View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4644-Insertion-2 (Length: 710)

Name: NF4644-Insertion-2
Description: NF4644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4644-Insertion-2
NF4644-Insertion-2
[»] chr3 (47 HSPs)
chr3 (10-565)||(19975754-19976293)
chr3 (442-565)||(6888733-6888856)
chr3 (442-538)||(33982992-33983088)
chr3 (442-565)||(21075897-21076020)
chr3 (442-565)||(43746292-43746416)
chr3 (442-566)||(46311831-46311955)
chr3 (424-565)||(2868979-2869120)
chr3 (452-565)||(42854312-42854425)
chr3 (442-566)||(46219070-46219195)
chr3 (442-565)||(43735958-43736080)
chr3 (442-538)||(27969473-27969569)
chr3 (419-565)||(7910165-7910311)
chr3 (419-565)||(41933241-41933387)
chr3 (442-533)||(27877532-27877623)
chr3 (400-536)||(21389746-21389882)
chr3 (415-556)||(10267812-10267953)
chr3 (419-569)||(1694938-1695088)
chr3 (400-566)||(31412122-31412287)
chr3 (419-567)||(3994990-3995138)
chr3 (442-536)||(50737952-50738046)
chr3 (442-536)||(50774808-50774902)
chr3 (419-565)||(43087933-43088079)
chr3 (419-567)||(3974739-3974887)
chr3 (415-523)||(15489087-15489194)
chr3 (455-536)||(24310804-24310885)
chr3 (423-566)||(33911618-33911761)
chr3 (400-567)||(54313333-54313500)
chr3 (419-566)||(17525327-17525473)
chr3 (419-523)||(9301067-9301170)
chr3 (419-566)||(29522805-29522952)
chr3 (419-523)||(55423723-55423826)
chr3 (505-568)||(11486109-11486172)
chr3 (442-523)||(7399708-7399788)
chr3 (481-539)||(20510581-20510639)
chr3 (419-485)||(26823062-26823128)
chr3 (419-569)||(51885317-51885462)
chr3 (450-539)||(26844532-26844621)
chr3 (400-485)||(32774429-32774514)
chr3 (419-565)||(1460292-1460438)
chr3 (419-565)||(39095260-39095406)
chr3 (451-565)||(49318267-49318381)
chr3 (419-485)||(1842582-1842648)
chr3 (419-485)||(10804543-10804609)
chr3 (419-485)||(26898262-26898328)
chr3 (400-470)||(41879402-41879472)
chr3 (526-563)||(49506100-49506137)
chr3 (419-523)||(50155551-50155654)
[»] chr7 (35 HSPs)
chr7 (10-381)||(7505374-7505735)
chr7 (10-381)||(31271736-31272097)
chr7 (419-565)||(7505211-7505357)
chr7 (443-565)||(31272129-31272251)
chr7 (442-568)||(1873607-1873733)
chr7 (442-565)||(23025136-23025259)
chr7 (442-565)||(39494055-39494179)
chr7 (419-566)||(35709866-35710013)
chr7 (442-566)||(16526161-16526285)
chr7 (442-535)||(33604559-33604652)
chr7 (442-538)||(47381489-47381585)
chr7 (442-565)||(41200197-41200320)
chr7 (442-538)||(10993187-10993284)
chr7 (442-566)||(49112511-49112635)
chr7 (419-565)||(37471525-37471671)
chr7 (419-565)||(32795678-32795824)
chr7 (419-565)||(47761690-47761836)
chr7 (442-533)||(17511313-17511404)
chr7 (442-533)||(17541810-17541901)
chr7 (442-566)||(40685635-40685759)
chr7 (419-565)||(24764155-24764301)
chr7 (400-565)||(47099118-47099283)
chr7 (442-565)||(33889180-33889303)
chr7 (474-526)||(2621481-2621533)
chr7 (400-523)||(8613760-8613882)
chr7 (419-567)||(8781447-8781595)
chr7 (400-568)||(30071986-30072154)
chr7 (419-523)||(39560512-39560615)
chr7 (419-565)||(37085721-37085867)
chr7 (456-512)||(4266886-4266942)
chr7 (415-523)||(33590275-33590382)
chr7 (419-540)||(3699169-3699290)
chr7 (442-513)||(17475748-17475819)
chr7 (442-513)||(17577395-17577466)
chr7 (419-470)||(34202662-34202713)
