||(33232679-33232777)
chr4 (133-207)||(49896487-49896561)
chr4 (10-104)||(53204378-53204472)
chr4 (19-104)||(10167451-10167536)
chr4 (16-103)||(49344015-49344103)
chr4 (19-121)||(14524838-14524941)
chr4 (69-169)||(13166710-13166809)
chr4 (156-206)||(23103913-23103962)
chr4 (156-210)||(45535207-45535260)
chr4 (149-210)||(56157396-56157457)
chr4 (16-104)||(4871369-4871457)
chr4 (19-103)||(54865131-54865214)
[»] scaffold0077 (2 HSPs)
scaffold0077 (8-193)||(54100-54286)
scaffold0077 (19-122)||(52618-52721)
[»] scaffold0118 (1 HSPs)
scaffold0118 (8-207)||(43476-43676)
[»] scaffold0034 (2 HSPs)
scaffold0034 (19-202)||(108539-108722)
scaffold0034 (8-104)||(109750-109846)
[»] scaffold1152 (1 HSPs)
scaffold1152 (8-159)||(2427-2576)
[»] scaffold0011 (1 HSPs)
scaffold0011 (19-252)||(127459-127691)
[»] scaffold0201 (1 HSPs)
scaffold0201 (11-206)||(21145-21339)
[»] scaffold0078 (1 HSPs)
scaffold0078 (16-104)||(18835-18923)
[»] scaffold0019 (1 HSPs)
scaffold0019 (15-122)||(63117-63225)
[»] scaffold0013 (1 HSPs)
scaffold0013 (92-207)||(32670-32785)
[»] scaffold1251 (1 HSPs)
scaffold1251 (8-57)||(1137-1186)
[»] scaffold2071 (1 HSPs)
scaffold2071 (141-204)||(587-650)
[»] scaffold0219 (1 HSPs)
scaffold0219 (129-202)||(8099-8171)


Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 43460922 - 43460661
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcaca 109  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||||||||    
T  43460922 tccctcaaattatttgaagttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgccaaataaatcctcaca 43460823  T
Q  110 gttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttat 209  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43460822 gttaagtttaactcaaattatgtctatggtggaccaactttaagagtggtccaccatagatcctattaattattttaatttaaaccctttgatcttttat 43460723  T
Q  210 taaatggaggaccgttagatcacgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  43460722 taaatggaggaccgttaaatcacgtaggtatattttatcttacattgaaccatcaacactta 43460661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 32255004 - 32255204
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||| |||| |||||| ||||| ||||||||||| |||| ||||| |||||||||||| ||||| ||||||||||||||||  |    
T  32255004 ggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctccgtttgccaaataaatcccga 32255103  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    | ||||||||||| | ||||| |||| |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| || | |||||| |||    
T  32255104 cggttaagtttaaccccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatttcaaccgtttgattttt 32255203  T
Q  207 t 207  Q
    |    
T  32255204 t 32255204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 32256496 - 32256347
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |  |    
T  32256496 ggtccctcaaataatttcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccatttgccaaataaattccaa 32256397  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggt 159  Q
    | ||||| |||||||  ||  ||||||||||| ||||||| |||| ||||||    
T  32256396 ccgttaactttaacttcaa--atgtctatggtggaccaacattaaaagtggt 32256347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 11502512 - 11502340
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||||||||||| |||||||||  | |   || ||||||||  |||  |||  ||||||||||||||||  ||||||||||||    
T  11502512 taatttcatgttttcattttgatcccacatttaataaaaattgcgaattagtccctcaacttttgctctgtttgccaaataaatcccaacagttaagttt 11502413  T
Q  119 aac-tcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||| |||||| ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  11502412 aacctcaaatgatgtctatggtagaccaaccttaagagtggtccaccatagatcctagtaattattttaattt 11502340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 47454352 - 47454549
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||||||  |||  || | ||||||||||||||||  |    
T  47454352 ggtccctcaaataatttcaagctttcattttggtcccacaattaataaaacgtacattttggtccctcaagtttttcttcgtttgccaaataaatcccga 47454451  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |  |||| |||||||| ||  ||||||||||||||||||| ||||||||||| || | |||| | |||||||| | ||||||| || | |||||| ||||    
T  47454452 ctattaactttaactctaa--atgtctatggtagaccaaccttaagagtggtccatcgtagaccttattaattttattaattttaaccgtttgatttttt 47454549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 47059134 - 47059372
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||| |||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||||||| || |||||||||    
T  47059134 taattttaagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcctccgtttgccaaataaatcctgaccgttaagttt 47059233  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaa--ttattttaatttaaatcctttgatct-ttta-ttaaat 214  Q
    ||| |     | ||||||||| || |||| |||||||| |  ||||||||| | ||||||  || |||||||||||| | |||||||| |||| |||||     
T  47059234 aaccctccaaaagtctatggtggagcaaccttaagagtagcccaccatagaccttattaatttttttttaatttaaaccgtttgatctgtttatttaaaa 47059333  T
Q  215 ggaggaccgttagatcacgtaggtgtattttatcttaca 253  Q
    ||| |||| || ||| ||| | |||||||||||||||||    
T  47059334 ggatgaccattggattacgcatgtgtattttatcttaca 47059372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 13564329 - 13564158
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||  |||||||||||| |||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||  || |||||||||    
T  13564329 taatttcttgttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgtttgccaaataaatcccgac-gttaagttt 13564231  T
Q  119 aactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||| | |||| ||||||||||| || || | ||||||||||| ||||||||||||||||||||||||||||||    
T  13564230 aaccccaaataatgtctatggtggatcatccttaagagtggtccaccatagatcctattaattattttaattt 13564158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 6173551 - 6173455
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||    
T  6173551 ggtccctcaaataatttcaagttttcattttgtacccataattaataaaacgtacattttggtccctcactttttcctccgtttgccaaataaatcc 6173455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 193
Target Start/End: Complemental strand, 30334727 - 30334559
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat-cctcacagttaagtt 117  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    ||||||| |||||||||||||| ||  || ||||| |     
T  30334727 taatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctca----tccctccgtttgccaaataaattccaaaccgttaaatc 30334632  T
Q  118 taactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    |||||| ||  ||||||||||  ||||||||||||||   || |||||||||||||||||||| ||||||||||||    
T  30334631 taactctaa--atgtctatggaggaccaactttaagaacagtccaccatagatcctattaatt-ttttaatttaaa 30334559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 33096884 - 33096981
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    ||||||||||||||||||||||| |||||||   ||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||    
T  33096884 ggtccctcaaataatttcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcctccgtttgccaaataaatcct 33096981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 47456476 - 47456381
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| |||| | ||  |||||||||||||||    
T  47456476 ggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttcttctgtttgccaaataaatc 47456381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 22336005 - 22336176
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||  |||||||||||| |||||||||||||||||    | |||| ||||||||| ||| ||||  ||||||||||||||||  |  |||||||||    
T  22336005 taatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagtttgccaaataaatcccgaatgttaagttt 22336104  T
Q  119 aactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||| | |||| ||| ||||||| || |||| |||| |||||| ||||||||||||||||||||||||||||||    
T  22336105 aaccccaaatgatg-ctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 22336176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 95 - 207
Target Start/End: Original strand, 40811422 - 40811534
Alignment:
Q  95 aaataaatcctcacagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaat 194  Q
    ||||||||||| || ||||| |||||| ||||| ||||||||||| ||||||| ||||||||||| |||||||||| ||||||||  ||||||||||||     
T  40811422 aaataaatcctgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagattctattaatatttttaatttaaac 40811521  T
Q  195 cctttgatctttt 207  Q
    | |||||||||||    
T  40811522 cgtttgatctttt 40811534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 40509827 - 40509675
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc-ctcacagttaa 114  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| |||  || |||||||||| ||||| ||| |||||||||||  ||   |||||    
T  40509827 aaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgtttaccaaataaatcattcggtgttaa 40509728  T
Q  115 gtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccataga 169  Q
    ||||||| | ||  |||||||| || ||||||| ||||||||||| |||||||||    
T  40509727 gtttaaccccaa--atgtctatagtggaccaaccttaagagtggtccaccataga 40509675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 22115262 - 22115105
Alignment:
Q  11 ccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcaca 109  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| |||| |||  || |||||||||| ||||| ||  |||||||||||  ||       
T  22115262 ccctaaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgttnaccaaataaatcnttcggt 22115163  T
Q  110 gttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccataga 169  Q
    |||||||||||| | ||  |||||||| || ||||||| ||||||||||| |||||||||    
T  22115162 gttaagtttaaccccaa--atgtctatagtggaccaaccttaagagtggtccaccataga 22115105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 268
Target Start/End: Original strand, 22537595 - 22537832
Alignment:
Q  29 ttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaac-tcaaat 127  Q
    ||||||||||| ||||||||||| |||||   || ||||| |||||||| |||  |||  ||||||||||||||||  || ||||| |||||| ||||||    
T  22537595 ttttcattttggtcccacaattactaaaaatgacattttgatccctcacgtttgtctctgtttgccaaataaatcca-actgttaattttaacctcaaat 22537693  T
Q  128 tatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttag 227  Q
     |||| || |||  |||||| |||| |||| | ||||||||||||||||||||||||||||||||| | |||||| |||| | ||| |||  ||| || |    
T  22537694 gatgtttacggtgaaccaaccttaatagtgatccaccatagatcctattaattattttaatttaaaccgtttgattttttttaaaaggga--accattgg 22537791  T
Q  228 atcacgtaggtgtattttatcttacattgaaccatcaacac 268  Q
    || | | |||| |||||||||||||  ||||||| ||||||    
T  22537792 attatgcaggtctattttatcttacgatgaaccaccaacac 22537832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 414 - 507
Target Start/End: Complemental strand, 43460569 - 43460477
Alignment:
Q  414 tagatctgatcaactcttcaaagccaatcacataatcccttccacaaacnnnnnnnnnccttcatcttcatcccttctccaaattctctcatca 507  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  43460569 tagatctgatcaactcttcaaagccaatcacgtaatcccttccacaaac-taaaaaaaccttcatcttcatcccttctccaaattctctcatca 43460477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 45455473 - 45455360
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| || ||||||||| ||||||||||| ||||||||||||||||| |||| ||||| ||||||||||||  |||| ||||||||||||||| |      
T  45455473 ggtcccttaattaatttcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccgtttgccaaataaatcatgg 45455374  T
Q  108 cagttaagtttaac 121  Q
    | ||||||||||||    
T  45455373 ctgttaagtttaac 45455360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 30333308 - 30333395
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| ||||  |||| |||| ||||||||||    
T  30333308 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcatttttttctccgtttgtcaaataaatc 30333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 32602948 - 32603043
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||| ||||||||||||||||||| |||||| ||||| ||||||||||| |||| |||| |||||||||||||  |||| |||||||||||||||    
T  32602948 ggtccttcaaataatttcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttactccgtttgccaaataaatc 32603043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 43459478 - 43459650
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    |||||||||||||||||||||||| ||||||||||||||||| || | |||  ||||||||  ||| ||||| |||||||||||||||    | ||||||    
T  43459478 aaataatttcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgttttcctccgtttgccaaataaatctcggctgttaag 43459577  T
Q  116 tttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    |||||||| ||  ||||||||||| || |||| |||| | ||||||| | |||| | |||||||| | |||||||    
T  43459578 tttaactccaa--atgtctatggtggatcaaccttaaaaatggtacatcgtagaccttattaattttgttaattt 43459650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 4300140 - 4300054
Alignment:
Q  17 aataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||| |||  ||||||||||||| ||||  |||||||||||||||    
T  4300140 aataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctgtttgccaaataaatc 4300054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 40508401 - 40508490
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||| |||  ||||||||||||| ||||| || ||||||||||||||    
T  40508401 aaataatttcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgttagccaaataaatcct 40508490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 30310137 - 30310232
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||| |||| |||  || ||||| |||| ||||| ||||||||||||||||    
T  30310137 gtcccttaaataatttcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcctccgtttgccaaataaatcc 30310232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 41078771 - 41078930
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||| ||||||| | ||||||||||| |||||||||| |||||| ||| |||||| ||| | |  ||| |||||||||||| |||||||||  |    
T  41078771 ggtccctcaattaatttccatttttcattttggtcccacaattgataaaaagtatcttttgatcctttagattttcctccatttgccgaataaatcccga 41078870  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccata 167  Q
    | ||||| |||||| ||||| |||| |||||| ||||||  |||| | |||| |||||||    
T  41078871 cggttaactttaacccaaatgatgtatatggtggaccaatcttaaaaatggtccaccata 41078930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 41328354 - 41328477
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    ||||||||||| || ||||||||| | |||| ||||||||||||||||||||||| ||||||||| | |||||| |||| ||||| |||||  |||| ||    
T  41328354 atgtctatggtggaacaactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatatttttttaaaaggagggtcgttgga 41328453  T
Q  229 tcacgtaggtgtattttatcttac 252  Q
    | ||| |  |||||||||||||||    
T  41328454 ttacgcatatgtattttatcttac 41328477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 11501206 - 11501344
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| ||||||| |||||||||    | |||| ||||||||| ||| ||||||||||||||||||||||  || ||||| |||    
T  11501206 taatttcatgttttcattttggtcccacagttaataaaaatagcattttagtccctcaccttttcctccatttgccaaataaatcccgactgttaacttt 11501305  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggt 159  Q
    ||||  ||  ||||||||||| ||||||| |||| ||||||    
T  11501306 aacttcaa--atgtctatggtggaccaaccttaaaagtggt 11501344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 16756006 - 16756129
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    |||||||||||  | |||| |||| ||| ||  ||||||||||||||||||||||||||||| || | |||||| |||| ||||| |||||||| |||||    
T  16756006 atgtctatggtgaaacaaccttaaaagttgtctaccatagatcctattaattattttaattttaaccatttgat-tttttttaaaaggaggaccattaga 16756104  T
Q  229 tcacgtaggtgtattttatcttaca 253  Q
    | ||| | |||||||||||||||||    
T  16756105 ttacgcaagtgtattttatcttaca 16756129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 35295841 - 35295909
Alignment:
Q  136 tggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||    
T  35295841 tggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatct 35295909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 47060565 - 47060408
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||| |||||||||||||| ||| | ||||||||||| |||| ||||||||||||||  ||   ||| ||||||||||||||||  || |||||||||    
T  47060565 taattttaagttttcattttggtcctataattaataaaacgtacgttttggtccctcacccttttttccgtttgccaaataaatccggactgttaagttt 47060466  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaa 178  Q
    ||| | ||  |||| |||||| ||||||| |||||| | || ||||||||| | ||||||    
T  47060465 aacaccaa--atgtatatggtggaccaaccttaagaatagtccaccatagaccttattaa 47060408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 4298736 - 4298823
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||   |||  ||||||||||||| ||||  |||||||||||||||    
T  4298736 aaataattttaagtttttattttgatcccacaattaataaaatgtgggtttaagtccctcactttttcctctgtttgccaaataaatc 4298823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 44372864 - 44372942
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||||||| || ||| ||| ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||    
T  44372864 atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatctttt 44372942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 44381720 - 44381798
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||||||| || ||| ||| ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||    
T  44381720 atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatctttt 44381798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 45454064 - 45454150
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    |||||||| |||||||||||| || || |||||||||||  ||| |||| ||||||||||||| ||||| |||||||||||||||||    
T  45454064 taatttcacgttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccgtttgccaaataaatcct 45454150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 3414927 - 3414838
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    ||||||||||| |||||||||||| ||||| |||||||||||    | |||| |||| |||||||| |||||||||||||||||||||||    
T  3414927 aaataatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccttcactttttcctccatttgccaaataaatcct 3414838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 22337457 - 22337292
Alignment:
Q  22 tttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaac 121  Q
    ||||| ||||||||||||||||||||||||||||||  |  | ||  |||||| || ||| ||||| ||||||||||||||||| || ||||| ||||||    
T  22337457 tttcatgttttcattttgatcccacaattaataaaaa-tggcattcagtcccttacattttcctccgtttgccaaataaatcctgaccgttaaatttaac 22337359  T
Q  122 tcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    |  ||  ||||||||||| ||||||| ||||  || ||||||| |||| | |||||||| | |||||||    
T  22337358 ttcaa--atgtctatggtggaccaaccttaaatgtagtacaccgtagaccttattaattttgttaattt 22337292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 669369 - 669292
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||| ||||| ||| ||||||||| |||||||||||||||||||| | |||||||||| | |||||||||||    
T  669369 atgtctatggtggaccatctt-aagagtggtccaccatagatcctattaattttgttaatttaaaccgtttgatctttt 669292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 39981452 - 39981530
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||| |||||||||||| | |||| |||||||||||| |||||||||| ||||||||| | |||||| ||||    
T  39981452 atgtctatggtggaccaactttaaaaatggtccaccatagatccaattaattattctaatttaaaccgtttgatttttt 39981530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 46835690 - 46835875
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| |||||||||||| ||||| ||||  ||| |||||||||||||||||  |||  ||| |||| |||| ||||  |||| ||||||||| |||     
T  46835690 ggtcccttaaataatttcaaattttctttttagtcctacaattaataaaatgtatttttaagtctctcaatttttcctctgtttgtcaaataaat-ctcg 46835788  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
     |||||||||||| | ||||| |||| |||||| || ||   ||||   ||||  |||||| |||||||||||||||||||||||||    
T  46835789 aagttaagtttaaccccaaatgatgtttatggtggatcattcttaaagttggtctaccatatatcctattaattattttaatttaaa 46835875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 41079935 - 41079766
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||| ||||||| | |||| |||||| ||||||||| ||||||| |||| ||||||||||| |  ||| ||||| ||||| ||||||||||  |    
T  41079935 ggtccctcaattaatttccattttttattttggtcccacaat-aataaaacgtacgttttggtcccttatcttttcctccgtttgctaaataaatcccta 41079837  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaatt 180  Q
    | ||||| |||||||| ||  || |||||||| || |||| |||| |||||| || | |||| | ||||||||    
T  41079836 ccgttaactttaactccaa--atatctatggtggaacaacattaaaagtggtccatcgtagaccttattaatt 41079766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 46201266 - 46201330
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    |||||||||||  |||||| ||||||||||| ||||||||||| |||||||||||||||| ||||    
T  46201266 atgtctatggtgaaccaaccttaagagtggtccaccatagatcatattaattattttaatataaa 46201330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 43441481 - 43441604
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    |||||||||||  |||||| ||||||||||| |||||||  ||||||||||||||||||| ||||   |||||| |||| || || ||| |||  || ||    
T  43441481 atgtctatggtgtaccaaccttaagagtggtccaccataagtcctattaattattttaatgtaaactgtttgatattttttttaaaggatgactattgga 43441580  T
Q  229 tcacgtaggtgtattttatcttac 252  Q
    | ||| | ||||||||||||||||    
T  43441581 ttacgcaagtgtattttatcttac 43441604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 11344531 - 11344576
Alignment:
Q  17 aataatttcaagttttcattttgatcccacaattaataaaatgtac 62  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  11344531 aataatttcaagttttcattttggtcccacaattaataaaacgtac 11344576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 35664380 - 35664287
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||| || ||||||| | ||||||||||||||||| || ||||||||  ||||||||||||||| | ||||  |||| ||||||||| |||||    
T  35664380 tcccttaattaatttccatttttcattttgatcccataagtaataaaaaataccttttggtcccttagttttatctccgtttgccaaaaaaatc 35664287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 22538938 - 22538854
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||||| |||||| ||||| |||||||||||||||||   || |||| ||||||||  ||| ||||| |||||||||||||||    
T  22538938 taatttcatgttttctttttggtcccacaattaataaaaatgacgttttagtccctcatcttttcctccgtttgccaaataaatc 22538854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 33779177 - 33779106
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctcc 87  Q
    ||||||||||||||||||||||||  ||||||||||||||||   || |||| ||||||| ||||| |||||    
T  33779177 aaataatttcaagttttcattttggccccacaattaataaaactcacgttttagtccctcgctttttcctcc 33779106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 40811355 - 40811394
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccaca 47  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  40811355 ggtccctcaaataatttcaagttttcattttggtcccaca 40811394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 48312202 - 48312299
Alignment:
Q  156 tggtacaccatagatcctattaattattttaatttaaatcctttgatc--ttttattaaatggaggaccgttagatcacgtaggtgtattttatcttac 252  Q
    |||| |||||||||||||||||||| |||||||||||||  |||||||  |||| ||||| ||| |||| || ||| ||| |||| |||||||||||||    
T  48312202 tggtccaccatagatcctattaatt-ttttaatttaaatggtttgatctttttttttaaaaggatgaccattggattacgcaggtctattttatcttac 48312299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 15992270 - 15992328
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaa 187  Q
    ||||||||||| ||||||| ||||||||| |  |||| |||||||||||||||||||||    
T  15992270 atgtctatggtggaccaaccttaagagtgatttaccaaagatcctattaattattttaa 15992328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 24844332 - 24844389
Alignment:
Q  64 ttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaac 121  Q
    |||| ||||||||| ||| | ||| |||||||||||||||||||| ||||||||||||    
T  24844332 ttttagtccctcacattttcttccgtttgccaaataaatcctcactgttaagtttaac 24844389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 30311562 - 30311521
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  30311562 aaataatttcaaattttcattttggtcccacaattaataaaa 30311521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 2414892 - 2414944
Alignment:
Q  141 gaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    ||||||| |||| |||||| |||||||||||||||||||| | ||||||||||    
T  2414892 gaccaaccttaaaagtggtccaccatagatcctattaattttcttaatttaaa 2414944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 3413555 - 3413662
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat-cctcacagttaa 114  Q
    ||||||||||  |||||||||||| ||| |||||||||||||    | |||| ||||||||| |||  |||  |||||||||||||| ||| || |||||    
T  3413555 aaataatttcgtgttttcattttggtcctacaattaataaaaatggcgttttagtccctcaccttttactctgtttgccaaataaatccctaactgttaa 3413654  T
Q  115 gtttaact 122  Q
    ||||||||    
T  3413655 gtttaact 3413662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 24844440 - 24844402
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaa 57  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  24844440 taatttcatgttttcattttgatcctacaattaataaaa 24844402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 24281097 - 24281138
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    ||||||||||| ||||| |||||| |||||||||||||||||    
T  24281097 aaataatttcatgtttttattttggtcccacaattaataaaa 24281138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 40812703 - 40812646
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctca 76  Q
    |||||||| |||||||||||| | ||| ||||||||||| |||| ||||| |||||||    
T  40812703 taatttcatgttttcattttggttccataattaataaaacgtacgttttgctccctca 40812646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 271
Target Start/End: Original strand, 32469163 - 32469427
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaa--tgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||| ||||| || ||||||||||||||    
T  32469163 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtgtaccttttggtccttcactttttcctccgtt-gccaaataaatcct 32469261  T
Q  106 cacagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctt 205  Q
     | |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||    
T  32469262 tatagttaagtttaactcaaattatgtatatggtggaccaactttaagagtggtccactatagatcctattaattattttaatttaaaccctttgatatt 32469361  T
Q  206 ttattaaatggaggaccgttagatcacgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  32469362 ttattaaatggaggaccgttagatcacataggtgtattgtatcttacattgaaccatcaacactta 32469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 8 - 271
Target Start/End: Complemental strand, 11317469 - 11317205
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||  ||  ||||||||||||| |||| ||||| |||| ||||||||||||||    
T  11317469 ggtccctcaaataatttcaaattttcattttggtcccacaattaataaaacatatattttggtccctcaatttttcctccgtttggcaaataaatcctca 11317370  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatc-ttt 206  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| |||| || |||    
T  11317369 cagttaagtttaactcaaatgatgtctatggtagaccaaccttaagagtggtctaccatagatcctattaattattttaatttaaatcgtttggtcattt 11317270  T
Q  207 tattaaatggaggaccgttagatcacgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
    | | ||| ||| ||||||| |||| ||||||||||||||||||||  ||||||||||||||||||    
T  11317269 tttaaaaaggatgaccgttggatcccgtaggtgtattttatcttaggttgaaccatcaacactta 11317205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 8 - 271
Target Start/End: Complemental strand, 42641961 - 42641698
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||| |||| |||||| ||||| ||||||||||| | ||||||||||||| |||||||   ||| |||||||||||||||||||    
T  42641961 ggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgcaccttttggtcccccactttttt-tccgtttgccaaataaatcctca 42641863  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    || ||||||| ||| ||||| ||||||||||| | ||||| |||||||||||  ||||||||||||||||||||||||||||||||   |||||||||||    
T  42641862 caattaagttcaacccaaatgatgtctatggtgggccaaccttaagagtggtctaccatagatcctattaattattttaatttaaactgtttgatctttt 42641763  T
Q  208 atta-aatggaggaccgttagatcacgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
     ||  ||  ||| | |||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  42641762 tttttaaaagagaatcgttggatcacgtaggtgtattttatcttacgttgaaccttcaacactta 42641698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 43033099 - 43033280
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcaca 109  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||       
T  43033099 tcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcctcgat 43033198  T
Q  110 gttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    ||||||||||| |||||   ||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||    
T  43033199 gttaagtttaacctcaa---atgtctatggtagaccaaccttaagagtggtccaccataaaccctattaattattttaatttaaa 43033280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 43034572 - 43034400
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| ||||| |||| |||||||||| ||     
T  43034572 ggtccctcaaataatttcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgtcaaataaatcttcg 43034473  T
Q  108 cagttaagtttaa---ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaatt 180  Q
    | |||||||||||   |||||   ||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  43034472 ctgttaagtttaacctctcaa---atgtctatggtggatcaactttaagagtggtccaccatagatcctattaatt 43034400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 6030570 - 6030372
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcac 108  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||||| ||| |||  ||| |||| ||||||||||||||||   ||    
T  6030570 gtccctcaaataatttgaagttttcattttgatcccacaattaattaaaagtacgttttgatccttcatattttcctctatttgccaaataaatctcaac 6030471  T
Q  109 agttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||||| |||||| ||||| ||||||| ||| ||||||| ||||||||| |  ||||||||||||||||||  |||||||||||| | |||||||||||    
T  6030470 agttaactttaacccaaatgatgtctacggtggaccaaccttaagagtgatctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 6030372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 9 - 210
Target Start/End: Original strand, 17459269 - 17459471
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcac 108  Q
    |||||| |||||||||||||||||||||||| || |||||||||||||| |||| |||  ||||||||||||| ||||| |||||||||||||| || ||    
T  17459269 gtcccttaaataatttcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtttgccaaataaattctgac 17459368  T
Q  109 agttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
      |||||||||| | ||||| ||||||||||| ||| ||  |||| |||| |  | |||||||||||||||||||| ||||||||| | |||||| ||||    
T  17459369 ttttaagtttaaccccaaatgatgtctatggtggacgaatcttaaaagtgatctaacatagatcctattaattattataatttaaaccgtttgatttttt 17459468  T
Q  208 att 210  Q
    |||    
T  17459469 att 17459471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 29219411 - 29219583
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| |||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||  || |||||||||    
T  29219411 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccaactgttaagttt 29219510  T
Q  119 aactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||| | |||| ||||||||||| ||||||  |||| |||||| ||||||||||||||||||||||||||||||    
T  29219511 aaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaattt 29219583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 29332710 - 29332882
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| |||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||  || |||||||||    
T  29332710 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccaactgttaagttt 29332809  T
Q  119 aactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||| | |||| ||||||||||| ||||||  |||| |||||| ||||||||||||||||||||||||||||||    
T  29332810 aaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaattt 29332882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 18617096 - 18616862
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| |||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||  ||  ||||||||    
T  18617096 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccaactattaagttt 18616997  T
Q  119 aactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatgga 217  Q
    ||| | |||| ||||||||||| |||||   |||| |||||| |||||||||||||||||||||||||||||| || | |||||| |||| | |||  ||    
T  18616996 aaccccaaatgatgtctatggtggaccagtcttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgattttttttaaaaaaga 18616897  T
Q  218 ggaccgttagatcacgtaggtgtattttatcttac 252  Q
    | ||| || ||| |  ||||| |||||||||||||    
T  18616896 gaaccattggattagataggtctattttatcttac 18616862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 1085476 - 1085307
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| | ||||| ||||||||||   | ||||||||||||| |||  ||||| |||||||||||||||   || |||||||||    
T  1085476 taatttcatgttttcattttggtaccacatttaataaaattggcgttttggtccctcatttt--cctccgtttgccaaataaatcacaaccgttaagttt 1085379  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||   |||| |||| |||||| || || ||||||||||||||||||||||||||||||||||||||||||||    
T  1085378 aataaaaatgatgtttatggtggatcatctttaagagtggtacaccatagatcctattaattattttaattt 1085307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 7437857 - 7437733
Alignment:
Q  13 ctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagtt 112  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||||| |||| ||||| ||| | ||||||||||| ||| ||    
T  7437857 ctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgtttacaaaataaatcctaacaatt 7437758  T
Q  113 aagtttaactcaaattatgtctatg 137  Q
    ||||||||| ||||| || ||||||    
T  7437757 aagtttaacccaaataatatctatg 7437733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 28562910 - 28562798
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||||||||  |||||||||||||||||||||| ||||| |||| |||||||||||  |    
T  28562910 ggtccctcaaataatttcaaattttcattttggtcccataattaataaaacataccttttggtccctcactttttcctccgtttgtcaaataaatccaga 28562811  T
Q  108 cagttaagtttaa 120  Q
    | |||||||||||    
T  28562810 ctgttaagtttaa 28562798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 7436482 - 7436594
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||| ||||| |||| | ||| |||| |||||||||||| |    
T  7436482 ggtccctcaaataatttcaagtttttattttggtcctacaattaataaaatataccttttggt-cctcaatttttcttccgtttgtcaaataaatcctaa 7436580  T
Q  108 cagttaagtttaac 121  Q
    ||||||||| ||||    
T  7436581 cagttaagtctaac 7436594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 17460774 - 17460636
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||| ||||| ||| ||||||||||||  || ||||| |||    
T  17460774 taatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttcccaaataaatcccgaccgttaacttt 17460675  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggt 159  Q
    ||||  ||  ||||||||||| ||||||  |||| ||||||    
T  17460674 aactttaa--atgtctatggtggaccaatcttaaaagtggt 17460636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 4921039 - 4920917
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    |||||||||||||||||||||||| | |||| ||||||| ||||||||||||||| ||||||||| | |||||| |||| ||||| |||||| | || ||    
T  4921039 atgtctatggtagaccaactttaaaaatggtccaccataaatcctattaattattctaatttaaaccgtttgat-tttttttaaaaggaggatcattgga 4920941  T
Q  229 tcacgtaggtgtattttatcttac 252  Q
    | ||| ||||||||||||||||||    
T  4920940 ttacgcaggtgtattttatcttac 4920917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 11315956 - 11316118
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| |||  ||||||||  ||| ||||| ||||||||||||||||   | ||||||    
T  11315956 aaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttgccaaataaatcccggctgttaag 11316055  T
Q  116 tttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaatt 180  Q
    ||||| || ||  ||||||||||| || |||| |||| | |||| |||| |||| | ||||||||    
T  11316056 tttaattccaa--atgtctatggtggatcaaccttaaaaatggtccaccgtagaccttattaatt 11316118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 414 - 507
Target Start/End: Original strand, 32469570 - 32469662
Alignment:
Q  414 tagatctgatcaactcttcaaagccaatcacataatcccttccacaaacnnnnnnnnnccttcatcttcatcccttctccaaattctctcatca 507  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||         |||||||||||||||||| |||||||||||||||||    
T  32469570 tagatctgatcaactcttcaaagccaatcacgtaatcccttccacaaac-taaaaaaaccttcatcttcatcccttgtccaaattctctcatca 32469662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 28561383 - 28561477
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat 102  Q
    ||||||| ||||||||| |||||||||||||| || |||||||||||||| ||| ||||||||||||||| ||| ||| | |||| |||||||||    
T  28561383 ggtcccttaaataattttaagttttcattttggtctcacaattaataaaacgtatcttttggtccctcaccttttcctacgtttgtcaaataaat 28561477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 11547682 - 11547870
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    |||||||||||||||||||||||| || || |||||||||||   |  ||||   |||||| |||| ||| | |||| |||||||||||| || ||||||    
T  11547682 aaataatttcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgtttgtcaaataaatcctgactgttaag 11547781  T
Q  116 tttaactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    |||||| | |||| ||||||||  | ||||||| ||| ||||||| ||||||||||| |||||| | || ||||||||| | ||||||||    
T  11547782 tttaaccccaaatgatgtctatcatggaccaaccttaggagtggtccaccatagatcgtattaaat-ttataatttaaaccgtttgatct 11547870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 35903534 - 35903721
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca-cagttaagtt 117  Q
    ||||||||||||||||||||| ||||| || ||||||||   |  ||||||||||||| || |  |||| |  | ||||||||||||   | ||||||||    
T  35903534 taatttcaagttttcattttggtcccataactaataaaagtcatgttttggtccctcaattatatctccgtcagtcaaataaatccttggctgttaagtt 35903633  T
Q  118 taactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttta 208  Q
    |||| | ||  ||||||||| ||||  | |||| |||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||    
T  35903634 taaccccaa--atgtctatgatagatta-cttttagagtggtccaccatagatcctattaaatattttaatttaaaccgtttgatctttta 35903721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 32470668 - 32470547
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||| |||  || |||||  ||| ||||| |||| |||||||||||   | ||||||    
T  32470668 aaataatttcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcctccgtttgtcaaataaatcccggctgttaag 32470569  T
Q  116 tttaactcaaattatgtctatggt 139  Q
    |||||||| ||  |||||||||||    
T  32470568 tttaactccaa--atgtctatggt 32470547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 28611233 - 28611112
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    ||||||||||| |||| ||||||| | |||| ||| ||||||||||||||||| ||||||||||| | |||||| |||| ||||| |||||  | ||  |    
T  28611233 atgtctatggtggaccgactttaaaaatggtccactatagatcctattaatta-tttaatttaaaccgtttgatttttttttaaaaggagggtcattgaa 28611135  T
Q  229 tcacgtaggtgtattttatctta 251  Q
    | ||| |||||||||||||||||    
T  28611134 ttacgcaggtgtattttatctta 28611112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 30748634 - 30748692
