View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4644-Insertion-13 (Length: 407)
Name: NF4644-Insertion-13
Description: NF4644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4644-Insertion-13 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 400; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 8 - 407
Target Start/End: Complemental strand, 40624844 - 40624445
Alignment:
| Q |
8 |
acaaaaacttgttagaaatgacagtctagtagtgactaactagcttgccctcactcaaaagctgaaaagtcttttatgtatgtgtgtagtactgacatag |
107 |
Q |
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| T |
40624844 |
acaaaaacttgttagaaatgacagtctagtagtgactaactagcttgccctcactcaaaagctgaaaagtcttttatgtatgtgtgtagtactgacatag |
40624745 |
T |
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| Q |
108 |
tgacatgtttgttgttttagtaatggccactagattgtcataaacatggcaaataagtggaccaaatcaagcatggtgaggtagctagccagccagccaa |
207 |
Q |
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| T |
40624744 |
tgacatgtttgttgttttagtaatggccactagattgtcataaacatggcaaataagtggaccaaatcaagcatggtgaggtagctagccagccagccaa |
40624645 |
T |
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| Q |
208 |
gtgcattatgtaatttttgtgttatttctgactcttttaagatgtttgtacctatgtggggatcctcagcaattgtctgctccaaatctagacaattatt |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40624644 |
gtgcattatgtaatttttgtgttatttctgactcttttaagatgtttgtacctatgtggggatcctcagcaattgtctgctccaaatctagacaattatt |
40624545 |
T |
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| Q |
308 |
gggtccactcagataatatgttagctagctataactttaaactaaccttggtaattggacaaaaagctactacttcgagtaataggttctggttgtggtt |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40624544 |
gggtccactcagataatatgttagctagctataactttaaactaaccttggtaattggacaaaaagctactacttcgagtaataggttctggttgtggtt |
40624445 |
T |
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