[»] chr4 (54 HSPs)
chr4 (43-381)||(19240913-19241235)
chr4 (400-565)||(44341168-44341333)
chr4 (417-566)||(19240743-19240892)
chr4 (400-536)||(32767585-32767721)
chr4 (442-566)||(27869996-27870120)
chr4 (442-565)||(20034307-20034430)
chr4 (442-565)||(17543722-17543846)
chr4 (442-566)||(32594017-32594141)
chr4 (442-565)||(39345806-39345930)
chr4 (442-565)||(47295539-47295662)
chr4 (442-536)||(43286271-43286365)
chr4 (442-567)||(45522473-45522598)
chr4 (425-565)||(951348-951488)
chr4 (454-538)||(3415234-3415318)
chr4 (442-565)||(54134501-54134624)
chr4 (443-564)||(1705217-1705337)
chr4 (442-565)||(2323805-2323928)
chr4 (442-536)||(52464105-52464199)
chr4 (456-566)||(41361231-41361341)
chr4 (400-565)||(9455304-9455469)
chr4 (442-566)||(34030271-34030394)
chr4 (419-565)||(56264413-56264559)
chr4 (447-568)||(1324942-1325065)
chr4 (442-562)||(34859069-34859189)
chr4 (423-566)||(40731215-40731358)
chr4 (419-566)||(401367-401514)
chr4 (419-565)||(19823653-19823799)
chr4 (419-565)||(53925306-53925452)
chr4 (445-538)||(51401354-51401447)
chr4 (442-565)||(53724827-53724950)
chr4 (468-565)||(54787555-54787652)
chr4 (419-513)||(15194495-15194589)
chr4 (443-559)||(1139022-1139138)
chr4 (419-523)||(26706917-26707020)
chr4 (419-523)||(35666590-35666693)
chr4 (419-565)||(6643303-6643449)
chr4 (419-565)||(30000213-30000358)
chr4 (454-566)||(48152681-48152793)
chr4 (400-513)||(54093977-54094090)
chr4 (445-549)||(7138482-7138587)
chr4 (419-566)||(19521773-19521920)
chr4 (419-523)||(39240434-39240537)
chr4 (419-523)||(50097402-50097505)
chr4 (419-523)||(51435584-51435687)
chr4 (457-535)||(50004741-50004818)
chr4 (526-565)||(6366323-6366362)
chr4 (506-565)||(16029724-16029783)
chr4 (419-513)||(16623478-16623572)
chr4 (419-470)||(44871520-44871571)
chr4 (270-309)||(51204241-51204280)
chr4 (442-523)||(39809651-39809731)
chr4 (442-487)||(16029783-16029828)
chr4 (526-567)||(32555640-32555681)
chr4 (419-523)||(35392755-35392858)
[»] chr6 (32 HSPs)
chr6 (62-251)||(27966371-27966549)
chr6 (442-565)||(20139188-20139311)
chr6 (442-565)||(22193558-22193681)
chr6 (204-381)||(27966550-27966722)
chr6 (419-565)||(27966740-27966886)
chr6 (400-536)||(31472456-31472592)
chr6 (442-565)||(15065901-15066024)
chr6 (450-565)||(12272226-12272341)
chr6 (442-565)||(10997714-10997837)
chr6 (425-567)||(31655523-31655665)
chr6 (442-565)||(11369588-11369712)
chr6 (432-565)||(34178403-34178536)
chr6 (450-528)||(3044290-3044368)
chr6 (442-559)||(32465659-32465776)
chr6 (419-565)||(2702997-2703143)
chr6 (419-565)||(17547462-17547608)
chr6 (10-60)||(27966049-27966099)
chr6 (419-563)||(29641046-29641190)
chr6 (432-563)||(31511238-31511369)
chr6 (398-564)||(15183726-15183892)
chr6 (442-530)||(12076652-12076739)
chr6 (419-523)||(2067151-2067254)
chr6 (432-565)||(15068034-15068167)
chr6 (442-517)||(17869273-17869348)
chr6 (419-565)||(26555218-26555368)
chr6 (421-523)||(4170937-4171038)
chr6 (450-517)||(17879033-17879100)
chr6 (487-573)||(10233678-10233764)
chr6 (419-513)||(9035100-9035194)
chr6 (419-470)||(22988171-22988222)
chr6 (419-470)||(23800174-23800225)
chr6 (419-485)||(12577324-12577390)
[»] chr5 (46 HSPs)
chr5 (394-566)||(37205997-37206169)