Alignment:
Q  149 ttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||    
T  30748634 ttaagagtggcacaccatagatcatattaattattttaatttaaattgtttgatctttt 30748692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 36011734 - 36011648
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||||| |||||| |||||| |||||| |||||||||||||||| |||| |||||||| ||||   ||| |||||||||||||||    
T  36011734 aaataattttaagttt-cattttaatcccataattaataaaatgtacgttttagtccctcattttttaatccgtttgccaaataaatc 36011648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 16290742 - 16290697
Alignment:
Q  162 accatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||    
T  16290742 accatagatcctattaattattttaatttaaatcgtttaatctttt 16290697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 2277570 - 2277502
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctca 76  Q
    |||||||||||||||||| ||||||||||||| ||||| || ||||||||  ||  |||||||||||||    
T  2277570 ggtccctcaaataatttccagttttcattttggtcccataagtaataaaacttatgttttggtccctca 2277502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 36010593 - 36010681
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaa 97  Q
    |||||| ||||||||||| |||||||||||| ||  || |||||||||| |||  |||| ||||||||||||| ||| | |||||||||    
T  36010593 gtcccttaaataatttcatgttttcattttggtcttacgattaataaaacgtatattttagtccctcactttttccttcgtttgccaaa 36010681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 12359779 - 12359684
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||| ||||||||||| |||||| ||||  ||||||||||||||||||   | ||||||||||||| |||| |||   || |||||||||||||    
T  12359779 gtcccttaaataatttcatgttttcgttttagtcccacaattaataaaattggcgttttggtccctcattttttcctttgttcgccaaataaatcc 12359684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 30749305 - 30749202
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt---attaaatggaggaccgtt 225  Q
    |||||||||||| |||||| ||||||||||| ||| | ||  ||||||||||||||||||||||| | | |||||||||   ||||||  ||||||||||    
T  30749305 atgtctatggta-accaaccttaagagtggttcactacagggcctattaattattttaatttaaaccgtatgatcttttttgattaaa-agaggaccgtt 30749208  T
Q  226 agatca 231  Q
    ||||||    
T  30749207 agatca 30749202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 34513534 - 34513459
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    |||| |||||| ||||||| ||||||||| | ||||||||| | |||||||| |||||||||||| | ||||||||    
T  34513534 atgtatatggttgaccaaccttaagagtgatccaccatagaccttattaatttttttaatttaaaccgtttgatct 34513459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 44192536 - 44192453
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat 102  Q
    |||||||| |||||||||||||||||| |||||||||||    | |||| ||||||||| ||| ||||| |||| |||||||||    
T  44192536 taatttcatgttttcattttgatcccaaaattaataaaaatggcattttagtccctcacattttcctccgtttgtcaaataaat 44192453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 8320895 - 8320965
Alignment:
Q  132 tctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    |||||||| ||||| | ||||||| ||| ||||||||||  ||||||||||||||||||||| | ||||||    
T  8320895 tctatggtggaccatccttaagagcggtccaccatagattatattaattattttaatttaaaccgtttgat 8320965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 6030631 - 6030716
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||| |||||||||||  ||||||||||||||||||   | |||| || ||| | |||| ||||| ||||||||||||||||    
T  6030631 taatttcatgttttcattttagtcccacaattaataaaattggcgttttagttccttattttttcctccgtttgccaaataaatcc 6030716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 34468984 - 34469068
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||||| |||||||||||| || ||||||||||||||   || |||| ||||||||| ||| | ||  |||||||||||||||    
T  34468984 taatttcatgttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgtttgccaaataaatc 34469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 34147151 - 34147200
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    |||||||||||||||||  ||||||||||||| ||||| || ||||||||    
T  34147151 ggtccctcaaataattttcagttttcattttggtcccataagtaataaaa 34147200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 34464069 - 34464167
Alignment:
Q  94 caaataaatc-ctcacagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaa 192  Q
    |||||||||| || || |||||||||||| | ||  |||||||| || ||||||| ||||||||||| ||||||||| | |||||  | |||||||||||    
T  34464069 caaataaatctctgactgttaagtttaaccccaa--atgtctatcgttgaccaaccttaagagtggtccaccatagaccttattagattttttaatttaa 34464166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 1e-88; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 7 - 271
Target Start/End: Complemental strand, 38242618 - 38242353
Alignment:
Q  7 aggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   ||  ||||||||||||||||||    
T  38242618 aggtccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtaccttttggtccctcacttttttatctgtttgccaaataaatcctc 38242519  T
Q  107 acagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||| || |||||||||||||||||||||| | |||||| |||    
T  38242518 acagttaagtttaactcaaatgatgtctatggtggaccaaccttaagagtggtccaccataaattctattaattattttaatttaaaccgtttgattttt 38242419  T
Q  207 ta-ttaaatggaggaccgttagatcacgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
    |  || || | | ||||||| |||||||||| ||||||||||||||| ||||||||||||||||||    
T  38242418 ttgtttaaagcatgaccgttggatcacgtagatgtattttatcttacgttgaaccatcaacactta 38242353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 34819384 - 34819201
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcac 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||  |||| ||||||||  |||  |||||||||| | ||||  |    
T  34819384 gtccctcaaataatttcaagttttcattttgatcctacaattaataaaacgtacgtttaagtccttcactttt-tctctgtttgccaaat-agtccttgc 34819287  T
Q  109 agttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
     ||||||||||| | ||||| |||||||| || || |||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  34819286 tgttaagtttaaccccaaatgatgtctatagtggatcaaccttaagagtggtccaccatagatcctattacttattttaatttaaa 34819201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 18197163 - 18197277
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcac 108  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||||  ||    
T  18197163 gtccctcaaataatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgccaaataaatccagac 18197262  T
Q  109 agttaagtttaactc 123  Q
     ||||| ||||||||    
T  18197263 cgttaactttaactc 18197277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 3208510 - 3208693
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||| | ||||||||||| ||||| ||||||||||| |||| ||||| ||||| | |||| ||||| |||| |||||||||||| || |||||||||    
T  3208510 taatttccatttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccgtttgtcaaataaatccttaccgttaagttt 3208609  T
Q  119 aa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    || | ||||| || | |||||| ||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||| | ||||||    
T  3208610 aaccccaaatgatat-tatggtggaccaaccttaagagtggtccaccataaatcctattaattattataatttaaaccgtttgat 3208693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 10732210 - 10732048
Alignment:
Q  28 gttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaactcaaat 127  Q
    |||||||||||| ||||| |||||||||||    | |||| ||||||||| ||| ||||| ||| |||||||||| |  || |||||||||||| |||||    
T  10732210 gttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctccgtttaccaaataaattccgacggttaagtttaacccaaat 10732111  T
Q  128 tatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
     ||||||||||| ||||||| || |||| ||| ||||||||||||||||||||||||||||||    
T  10732110 gatgtctatggtggaccaacctttagagcggtccaccatagatcctattaattattttaattt 10732048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 53194962 - 53194841
Alignment:
Q  17 aataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcacagttaag 115  Q
    ||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||||| |||| ||||||||||||||||| |  | ||||||    
T  53194962 aataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctatttgccaaataaatccatgtctgttaag 53194863  T
Q  116 tttaactcaaattatgtctatggt 139  Q
    |||||||||||  |||||||||||    
T  53194862 tttaactcaaa--atgtctatggt 53194841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 41264743 - 41264572
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| || |||| |||||||||    | ||||| |||||||| |||  |||| |||||||||||||||   || |||||||||    
T  41264743 taatttcatgttttcattttggtctcacatttaataaaaatggcgttttgatccctcacctttttctccgtttgccaaataaatctcaaccgttaagttt 41264644  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||   |||| |||| |||||| || || ||||||||||||||||||||||||||||||||||||||||||||    
T  41264643 aataaaaatgatgtttatggtggatcatctttaagagtggtacaccatagatcctattaattattttaattt 41264572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 53624462 - 53624261
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| |||||||||  |||  ||||||||||||||||  |    
T  53624462 ggtccctcaaataatttcaagttttcattttgatctcacaattaataaaacgtacattttggtcactcacttttttctcggtttgccaaataaatccaga 53624363  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaacttta-agagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    | |||| ||||||| | ||  |||| |||||| ||||||| ||| ||| | || ||||||||| | |||||||| ||| ||||| || | ||||||||||    
T  53624362 cggttaggtttaaccccaa--atgtatatggtggaccaacattataga-tagtccaccatagaccttattaatt-tttcaattttaaccttttgatcttt 53624267  T
Q  207 tattaa 212  Q
    | ||||    
T  53624266 ttttaa 53624261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 53614363 - 53614192
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||  ||||| |||||| |||||||||||||||||    | |||| ||||||||| ||| |||| |||||||||||||||||   | |||||||||    
T  53614363 taatttcttgtttttattttggtcccacaattaataaaactggcgttttagtccctcacattttcctctatttgccaaataaatccaggc-gttaagttt 53614265  T
Q  119 aactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||| | |||| ||||||||||| || || | ||||||||||| |||||||||||||| |||||||||||||||    
T  53614264 aaccccaaataatgtctatggtggatcatccttaagagtggtccaccatagatcctagtaattattttaattt 53614192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 12108083 - 12107857
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcac 108  Q
    |||||| |||||||||||||||||||||||| |||||||| ||||||||  ||  |||||||||||||||||| ||||| ||||||||||||    ||||    
T  12108083 gtcccttaaataatttcaagttttcattttggtcccacaactaataaaacatatattttggtccctcactttttcctccgtttgccaaataataaatcac 12107984  T
Q  109 ---agttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatc- 203  Q
        ||||| ||||| | ||||| || | |||||| ||||||| |||| |||||| ||||||||| ||||||  || ||||||| |||| | |||||||     
T  12107983 gggtgttaaatttaaccccaaatgatatttatggtggaccaaccttaaaagtggtccaccatagaccctatt-ttttttttaatataaaccgtttgatct 12107885  T
Q  204 -ttttattaaatggaggaccgttagatca 231  Q
     |||||||||| |||||||| ||||||||    
T  12107884 tttttattaaa-ggaggaccattagatca 12107857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 40244202 - 40244395
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| |||||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||  ||| ||||| |||||||||| |||  | |    
T  40244202 ggtcccttaaataatttcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcctccgtttgccaaat-aattttga 40244300  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    ||||||| |||||||  ||   |||||||||| ||||||  |||| |||||| || | |||| | |||||||| | ||||||| ||  |||||||||    
T  40244301 cagttaactttaacttcaa--gtgtctatggtggaccaaacttaaaagtggtccatcgtagaccttattaattttgttaattttaactctttgatct 40244395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 53187582 - 53187686
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    |||||||||||||||||||||||||||  |||||||||||||||||   ||||||||||||||||| | ||| ||||||||||||||||  || ||||||    
T  53187582 aaataatttcaagttttcattttgatcttacaattaataaaatgta-tgtttggtccctcactttttcttccgtttgccaaataaatccctaccgttaag 53187680  T
Q  116 tttaac 121  Q
    ||||||    
T  53187681 tttaac 53187686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 35370939 - 35371104
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| ||||||||||||||||||||||||||||||      |||| |||| |||| ||| ||||  |||| |||||| |      | |||||||||    
T  35370939 taatttcatgttttcattttgatcccacaattaataaaaatggtgttttagtccttcaccttttcctctgtttgtcaaataga------cggttaagttt 35371032  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    | | ||||| |||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  35371033 agcccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattt 35371104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 34818112 - 34818215
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||||||||||||||| ||||||||||||||||| |||   ||||||||||||  ||| ||||||||||||||||||||||  | |||||| |||    
T  34818112 taatttcaagttttcattttggtcccacaattaataaaacgtatgatttggtccctcagattttcctccatttgccaaataaatcccaatagttaacttt 34818211  T
Q  119 aact 122  Q
    ||||    
T  34818212 aact 34818215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 132 - 271
Target Start/End: Complemental strand, 53194590 - 53194451
Alignment:
Q  132 tctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttagatca 231  Q
    |||||||||||| ||  |||| |||| | |||||||||| ||||||||||||||| |||||| | ||||||||||| |||||  || || ||||||||||    
T  53194590 tctatggtagacaaatcttaaaagtgatccaccatagattctattaattattttattttaaaccgtttgatctttttttaaaatgaagatcgttagatca 53194491  T
Q  232 cgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
    || | ||||||| ||||||||  |||||||| ||||||||    
T  53194490 cgcatgtgtattctatcttacgatgaaccatgaacactta 53194451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 37736181 - 37736089
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaa 101  Q
    |||||| ||||||||||| |||||||||||| || |||||||||||||| |||| |||| |||||||||||||  |||| |||||||||||||    
T  37736181 gtcccttaaataatttcatgttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctccgtttgccaaataaa 37736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 18458750 - 18458663
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||||||||||||| |||||| |||||||||||||||||  | | |||| ||||||||||||| ||||| |||||||||||||||    
T  18458750 aaataatttcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgccaaataaatc 18458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 50809436 - 50809531
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||   || |||| ||||||||||||| ||||| |||||||||||||||    
T  50809436 ggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatc 50809531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 50866426 - 50866331
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||   || |||| ||||||||||||| ||||| |||||||||||||||    
T  50866426 ggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatc 50866331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 27837946 - 27838114
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaa-atgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtt 117  Q
    |||||||| |||||||||||| |||||||||||||||| |||  | |||| ||||||||| ||| ||||| ||||||||||||||||| || ||||| ||    
T  27837946 taatttcatgttttcattttggtcccacaattaataaatatgg-cgttttagtccctcaccttttcctccgtttgccaaataaatcctgactgttaactt 27838044  T
Q  118 taactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
     |  ||||   |||||||||||||||||| ||||| |||||| || | |||| | |||||||| | |||||||    
T  27838045 aacttcaa---atgtctatggtagaccaattttaaaagtggtccatcgtagaccttattaattttgttaattt 27838114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 414 - 507
Target Start/End: Complemental strand, 38242230 - 38242138
Alignment:
Q  414 tagatctgatcaactcttcaaagccaatcacataatcccttccacaaacnnnnnnnnnccttcatcttcatcccttctccaaattctctcatca 507  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||         ||||||||||||||||||| ||||||||||||||||    
T  38242230 tagatctcatcaactcttcaaagccaatcacgtaatcccttccacaaac-taaaaaaaccttcatcttcatcccttccccaaattctctcatca 38242138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 40364342 - 40364431
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||| |||  |||||||| ||||  |||| |||||||||||||||||    
T  40364342 aaataatttcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgtttgccaaataaatcct 40364431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 27841709 - 27841629
Alignment:
Q  110 gttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    |||||||||||   ||||||||| |||||| ||||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  27841709 gttaagtttaatctaaattatgtttatggtggaccaaccttaagagtggtccaccatagatcctaataattattttaattt 27841629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 49379837 - 49379960
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    ||||||||||| |||| ||||||| | |||| ||||||||||||||||||||||| |||||||||   |||||| |||| ||||| |||||  | || ||    
T  49379837 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaactgtttgatatttttttaaaaggagggtcattgga 49379936  T
Q  229 tcacgtaggtgtattttatcttac 252  Q
    | ||| || |||||||||||||||    
T  49379937 ttacgcagatgtattttatcttac 49379960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 50810935 - 50810840
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||   || |||| |||||||| |||| ||||| |||||||||||||||    
T  50810935 ggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgccaaataaatc 50810840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 50864929 - 50865024
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||   || |||| |||||||| |||| ||||| |||||||||||||||    
T  50864929 ggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgccaaataaatc 50865024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 38240921 - 38241060
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||  ||||||||||| |||| |||||| ||||||||||||||||| |||| |||  |||| |||  ||| ||||| ||||||||||||||||       
T  38240921 ggtcccttgaataatttcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgtttgccaaataaatcccgg 38241020  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactt 149  Q
    | |||||||||||||| ||  |||||||||||  ||||||||    
T  38241021 ctgttaagtttaactccaa--atgtctatggtgaaccaactt 38241060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 53420342 - 53420516
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca--cagttaagt 116  Q
    ||||||||  ||||||||||| ||| ||||||||||||| |||| ||||||||||||||||||  |||| |||  |||||||||||  |  |  ||||||    
T  53420342 taatttcatattttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttctccgtttatcaaataaatccctagtctattaagt 53420441  T
Q  117 ttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    |||||   ||  ||||||||||| |||||||||||| |||| | ||||||||| | ||||||   ||||||||||||    
T  53420442 ttaaccacaa--atgtctatggtggaccaactttaaaagtgatccaccatagaccttattaaactttttaatttaaa 53420516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 14745174 - 14745117
Alignment:
Q  136 tggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  14745174 tggtggaccaaccttaagagtggttcaccatagatcctattaattattttaatttaaa 14745117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 26886298 - 26886486
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||  ||||||||||| ||  |||||||||||||      ||||| |||||||| |||  |||  ||||||||||||||||  || ||||| ||     
T  26886298 taatttcatattttcattttggtctaacaattaataaaaatggtgttttgatccctcacgtttgtctctgtttgccaaataaatccg-actgttaatttc 26886396  T
Q  119 aac-tcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||| |||||| |||| || |||  |||||| ||||||||||| ||||||| ||||||||||||||||||||||||| | |||||| ||||    
T  26886397 aacctcaaatgatgtttacggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaatttaaaccgtttgatttttt 26886486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 36176597 - 36176512
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctca-cttttccctccatttgccaaataaatc 103  Q
    |||||||| |||||||||||| |||||||||||||||||||||  |||||||||||||  |||| ||||  |||||||||||||||    
T  36176597 taatttcatgttttcattttggtcccacaattaataaaatgtatgttttggtccctcatttttttcctctgtttgccaaataaatc 36176512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 41544685 - 41544773
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||||||||||||||||||| ||| | |||||||| || |||| |||  ||||||||||||| ||||  ||||||||||||||||    
T  41544685 aaataatttcaagttttcattttggtcctataattaatataacgtacgtttaagtccctcactttttcctctgtttgccaaataaatcc 41544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 13621055 - 13621178
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    ||||||||||| |||| |||| || | |||| ||||||||||||||||||||||| ||||||||| | ||| || |||| ||||| |||||  | || ||    
T  13621055 atgtctatggtggaccgacttaaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttaatttttttttaaaaggagggtcattgga 13621154  T
Q  229 tcacgtaggtgtattttatcttac 252  Q
    | ||| || |||||||||||||||    
T  13621155 ttacgcagatgtattttatcttac 13621178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 10301072 - 10301133
Alignment:
Q  132 tctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    ||||||||  |||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  10301072 tctatggtgaaccaaccttaagagtgatccaccatagatcctattaattattttaatttaaa 10301133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 53421851 - 53421766
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||| | |||||||||||  ||| ||||||||||||| |||| ||||||||||||||||||  |||  ||||||||||||||||    
T  53421851 taattttacgttttcattttagtcctacaattaataaaacgtacgttttggtccctcacttttttctctgtttgccaaataaatcc 53421766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 53622700 - 53622829
Alignment:
Q  31 ttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaa-ctcaaatta 129  Q
    ||||||||| || ||||||||||||||  ||  ||||| ||||| |  ||| ||||| |||||||| |||||||  || ||||||||||| | ||||| |    
T  53622700 ttcattttggtcgcacaattaataaaaaatatattttgatcccttagattttcctccgtttgccaactaaatcccaacggttaagtttaaccccaaatga 53622799  T
Q  130 tgtctatggtagaccaactttaagagtggt 159  Q
    |||||||||| ||||||| |||||||||||    
T  53622800 tgtctatggtggaccaaccttaagagtggt 53622829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 10338886 - 10338934
Alignment:
Q  142 accaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  10338886 accaaccttaagagtggtccaccatagatcctattaattattttaattt 10338934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 207
Target Start/End: Original strand, 10730920 - 10731097
Alignment:
Q  28 gttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaactcaaat 127  Q
    |||||||||||| ||||| |||||||||||    | ||||||||| ||||||||  |||| ||||||||||||||||  || ||||| |||||||  ||     
T  10730920 gttttcattttggtcccataattaataaaaatggcattttggtccttcacttttttctccgtttgccaaataaatcccgactgttaactttaacttcaa- 10731018  T
Q  128 tatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
     |||||||||||  |||||| |||| ||||||  | |||| | | |||||||| | ||||||| |||| || ||||||||    
T  10731019 -atgtctatggtgaaccaaccttaaaagtggtctatcatataccttattaattttgttaattttaatcattcgatctttt 10731097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 48083362 - 48083426
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    |||||||||||  || ||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  48083362 atgtctatggtgcactaaccttaagagtggtctaccatagatcctattaattattttaatttaaa 48083426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 42684899 - 42685086
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctc-acagttaa 114  Q
    ||||||||| |||||||||||||| | ||| ||| |||||||   || |||| |||||||| ||||  ||   ||| |||||||||||||  || |||||    
T  42684899 aaataattttaagttttcattttggttccataatgaataaaactgacgttttagtccctcatttttttctatgtttaccaaataaatccttgactgttaa 42684998  T
Q  115 gtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    ||||||| | ||  |||||||||||  |||||  ||||||||||| ||||||| | | |||||| | |||||||||||| | ||||||||    
T  42684999 gtttaaccccaa--atgtctatggtgaaccaagcttaagagtggtccaccataaaccttattaaattttttaatttaaaccgtttgatct 42685086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 3455715 - 3455529
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||||||||||||||| || || || ||||||||   |  ||||||||| |||  |||  |||| |  | |||||||||||| |||||||| |||    
T  3455715 taatttcaagttttcattttggtctcataactaataaaactcatgttttggtccttcatgtttgtctccgtcagtcaaataaatcctgacagttaacttt 3455616  T
Q  119 aactc---aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    ||| |   |||  |||| |||||| ||||||| ||||||||||| ||||||||||| ||||||||| |||||| | || ||||||||||||    
T  3455615 aaccccccaaa--atgt-tatggtggaccaaccttaagagtggtccaccatagatcatattaatta-tttaatctcaaccctttgatcttt 3455529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 18442275 - 18442316
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  18442275 aaataatttcaagttttcattttggtcccacaattaataaaa 18442316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 19487349 - 19487390
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  19487349 aaataatttcaagttttcattttggtcccacaattaataaaa 19487390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 35372248 - 35372080
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| || ||||||||||||||    | |||| ||||||||| ||| ||||  ||||||||||||||||| || ||||| ||     
T  35372248 taatttcatgttttcattttggtctcacaattaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatccttactgttaactta 35372149  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    |  ||||   ||||||||| | |||||| ||||| |||||| || | |||| | |||||||| | |||||||    
T  35372148 acttcaa---atgtctatgttggaccaattttaaaagtggtccatcgtagaccttattaattttgttaattt 35372080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 37735329 - 37735416
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||||| |||||||||||||| ||||| ||||||||||| |||  |||| |||||||| ||||  || | |||| ||||||||||    
T  37735329 aaataattttaagttttcattttggtcccataattaataaaacgtatgttttagtccctcatttttttcttcgtttgtcaaataaatc 37735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 54110232 - 54110143
Alignment:
Q  161 caccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttagatcacgtaggtgtattttatctta 251  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||| |||||  || |||| || |||   |||||| ||||||||||||    
T  54110232 caccatagatcctattaatt-ttttaatttaaatcgtttgatttttttttaaaacgatgaccattggattttgtaggtctattttatctta 54110143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 55328395 - 55328333
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcactttt 81  Q
    |||||||||||||||||||||||| || ||||||||||||  |  |||| |||||||||||||    
T  55328395 taatttcaagttttcattttgatctcataattaataaaattcatgttttagtccctcactttt 55328333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 3210032 - 3209983
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    ||||||| ||||||||| || ||||||||||| |||||||||||||||||    
T  3210032 ggtcccttaaataattttaaattttcattttggtcccacaattaataaaa 3209983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 12105309 - 12105353
Alignment:
Q  12 cctcaaataatttcaagttttcattttgatcccacaattaataaa 56  Q
    |||||||||||||||||||||||| |||  |||||||||||||||    
T  12105309 cctcaaataatttcaagttttcatattggccccacaattaataaa 12105353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 24487280 - 24487177
Alignment:
Q  148 tttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttagatcacgtaggtgtattttat 247  Q
    ||||||| ||||  ||||||||||||||||||| |||||||||||||  | ||||||||| || || |||||||| || ||| | | || | ||||||||    
T  24487280 tttaagattggtcaaccatagatcctattaatt-ttttaatttaaattgtatgatcttttttttaaaggaggaccatttgattaagcagatctattttat 24487182  T
Q  248 cttac 252  Q
    |||||    
T  24487181 cttac 24487177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 44602991 - 44602944
Alignment:
Q  162 accatagatcctattaattattttaatttaaatcctttgatcttttatt 210  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  44602991 accatagatcctattaatt-ttttaatttaaaccgtttgatcttttatt 44602944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 36175317 - 36175461
Alignment:
Q  47 aattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaactcaaattatgtctatggtagaccaa 146  Q
    ||||||| ||| |||| ||||||| ||||| ||||  |||| ||||||||||||||||  || |||||||||||| | ||  ||||||||| | || |||    
T  36175317 aattaatgaaacgtacgttttggtgcctcatttttttctccgtttgccaaataaatccggactgttaagtttaaccccaa--atgtctatgatggatcaa 36175414  T
Q  147 ctttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    | |||    | || ||||||| ||||||||||||  |||||||||||    
T  36175415 cattatatatagtccaccatatatcctattaatttctttaatttaaa 36175461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 46368958 - 46369009
Alignment:
Q  144 caactttaagagtggtacaccatagatcctattaattattttaatttaaatc 195  Q
    |||||| ||||||| | ||||||| ||| |||||||||||||||||||||||    
T  46368958 caacttaaagagtgttccaccatatatcatattaattattttaatttaaatc 46369009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 12106629 - 12106686
Alignment:
Q  48 attaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    |||||||||| |||| ||||||||||||||||||  |||| |||  ||||||||||||    
T  12106629 attaataaaacgtacattttggtccctcacttttttctccgtttatcaaataaatcct 12106686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 23443556 - 23443463
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||| || |||||| || ||||||||||| ||||| ||||||||||| ||||||||  |||| |||  ||| | ||  |||||||||||||||    
T  23443556 tcccttaattaattttaacttttcattttggtcccaaaattaataaaacgtacctttaagtccttcatcttttcttctgtttgccaaataaatc 23443463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 24403265 - 24403322
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctca 76  Q
    |||||||||||||||||| || || || |||||||||||| ||  |||||||||||||    
T  24403265 taatttcaagttttcattatggtctcataattaataaaatttatgttttggtccctca 24403322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 28909561 - 28909524
Alignment:
Q  156 tggtacaccatagatcctattaattattttaatttaaa 193  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  28909561 tggtccaccatagatcctattaatttttttaatttaaa 28909524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 1e-85; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 8 - 271
Target Start/End: Complemental strand, 32798633 - 32798369
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| ||||  |||| |||| ||||||||||||||    
T  32798633 ggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttttctccgtttgtcaaataaatcctca 32798534  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    | |||||||||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||    
T  32798533 cggttaagtttaactcaaatgatgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatctttt 32798434  T
Q  208 -attaaatggaggaccgttagatcacgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
      ||||| ||||||||| | |||  ||||||||||||||||||||| ||||||||||| ||||||    
T  32798433 ctttaaaaggaggaccgctggattgcgtaggtgtattttatcttacgttgaaccatcaccactta 32798369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 44076464 - 44076257
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||||| ||| |||||||| ||||| |||| ||||| ||||||||||||||||  |    
T  44076464 ggtccctcaaataatttcaaatttttattttggtcccacaattaataaaacgtatcttttggtgcctcaatttttcctccgtttgccaaataaatcccta 44076365  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct-t 205  Q
    ||||||||||||| | ||||| ||||||||||| || |||| |||| | || | ||||||| ||| |||||||| |||||||||||| | |||||||| |    
T  44076364 cagttaagtttaaccccaaatgatgtctatggtggaacaacattaaaaatgatccaccataaatcttattaatttttttaatttaaaccatttgatctat 44076265  T
Q  206 ttattaaa 213  Q
    ||||||||    
T  44076264 ttattaaa 44076257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 32695376 - 32695170
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||  |||| |||| ||| ||||  |||||||||| | |||| |    
T  32695376 ggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtacgtttaagtccttcacgttttcctctgtttgccaaattagtcctga 32695277  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    | ||||||||||| | ||||| |||||||||||  |||||  |||||| |||| ||||||||||||||||||||||||||||||||| | |||||| |||    
T  32695276 ccgttaagtttaaccccaaatgatgtctatggtgaaccaatcttaagattggtccaccatagatcctattaattattttaatttaaaccgtttgattttt 32695177  T
Q  207 tattaaa 213  Q
    | |||||    
T  32695176 ttttaaa 32695170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 45281288 - 45281091
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcac 108  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||  ||  ||||| ||| |||  ||| ||||||||||||||||||||||  ||    
T  45281288 gtccctcaaataatttcaagttttcattttggtccaacaattaataaaaa-tatgttttgatccttcagattttcctccatttgccaaataaatcccaac 45281190  T
Q  109 agttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||||| |||||  ||||| ||||||| ||| ||||||| |||||||||||  |||||| |||||||||||  |||||||||||| | |||||||||||    
T  45281189 agttaactttaatccaaatgatgtctacggtggaccaaccttaagagtggtctaccataaatcctattaatatttttaatttaaaccgtttgatctttt 45281091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 3 - 204
Target Start/End: Original strand, 22551017 - 22551216
Alignment:
Q  3 caacaggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat 102  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||    
T  22551017 caacaggtccctcaaataatttcaagtttttattttggtcccacaattaataaaacgtatcttttggtccctcactttt-tctccatttgccaaataaat 22551115  T
Q  103 cct-cacagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttga 201  Q
    |||  |  |||||||||||| | ||  || |||||||| ||| ||| |||| |||| | ||||||| | | |||||| | || ||||||||| | |||||    
T  22551116 cctggattgttaagtttaaccccaa--atctctatggtggacaaaccttaaaagtgatccaccataaaccttattaaattttgtaatttaaaccgtttga 22551213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 42872290 - 42872120
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| ||||||||| ||||||||||||| ||| || ||| ||||||| |||| |||| |||| |||||||| ||||| |||| |||||||||||| |    
T  42872290 ggtcccttaaataattttaagttttcattttaatctcataatgaataaaacgtacgttttagtccttcactttttcctccgtttgtcaaataaatcctga 42872191  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaatt 180  Q
    | ||||| ||||| |||||   ||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  42872190 cggttaactttaacctcaa---atgtctatggtagaccaaccttaagagtggtctaccatagatcctattaatt 42872120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 26696558 - 26696644
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    ||||||||||||||||||||| |||||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||    
T  26696558 taatttcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcctccatttgccaaataaatcct 26696644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 252
Target Start/End: Original strand, 42870836 - 42871074
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| |||| |||||| |||||| | ||  |||||| ||| |||||| || ||||||    
T  42870836 aaataatttcaagttttcattttggtcccacaattaataaaacgtacgttttagtcccttactttttcgtctgtttgccgaatgaatcctgactgttaag 42870935  T
Q  116 tttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct-tttattaaa 213  Q
    ||||| | ||||  |||||||| || ||||||  ||||||||||| |||| |||| | |||||| | || ||||||||| | |||||||| | | |||||    
T  42870936 tttaaccccaaaagatgtctattgtggaccaatcttaagagtggtccaccgtagaccttattaaattttgtaatttaaaccgtttgatctgtgttttaaa 42871035  T
Q  214 tggaggaccgttagatcacgtaggtgtattttatcttac 252  Q
     ||| |||| ||  || ||| | ||||||||||||||||    
T  42871036 aggatgaccattgaattacgcatgtgtattttatcttac 42871074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 6397806 - 6398001
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    |||||||||||  ||||||||||| |||||||||||||||||  ||| |||| |||||||| ||||  |||| ||||||||||||||| | |  |||||     
T  6397806 aaataatttcatattttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtttgccaaataaatcatgaatgttaaa 6397905  T
Q  116 tttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaa 213  Q
    |||||||| ||  ||  |||||||| |||||| || | |||||| ||||||||| | |||||||| |||||||||||| | |||||||| || |||||    
T  6397906 tttaactccaa--ataactatggtaaaccaacctttacagtggtccaccatagaccttattaatttttttaatttaaaccatttgatctgtttttaaa 6398001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 13117723 - 13117554
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| ||||| |||||||||||    | |||| ||||||||| ||| ||||  ||||||||||||||||  ||  | ||||||    
T  13117723 taatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtttgccaaataaatcccgaccatcaagttt 13117624  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaat 188  Q
    ||| ||||| || | ||| || |||||||||||| |||||| || |||||||||||||||||||||||||    
T  13117623 aacccaaatgatctatatagtggaccaactttaaaagtggtccatcatagatcctattaattattttaat 13117554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 42098589 - 42098777
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| |||||||||||||||||    | ||||| |||| ||| |||  |||| ||||||||||||||||  || ||||| |||    
T  42098589 taatttcatgttttcattttggtcccacaattaataaaagtggcgttttgatcccccacgtttgtctccgtttgccaaataaatccg-actgttaatttt 42098687  T
Q  119 aactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||| | |||| |||||| |||| ||||||| |||| |||||| ||||||||||||||||||||| |||||||| || | |||||| ||||    
T  42098688 aaccccaaatgatgtctttggtggaccaaccttaaaagtggtccaccatagatcctattaattactttaatttcaaccgtttgatttttt 42098777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 4810484 - 4810679
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||| |||||| |||| |||||| ||||| ||||||||||| |||  ||||||||| |||  |||  |||| ||||||||||||||||  |    
T  4810484 ggtccctcaaatactttcaaatttttattttggtcccataattaataaaacgtatgttttggtccttcaaatttttctccgtttgccaaataaatcccga 4810583  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    | ||||| ||||| | ||||| ||||||||||| ||      ||||||||||| |||||||||||||||||||  ||||||||||||   ||||||||||    