chr5 (411-566)||(35038728-35038883)
chr5 (442-566)||(6955798-6955922)
chr5 (443-565)||(10642053-10642175)
chr5 (442-565)||(6238156-6238280)
chr5 (442-565)||(6899866-6899990)
chr5 (442-565)||(35838081-35838205)
chr5 (442-566)||(38356032-38356156)
chr5 (442-565)||(21731688-21731811)
chr5 (406-536)||(38976219-38976349)
chr5 (442-566)||(24477256-24477381)
chr5 (442-567)||(4699936-4700062)
chr5 (442-565)||(42860322-42860445)
chr5 (442-566)||(20338515-20338639)
chr5 (424-538)||(33908117-33908231)
chr5 (442-538)||(9996241-9996337)
chr5 (408-526)||(31230266-31230384)
chr5 (419-565)||(26264392-26264538)
chr5 (442-565)||(38986612-38986735)
chr5 (475-565)||(74953-75043)
chr5 (445-538)||(1398370-1398464)
chr5 (442-565)||(36016253-36016368)
chr5 (419-566)||(7949728-7949875)
chr5 (443-573)||(5361197-5361327)
chr5 (418-565)||(6452985-6453133)
chr5 (419-527)||(36866128-36866236)
chr5 (513-566)||(1845415-1845468)
chr5 (419-523)||(28759372-28759475)
chr5 (419-565)||(21151731-21151877)
chr5 (432-565)||(26507198-26507331)
chr5 (474-528)||(17085407-17085461)
chr5 (419-523)||(2466308-2466411)
chr5 (442-515)||(4975803-4975876)
chr5 (419-523)||(20122712-20122815)
chr5 (526-565)||(21158973-21159012)
chr5 (442-536)||(3436727-3436821)
chr5 (442-491)||(3296166-3296215)
chr5 (419-565)||(18922122-18922268)
chr5 (419-565)||(21162674-21162820)
chr5 (526-565)||(7344797-7344836)
chr5 (442-523)||(1840570-1840650)
chr5 (419-485)||(16748996-16749062)
chr5 (530-567)||(4725139-4725176)
chr5 (526-567)||(7827051-7827092)
chr5 (419-523)||(16653911-16654014)
chr5 (443-523)||(27345289-27345368)
[»] chr2 (38 HSPs)
chr2 (400-539)||(15614123-15614262)
chr2 (442-566)||(25096277-25096401)
chr2 (442-565)||(21747391-21747514)
chr2 (442-565)||(15560582-15560705)
chr2 (442-565)||(29201422-29201545)
chr2 (442-565)||(40000803-40000925)
chr2 (442-566)||(20922776-20922900)
chr2 (450-566)||(42730738-42730854)
chr2 (432-536)||(5271075-5271179)
chr2 (445-565)||(9470798-9470918)
chr2 (394-536)||(38838006-38838148)
chr2 (469-565)||(17088255-17088352)
chr2 (445-565)||(26556501-26556622)
chr2 (400-568)||(4564889-4565056)
chr2 (469-540)||(17071256-17071327)
chr2 (442-565)||(17920761-17920884)
chr2 (422-565)||(29810679-29810822)
chr2 (419-565)||(27495846-27495992)
chr2 (469-536)||(17077328-17077395)
chr2 (419-567)||(31742840-31742988)
chr2 (442-527)||(40861051-40861136)
chr2 (474-565)||(4471014-4471105)
chr2 (419-565)||(1002507-1002653)
chr2 (419-523)||(1346280-1346383)
chr2 (419-566)||(28222875-28223022)
chr2 (419-523)||(35439538-35439641)
chr2 (419-513)||(2650090-2650184)
chr2 (432-565)||(18258065-18258197)
chr2 (432-528)||(38570685-38570778)
chr2 (419-523)||(10261315-10261418)
chr2 (419-523)||(10440146-10440249)
chr2 (473-525)||(4918250-4918302)
chr2 (421-485)||(13247771-13247835)
chr2 (419-565)||(36240754-36240900)
chr2 (526-565)||(26984575-26984614)
chr2 (422-485)||(30801211-30801274)
chr2 (503-565)||(12465989-12466051)
chr2 (531-565)||(30555605-30555639)
[»] chr1 (36 HSPs)
chr1 (394-565)||(31489464-31489635)
chr1 (442-565)||(33189000-33189123)
chr1 (442-565)||(12745551-12745675)
chr1 (442-565)||(12756540-12756664)
chr1 (442-566)||(42763260-42763384)
chr1 (442-565)||(9660834-9660957)
chr1 (426-565)||(32057530-32057669)
chr1 (442-567)||(45757249-45757374)
chr1 (442-565)||(43781178-43781301)
chr1 (442-536)||(46237605-46237699)
chr1 (570-697)||(27883894-27884020)
chr1 (442-566)||(48470438-48470562)
chr1 (419-568)||(5114866-5115015)
chr1 (442-566)||(49229174-49229297)
chr1 (422-566)||(28199180-28199324)
chr1 (419-565)||(30533367-30533512)
chr1 (442-566)||(47188575-47188696)
chr1 (419-566)||(48812550-48812697)
chr1 (422-565)||(19406610-19406753)
chr1 (419-565)||(39995470-39995616)
chr1 (442-536)||(6501612-6501706)
chr1 (419-566)||(40601744-40601891)
chr1 (421-563)||(42102156-42102298)
chr1 (419-566)||(44372894-44373041)
chr1 (419-566)||(44922154-44922301)
chr1 (400-565)||(45038952-45039117)
chr1 (450-538)||(4220885-4220973)
chr1 (419-523)||(1858786-1858889)
chr1 (419-523)||(30723307-30723410)
chr1 (419-523)||(41310539-41310642)
chr1 (450-514)||(15699330-15699394)
chr1 (419-565)||(40412529-40412675)
chr1 (440-536)||(45565763-45565859)
chr1 (419-565)||(50511991-50512137)
chr1 (419-485)||(20722233-20722299)
chr1 (419-485)||(21088540-21088606)
[»] chr8 (34 HSPs)
chr8 (442-567)||(35813442-35813568)
chr8 (442-536)||(42739371-42739465)
chr8 (442-566)||(30436473-30436598)
chr8 (419-565)||(15243747-15243893)
chr8 (442-565)||(2349667-2349789)
chr8 (442-566)||(3654314-3654438)
chr8 (442-538)||(3940670-3940767)
chr8 (419-566)||(6266235-6266382)
chr8 (424-565)||(9201084-9201224)
chr8 (400-565)||(6142868-6143034)
chr8 (419-566)||(5927042-5927189)
chr8 (419-565)||(24101755-24101901)
chr8 (442-562)||(28968170-28968290)
chr8 (419-566)||(38231735-38231881)
chr8 (419-566)||(41395775-41395922)
chr8 (419-565)||(31894942-31895087)
chr8 (443-565)||(29894474-29894596)
chr8 (418-522)||(45451754-45451859)
chr8 (468-565)||(19293590-19293687)
chr8 (419-523)||(26098281-26098384)
chr8 (419-513)||(15041352-15041446)
chr8 (422-523)||(40027752-40027852)
chr8 (419-523)||(7161578-7161681)
chr8 (419-523)||(11202189-11202292)
chr8 (419-523)||(37819219-37819322)
chr8 (419-523)||(41827561-41827664)
chr8 (432-565)||(38894680-38894813)
chr8 (442-523)||(7433417-7433497)
chr8 (400-513)||(41644165-41644278)
chr8 (419-523)||(24476390-24476493)
chr8 (419-523)||(27640026-27640129)
chr8 (419-565)||(20823510-20823656)
chr8 (526-565)||(356409-356448)
chr8 (421-523)||(44679165-44679266)
[»] scaffold1449 (1 HSPs)
scaffold1449 (469-565)||(1581-1677)
[»] scaffold0295 (2 HSPs)
scaffold0295 (444-566)||(6138-6261)
scaffold0295 (473-566)||(3653-3747)
[»] scaffold0219 (1 HSPs)
scaffold0219 (442-565)||(16646-16769)
[»] scaffold0124 (1 HSPs)
scaffold0124 (419-566)||(40058-40205)
[»] scaffold0036 (1 HSPs)
scaffold0036 (419-566)||(27586-27733)
[»] scaffold0007 (2 HSPs)
scaffold0007 (419-565)||(56195-56340)
scaffold0007 (419-485)||(231673-231739)
[»] scaffold0664 (1 HSPs)
scaffold0664 (419-523)||(7785-7888)
[»] scaffold0173 (1 HSPs)
scaffold0173 (442-565)||(21968-22091)
[»] scaffold1243 (1 HSPs)
scaffold1243 (419-565)||(1976-2122)
[»] scaffold0495 (1 HSPs)
scaffold0495 (487-573)||(10402-10488)
[»] scaffold1318 (1 HSPs)
scaffold1318 (419-513)||(962-1056)
[»] scaffold0360 (1 HSPs)
scaffold0360 (419-523)||(12804-12907)