T  4810584 cggttaactttaaccccaaatgatgtctatggtgga-----attaagagtggtccaccatagatcctattaatatttttaatttaaactgtttgatcttt 4810678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 31845775 - 31845653
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    |||||||||||  |||||||| ||||||||| |||||||| ||||||||||||||||||| ||||   ||||||||||| || || ||| |||| |||||    
T  31845775 atgtctatggtgaaccaactt-aagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatcttttttttaaaggatgaccattaga 31845677  T
Q  229 tcacgtaggtgtattttatcttac 252  Q
    | ||||||||||||||||||||||    
T  31845676 ttacgtaggtgtattttatcttac 31845653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 205
Target Start/End: Original strand, 30786691 - 30786888
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||| ||||||||||| ||||||||||||||||| || ||||||||||| |||  ||||| ||||||||||||  |||| |||||||||||||| |  |    
T  30786691 ggtccttcaaataattttaagttttcattttgatcacataattaataaaacgtatattttgatccctcacttttttctccgtttgccaaataaattccga 30786790  T
Q  108 cagttaa--gtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctt 205  Q
    | |||||   |||||||| ||  ||||||||||| || ||||||||| |||||| || |||| | | |||||||| | ||||||| || | |||||||||    
T  30786791 ctgttaactttttaactctaa--atgtctatggtggatcaactttaaaagtggtccatcataaaccttattaattttgttaattttaaccgtttgatctt 30786888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 30787696 - 30787604
Alignment:
Q  13 ctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||| ||  |||||||||||||||||| | ||| |||||||||||||||||    
T  30787696 ctcaaataattttaagttttcattttggtcccataattaataaaatatatattttggtccctcactttttcttccgtttgccaaataaatcct 30787604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 28418821 - 28418916
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||   || |||| ||||||||||||| ||||| |||||||||||||||    
T  28418821 ggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatc 28418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 9854860 - 9854782
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||||||| | |||||| ||||    
T  9854860 atgtctatggtggaccaactttaagagtggtccaccatagatcctattaattcttctaatttaaaccatttgatttttt 9854782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 24192644 - 24192566
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||| ||||    
T  24192644 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatttttt 24192566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 8570144 - 8570229
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||| |||||||||||| ||| ||||||||||||| |||| ||||||||||||||||||  |||  ||||||||||||||||    
T  8570144 taatttcacgttttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttgtctctgtttgccaaataaatcc 8570229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 32797153 - 32797245
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataa 100  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||| |||| |||  ||||||||  ||| ||||| ||| ||||||||    
T  32797153 ggtcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttaccaaataa 32797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 32693856 - 32693959
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||| |||||||||||||| |||||||||||||||||  |||  |||||||| |||  ||| ||||| ||||||||||||||||  |||||||| |||    
T  32693856 taattttaagttttcattttggtcccacaattaataaaacatacgctttggtccttcagattttcctccgtttgccaaataaatcccaacagttaacttt 32693955  T
Q  119 aact 122  Q
    ||||    
T  32693956 aact 32693959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 20180655 - 20180577
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||||||| || ||| ||| ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||    
T  20180655 atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatctttt 20180577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 42877645 - 42877827
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||||||||||||||| || || || ||||||||   |  |||||||||||||| |||  || | |  | |||||||||||  || ||||| |||    
T  42877645 taatttcaagttttcattttggtctcataactaataaaactcatgttttggtccctcacgtttgtcttcgtcagtcaaataaatcccgacggttaacttt 42877744  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    ||| | ||  |||| |||||| ||||||| |||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||    
T  42877745 aaccccaa--atgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaatta-tttaatttcaaccctttgatct 42877827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 10669426 - 10669362
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    |||||||||||  |||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  10669426 atgtctatggtgaaccaaccttaagagtggtccaccatagatcctattaaatattttaatttaaa 10669362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 13116356 - 13116525
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| |||||||||||||||||    | |||| |||| |||| ||| ||||| ||||||||||||||||  || ||||| |||    
T  13116356 taatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccttcacattttcctccgtttgccaaataaatcccgactgttaacttt 13116455  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||||| ||  ||||||||  ||||||||  || |||||||| || | |||| ||||||| || | |||||||    
T  13116456 aactccaa--atgtctataatagaccaatcttcagagtggtccatcgtagaccctattacttttgttaattt 13116525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 17339639 - 17339535
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||  ||||||||||| ||| |||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||| || |||||||||    
T  17339639 taatttcatattttcattttggtccaacaattaataaaaatggcattttagtccctcacgttttcctccgtttgccaaataaatcctgactgttaagttt 17339540  T
Q  119 aactc 123  Q
    |||||    
T  17339539 aactc 17339535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 17455185 - 17455305
Alignment:
Q  132 tctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttagatca 231  Q
    |||||| ||||||||  |||| |||||| ||||||||||| |||||||||||||||||| || | ||| |||| || || ||  ||||||| |||||| |    
T  17455185 tctatgctagaccaatcttaaaagtggtccaccatagatcttattaattattttaatttgaaccgttttatctattttttaaaagaggaccattagatta 17455284  T
Q  232 cgtaggtgtattttatcttac 252  Q
    || |||| |||||||||||||    
T  17455285 cgcaggtctattttatcttac 17455305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 28420275 - 28420180
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||   || |||| |||||||| |||| ||||| |||| ||||||||||    
T  28420275 ggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgtcaaataaatc 28420180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 193
Target Start/End: Complemental strand, 8571707 - 8571533
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca--cagttaagt 116  Q
    ||||||||  ||||||||||| ||  ||||||||||||| |||| ||||||||| ||| ||||  |||| ||| ||||||||||||  |  | |||||||    
T  8571707 taatttcacattttcattttggtcatacaattaataaaacgtacgttttggtccttcatttttttctccgtttaccaaataaatccctagtctgttaagt 8571608  T
Q  117 ttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    ||||| | ||  ||||||||||| |||||||||||| | |||| ||||||| | | ||||||   ||||||||||||    
T  8571607 ttaaccccaa--atgtctatggtggaccaactttaaaaatggtccaccatataccttattaaactttttaatttaaa 8571533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 41629731 - 41629819
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||||||||||||| |||||| || |||||||||||||| |||  ||||| |||||||  ||| | ||| ||||||||||||||||    
T  41629731 aaataatttcaagtttttattttggtctcacaattaataaaacgtatattttgatccctcaagttttcttccgtttgccaaataaatcc 41629819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 13198034 - 13197963
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctcc 87  Q
    |||||||||| ||||||| ||||| ||||||||||||||||| |||| |||  ||||||||||||| |||||    
T  13198034 aaataatttcgagttttcgttttggtcccacaattaataaaaggtacgtttaagtccctcactttttcctcc 13197963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 211612 - 211706
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||||   || |||| |||||| | ||||  |||| ||| ||||||||||||    
T  211612 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatcc 211706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 240644 - 240550
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||||   || |||| |||||| | ||||  |||| ||| ||||||||||||    
T  240644 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatcc 240550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 725235 - 725329
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||||   || |||| |||||| | ||||  |||| ||| ||||||||||||    
T  725235 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatcc 725329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 793999 - 793905
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||||   || |||| |||||| | ||||  |||| ||| ||||||||||||    
T  793999 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatcc 793905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 38696443 - 38696521
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||||||||||| |||| |||||| |||||||||||  ||||||| || |||||| || |||||||| ||||    
T  38696443 atgtctatggtagaccaaccttaaaagtggtccaccatagatctaattaatttttataattttaaccctttgatttttt 38696521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 40437567 - 40437513
Alignment:
Q  139 tagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    ||||||||| |||| |||||| |||| ||||||||||||||||||||||||||||    
T  40437567 tagaccaaccttaaaagtggtccaccgtagatcctattaattattttaatttaaa 40437513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 42362731 - 42362666
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatc 195  Q
    ||||||||||| ||||||| ||||||||||| || ||||||||||||||||| ||||||||| ||||    
T  42362731 atgtctatggtggaccaacattaagagtggttcatcatagatcctattaatt-ttttaatttcaatc 42362666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 17338067 - 17338151
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||||| |||||||||||| |||||||||||||||||    | |||| ||||||||| |||  |||| |||||||||||||||    
T  17338067 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgtttgccaaataaatc 17338151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 26697912 - 26697820
Alignment:
Q  29 ttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaac 121  Q
    ||||||||||  ||||| ||||||||||| |||| |||| ||||||||||||| | ||| |||| | |||||||||| |  ||||||||||||    
T  26697912 ttttcattttagtcccataattaataaaacgtacgttttagtccctcactttttcttccttttgtcgaataaatcctaattgttaagtttaac 26697820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 42100196 - 42100027
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| || ||||||||||||||    | ||||| |||||||  ||| ||||| |||||||||||| |||  || ||||| |||    
T  42100196 taatttcatgttttcattttggtctcacaattaataaaaatggcgttttgatccctcatattttcctccgtttgccaaataattcccgactgttaacttt 42100097  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||||  ||  |||||| |||| ||||||| |||| |||||| || | |||| | |||||||| | |||||||    
T  42100096 aacttcaa--atgtctttggtggaccaaccttaaaagtggtccatcgtagaccttattaattttgttaattt 42100027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 42878806 - 42878735
Alignment:
Q  134 tatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    |||||| ||||||| ||||| ||||| ||||||||||||||||||||| |||||| | || ||||||||||||    
T  42878806 tatggtggaccaaccttaagtgtggtccaccatagatcctattaatta-tttaatcttaaccctttgatcttt 42878735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 45437572 - 45437534
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaa 57  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  45437572 taatttcaagttttcattttgatcccataattaataaaa 45437534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 43202246 - 43202295
Alignment:
Q  144 caactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    |||| ||||||||||| ||||||||||||||||| |||||| ||||||||    
T  43202246 caaccttaagagtggtccaccatagatcctattagttatttaaatttaaa 43202295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 32798251 - 32798203
Alignment:
Q  414 tagatctgatcaactcttcaaagccaatcacataatcccttccacaaac 462  Q
    ||||||| || |||||||| ||||||||||| |||||||||||||||||    
T  32798251 tagatctcataaactcttctaagccaatcacgtaatcccttccacaaac 32798203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 45279703 - 45279763
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctca 76  Q
    |||||||||||| ||||||||||  ||  ||||||||||||| |||| |||||||||||||    
T  45279703 aaataatttcaaattttcattttagtcatacaattaataaaacgtacgttttggtccctca 45279763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 29103527 - 29103598
Alignment:
Q  33 cattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||| ||||||||||||||||| |||| |||  |||||||| |||| |||||  |||| ||||||||||    
T  29103527 cattttggtcccacaattaataaaacgtacatttgagtccctcattttttcctccgattgctaaataaatcc 29103598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 29104450 - 29104371
Alignment:
Q  24 tcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||| |||| |||||||||||||||||||||||| |||  |||  |||||||| |||| ||||  |||| ||||||||||    
T  29104450 tcaaatttttattttgatcccacaattaataaaacgtatgtttaagtccctcattttttcctctgtttgtcaaataaatc 29104371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 37400942 - 37400993
Alignment:
Q  156 tggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||| |||||||||||||||||||| ||||||| |||| | |||||||||||    
T  37400942 tggtccaccatagatcctattaatttttttaatataaaccgtttgatctttt 37400993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 45394984 - 45395031
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    ||||| || |||||| |||||||||||||||||||| |||||||||||    
T  45394984 tcccttaattaattttaagttttcattttgatcccataattaataaaa 45395031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 14840880 - 14840807
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    ||||||||||| ||||||| |||| |||| | |||||||| || |||||| | |||||||||||| | ||||||    
T  14840880 atgtctatggtggaccaacattaaaagtgatccaccatagttcttattaaattttttaatttaaaccgtttgat 14840807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 38697107 - 38697058
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    |||||||||| ||||||| ||||||||||||| ||||| || ||||||||    
T  38697107 ggtccctcaattaatttccagttttcattttggtcccataactaataaaa 38697058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 41630217 - 41630152
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcactttt 81  Q
    ||||||||| || ||||||||||  || |||||||||||||| ||||||||  |||||||| ||||    
T  41630217 aaataattttaaattttcattttagtctcacaattaataaaacgtacctttaagtccctcaatttt 41630152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 6398577 - 6398485
Alignment:
Q  29 ttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaac 121  Q
    ||||||||||| || || |||||||||||    | |||| |||||||| |||| ||||| |||| |||||||||| | || ||||||||||||    
T  6398577 ttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttcctccgtttgtcaaataaatcatgactgttaagtttaac 6398485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 12850496 - 12850464
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttga 40  Q
    |||||||||||||||||||| ||||||||||||    
T  12850496 ggtccctcaaataatttcaaattttcattttga 12850464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 1e-73; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 8 - 271
Target Start/End: Complemental strand, 7311825 - 7311562
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||   || ||||||||||||||||||||    
T  7311825 ggtcccttaaataattttaagttttcattttgatcccacaattaataaac-gtaccttttggtcccttacttttttatctatttgccaaataaatcctca 7311727  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttga-tcttt 206  Q
    |||||||||||||  ||||| |||||||||||  |||||| ||||||||||| ||||||| ||||||||||||||||||||||||| | ||||| | |||    
T  7311726 cagttaagtttaatccaaatgatgtctatggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaatttaaaccgtttgatttttt 7311627  T
Q  207 tattaaatggaggaccgttagatcacgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
    | || || | ||||||||| |||||| ||| ||||||||||||||| ||||||||||||||||||    
T  7311626 tgtttaaagcaggaccgttggatcacatagatgtattttatcttacgttgaaccatcaacactta 7311562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 29381810 - 29381632
Alignment:
Q  29 ttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaactc-aaat 127  Q
    |||||||||||||||||||||||||||||   || |||| |||| |||  ||| ||||| ||| ||||||||||||  ||||||||||||||| | ||||    
T  29381810 ttttcattttgatcccacaattaataaaaatgacgttttagtccttcatcttttcctccgtttaccaaataaatcca-acagttaagtttaaccccaaat 29381712  T
Q  128 tatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
     |||||| |||| ||| ||| ||||||||| | |||||||||||||||||||||||||||||| || | |||||| ||||    
T  29381711 gatgtctgtggtggacaaaccttaagagtgatccaccatagatcctattaattattttaatttcaaccgtttgatttttt 29381632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 5187712 - 5187541
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| ||||| |||||||||||    | |||| || ||| || |||   ||| ||||||||||||||||| || |||||||||    
T  5187712 taatttcatgttttcattttggtcccataattaataaaaatggcgttttagttccttacctttttgtccgtttgccaaataaatcctgacggttaagttt 5187613  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||| |||||  ||||||| || ||||||| |||| |||||| |||||||||||||||||||||| |||||||    
T  5187612 aacccaaatgttgtctatagtggaccaaccttaaaagtggttcaccatagatcctattaattatattaattt 5187541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 17837651 - 17837813
Alignment:
Q  28 gttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaactc-aaa 126  Q
    |||||||||||| | |||||||||||||||    | |||| ||||||||  ||| | ||| ||| ||||||||||||  ||||||||||||||| | |||    
T  17837651 gttttcattttggttccacaattaataaaaatggcgttttagtccctcatcttttcttccgtttaccaaataaatcca-acagttaagtttaaccccaaa 17837749  T
Q  127 ttatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    | ||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  17837750 tgatgtctatggtggacaaacattaagagtggtccaccatagatcctattaattattttaattt 17837813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 23392240 - 23392428
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||  |||||||||||| |||||||||||||||||    | |||  ||||||||| ||| ||||| ||||||||||||||||| |  |||||||||    
T  23392240 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 23392339  T
Q  119 aactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||| | |||| ||| ||| ||| || |||| |||| |||||| |||||||||||||||||||||||||||||| || | |||||| ||||    
T  23392340 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatatttt 23392428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 18346840 - 18346646
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||  ||||||||||| |||||||||||||||||    | ||||| |||||||| |||  |||  ||||||||||||||||  || ||||| |||    
T  18346840 taatttcatattttcattttggtcccacaattaataaaaatggcgttttgatccctcacgtttgtctctgtttgccaaataaatccg-actgttaatttt 18346742  T
Q  119 aac-tcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaa 213  Q
    ||| |||||| |||| || |||  |||||| ||||||||||| ||| ||| ||||||||||||||||||||||||| | |||||| |||| |||||    
T  18346741 aacctcaaatgatgtttacggtgaaccaaccttaagagtggtccactataaatcctattaattattttaatttaaaccgtttgatttttttttaaa 18346646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 34024160 - 34024073
Alignment:
Q  13 ctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataa 100  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| ||||| |||| |||||||    
T  34024160 ctcaaataatttcaaattttcattttggtcccacaattaataaaatgtacattttgatccctcactttttcctccgtttgtcaaataa 34024073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 34023901 - 34023980
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctcc 87  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||| ||| |||||    
T  34023901 ggtccctcaaataattttaagttttcattttggtaccacaattaataaaacgtaccttttggtccctcaccttttcctcc 34023980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 6452604 - 6452453
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcacagtt-a 113  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||| |||  |||||||| |||| ||||| |||||||||||||||| | || ||| |    
T  6452604 aaataatttcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccgtttgccaaataaatccttgaccgttaa 6452505  T
Q  114 agtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccata 167  Q
    |||||||| ||||  || ||||| ||  | |||||||||||||||| |||||||    
T  6452504 agtttaacccaaa--atatctatagtgtatcaactttaagagtggtccaccata 6452453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 6452307 - 6452396
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    |||||||||||||||||| ||||| ||| | ||||||||||| |||| |||| ||||||||||||| ||||| |||||||||||||||||    
T  6452307 aaataatttcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccgtttgccaaataaatcct 6452396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 232191 - 232285
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||   || |||| ||||||||||||| ||||| ||||||||||||||||    
T  232191 ggtcccttaaataatttcaatttttcattttggtcccataattaataaaa--cacgttttagtccctcactttttcctccgtttgccaaataaatcc 232285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 414 - 507
Target Start/End: Complemental strand, 7311431 - 7311339
Alignment:
Q  414 tagatctgatcaactcttcaaagccaatcacataatcccttccacaaacnnnnnnnnnccttcatcttcatcccttctccaaattctctcatca 507  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||         ||||||||||||||||| ||||||||||||||||||    
T  7311431 tagatctcatcaactcttcaaagccaatcacctaatcccttccacaaac-taaaaaatccttcatcttcatccctcctccaaattctctcatca 7311339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 23397444 - 23397275
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||  |||||||||||| |||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||  || ||||| |||    
T  23397444 taatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccgaccgttaaattt 23397345  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||||  ||  ||||||||||| ||||||| |||| ||| || |||| || | | |||||||| | |||||||    
T  23397344 aacttcaa--atgtctatggtggaccaaccttaaaagtagtccaccgtataccttattaattttgttaattt 23397275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 15730131 - 15730036
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaat-aaaatgtaccttttggtccctcacttttccctccatttgccaaataaat 102  Q
    |||||||||| ||||||| | ||||||||||| ||||||||||||| ||||  ||| |||||||||||||||||| | ||| ||||| ||||||||    
T  15730131 ggtccctcaattaatttccatttttcattttggtcccacaattaataaaaaaatacattttggtccctcactttttcttccgtttgctaaataaat 15730036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 11722921 - 11722999
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||| |||| ||||||| | |||| ||||||||||||||||||||||| ||||||||| | |||||| ||||    
T  11722921 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttt 11722999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 2687256 - 2687341
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||| ||||||||||||||||||||||||||||||    | |||| |||| |||| ||| ||||| ||||||||||||||||    
T  2687256 taatttcatgttttcattttgatcccacaattaataaaaatggcgttttagtccttcacattttcctccgtttgccaaataaatcc 2687341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 27080941 - 27081034
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||| |||||||||| ||||||||||||| ||  |||||||||||||| ||| |||  |||||||||||||  |||| ||||| |||||||||    
T  27080941 tcccttaaataatttcgagttttcattttggtcttacaattaataaaatttacatttaagtccctcacttttttctccgtttgcgaaataaatc 27081034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 6702960 - 6702857
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||  ||||||||||| |||||||||||||||||    | ||||  |||||||| ||| ||||| ||||||||||||||||| || |||||||||    
T  6702960 taatttcatattttcattttggtcccacaattaataaaaatggcgtttta-tccctcacgttttcctccgtttgccaaataaatcctgactgttaagttt 6702862  T
Q  119 aactc 123  Q
    |||||    
T  6702861 aactc 6702857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 12669746 - 12669936
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc-ctcacagttaa 114  Q
    ||||||| | || |||| |||||| || ||||||||||||||   |  |||| |||| |||||||| ||||| ||||| ||||||||| || || |||||    
T  12669746 aaataatattaaatttttattttggtctcacaattaataaaactcaagttttagtccgtcactttttcctccgtttgctaaataaatctctaactgttaa 12669845  T
Q  115 gtttaac-tcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
     |||||| ||||||   || |||||| ||||||| ||||||||||| ||||||||||| ||||| || | ||||| ||||   |||||||||||    
T  12669846 ctttaacctcaaat---gtgtatggtggaccaaccttaagagtggtccaccatagatcatattatttttattaatataaactatttgatctttt 12669936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 17839229 - 17839126
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||  |||||||||||| |||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||  || ||||| |||    
T  17839229 taatttcttgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccgaccgttaatttt 17839130  T
Q  119 aact 122  Q
    ||||    
T  17839129 aact 17839126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 32507116 - 32506977
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcacagttaagtt 117  Q
    |||||||| |||||||||||||||||||| |||||||||      |||| ||||||||| |||  |||  |||||||||||||||| | || ||||||||    
T  32507116 taatttcatgttttcattttgatcccacatttaataaaaatggtgttttagtccctcacatttttctcagtttgccaaataaatccttgactgttaagtt 32507017  T
Q  118 taactcaaattatgtctatggtagaccaactttaagagtggt 159  Q
    |||| | ||  || |||||||| ||||||| |||||||||||    
T  32507016 taaccccaa--atatctatggtggaccaaccttaagagtggt 32506977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 29722689 - 29722773
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||||| |||||||||||||||||| |||||||||||    | |||| ||||||||| ||| |||||||||  ||||||||||    
T  29722689 taatttcatgttttcattttgatcccataattaataaaaatggcgttttagtccctcacattttcctccattttgcaaataaatc 29722773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 27967150 - 27967055
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||| ||  ||| ||||| ||| | | |||| ||| | ||||||||| |||||    
T  27967150 ggtcccccaaataattcctagttttcattttgatcccacaattaatagaacatacattttgatcctttaatttttcctacgtttgccaaaaaaatc 27967055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 6701406 - 6701490
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||||  ||||||||||| |||||||||||||||||      |||| ||||||||| ||| ||||| |||||||||||||||    
T  6701406 taatttcatattttcattttggtcccacaattaataaaaatggtattttagtccctcacattttcctccgtttgccaaataaatc 6701490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 11967351 - 11967415
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    |||||||| || ||||||| || |||| ||| || |||||||| |||||||||||||||||||||    
T  11967351 atgtctattgtggaccaaccttgagaggggtccatcatagatcatattaattattttaatttaaa 11967415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 27082236 - 27082172
Alignment:
Q  17 aataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcactttt 81  Q
    ||||||||| | ||||||||||| ||||||||||||||||| |||  |||  |||||||||||||    
T  27082236 aataatttcgaattttcattttggtcccacaattaataaaaagtatgtttaagtccctcactttt 27082172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 5186594 - 5186697
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| || ||||||||||||||   || ||||  ||| |||  ||| ||||| ||||||||||||||||  || ||||| |||    
T  5186594 taatttcatgttttcattttggtcacacaattaataaaagtgacgttttaatccatcatcttttcctccgtttgccaaataaatcccgaccgttaacttt 5186693  T
Q  119 aact 122  Q
    ||||    
T  5186694 aact 5186697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 29380217 - 29380320
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||  |||||||||||| |||||||||||| ||||    | |||| ||||||||| ||| | ||| ||||||||||||||||  || ||||| |||    
T  29380217 taatttcttgttttcattttggtcccacaattaacaaaaatggcgttttagtccctcaccttttcttccgtttgccaaataaatcccgaccgttaatttt 29380316  T
Q  119 aact 122  Q
    ||||    
T  29380317 aact 29380320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 233657 - 233616
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    |||||||||||| ||||||||||| ||||| |||||||||||    
T  233657 aaataatttcaatttttcattttggtcccataattaataaaa 233616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 2688014 - 2687929
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||| |||||||||||  |||||||||||||||||    | |||| ||||||||| |||   ||| ||||||||||||||||    
T  2688014 taatttcatgttttcattttagtcccacaattaataaaaatggcgttttagtccctcacctttttatccgtttgccaaataaatcc 2687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 7310299 - 7310340
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    ||||||||| |||||||||||||| ||||| |||||||||||    
T  7310299 aaataattttaagttttcattttggtcccataattaataaaa 7310340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 6e-63; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 9 - 202
Target Start/End: Complemental strand, 45585109 - 45584915
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcac 108  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||| ||    
T  45585109 gtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccgtttgccaaataaatcctgac 45585010  T
Q  109 agttaagttt-aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
     ||||||||| ||| ||||| ||||||||||| | ||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||    
T  45585009 cgttaagtttaaacccaaatgatgtctatggtggcccaactttaagagtgctccaccatagatcctattaattattttaatataaatcgtttgat 45584915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 15232778 - 15232947
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| ||||| |||||||||||    | |||| ||||||||| ||| ||||  ||||||||||||||| | || |||||||||    
T  15232778 taatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtttgccaaataaatcatgaccgttaagttt 15232877  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaat 188  Q
    ||| ||||| |||| ||| || |||||||||||| |||||| || |||||||||||||||||||||||||    
T  15232878 aacccaaatgatgtatatagtggaccaactttaaaagtggtccatcatagatcctattaattattttaat 15232947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 15072880 - 15072693
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcacagttaagtt 117  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| | |||| ||||| |||||||||||||||| |  | ||||| ||    
T  15072880 taatttcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcctccgtttgccaaataaatccatgtctgttaactt 15072781  T
Q  118 taa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||| |||||   ||||||||||| ||||||| | ||||||||| |||| ||||  ||||||||| | |||||||||||  |||||||||||    
T  15072780 taacctcaa---atgtctatggtggaccaacctaaagagtggtccaccgtagactctattaattttcttaatttaaattgtttgatctttt 15072693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 35943540 - 35943289
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca--cagtta 113  Q
    |||||||||||| |||| |||||| ||||||||||||||||| |||| ||||||||| |||||||| ||| | |||||||||||||||| |   | ||||    
T  35943540 aaataatttcaaatttttattttggtcccacaattaataaaacgtacattttggtcc-tcactttttccttcgtttgccaaataaatcccctggctgtta 35943442  T
Q  114 agtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcc-tttgatcttttattaa 212  Q
    |||||||| | ||  ||||||||||| ||||||| ||||||||| | ||||||||| | |||||| | ||||| |||||| || ||||||||||| || |    
T  35943441 agtttaaccctaa--atgtctatggtggaccaaccttaagagtgatccaccatagaccttattaaattttttattttaaaaccgtttgatctttttttga 35943344  T
Q  213 atggaggaccgttagatcacgtaggtgtattttatcttacattgaaccatcaaca 267  Q
    | ||| |||| ||  || ||| |||| |||||||||||||  |||||||| ||||    
T  35943343 aaggatgaccattgaattacgcaggtctattttatcttacgatgaaccattaaca 35943289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 52628974 - 52628861
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| |||| ||||| |||||||||||||||   |    
T  52628974 ggtcccttaaataatttcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgccaaataaatctcaa 52628875  T
Q  108 cagttaagtttaac 121  Q
    | ||||||||||||    
T  52628874 ccgttaagtttaac 52628861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 27814309 - 27814457
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcaca 109  Q
    |||||||||||||||||||||||||||||  ||| | ||||||||||| |||||||||||||||||| |||| ||||  ||||||||||||||||  ||     
T  27814309 tccctcaaataatttcaagttttcattttagtcctataattaataaaacgtaccttttggtccctcattttttcctctgtttgccaaataaatcccgacg 27814408  T
Q  110 gttaa-gtttaactcaaattatgtctatggtagaccaactttaagagtggt 159  Q
    |||||  |||||||| ||  ||||||||||| |||||||||||| ||||||    
T  27814409 gttaacttttaactctaa--atgtctatggtggaccaactttaaaagtggt 27814457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 52078125 - 52078003
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    |||||||||||  |||||| ||||||||| |||||||||||||||||||||||||||||||| || | |||||| |||| | ||| |||||||| |||||    
T  52078125 atgtctatggtgaaccaaccttaagagtgatacaccatagatcctattaattattttaattttaaccgtttgattttttttaaaaaggaggaccattaga 52078026  T
Q  229 tcacgtaggtgtattttatctta 251  Q
    | ||||| |||||||||||||||    
T  52078025 ttacgtaagtgtattttatctta 52078003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 50444799 - 50444651
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||| |||| ||||||||||||| |||| |||||  |||||||||||||||  |    
T  50444799 ggtccctcaaataatttcaaattttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccgattgccaaataaatccaaa 50444700  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtg 157  Q
    | ||||| |||||||| ||  | ||||||| | ||||||| |||||||||    
T  50444699 ccgttaactttaactccaa-aacgtctatgttggaccaaccttaagagtg 50444651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 14477884 - 14477732
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcacagttaa 114  Q
    ||||||||| ||||||||| |||||||||||||||||||||| |||| |||  |||||||||||||  |||| |||||||||||||||| ||   |||||    
T  14477884 aaataattttaagttttcactttgatcccacaattaataaaacgtacgtttaagtccctcacttttttctccgtttgccaaataaatccttcgatgttaa 14477785  T
Q  115 gtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccataga 169  Q
    ||||||||| ||  |||||||||||||| |||  |||||||| || |||||||||    
T  14477784 gtttaactctaa--atgtctatggtagatcaatcttaagagttgtccaccataga 14477732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 16965207 - 16965045
Alignment:
Q  29 ttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaactc-aaat 127  Q
    ||||||||||| |||||||||||||||||   || |||| |||||| || ||| | ||| |||  ||||||||| |  |  |||||||||||| | ||||    
T  16965207 ttttcattttggtcccacaattaataaaaatgacgttttagtcccttacattttcttccgtttatcaaataaattccgatggttaagtttaaccccaaat 16965108  T
Q  128 tatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
     |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16965107 gatgtatatggtggaccaactttaagagtggtccaccatagatcctattaattattttaattt 16965045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 34352056 - 34351984
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcactttt 81  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34352056 gtcccttaaataattttaagttttcattttggtcccacaattaataaaatgtaccttttggtccctcactttt 34351984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 46111589 - 46111493
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| ||||| |||| ||| | ||||||||||||||||    
T  46111589 ggtcccttaaataatttcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttccttcgtttgccaaataaatcc 46111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 14470879 - 14471029
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcacagttaa 114  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||  ||  ||||||||||||| ||| | |||||||||||||||| ||   |||||    
T  14470879 aaataatttcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttccttcgtttgccaaataaatccttcggtgttaa 14470978  T
Q  115 gtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccata 167  Q
    ||||||| | ||  | |||||| || ||||||| ||||||||||| |||||||    
T  14470979 gtttaaccccaa--acgtctatagtggaccaaccttaagagtggtccaccata 14471029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 15071365 - 15071453
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||||||||||||||||||| || || ||||||||||| |||  |||||||||||||||||| ||||| ||| ||||||||||||    
T  15071365 aaataatttcaagttttcattttggtcacataattaataaaacgtatgttttggtccctcactttttcctccgtttaccaaataaatcc 15071453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 16123310 - 16123497
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat-cctcacagttaa 114  Q
    ||||||||| |||||||||||||| | ||||||||||||||||  || |||| |||||||| |||| | ||| |||||||||||||| |||    |||||    
T  16123310 aaataatttaaagttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgtttgccaaataaatccctggttgttaa 16123409  T
Q  115 gtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    |||||| |||||   |||||||||||||||||||||||| |||| | ||||||| | | ||||||   ||||| |||||| ||||| ||||    
T  16123410 gtttaatctcaa---atgtctatggtagaccaactttaaaagtgatccaccatataccttattaaaatttttagtttaaaccctttaatct 16123497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 24499748 - 24499660
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||||||||||||||||||| || ||||||||||||||   || |||||||||||||||||| ||||| ||| ||||||||||||    
T  24499748 aaataatttcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctccgtttaccaaataaatcc 24499660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 49801653 - 49801831
Alignment:
Q  29 ttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaac-tcaaat 127  Q
    ||||||||||| |||||||||||||||||      ||||| |||||||| |||  |||  ||||||||||||||||  || ||||| |||||| ||||||    
T  49801653 ttttcattttggtcccacaattaataaaaatggtgttttgatccctcacgtttgtctctgtttgccaaataaatccg-actgttaattttaacctcaaat 49801751  T