Alignment Details
Target: chr3 (Bit Score: 343; Significance: 0; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 10 - 565
Target Start/End: Complemental strand, 19976293 - 19975754
Alignment:
Q  10 aatcacttgctactgtcatggtaggccgctgctatatggcctggtgattgtgtagttcctggacggtgtgatgttggtttagggagcatgtgttttttgc 109  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19976293 aatcacttgctattgtcatggtaggccgcggctatatggcctggtgattgtgtagttcctggacggtgtgatgttggtttagggagcatgtgttttttgc 19976194  T
Q  110 tactgccataggcttctttgttatatgtatacttatcttgtttaatgtcttttggtgaatttttggtgaattgatgccaacattaatttggtggatgtgc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||    
T  19976193 tactgccataggcttctttgttatatgtatacttatcttgtttaatgtcttttggtg-----------aattgatgccaacattaatttggtggatgtgc 19976105  T
Q  210 agtgagcttcttatgttagattgctactgctatatcagaggcttttgtg---ttttttcggcttagcttgagtggattgaggccattaataatattagct 306  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||   ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  19976104 agtaagcttcttatgttagattgctactgctatatcagaggattttgtgtttttttttctgctcagcttgagtggattgaggccattaataatattagct 19976005  T
Q  307 gtt-nnnnnnnttgtaaaaatgatagagcattaaaagccatgccttcaaaaccacaccaaacttaacccacttgtannnnnnnnccgagctgcggggcta 405  Q
    |||        || ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||        |         ||||||    
T  19976004 gttaaaattttttataaaaatgatagaactttaaaagccattccttcaaaaccacaccaaacttaacccacttgtattttttttc---------gggcta 19975914  T
Q  406 cccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagcc 505  Q
    |||||||| | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19975913 cccgtagcgccaacgggctagcccggacgggtaacgagcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattagacccaagcc 19975814  T
Q  506 ctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||||||||||||  |||||||||||||  |||| ||||||||||||||||||    
T  19975813 ctacattttattcgggcttttcggccggcccatacgacccgacccgttttgacagctcta 19975754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 6888733 - 6888856
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||     
T  6888733 ggcttttccgggccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagccctatattttatgcgggctttcgggccggcccatacg 6888832  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    | ||||||| |||||||| |||||    
T  6888833 ggccggcccattttgacaactcta 6888856  T