Q  128 tatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
     |||| || |||| |||||| |||| |||||| ||||||| || |||||||||||||||||||||| | |||||| ||||    
T  49801752 gatgtttacggtaaaccaaccttaaaagtggtccaccataaattctattaattattttaatttaaaccgtttgatttttt 49801831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 9226196 - 9226118
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||| || |||| |||| |||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  9226196 atgtctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttaaattgtttgatctttt 9226118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 44278439 - 44278353
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    ||||||||||||||||||||| |||||| |||||||||| |||| ||||||||||||| ||||  |||| ||||||||||| |||||    
T  44278439 taatttcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttgccaaatagatcct 44278353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 48527669 - 48527747
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||| ||||||||||||||||||| ||||||||||| ||| |||||||||||||||||   |||||||||||    
T  48527669 atgtctatggtcgaccaactttaagagtggtccaccatagatcttatcaattattttaatttaaactgtttgatctttt 48527747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 13147397 - 13147332
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaat 194  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||||||||||    
T  13147397 atgtctatggtggaccaaccttaatagtggtccaccatagatcctattaattattttaatttaaat 13147332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 252
Target Start/End: Complemental strand, 48097046 - 48096891
Alignment:
Q  94 caaataaatcctcacagttaagtttaac-tcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaa 192  Q
    |||||||||||  || |||||||||||| ||||||   || |||||| ||||||| |||||||||||  ||||||||||||||||||||||| ||| | |    
T  48097046 caaataaatccctactgttaagtttaacctcaaat---gtatatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatatta 48096950  T
Q  193 atcctttgatcttttattaaatggaggaccgttagatcacgtaggtgtattttatcttac 252  Q
    ||| ||||||||||| ||  |  ||||||| || ||| || |||||||||||||||||||    
T  48096949 atcgtttgatcttttttttta-cgaggaccattggattacataggtgtattttatcttac 48096891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 23091377 - 23091527
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca--cagttaagt 116  Q
    ||||||||  ||||||||||| |   ||||||||||||| |||| |||||||| |||||||||  |||| ||||||||||||||||  |  | |||||||    
T  23091377 taatttcacattttcattttggttttacaattaataaaacgtacgttttggtcactcacttttttctccgtttgccaaataaatccctagtctgttaagt 23091476  T
Q  117 ttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccataga 169  Q
    |||| |||||   ||||||||||| |||||||||||| |||||| |||||||||    
T  23091477 ttaatctcaa---atgtctatggtggaccaactttaaaagtggtccaccataga 23091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 51445725 - 51445848
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    ||||||||||| || ||||||||| | |||| ||||||||||||||||||||||| ||||||||| | |||||| |||| | ||  |||||  | || ||    
T  51445725 atgtctatggtggatcaactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgattttttttaaacaggagggtcattgga 51445824  T
Q  229 tcacgtaggtgtattttatcttac 252  Q
    | ||| ||||||||||||||||||    
T  51445825 ttacgcaggtgtattttatcttac 51445848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 9485285 - 9485219
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatc 195  Q
    ||||||||||| || ||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  9485285 atgtctatggtggatcaactttaagagtggttaaccataaatcctattaattattttaatttaaatc 9485219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 16963860 - 16964043
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| |||||||||||||||||      |||| ||||||||  ||| ||||| |||||||||||||| || || ||||| |||    
T  16963860 taatttcatgttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgtttgccaaataaatgctgactgttaacttt 16963959  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    ||||| ||  |||| |||| | ||||||| |||| |||||| || |||||| | |||||||| | ||||||| || |||| |||||    
T  16963960 aactctaa--atgtttatgatggaccaaccttaaaagtggtccatcatagaccttattaattttgttaattttaacccttcgatct 16964043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 41872602 - 41872775
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||| ||||||||||||||  ||||||||||||| |||| |||  ||| ||||||||| ||||| ||||||||||||||| |    |||||||||    
T  41872602 taatttcaacttttcattttgatcatacaattaataaaacgtacgtttaagtctctcactttttcctccgtttgccaaataaatcattggtgttaagttt 41872701  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    ||| |  |  |||||||||||  |||||  |||||| | || ||||||||| | |||||| | ||||||||||||    
T  41872702 aaccccca-aatgtctatggtgaaccaatcttaagattagttcaccatagaccttattaaattttttaatttaaa 41872775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 46318582 - 46318521
Alignment:
Q  146 actttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||||| |||||||||||    
T  46318582 acttttagagtggtccaccatagatcctattaaatattttaatttaaatcgtttgatctttt 46318521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 52627530 - 52627579
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52627530 ggtccctcaaataatttcaagttttcattttggtcccacaattaataaaa 52627579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 14478401 - 14478525
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttatt-aaatggaggaccgttag 227  Q
    ||||||||||| |||| ||||||| | |||| ||||||||||||||||||||||| ||||||||| | |||||| |||| || ||| |||||  | ||      
T  14478401 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgattttttttttaaaaggagggtcattga 14478500  T
Q  228 atcacgtaggtgtattttatcttac 252  Q
    || ||| ||||||||||||||||||    
T  14478501 attacgcaggtgtattttatcttac 14478525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 5613034 - 5612943
Alignment:
Q  161 caccatagatcctattaattattttaatttaaatcctttga-tcttttattaaatggaggaccgttagatcacgtaggtgtattttatctta 251  Q
    ||||||||||||||||||||||||||||||||| | ||||| | | || ||||| ||| |||| |||||| ||||| |||||||||||||||    
T  5613034 caccatagatcctattaattattttaatttaaaccgtttgattatatttttaaaaggatgaccattagattacgtaagtgtattttatctta 5612943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 3617478 - 3617417
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    |||||||||||  |||||| ||||||||||| ||| ||||||||||||||||||||||||||    
T  3617478 atgtctatggtgaaccaaccttaagagtggtccactatagatcctattaattattttaattt 3617417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 15234131 - 15234046
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||| |||||||||||| |||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||||    
T  15234131 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatcc 15234046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 49802985 - 49802847
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| |||||||||||||||||   || |||| ||||||||  |||  |||| ||||||||||||||||  || ||||| ||     
T  49802985 taatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttctccgtttgccaaataaatcccgacggttaacttc 49802886  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggt 159  Q
    ||||| ||  |||||||||||  |||||| |||| ||||||    
T  49802885 aactctaa--atgtctatggtgtaccaaccttaaaagtggt 49802847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 15746781 - 15746673
Alignment:
Q  94 caaataaatcctc-acagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaa 192  Q
    |||||||||| || || |||||||||||||  ||  ||||||||||| ||||||  ||||||||||| |||||||||||||||||| | ||||||||| |    
T  15746781 caaataaatcatccactgttaagtttaacttcaa--atgtctatggtggaccaatcttaagagtggtccaccatagatcctattaa-tcttttaatttta 15746685  T
Q  193 atcctttgatct 204  Q
    | ||||||||||    
T  15746684 accctttgatct 15746673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 44999443 - 44999367
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctt 205  Q
    ||||||||||| ||||||   |||||||||| ||||||||||| ||||||||||||||| ||||| | |||||||||    
T  44999443 atgtctatggtggaccaatcgtaagagtggttcaccatagatcttattaattattttaacttaaaccatttgatctt 44999367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 50442640 - 50442734
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||||||||||||| | ||||| |||||| || |||||||||||||| |||| ||||| | |||||| ||| ||||  |||| ||||||||||    
T  50442640 gtccctcaaataattttatgtttttattttggtctcacaattaataaaacgtacattttgattcctcaccttttcctctgtttgtcaaataaatc 50442734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 46467172 - 46467353
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat-cctcacagttaagtt 117  Q
    ||||||||||||||||||||| ||||| || ||||||||   |  ||| |||||||||  ||| ||||| |||| ||||||||| |||| | ||||||||    
T  46467172 taatttcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgtttgtcaaataaatccctcgctgttaagtt 46467271  T
Q  118 taactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    ||||   ||  ||||||||||| ||||||| |||| |||| | |||| |||||  |||||| | |||||||||||| | ||||||    
T  46467272 taaccataa--atgtctatggtggaccaacattaaaagtgatccaccgtagatgttattaaat-ttttaatttaaaccgtttgat 46467353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 9482602 - 9482646
Alignment:
Q  141 gaccaactttaagagtggtacaccatagatcctattaattatttt 185  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  9482602 gaccaactttaagagtggttcaccatagatcttattaattatttt 9482646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 41874072 - 41873875
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||| ||||||| | ||||||| ||| || || ||||||||||| ||| ||||||| || | |  ||| ||||| ||| |||||||||||||      
T  41874072 ggtccctcaattaatttccatttttcatcttggtctcataattaataaaaagtatcttttggccctttagcttttcctccgtttaccaaataaatccttg 41873973  T
Q  108 ca-gttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
       ||||||||||||   ||  ||||||||||| ||||||| ||||||||||| |||||||||    ||||||| ||| ||||| || | ||||||||||    
T  41873972 gttgttaagtttaaccacaa--atgtctatggtggaccaaccttaagagtggtccaccatagacttcattaattttttaaattttaaccgtttgatcttt 41873875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 207
Target Start/End: Original strand, 46110337 - 46110494
Alignment:
Q  48 attaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaactcaaattatgtctatggtagaccaac 147  Q
    |||||||||| |||| |||||||| ||||  |||  |||| ||||| |||||||||   || ||||| |||||||| || |||  ||||||| |||||||    
T  46110337 attaataaaacgtactttttggtcactcaagtttttctccgtttgctaaataaatctcgactgttaactttaactctaaatat--ctatggtggaccaac 46110434  T
Q  148 tttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
     ||||||||||| || | |||| | |||||||| | ||||||| || | |||||||||||    
T  46110435 cttaagagtggtccatcgtagaccttattaattttgttaattttaaccgtttgatctttt 46110494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 13894752 - 13894826
Alignment:
Q  132 tctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||||||| ||||||| | |||||| ||  |||||||||||| ||||||||||||||||||| | |||||||||||    
T  13894752 tctatggt-gaccaacctaaagagttgtctaccatagatcctgttaattattttaatttaaaccgtttgatctttt 13894826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 12665945 - 12666003
Alignment:
Q  149 ttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||| ||||||||||| |||||||| | |||||||||| | |||||||||||    
T  12665945 ttaagagtggtccaccatagatcttattaattttgttaatttaaaccgtttgatctttt 12666003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 44276148 - 44276250
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||| | ||||||||||| || || ||||||||||| |||| ||||| ||| ||||||||  |||  |||| ||| |||||||| || |||||||||    
T  44276148 taatttccatttttcattttggtctcataattaataaaacgtacgttttgatccttcacttttttctctgtttgtcaattaaatcctgactgttaagttt 44276247  T
Q  119 aac 121  Q
    |||    
T  44276248 aac 44276250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 267
Target Start/End: Complemental strand, 6049406 - 6049267
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttg--atcttttattaaatggaggaccgtta 226  Q
    ||||||||||| ||||||  | || |||||| |||| |||||||| ||||||||||||||||||| |  |||  || ||||||||||  ||||||| |||    
T  6049406 atgtctatggtggaccaatctaaatagtggtccaccgtagatcctgttaattattttaatttaaaccgattgatattttttattaaa-agaggaccatta 6049308  T
Q  227 gatcacgtaggtgtattttatcttacattgaaccatcaaca 267  Q
    ||||| | | || || | ||||||||| ||||||| |||||    
T  6049307 gatcatgcatgtctactgtatcttacaatgaaccaacaaca 6049267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 10711926 - 10712046
Alignment:
Q  132 tctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttagatca 231  Q
    |||||| ||||||||| | ||||||||| || |||| || ||| ||||| |||||||||||| | || ||| || | |||||  ||| ||| |||||| |    
T  10711926 tctatgatagaccaacctaaagagtggtccatcataaattctactaatttttttaatttaaacctttagattttattttaaaatgagaaccattagatta 10712025  T
Q  232 cgtaggtgtattttatcttac 252  Q
    | ||||| |||||||||||||    
T  10712026 cataggtttattttatcttac 10712046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 10722354 - 10722234
Alignment:
Q  132 tctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttagatca 231  Q
    |||||| | ||||||| | ||||||||| || ||||||| ||| ||||| |||||||||||| | || ||| || | |||||  ||| ||| |||||| |    
T  10722354 tctatgatggaccaacctaaagagtggtccatcatagattctactaatttttttaatttaaacctttagattttattttaaaatgagaaccattagatta 10722255  T
Q  232 cgtaggtgtattttatcttac 252  Q
    | ||||| |||||||||||||    
T  10722254 cataggtttattttatcttac 10722234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 26286578 - 26286666
Alignment:
Q  161 caccatagatcctattaattattttaatttaaatcctttga-tcttttattaaatggaggaccgttagatcacgtaggtgtattttatc 248  Q
    |||||||||  |||||||||||||||||||||| | ||||| | | || ||||| ||| |||| |||||| ||||| ||||||||||||    
T  26286578 caccatagactctattaattattttaatttaaaccgtttgattatatttttaaaaggatgaccattagattacgtaagtgtattttatc 26286666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 18821720 - 18821642
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||| ||| ||| |||||||||||  |||| |||||||||||||| ||| || || || | |||||||||||    
T  18821720 atgtctatggtggactaaccttaagagtggtctaccaaagatcctattaattttttaaaatttaaccgtttgatctttt 18821642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 42244657 - 42244695
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaa 57  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  42244657 taatttcaaattttcattttgatcccataattaataaaa 42244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 51042443 - 51042350
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat 102  Q
    ||||||| || ||||||| | ||||||||||| |||||||||||||||||   || |||| |||||||  ||||  |||| ||||||||||||||    
T  51042443 ggtcccttaattaatttccaattttcattttggtcccacaattaataaaactcacgttttagtccctc-tttttttctccgtttgccaaataaat 51042350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 26802075 - 26802148
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    ||||||| |||  |||||| |||||||| || ||| ||||||| ||||||| ||||||||||||| | ||||||    
T  26802075 atgtctaaggtgaaccaaccttaagagttgtccactatagatcatattaatcattttaatttaaaccgtttgat 26802148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 34350228 - 34350288
Alignment:
Q  110 gttaagtttaactc-aaattatgtctatggtagaccaactttaagagtggtacaccataga 169  Q
    |||||||||||| | |||| ||||||||||| || |||| ||||||||||| |||||||||    
T  34350228 gttaagtttaaccccaaatgatgtctatggtggatcaaccttaagagtggtccaccataga 34350288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 39603870 - 39604054
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcaca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||| ||||| ||||||||||||||| | ||     
T  39603870 tccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttgccaaataaatcatgact 39603969  T
Q  110 gttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    ||||||||||| | ||||| ||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||||||||||    
T  39603970 gttaagtttaaccccaaatgatgtctatggtagaccaaccttaaaagtgatccaccatagatcctattaattattttaatttaaa 39604054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 22047747 - 22047947
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| || ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| |||| ||||| |||||||||||||||||      
T  22047747 ggtcccttaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccgtttgccaaataaatcctgg 22047846  T
Q  108 cagttaagtttaactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    | |||||||||||||| |||| ||||||||||| || |||| ||||||||||| ||||||| ||||||| ||||||||||||||||| | |||||| |||    
T  22047847 ctgttaagtttaactctaaatgatgtctatggtggatcaaccttaagagtggtccaccataaatcctatgaattattttaatttaaaccgtttgattttt 22047946  T
Q  207 t 207  Q
    |    
T  22047947 t 22047947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 202
Target Start/End: Complemental strand, 30859272 - 30859078
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcac 108  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||  ||||||||| ||| ||||  |||||||||||| || | ||    
T  30859272 gtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctgtttgccaaataagtcttgac 30859173  T
Q  109 agttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
     ||||||||||| | ||||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  30859172 cgttaagtttaaccccaaatgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgat 30859078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 27705413 - 27705218
Alignment:
Q  12 cctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagt 111  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||| |||| |||||||||||||  ||| ||||| |||||||||||||| |  |||||    
T  27705413 cctcaaataatttcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctccttttgccaaataaatacagacagt 27705314  T
Q  112 taagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||| |||||  ||||| ||||||||||| ||||||| |||| |||||| |||||||||||||||||||  |||||||||||| | |||||| ||||    
T  27705313 taactttaatccaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaatatttttaatttaaaccgtttgatatttt 27705218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 325286 - 325083
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||| ||||| ||||||||||||||||  |    
T  325286 ggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccgtttgccaaataaatcccga 325187  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    | ||||| |||||||| ||  ||||||||||| ||||||| |||| |||||| || | |||| | |||||||| | ||||||| || | |||||||||||    
T  325186 ctgttaactttaactctaa--atgtctatggtggaccaaccttaatagtggtccatcgtagaccttattaattttgttaattttaaccgtttgatctttt 325089  T
Q  208 attaaa 213  Q
     |||||    
T  325088 tttaaa 325083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 30910767 - 30910939
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| |||||||||||||||||    | |||| ||||||||| ||| ||||  ||| |||||||||||   || ||||| |||    
T  30910767 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctctgtttaccaaataaatctcgactgttaacttt 30910866  T
Q  119 aactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||| | |||| |||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  30910867 aacaccaaatgatgtctttggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattt 30910939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 1102753 - 1102831
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||||||    
T  1102753 atgtctatggtagaccaaccttaagagtggtccaccatagatcttattaattattttaatttaaaccgtttgatctttt 1102831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 8521270 - 8521463
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| || ||||||||||||||||||||| ||||| || ||||||||   |  |||||||||||||| |||  |||| |  | |||||||||||  |    
T  8521270 ggtcccttaattaatttcaagttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcccga 8521369  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    | ||||| |||||| | ||  |||| |||||| ||||||| |||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||    
T  8521370 cggttaactttaaccccaa--atgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaatta-tttaatttcaaccctttgatct 8521463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 22049229 - 22049124
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||||| ||||  |||| |||||||||||   | ||||||    
T  22049229 aaataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctgtttggcaaataaatccctgctgttaag 22049130  T
Q  116 tttaac 121  Q
    ||||||    
T  22049129 tttaac 22049124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 39605559 - 39605464
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaa 114  Q
    ||||||||||||||||||||| |||||||||||||||||  ||| |||||||||||||  ||| ||||| ||||||||||||||||| || |||||    
T  39605559 taatttcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgccaaataaatcctgacggttaa 39605464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 1010465 - 1010272
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| || |||||||||||||| |||||| ||||| || ||||||||   |  |||||||||||||| |||  |||| |  | |||||||||||  |    
T  1010465 ggtcccttaattaatttcaagtttttattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcccga 1010366  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    | ||||| |||||| | ||  |||| |||||| ||||||| ||||||||||| | ||||||||||||||||||| |||||||| || ||||||||||    
T  1010365 cggttaactttaaccccaa--atgtgtatggtggaccaaccttaagagtggtccgccatagatcctattaatta-tttaatttcaaccctttgatct 1010272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 15548263 - 15548456
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    |||||||||||| ||||  |||| |||||| ||||||||||||  ||  ||| |||||||| |||||| ||| |||||||||||||||||  | ||||||    
T  15548263 aaataatttcaaatttt--tttttatcccataattaataaaattcactatttagtccctcatttttcc-tccgtttgccaaataaatcctgcctgttaag 15548359  T
Q  116 tttaactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcct----attaattattttaatttaaatcctttgatctttt 207  Q
    |||||| | |||| |||||| |||| ||||||| |||||| || | ||||||| |||||    |||||||||||||||||||| | |||||| ||||    
T  15548360 tttaaccctaaatgatgtctctggtggaccaaccttaagaatgatccaccataaatcctattaattaattattttaatttaaaccatttgatttttt 15548456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 30912252 - 30912084
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| |||||||||||||||||    | |||| ||||||||| |||  |||| ||||||||||||||||  |  ||||| |||    
T  30912252 taatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccctcacctttttctccgtttgccaaataaatcccaagtgttaacttt 30912153  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatt 189  Q
    ||||| ||  || |||||||| ||||||| |||| ||||||||| |||||| | |||||||| | ||||||    
T  30912152 aactccaa--atatctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgttaatt 30912084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 11262532 - 11262606
Alignment:
Q  133 ctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||||||    
T  11262532 ctatggtggaccaaccttaagagtggtccaccatagatcctattaattattataatttaaaccatttgatctttt 11262606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 30857826 - 30857964
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||| |||||||||||||| ||||||||||||||||| |||  ||||||||| |||  ||| ||||| |||| |||||||||| | |||||||| |||    
T  30857826 taattttaagttttcattttggtcccacaattaataaaacgtatgttttggtccttcagattttcctccttttgtcaaataaatcttaacagttaacttt 30857925  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggt 159  Q
    ||||  ||  ||||||||| | ||||||| |||| ||||||    
T  30857926 aactttaa--atgtctatgatggaccaaccttaaaagtggt 30857964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 15941297 - 15941385
Alignment:
Q  17 aataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    |||||||| |||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||| | ||| |||| ||||||| ||||    
T  15941297 aataattttaagttttcattttgattccataattaataaaacgtaccatttggtccctcactttttcttccgtttgtcaaataagtcct 15941385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 33174050 - 33173901
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcacagttaagtt 117  Q
    |||||||| |||||||||||||||||||| |||||||||    | |||| ||||||||| ||| ||||  |||||||||||||||| |  | ||||||||    
T  33174050 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatccttggctgttaagtt 33173951  T
Q  118 taactcaaattatgtctatggtagaccaactttaagagtggtacaccataga 169  Q
    |||| | ||  ||||||||||| ||||||| |||||||||||  ||||||||    
T  33173950 taaccccaa--atgtctatggtggaccaaccttaagagtggtctaccataga 33173901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 22308892 - 22308705
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcacagttaa 114  Q
    ||||||||||| |||||||||||| ||||| |||||||||||    | |||| ||||||||| |||  |||| |||||||||||||||| |    |||||    
T  22308892 aaataatttcatgttttcattttggtcccataattaataaaacaggcgttttagtccctcacattttgctccgtttgccaaataaatccatggttgttaa 22308793  T
Q  115 gtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    ||||||| | ||  ||||||||||| |||| || ||||||||||| |||||||||   |||||| | ||||||| |||| | ||||||||    
T  22308792 gtttaaccccaa--atgtctatggtggacctaccttaagagtggtccaccatagacattattaaattttttaatgtaaaccatttgatct 22308705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 1009325 - 1009396
Alignment:
Q  134 tatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||    
T  1009325 tatggtggaccaaccttaagagtggtccaccatagatcctattaatta-tttaatctcaatcctttgatcttt 1009396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 13520764 - 13520716
Alignment:
Q  145 aactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||||    
T  13520764 aactttaagagtggttcaccatagatcctattaattaatttgatttaaa 13520716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 24503199 - 24503295
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||| || ||||| | | ||||||||||| ||||| || |||||||| |||||||||||||||| | ||||| |||  ||||||||| ||||||    
T  24503199 ggtcccttaattaattaccaattttcattttggtcccataagtaataaaacgtaccttttggtcccttagttttctctctgtttgccaaaaaaatcc 24503295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 24509137 - 24509041
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||| || ||||| | | ||||||||||| ||||| || |||||||| |||||||||||||||| | ||||| |||  ||||||||| ||||||    
T  24509137 ggtcccttaattaattaccaattttcattttggtcccataagtaataaaacgtaccttttggtcccttagttttctctctgtttgccaaaaaaatcc 24509041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 34894164 - 34894260
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||| || ||||||| | ||||||||||| ||||  || |||||||| |||||||||||||||| | ||||  |||| ||||||||| ||||||    
T  34894164 ggtcccttaattaatttccatttttcattttggtcccgtaagtaataaaaagtaccttttggtcccttagttttgtctccgtttgccaaaaaaatcc 34894260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 41798048 - 41798004
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaa 52  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||    
T  41798048 ggtccctcaaataatttcaagtttttattttggtcccacaattaa 41798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 4127234 - 4127161
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    ||||||||| |||| |||  |||| |||||| ||||||||||||| ||||||| ||||||||||| | ||||||    
T  4127234 atgtctatgatagatcaatcttaaaagtggtccaccatagatcctgttaattaatttaatttaaaccatttgat 4127161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 10735901 - 10735962
Alignment:
Q  132 tctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    |||||||| ||||||| |||| ||  || ||||||||||| |||||||||||||||||||||    
T  10735901 tctatggtggaccaacgttaacagcagtccaccatagatcatattaattattttaatttaaa 10735962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 32757840 - 32757889
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    |||||||||||||||||| ||||||||||||| ||||| || ||||||||    
T  32757840 ggtccctcaaataatttccagttttcattttggtcccataaataataaaa 32757889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 9220441 - 9220365
Alignment:
Q  129 atgtctatggtagaccaactttaaga---gtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    ||||||||||| ||||||| ||||||   ||||| | ||||| ||| ||||||||||||||||||||| | ||||||    
T  9220441 atgtctatggtggaccaacattaagaagagtggtcccccataaatcttattaattattttaatttaaaccgtttgat 9220365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 11262279 - 11262320
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    ||||||||| |||||||||||||  |||||||||||||||||    
T  11262279 aaataattttaagttttcattttagtcccacaattaataaaa 11262320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 34899052 - 34898963
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaa 97  Q
    ||||||| || ||||||  | ||||||||||| ||||| || |||||||| |||| ||||||||||| | ||||  |||| |||||||||    
T  34899052 ggtcccttaattaattttcatttttcattttggtcccataagtaataaaaagtacattttggtcccttagttttgtctccgtttgccaaa 34898963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 36898957 - 36898884
Alignment:
Q  134 tatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||||| | ||||| |||| ||| || |||||||||| || |||||||||||| |||||| |||||||| ||||    
T  36898957 tatggtggcccaaccttaaaagtagtccaccatagattctgttaattattttagtttaaaccctttgatttttt 36898884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 36
Target Start/End: Complemental strand, 15941437 - 15941409
Alignment:
Q  8 ggtccctcaaataatttcaagttttcatt 36  Q
    |||||||||||||||||||||||||||||    
T  15941437 ggtccctcaaataatttcaagttttcatt 15941409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 8 - 203
Target Start/End: Complemental strand, 125334 - 125137
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |    
T  125334 ggtccctcaaataatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcctaa 125235  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctatt-aattattttaatttaaatcctttgatc 203  Q
    | ||||||||||| | ||||| |||| |||| | ||||||| |||| |||||| ||||||||| | |||| |||| |||||||||||| |||||||||    
T  125234 cggttaagtttaaccccaaatgatgtatatgatggaccaaccttaaaagtggtccaccatagaccttattaaatttttttaatttaaaccctttgatc 125137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 123984 - 124177
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||  ||||||||||||||||| |    
T  123984 ggtccttcaaataatttcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcctctgtttgccaaataaatcctta 124083  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    | |||||||||||| | ||  || |||||||| ||||||| ||||||||||| ||||||||||| |||||| | | |||||||||||| ||||||||    
T  124084 cggttaagtttaaccccaa--atatctatggtggaccaaccttaagagtggtccaccatagatcgtattaaat-tgttaatttaaatcgtttgatct 124177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 3e-52; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 1794426 - 1794622
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| ||||  |||| |||||||||||| |    
T  1794426 ggtccctcaaataatttcaagttttcattttgatctcacaattaataaaatataccttttgatccctcactttttcctctgtttgtcaaataaatcctaa 1794525  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatc 203  Q
    | ||||||||||| | ||||| |||| |||||| ||||||| ||||||||||| ||||||||| | |||||| | |||||||||||| | |||||||    
T  1794526 cggttaagtttaatcccaaatgatgtatatggtggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatc 1794622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 27851033 - 27850845
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||||| |||| ||||| |       ||||||||  |    
T  27851033 ggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgt-------ataaatcccaa 27850941  T
Q  108 cagttaagtttaac-tcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    |||||||||||||| |||||| ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  27850940 cagttaagtttaacctcaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattattttaatttaaaccgtttgat 27850845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 2312583 - 2312397
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| | |||||||||||||| ||||||  ||||||||||||||||| |||| |||  ||||||||||||| ||||| ||||||||||||||| | |    
T  2312583 ggtcccttagataatttcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgtttgccaaataaatcatga 2312484  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    | ||||||||||| | ||||| ||||||||||| ||||||  |||| |||||| |||||||||||||||||||||||||||||||||    
T  2312483 ccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaatttaaa 2312397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 6348170 - 6348372
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||  |||| ||||||||| || |    
T  6348170 ggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctctgtttgtcaaataaattctga 6348269  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
      ||||||||||| |||||   ||||||||||| ||||||| ||||||||||| |||| |||| | |||||||  || |||||| || ||||||||||||    
T  6348270 tggttaagtttaacctcaa---atgtctatggtggaccaaccttaagagtggtccaccgtagaccttattaatatttctaattttaaccctttgatcttt 6348366  T
Q  207 tattaa 212  Q
    | ||||    
T  6348367 ttttaa 6348372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 52239892 - 52240091
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||| | |||  |||  |||| |||||||||||||| |  |    
T  52239892 ggtccctcaaataatttcaaatttttattttgatcccacaattaataaaacgtacgttttggttcttcaggtttttctccgtttgccaaataaattccaa 52239991  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
      ||||| |||||| ||||| ||||||||||| ||||||| ||||||||||| |||||||||||||||||||  |||||||||||| | |||||| ||||    
T  52239992 gggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaaccgtttgatttttt 52240091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 7707614 - 7707864
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||| |||||||||||||||||   || |||| |||| |||| ||| ||||  ||||||||||||||||| || ||||  |||    
T  7707614 taatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctctgtttgccaaataaatcctgacggttagcttt 7707713  T
Q  119 aactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatgga 217  Q
    ||| | |||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| || | |||||| |||| || ||  ||    
T  7707714 aacaccaaatgatgtctttggtagaccaaccttaagagtggtccaccatagatcctattaattattttaatttcaaccgtttgattttttctttaaaaga 7707813  T
Q  218 ggaccgttagatcacgtaggtgtattttatcttacattgaaccatcaacac 268  Q
    | ||| || ||| | | |||| |||||||||||||  || |||||||||||    
T  7707814 gaaccattggattaggcaggtctattttatcttacgatgtaccatcaacac 7707864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 129 - 271
Target Start/End: Original strand, 56085482 - 56085624
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    ||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||| |||| ||||| ||| ||||||| ||    
T  56085482 atgtctatggtggactaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatttttttttaaaaggatgaccgttgga 56085581  T
Q  229 tcacgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
    ||||  | ||||||||||||||||| |||||||||||||||||    
T  56085582 tcacacatgtgtattttatcttacagtgaaccatcaacactta 56085624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 6349654 - 6349407
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| | ||| ||| ||||||| ||||  |    
T  6349654 ggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaccttttcttccgtttaccaaatagatcccga 6349555  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctat---taattattttaatttaaatcctttgatc 203  Q
      ||||||||||| | ||||| |||| |||||| || |||| ||||||||||| ||||||||| | |||   ||  ||||||||||||||   |||||||    
T  6349554 acgttaagtttaaccccaaatgatgtatatggtggatcaaccttaagagtggtccaccatagaccatatatatatatattttaatttaaactgtttgatc 6349455  T
Q  204 ttttattaaatggaggaccgttagatcacgtaggtgtattttatctta 251  Q
    |||| ||  |  ||||| |||| ||| ||| | |||||||||||||||    
T  6349454 tttttttctaaagaggatcgttggattacgcaagtgtattttatctta 6349407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 11968530 - 11968711
Alignment:
Q  12 cctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagt 111  Q
    |||||||||||||||||||||||||||| || ||||||||||||||  ||| |||||||||||||  |||  |||| ||||  |||||||| |   | ||    
T  11968530 cctcaaataatttcaagttttcattttggtctcacaattaataaaacatactttttggtccctcagattttgctccgtttgtaaaataaattccggctgt 11968629  T
Q  112 taagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
     || ||||||||| |||||||||||| | ||||||| ||||||||||| || ||||||||||||||||||||||||||||||    
T  11968630 caactttaactcagattatgtctatgatggaccaaccttaagagtggtccatcatagatcctattaattattttaatttaaa 11968711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 8 - 257
Target Start/End: Original strand, 1829768 - 1830013
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||||| ||| | |||| ||||||||| |  |    
T  1829768 ggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttagtccctcactttttcctacgtttgtcaaataaattccga 1829867  T
Q  108 cagttaa-gtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    | |||||  |||||||| ||  |||||||| || |||||||||||| |||||| || | |||| | |||||||| | ||||| | || | |||||  |||    
T  1829868 ctgttaacttttaactctaa--atgtctatcgtggaccaactttaaaagtggtccatcgtagaccttattaattttattaatcttaaccatttga--ttt 1829963  T
Q  207 tattaaatggaggaccgttagatcacgtaggtgtattttatcttacattga 257  Q
    | ||||| |||||||| |||||| |||||||| ||||||||||||| ||||    
T  1829964 ttttaaa-ggaggaccattagattacgtaggtctattttatcttacgttga 1830013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 23201872 - 23202043
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| ||||| |||||| ||||||| |||||||||    | |||||||||||||| ||| ||||| ||||||||||||||||  || |||||||||    
T  23201872 taatttcatgtttttattttggtcccacatttaataaaaatggcattttggtccctcaccttttcctccgtttgccaaataaatcccaaccgttaagttt 23201971  T
Q  119 aactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaattt 190  Q
    ||   |||| |||| |||||| || || |||||||||||||||||||||| |||||||||||||||||||||    
T  23201972 aataaaaatgatgtttatggtggatcatctttaagagtggtacaccataggtcctattaattattttaattt 23202043  T

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Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 42871121 - 42871222
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||| || |||||||||    
T  42871121 taatttcaaattttcattttgatcccacaattaataaaacgtacgttttggtccctcactttttcctccgtttgccaaataaatcctgactgttaagttt 42871220  T
Q  119 aa 120  Q
    ||    
T  42871221 aa 42871222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 1188859 - 1188954
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||    
T  1188859 gtccctcaaataatttcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcactttttcctccgtttgccaaataaatcc 1188954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 37882849 - 37882944
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||||||||||||    
T  37882849 ggtccctcaaataatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgtttgccaaataaatc 37882944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 15450176 - 15449991
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||| ||||||||||| ||||||||| |||||||  | ||||||||| |||| |||  ||| || || ||| ||||| ||||||||||||||| | |    
T  15450176 ggtcccttaaataatttcaggttttcattatgatcccttagttaataaaacgtacgtttaagtcgcttaccttttcctccgtttgccaaataaatctt-a 15450078  T
Q  108 cagttaagtttaactc-aaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    | |||||||||||||| ||||  ||||||| || ||||||| ||||||||||| |||||||||||||||||||  ||||||||||||    
T  15450077 cggttaagtttaactccaaatgttgtctatcgtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaa 15449991  T

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Target: chr4; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 24426354 - 24426448
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat 102  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||||    
T  24426354 ggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaaaaaat 24426448  T