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Target: chr3; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 442 - 538
Target Start/End: Complemental strand, 33983088 - 33982992
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccat 538  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33983088 ggcttttccgggccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagccctacattttatttgggctttcgggccggcccat 33982992  T

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Target: chr3; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 21075897 - 21076020
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  21075897 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 21075996  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  21075997 gcccggcccattttgacagctcta 21076020  T

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Target: chr3; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 43746292 - 43746416
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  43746292 ggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 43746391  T
Q  541 agcccggcccgttttgacagctcta 565  Q
     ||||||||| ||||||||||||||    
T  43746392 ggcccggcccattttgacagctcta 43746416  T

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Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 442 - 566
Target Start/End: Complemental strand, 46311955 - 46311831
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  46311955 ggcttttacgggccgggctaaaaagccctcttcaattttgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 46311856  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||| ||| |||||||||||||||    
T  46311855 gcccgacccattttgacagctctac 46311831  T

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Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 424 - 565
Target Start/End: Complemental strand, 2869120 - 2868979
Alignment:
Q  424 tagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggct 523  Q
    ||||||| |||||| |  |||||| |||||||||| |||||||||||  | ||||||||||||||||| | |||||||||| |||| |||||||||||||    
T  2869120 tagcccgtacgggttatgggctttcacgggccgggttaaaaagccctaaagaaattcgggctgcaattttcaggcccaagctctacgttttattcgggct 2869021  T
Q  524 ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||||| |||||||| ||||| ||| ||||||||||||||    
T  2869020 ttcgggccagcccatacggcccgaccccttttgacagctcta 2868979  T

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Target: chr3; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 565
Target Start/End: Original strand, 42854312 - 42854425
Alignment:
Q  452 ggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccg 551  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||   |||||||     
T  42854312 ggccgggctaaaaagccttgaaaaaattcgggctccaattattaggcccaagccctacgttttatgcgggctttcgggctggcccatacgagccggccca 42854411  T
Q  552 ttttgacagctcta 565  Q
    ||||||||||||||    
T  42854412 ttttgacagctcta 42854425  T

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Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 442 - 566
Target Start/End: Complemental strand, 46219195 - 46219070
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggc-tttcgggccggcccatac 540  Q
    |||||||||||||| ||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| |||    
T  46219195 ggcttttacgggcccggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggcttttcgggccggcccttac 46219096  T
Q  541 agcccggcccgttttgacagctctac 566  Q
     ||||||||| ||| |||||||||||    
T  46219095 ggcccggcccatttcgacagctctac 46219070  T

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Target: chr3; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 43736080 - 43735958
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||||||||||||||||||||||||| ||||| || ||||| ||||| || |||||| ||||| | |||||||||||||||||||| |||||||||     
T  43736080 ggcttttacgggccgggctaaaaagccctagaaaattt-gggctccaatttttcggcccaggccctgcgttttattcgggctttcgggctggcccatacg 43735982  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||| ||| ||||||||||||||    
T  43735981 gcccgacccattttgacagctcta 43735958  T

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Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 442 - 538
Target Start/End: Complemental strand, 27969569 - 27969473
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccat 538  Q
    ||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||| ||||    
T  27969569 ggctttttcggtccgggctaaaaagcccgggaaaaattcgggctccaattattaggcccaagccctacgttttatgcgggctttcgggtcggtccat 27969473  T

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Target: chr3; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 7910165 - 7910311
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  7910165 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 7910262  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||||||||||||| | ||||||||||||||||||||||    
T  7910263 cgggctaaacgggccggcccatacgggccggcccgttttgacagctcta 7910311  T

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Target: chr3; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 41933387 - 41933241
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| |||||||||| |||||||||   |||||||||||| |||| | |||||||||||||||| |||| |||    
T  41933387 cgggctagccctaacgggtaccgggcttttaagggccgggctgaaaagccctattaaaattcgggct-caatattttaggcccaagccctatattt-att 41933290  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||||||||||||| ||||||||||||||||||||||||    
T  41933289 cgggctaaacgggccggcccatacggcccggcccgttttgacagctcta 41933241  T

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Target: chr3; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 442 - 533
Target Start/End: Complemental strand, 27877623 - 27877532
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccgg 533  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  27877623 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcggaccgg 27877532  T

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Target: chr3; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 400 - 536
Target Start/End: Complemental strand, 21389882 - 21389746
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 499  Q
    ||||||||||||||||  ||||||||||||  |||||   | ||||||||||||| |||| ||||| ||||    ||||| ||||||| ||| |||||||    
T  21389882 gggctacccgtagcccgcacgggctagccctaacgggcttcgggcttttacgggctgggccaaaaaaccctatttaaatttgggctgccatttttaggcc 21389783  T
Q  500 caagccctacattttattcgggctttcgggccggccc 536  Q
    ||||||||||||||| ||| |||||||| ||||||||    
T  21389782 caagccctacatttttttcaggctttcgagccggccc 21389746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 556
Target Start/End: Complemental strand, 10267953 - 10267812
Alignment:
Q  415 ctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattt 513  Q
    |||||||||||||||  ||||||||| |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||| ||||||| | ||    
T  10267953 ctaacgggctagccctaacgggtaacgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccgagccctata-tt 10267856  T
Q  514 tattcgggct-ttcgggccggcccatacagcccggcccgttttg 556  Q
    ||||||||||   ||||||||||||||| |||| |||| |||||    
T  10267855 tattcgggctaaacgggccggcccatacggcccagcccattttg 10267812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 569
Target Start/End: Complemental strand, 1695088 - 1694938
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  | ||||| | || ||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| |||| |||    
T  1695088 cgggctagccctaaagggtaccgggtttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctatattt-att 1694991  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctacctg 569  Q
    ||||||   |||||| ||||||||   ||||||||||||||||||||||||||    
T  1694990 cgggctaaacgggccagcccatacgagccggcccgttttgacagctctacctg 1694938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 31412122 - 31412287
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggc 498  Q
    ||||||||||| |||||  |||||||||||  | ||||| | || ||||| ||||||||||||||||||||   |||||||||||| |||| | ||||||    
T  31412122 gggctacccgtggccctt-cgggctagccctaatgggtaccgggtttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggc 31412219  T
Q  499 ccaagccctacattttattcgggct-ttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    |||||||||| | ||||||||||||   ||||||| || |||| | |||||||||||||||||||||||    
T  31412220 ccaagccctata-tttattcgggctaaacgggccgccctatacgggccggcccgttttgacagctctac 31412287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 419 - 567
Target Start/End: Complemental strand, 3995138 - 3994990
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||  ||||||||||||||||||||   |||||||||||| ||||  ||| |||| |||||||| |||| ||     
T  3995138 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcgggct-caatatttaaggcctaagccctatatttaat- 3995041  T
Q  518 cgggctttc-gggccggcccatacagcccggcccgttttgacagctctacc 567  Q
    ||||||    |||||||||||||| ||||||||||||||||||||||||||    
T  3995040 cgggctaaatgggccggcccatacggcccggcccgttttgacagctctacc 3994990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 536
Target Start/End: Original strand, 50737952 - 50738046
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    ||||||| |||||||||||||||| ||||| |||||||||| |||| |||  | |||||| |||||||||||||||||| | ||||||| |||||    
T  50737952 ggctttttcgggccgggctaaaaaaccctgaaaaaattcggactgctatttatcggcccaggccctacattttattcggacattcgggctggccc 50738046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 536
Target Start/End: Complemental strand, 50774902 - 50774808
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    ||||||| |||||||||||||||| ||||| |||||||||| |||| |||  | |||||| |||||||||||||||||| | ||||||| |||||    
T  50774902 ggctttttcgggccgggctaaaaaaccctgaaaaaattcggactgctatttatcggcccaggccctacattttattcggacattcgggctggccc 50774808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 43088079 - 43087933
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||| ||||| |||| | |||||||||| ||||| | ||||||    
T  43088079 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaatttgggct-caatattttaggcccaaaccctata-tttatt 43087982  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
     |||||   || ||||||||||||| |||| ||||||||||||||||||    
T  43087981 tgggctaaacgagccggcccatacaacccgacccgttttgacagctcta 43087933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 419 - 567
Target Start/End: Original strand, 3974739 - 3974887
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | || ||||  ||||||||||||||||||||   |||||||||||| ||||  ||| |||| |||||||| |||| ||     
T  3974739 cgggctagccctaacgggtagcgggatttttagggccgggctaaaaagccctattaaaattcgggct-caatatttaaggcctaagccctatatttaat- 3974836  T
Q  518 cgggctttc-gggccggcccatacagcccggcccgttttgacagctctacc 567  Q
    ||||||    |||||||||||||| ||||||||||||||||||||||||||    