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Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 1588190 - 1588045
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||   |||||||||||| ||||| ||| ||||||||||  | |    
T  1588190 ggtccctcaaataattttaagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctccgtttaccaaataaattatga 1588091  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaa 152  Q
    | ||||||||||| | ||||| ||||||||||||||||||| ||||    
T  1588090 ctgttaagtttaaccccaaatgatgtctatggtagaccaaccttaa 1588045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 393739 - 393643
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||||||||||  |||| ||||||||||||||||    
T  393739 ggtccctcaaataatttcaaattttcattttggtcccacaattaataaaaagtatcttttggtccctcacttttttctccgtttgccaaataaatcc 393643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 4129012 - 4129104
Alignment:
Q  12 cctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  4129012 cctcaaataatttcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgtttgccaaataaatcc 4129104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 1587197 - 1587345
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||||||| || ||||||||||  || |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||  |    
T  1587197 ggtccctcaaataattttaaattttcattttagtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcccga 1587296  T
Q  108 cagttaa-gtttaactcaaattatgtctatggtagaccaactttaagagtg 157  Q
      |||||  |||||||| ||  |||||||| ||||||||||||||| ||||    
T  1587297 tggttaacttttaactctaa--atgtctatagtagaccaactttaaaagtg 1587345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 129 - 271
Target Start/End: Complemental strand, 19750275 - 19750132
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatc-ttttattaaatggaggaccgttag 227  Q
    ||||||||||| ||| ||  |||| ||| || ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||  ||| |    
T  19750275 atgtctatggtggacaaatcttaaaagttgtccaccatagatcctattaattattttaatttaaatcgtttgatcttttttttaaaaggaggattgttgg 19750176  T
Q  228 atcacgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
    |||||| ||||||||| ||||||||  |||||||||||||||||    
T  19750175 atcacgcaggtgtattctatcttacgatgaaccatcaacactta 19750132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 129 - 271
Target Start/End: Original strand, 19789531 - 19789674
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatc-ttttattaaatggaggaccgttag 227  Q
    ||||||||||| ||| ||  |||| ||| || ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||  ||| |    
T  19789531 atgtctatggtggacaaatcttaaaagttgtccaccatagatcctattaattattttaatttaaatcgtttgatcttttttttaaaaggaggattgttgg 19789630  T
Q  228 atcacgtaggtgtattttatcttacattgaaccatcaacactta 271  Q
    |||||| ||||||||| ||||||||  |||||||||||||||||    
T  19789631 atcacgcaggtgtattctatcttacgatgaaccatcaacactta 19789674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 390240 - 390345
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||||| || | ||||| ||||||||||||||||| || ||||||    
T  390240 aaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgtttgccaaataaatcctgactgttaag 390339  T
Q  116 tttaac 121  Q
    ||||||    
T  390340 tttaac 390345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 37884378 - 37884265
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||||||| || ||||||||||  ||||| |||||||||||||||||||||||||| | |||||| ||||| ||||||||||||||||  |    
T  37884378 ggtccctcaaataattttaaattttcatttttgtcccataattaataaaatgtaccttttggtcctttactttttcctccgtttgccaaataaatccaga 37884279  T
Q  108 cagttaagtttaac 121  Q
    | ||||||||||||    
T  37884278 ctgttaagtttaac 37884265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 42810303 - 42810120
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcac 108  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| |||  ||||||||| ||| ||||| |||||||||||||||||       
T  42810303 gtcccttaaataatttcaacttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttgccaaataaatccttgg 42810204  T
Q  109 agttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
     |||||||||||| |  |  |||||||||||  |||||  |||||||| || ||||||||| | |||||| | ||||||||||||    
T  42810203 tgttaagtttaaccccca-gatgtctatggtgaaccaatcttaagagtagtccaccatagaccttattaaattttttaatttaaa 42810120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 2310949 - 2311052
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||  ||| |||||  |||||||||||||||| |||||||| |||    
T  2310949 taatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctccgattgccaaataaatcctaacagttaacttt 2311048  T
Q  119 aact 122  Q
    ||||    
T  2311049 aact 2311052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 1831364 - 1831268
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||| |||| ||||||||||||| |||| |||||||||  |||||||||||    
T  1831364 ggtccctcaattaatttcaagttttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccatttttcaaataaatcc 1831268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 27847697 - 27847806
Alignment:
Q  12 cctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagt 111  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||  ||| ||||||| | |||| | ||| ||||||||||||||||  || ||    
T  27847697 cctcaaataatttcaagtttttattttggtcccacaattaataaaatgtatttttcggtcccttaatttttcttccgtttgccaaataaatccagacggt 27847796  T
Q  112 taagtttaac 121  Q
    ||||||||||    
T  27847797 taagtttaac 27847806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 49342643 - 49342728
Alignment:
Q  17 aataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||  ||||||||    
T  49342643 aataattttaagttttcattttgatcccacaattaataaaatgtacgtttaagtccctcactttttcctccatttgttaaataaat 49342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 26629945 - 26630048
Alignment:
Q  149 ttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttagatcacgtaggtgtattttatc 248  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||   ||||||||||| || || ||| |||| |||||| ||||||||||||||||||    
T  26629945 ttaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatcttttttttaaaggatgaccattagattacgtaggtgtattttatc 26630044  T
Q  249 ttac 252  Q
    ||||    
T  26630045 ttac 26630048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 44503778 - 44503684
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||||||||||||||||||| |||||| || |||||||||| ||| |||| |||||||||||||||||| ||||  ||||||||||||||||    
T  44503778 gtccctcaaataatttcaagtttttattttggtctcacaattaat-aaacgtacattttggtccctcactttttcctctgtttgccaaataaatcc 44503684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 31965861 - 31965947
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    |||||||||||||| ||| || ||| |||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  31965861 taatttcaagtttttattctggtcctacaattaagaaaatgtacattttggtccctcactttttcctccgtttgccaaataaatcct 31965947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 42872379 - 42872303
Alignment:
Q  29 ttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||| |||||||||||| ||||    
T  42872379 ttttcattttggtcccataattaataaaatgtacgttttggtccctcactttttcctccgtttgccaaataattcct 42872303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 44501533 - 44501628
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||||||| |||| |||  |||||||||||||  |||  |||||||||||||||    
T  44501533 ggtccctcaaataatttcaagttttcattctggtcccataattaataaaacgtacgtttaagtccctcacttttttctctgtttgccaaataaatc 44501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 52138771 - 52138696
Alignment:
Q  132 tctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| | |||||| ||||    
T  52138771 tctatggtagaccaactttaagaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttt 52138696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 53432079 - 53432275
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaat-cctcac 108  Q
    ||||| || ||||||||||||||||||||| ||||| || ||||||||  ||  |||||||||||||  ||| ||| | || | ||||||||| ||| ||    
T  53432079 tcccttaattaatttcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcgttggtcaaataaatccctgac 53432178  T
Q  109 agttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
     |||||||||||| | ||  |||||||||||  |||||||||||||||||  ||||||| | | |||||||| ||| ||||| || | |||||||||||    
T  53432179 ggttaagtttaaccccaa--atgtctatggtgaaccaactttaagagtggctcaccatacaccttattaattttttcaattttaaccgtttgatctttt 53432275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 1190293 - 1190197
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||| |||  || ||||||||||  |||  ||||||||||||||||    
T  1190293 ggtccctcaaataattttaagttttcattttggtcccataattaataaaacgtacgtttaagtacctcacttttttctctgtttgccaaataaatcc 1190197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 1519946 - 1520069
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttga-tcttttattaaatggaggaccgttag 227  Q
    |||| ||||||||| || |||||| |||| | ||||||||||||||||||||||||||||||||| | ||||| | | || ||||| ||| |||| ||||    
T  1519946 atgtttatggtagatcacctttaa-agtgatccaccatagatcctattaattattttaatttaaaccgtttgattatatttttaaaaggatgaccattag 1520044  T
Q  228 atcacgtaggtgtattttatcttac 252  Q
    || ||||| ||||||||||||||||    
T  1520045 attacgtaagtgtattttatcttac 1520069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 13165522 - 13165708
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctc-acagttaagtt 117  Q
    |||||||| |||||||||||| ||||  |||||||||||    | |||| |||| |||  ||| ||||| |||| ||||||||||||  || ||||||||    
T  13165522 taatttcatgttttcattttggtccct-aattaataaaaatggcgttttcgtccttcatcttttcctccgtttgtcaaataaatccttgactgttaagtt 13165620  T
Q  118 taact-caaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||| ||||||   |||||||| ||||||| ||||||||||| |||||||||    |||||||||||||||||||| | |||||||||||    
T  13165621 taacttcaaatt---tctatggtggaccaaccttaagagtggtccaccatagacttcattaattattttaatttaaaccgtttgatctttt 13165708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 36845545 - 36845668
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatggaggaccgttaga 228  Q
    |||| |||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||   |||||| |||| || ||  || |||| || ||    
T  36845545 atgtttatgatagaccaacattaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatattttttttaaaagatgaccattgga 36845644  T
Q  229 tcacgtaggtgtattttatcttac 252  Q
    | ||| ||||||||||||||||||    
T  36845645 ttacgcaggtgtattttatcttac 36845668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 207
Target Start/End: Complemental strand, 53435852 - 53435656
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctc-ac 108  Q
    ||||| || ||||||||||||||||||||| ||||| || ||||||||   |  |||||| ||||||  ||| ||||| || | ||||||||||||  ||    
T  53435852 tcccttaattaatttcaagttttcattttggtcccataagtaataaaactcatgttttggcccctcaagtttacctccgttggtcaaataaatccttgac 53435753  T
Q  109 agttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
     |||||||||||||  ||  ||||||||||||||||||| ||||||||||| |||| ||||    ||||||| ||| ||||| || | |||||||||||    
T  53435752 ggttaagtttaactttaa--atgtctatggtagaccaaccttaagagtggtccaccgtagacttcattaattttttaaattttaaccgtttgatctttt 53435656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 31968482 - 31968396
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcct 105  Q
    |||||| || ||||||||||| ||| ||||||||||||| |||| ||||||||| |||||||| ||||  |||||||||||||||||    
T  31968482 taattttaatttttcattttggtcctacaattaataaaacgtacgttttggtccttcactttttcctctgtttgccaaataaatcct 31968396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 252
Target Start/End: Original strand, 40723329 - 40723483
Alignment:
Q  94 caaataaatcctcacagttaagtttaac-tcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaa 192  Q
    |||||||||||  || |||||||||||| ||||||   || |||||| ||||||| |||||||||||  ||||||||||||||||||||||| ||| | |    
T  40723329 caaataaatccatactgttaagtttaacctcaaat---gtatatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatgtta 40723425  T
Q  193 atcctttgatcttttattaaatggaggaccgttagatcacgtaggtgtattttatcttac 252  Q
    ||| ||||||||||| || |   ||||||| || ||| |||  |||||||||||||||||    
T  40723426 atcgtttgatctttttttta--cgaggaccattggattacgctggtgtattttatcttac 40723483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 44498596 - 44498674
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||| ||||    
T  44498596 atgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatttttt 44498674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 52963592 - 52963743
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaag 115  Q
    |||||||||||||||||||||||| || |||||||||||||  |||  |||||||||||||  |||  |||| |||| ||||||||||   || |||||     
T  52963592 aaataatttcaagttttcattttggtctcacaattaataaatcgtatgttttggtccctcaagtttttctccgtttgtcaaataaatctcgactgttaac 52963691  T
Q  116 tttaactcaaattatgtctatggtagaccaactttaagagtggtacaccataga 169  Q
    |||||||| ||  ||||||||||| ||||| | |||| |||||| || ||||||    
T  52963692 tttaactccaa--atgtctatggtggaccagccttaaaagtggtccatcataga 52963743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 40792777 - 40792862
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||| |||||||||||||| |||||||||||||||||  ||| |||||||||||||  |||  |||| ||||||||||||||||    
T  40792777 taattttaagttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgtttgccaaataaatcc 40792862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 4871629 - 4871693
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    ||||||||||| ||||||| | ||||||||| |||| ||||||||||||||||||||||||||||    
T  4871629 atgtctatggtggaccaacctaaagagtggtccaccgtagatcctattaattattttaatttaaa 4871693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 26496290 - 26496206
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaa 213  Q
    ||||||||||| |||| ||||||| | |||| ||||||||||||||||||||||| ||||||||| | |||||| |||| |||||    
T  26496290 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatatttttttaaa 26496206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 52241245 - 52241141
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||| |||||||||||||| ||||||||||||||| |||| ||||| | |||||  ||| ||||| |||||||||||||| |  || ||||| |||    
T  52241245 taatttcatgttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgtttgccaaataaattccgaccgttaacttt 52241146  T
Q  119 aactc 123  Q
    |||||    
T  52241145 aactc 52241141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 10168873 - 10168770
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcacagttaagtt 117  Q
    |||||||| |||||||||||| |||||||||||||||||    | |||| ||||||||| ||| ||||| |||||||||||||||| | |||||||| ||    
T  10168873 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatccatgacagttaactt 10168774  T
Q  118 taac 121  Q
    ||||    
T  10168773 taac 10168770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 53205583 - 53205488
Alignment:
Q  9 gtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||| ||||||||||||  ||||||||||  |||||||||||| |||||   | |||| ||||||||||||| ||||| ||||||||||||||||    
T  53205583 gtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctccgtttgccaaataaatcc 53205488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 54485638 - 54485551
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||||||||||||||||||||||||||| |||||||||||  | | ||||| |||||||  ||| | ||| |||||||||||||||    
T  54485638 aaataatttcaagttttcattttgatcccataattaataaaacattcgttttgatccctcaagttttcatccgtttgccaaataaatc 54485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 7053332 - 7053390
Alignment:
Q  149 ttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||    
T  7053332 ttaagagtgatccaccatagatcctattaatttttttaatttaaatcgtttgatctttt 7053390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 11438659 - 11438476
Alignment:
Q  18 ataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc-ctcacagttaagt 116  Q
    ||||||| ||||||| |||||| || || |||||||||||    | |||||||||||||||||| ||||||||||| ||||||||| || ||  ||||||    
T  11438659 ataatttgaagtttttattttggtctcataattaataaaacactcgttttggtccctcactttttcctccatttgctaaataaatctctgacttttaagt 11438560  T
Q  117 ttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    ||||| | ||  ||||||| ||| |||||||  |    ||||| ||||||| | ||||||||||  ||||||||||| | ||||||    
T  11438559 ttaaccccaa--atgtctacggtggaccaacagtgtaggtggtccaccataaaccctattaatttctttaatttaaaccatttgat 11438476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 28590872 - 28590807
Alignment:
Q  142 accaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    |||||||||||||||| | || ||||||||||||||||||||||||| ||||   |||||||||||    
T  28590872 accaactttaagagtgattcatcatagatcctattaattattttaatataaactgtttgatctttt 28590807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 34326868 - 34326933
Alignment:
Q  135 atggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttg 200  Q
    ||||| |||||||||||||||||||  || |||||||||||||||||||| ||||| |||| ||||    
T  34326868 atggtggaccaactttaagagtggtctactatagatcctattaattatttaaattttaatcgtttg 34326933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 50548310 - 50548205
Alignment:
Q  22 tttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaac 121  Q
    ||||| |||||||||||| ||||||||||||||| |   || |||| ||||||||| ||| ||||  |||||||||||||||||  | || || ||||||    
T  50548310 tttcatgttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctgtttgccaaataaatcctttccgtcaactttaac 50548211  T
Q  122 tcaaat 127  Q
    ||||||    
T  50548210 tcaaat 50548205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 7708869 - 7708710
Alignment:
Q  28 gttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaactcaaat 127  Q
    |||||||||||| | | |||||||||||||    | |||| ||||||||| |||  |||  ||||||||||||||||  |  ||||| |||||||| ||     
T  7708869 gttttcattttggttctacaattaataaaagtggcgttttagtccctcacctttttctctgtttgccaaataaatcccaagtgttaactttaactctaa- 7708771  T
Q  128 tatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatt 189  Q
     || |||||||| ||||||| |||| ||||||||| |||||| | |||||||| | ||||||    
T  7708770 -atatctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgttaatt 7708710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 33232777 - 33232679
Alignment:
Q  29 ttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtttaactcaaat 127  Q
    |||| |||||| |||||||||||||||||    | |||| ||||||||| ||| ||||| ||||||||||||||| |  | ||||| ||||||||||||    
T  33232777 tttttattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatcttttccgttaactttaactcaaat 33232679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 49896561 - 49896487
Alignment:
Q  133 ctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatctttt 207  Q
    ||||||| ||||||| | ||||||||| |||  |||||||| ||||||||||||||||||| | |||||| ||||    
T  49896561 ctatggtggaccaacctaaagagtggtccactgtagatcctgttaattattttaatttaaaccgtttgatatttt 49896487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 53204378 - 53204472
Alignment:
Q  10 tccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||| ||||||||| | ||||||||||||||| ||||||||||||||    | |||| || ||||| ||||  |||| ||||||||||||||||    
T  53204378 tcccttaaataatttaatgttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgccaaataaatcc 53204472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 10167451 - 10167536
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    |||||||| |||||||||||| | |||||||||||||||  | | |||| ||||||||  ||| ||||| |||| |||||||||||    
T  10167451 taatttcatgttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctccgtttgtcaaataaatcc 10167536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 49344103 - 49344015
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccc-tcacttttccctccatttgccaaataaatc 103  Q
    ||||||||| ||| ||| |||||| ||||||||||||||||| ||   |||  ||||| |||||||| ||||| |||||||||||||||    
T  49344103 aaataattttaagcttttattttggtcccacaattaataaaacgtgggtttaagtcccttcactttttcctccgtttgccaaataaatc 49344015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 14524941 - 14524838
Alignment:
Q  19 taatttcaagtttt-cattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagtt 117  Q
    |||||||||||||| ||||||||||||| |||||||||||   |  |||| ||| || |||||||||||| ||||| ||| ||  ||| || ||||||||    
T  14524941 taatttcaagtttttcattttgatcccataattaataaaactcatgttttagtctcttacttttccctccgtttgcaaaaaaatccctaactgttaagtt 14524842  T
Q  118 taac 121  Q
    ||||    
T  14524841 taac 14524838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 169
Target Start/End: Complemental strand, 13166809 - 13166710
Alignment:
Q  69 gtccctcacttttccctccatttgccaaataaatcc-tcacagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccata 167  Q
    ||||||||||||| | ||| |||||||||||||||| | || |||||||||||||  ||  ||||||||| | |||||||  |||||||| | |||||||    
T  13166809 gtccctcactttttcatccgtttgccaaataaatccttgactgttaagtttaacttcaa--atgtctatgatggaccaaccgtaagagtgatccaccata 13166712  T

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Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 23103962 - 23103913
Alignment:
Q  156 tggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    |||| |||||||||||||||||||| |||||||||||| | ||||||||||    
T  23103962 tggtccaccatagatcctattaatt-ttttaatttaaaccgtttgatcttt 23103913  T

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Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 45535207 - 45535260
Alignment:
Q  156 tggtacaccatagatcctattaattattttaatttaaatcctttgatcttttatt 210  Q
    |||| |||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  45535207 tggtccaccatagatcctattaatt-ttttaatttaaactgtttgatcttttatt 45535260  T

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Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 56157457 - 56157396
Alignment:
Q  149 ttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttatt 210  Q
    ||||||||| | |||||||||||||||||||| |||||| || ||   ||||||||||||||    
T  56157457 ttaagagtgttccaccatagatcctattaatttttttaactttaactatttgatcttttatt 56157396  T

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Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 4871457 - 4871369
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||||||| |||||||||||| | | ||||||||||||| |||  |||  ||||| ||| |||  |||| |||| |||||||||||    
T  4871457 aaataatttcatgttttcattttggttctacaattaataaaacgtatgtttaagtcccccacgtttttctccgtttgtcaaataaatcc 4871369  T

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Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 54865131 - 54865214
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc 103  Q
    |||||| | |||||||||||| ||||| |||||||||||| |   |||| ||||||||| ||| ||||| |||| ||||||||||    
T  54865131 taattttatgttttcattttggtcccataattaataaaat-tgtgttttagtccctcacattttcctccgtttgtcaaataaatc 54865214  T

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Target: scaffold0077 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 54286 - 54100
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||||| || | |||||||||||||  ||| ||||| ||||||||||||||| | |    
T  54286 ggtccctcaaataatttcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcctccgtttgccaaataaatcgtga 54187  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaa 193  Q
    | ||||||| ||| | ||||| ||||||||||| ||||||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  54186 ctgttaagtataaccccaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattattttaatttaaa 54100  T

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Target: scaffold0077; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 52618 - 52721
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||  |||| ||||||||||||||||  |||||||| |||    
T  52618 taatttcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaaataaatcccgacagttaacttt 52717  T
Q  119 aact 122  Q
    ||||    
T  52718 aact 52721  T

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Target: scaffold0118 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 43676 - 43476
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    ||||||||||||||||| ||||||| |||||| ||||| ||||||||||| |||  |||  ||||||||||||| ||||| |||||||||||| |||| |    
T  43676 ggtccctcaaataattttaagtttttattttggtcccataattaataaaacgtatgtttaagtccctcactttttcctccgtttgccaaataagtcctga 43577  T
Q  108 cagttaagtttaa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    | ||||||||||| | ||| | ||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||| | |||||| |||    
T  43576 cggttaagtttaaccccaagtgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgattttt 43477  T
Q  207 t 207  Q
    |    
T  43476 t 43476  T

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Target: scaffold0034 (Bit Score: 81; Significance: 7e-38; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 108539 - 108722
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctcacagttaagttt 118  Q
    ||||||| | ||| ||||||||||||| ||||||||||| |||| ||||| ||||||| |||| |||||||||||||||||||||||  |||||||||||    
T  108539 taatttccattttacattttgatcccataattaataaaacgtacgttttgatccctcattttttcctccatttgccaaataaatccttgcagttaagttt 108638  T
Q  119 aa-ctcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    || | ||||| || | |||||| ||||||| |||| |||||| |||||||||| |||||||||||| ||||||||| | ||||||    
T  108639 aaccccaaataatat-tatggtggaccaaccttaaaagtggtccaccatagatgctattaattattataatttaaaccttttgat 108722  T

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Target: scaffold0034; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 109846 - 109750
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||| |||||||||||||||||||||||| ||| ||||||||||||| |||| |||| |||||||||||||  ||| ||||||||||| |||||    
T  109846 ggtcccttaaataatttcaagttttcattttggtcctacaattaataaaacgtacattttagtccctcacttttttctcaatttgccaaatgaatcc 109750  T

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Target: scaffold1152 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 2576 - 2427
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcctca 107  Q
    |||||||||| ||||||| | ||||||||||| ||||||||||||||||| |||||||||||||||| | |||| ||||  ||| |||||||||| |  |    
T  2576 ggtccctcaattaatttcca-ttttcattttggtcccacaattaataaaaagtaccttttggtcccttagtttttcctctgttttccaaataaattccga 2478  T
Q  108 cagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggt 159  Q
    | ||||| |||||||| || |||||  ||||| ||||||| |||| ||||||    
T  2477 ctgttaactttaactccaaatatgt-aatggtggaccaaccttaaaagtggt 2427  T

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Target: scaffold0011 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 127459 - 127691
Alignment:
Q  19 taatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc-tcacagttaagtt 117  Q
    ||||||||||||||| ||||| ||||| || ||||||||   |  |||||||||||||  ||| ||||| |  | ||||||||||| | |||||||| ||    
T  127459 taatttcaagttttcgttttggtcccataactaataaaactcatgttttggtccctcatgtttgcctccgtcggtcaaataaatccctgacagttaactt 127558  T
Q  118 taac-tcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttttattaaatgg 216  Q
    |||| ||||||   |||||||||  | |||| ||||||||||| |||||||||||||||||||  |||||||||||| | || ||| |||| ||||| ||    
T  127559 taacctcaaat---gtctatggtgaaacaaccttaagagtggtccaccatagatcctattaatgtttttaatttaaaccgttagatttttttttaaaagg 127655  T
Q  217 aggaccgttagatcacgtaggtgtattttatcttac 252  Q
    || ||  |||||| |   |||| |||||||||||||    
T  127656 agaacgattagattaaacaggtctattttatcttac 127691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 21145 - 21339
Alignment:
Q  11 ccctcaaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatc-ctcaca 109  Q
    ||||||| ||||||  | ||||||||||  ||||| ||||||||||| |||||||||| ||||| | |||| ||||| |||||||||||||||  ||       
T  21145 ccctcaattaattttcatttttcattttagtcccataattaataaaaagtaccttttgatcccttagtttttcctccgtttgccaaataaatcattcgtt 21244  T
Q  110 gttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatcttt 206  Q
    ||||||||||||   ||  ||||||||||| ||||||| || |||||||| |||||||||    ||||||| ||| ||||| || | ||||||||||    
T  21245 gttaagtttaaccacaa--atgtctatggtggaccaaccttcagagtggtccaccatagacttcattaattttttaaattttaaccgtttgatcttt 21339  T

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Target: scaffold0078 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 18835 - 18923
Alignment:
Q  16 aaataatttcaagttttcattttgatcccacaattaataaaatgtaccttttggtccctcacttttccctccatttgccaaataaatcc 104  Q
    ||||||||| |||||||||||||| ||||| | |||||||||  ||  |||| |||||||||||||  |||| ||||||||||||||||    
T  18835 aaataattttaagttttcattttggtcccatatttaataaaacttatgttttagtccctcactttttactccgtttgccaaataaatcc 18923  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 63225 - 63117
Alignment:
Q  15 caaataatttcaagttttcattttgatcccacaattaataaa-atgtaccttttggtccctcacttttccctccatttgccaaataaat-cctcacagtt 112  Q
    |||||||||||  |||||||||||| |||||||||||||||| |||  | |||| ||||||||| |||  |||| |||||||||||||| ||| || |||    
T  63225 caaataatttcgtgttttcattttggtcccacaattaataaagatg-gcgttttagtccctcacatttttctccgtttgccaaataaatccctgactgtt 63127  T
Q  113 aagtttaact 122  Q
    ||||||||||    
T  63126 aagtttaact 63117  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 32670 - 32785
Alignment:
Q  92 gccaaataaatcctcacagttaagtttaactcaaattatgtctatggtagaccaactttaagagtggtacaccatagatcctatta--attattttaatt 189  Q
    |||||||||||||| || ||||| ||||||   ||  ||||||||||| ||||||| ||| ||||||| || ||||||||||||||   || ||||||||    
T  32670 gccaaataaatcctaactgttaactttaaccttaa--atgtctatggtggaccaaccttaggagtggtccatcatagatcctattattttttttttaatt 32767  T
Q  190 taaatcctttgatctttt 207  Q
    |||| | |||||||||||    
T  32768 taaaccgtttgatctttt 32785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 1186 - 1137
Alignment:
Q  8 ggtccctcaaataatttcaagttttcattttgatcccacaattaataaaa 57  Q
    |||||||||||||||||| ||||||||||||| ||||| || ||||||||    
T  1186 ggtccctcaaataatttccagttttcattttggtcccataagtaataaaa 1137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 650 - 587
Alignment:
Q  141 gaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgatct 204  Q
    ||||||| ||||||||||| ||||||||| | |||||| | |||||||||||| | ||||||||    
T  650 gaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatct 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 8171 - 8099
Alignment:
Q  129 atgtctatggtagaccaactttaagagtggtacaccatagatcctattaattattttaatttaaatcctttgat 202  Q
    ||||||||||| || |||| ||||||| ||| || |||||||  ||||||||||||||||||||| | ||||||    
T  8171 atgtctatggtggatcaaccttaagag-ggtccatcatagattatattaattattttaatttaaaccgtttgat 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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