T  3974837 cgggctaaatgggccggcccatacggcccggcccgttttgacagctctacc 3974887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 15489194 - 15489087
Alignment:
Q  415 ctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattt 513  Q
    |||||||||||||||  ||||||| ||| |||||| ||| ||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||    
T  15489194 ctaacgggctagccctaacgggtaccagacttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tt 15489097  T
Q  514 tattcgggct 523  Q
    ||||||||||    
T  15489096 tattcgggct 15489087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 536
Target Start/End: Complemental strand, 24310885 - 24310804
Alignment:
Q  455 cgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    |||||||||||  |||  ||||||||||||||||||| ||||| | || |||||| ||||||||||| ||||||||||||||    
T  24310885 cgggctaaaaaatcctaaaaaaattcgggctgcaatttttaggtctaaaccctacgttttattcgggttttcgggccggccc 24310804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 566
Target Start/End: Complemental strand, 33911761 - 33911618
Alignment:
Q  423 ctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcggg 521  Q
    |||||||  ||||||| | | |||||| |||||||||||||||| |||   |||||||||||| |||| | ||||||| |||||||| |||| |||||||    
T  33911761 ctagccctaacgggtaccggacttttaagggccgggctaaaaagtcctattaaaattcgggct-caatattttaggcctaagccctatattt-attcggg 33911664  T
Q  522 cttt-cgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||   ||| ||||||||||| | |||||||||||||||||||||||    
T  33911663 ctaaacggaccggcccatacgggccggcccgttttgacagctctac 33911618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 567
Target Start/End: Original strand, 54313333 - 54313500
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggc 498  Q
    ||||||||||  |||||  |||||||||||  ||||||| | |||||||  ||||||||||||||||||||   |||||||||||| |||| | | ||||    
T  54313333 gggctacccgcggccctttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccctattaaaattcgggct-caatatttaaggc 54313431  T
Q  499 ccaagccctacattttattcgggct-ttcgggccggcccatacagcccggcccgttttgacagctctacc 567  Q
    |||||||||| |  ||| |||||||   ||||| ||||| ||  ||||||||||||||||||||||||||    
T  54313432 ccaagccctata-attaatcgggctaaacgggctggcccgtaaggcccggcccgttttgacagctctacc 54313500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 17525327 - 17525473
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    ||||||||||| ||||| || | |||||||| | ||||||||||||||||||   |||||||||||| |||| | |||| ||||||||||| |||| |||    
T  17525327 cgggctagccctgacggataccgggcttttaagagccgggctaaaaagccctattaaaattcgggct-caatattttagacccaagccctatattt-att 17525424  T
Q  518 cgggctttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    |||     |||||||| |||||| | ||||| |||||||||||||||||    
T  17525425 cggctaaacgggccggtccatacgggccggcacgttttgacagctctac 17525473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 9301067 - 9301170
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   ||||||| |||| |||| | |||||||||||||||| | ||||||    
T  9301067 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattccggct-caatattttaggcccaagccctata-tttatt 9301164  T
Q  518 cgggct 523  Q
    ||||||    
T  9301165 cgggct 9301170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 29522805 - 29522952
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||  ||||||||||||||||||||   ||||||||| || ||||  ||| ||||||| ||||| | || ||     
T  29522805 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcggact-caatatttaaggcccaaaccctataattaat- 29522902  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||   ||||||||||||||  |||||||||||||||||||||||||    
T  29522903 cgggctaaacgggccggcccatagggcccggcccgttttgacagctctac 29522952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 55423826 - 55423723
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||| ||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  55423826 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 55423729  T
Q  518 cgggct 523  Q
    ||||||    
T  55423728 cgggct 55423723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 505 - 568
Target Start/End: Complemental strand, 11486172 - 11486109
Alignment:
Q  505 cctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctctacct 568  Q
    ||||| |||| || ||||||||||| ||||||||   |||||||||||||||||||||||||||    
T  11486172 cctacgttttttttgggctttcgggtcggcccatttggcccggcccgttttgacagctctacct 11486109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 7399788 - 7399708
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct 523  Q
    |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||||||||    
T  7399788 ggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttattcgggct 7399708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 539
Target Start/End: Complemental strand, 20510639 - 20510581
Alignment:
Q  481 gggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccata 539  Q
    ||||||||||| |||||||||| |||| | ||||||| ||||||||| |||||||||||    
T  20510639 gggctgcaatttttaggcccaaaccctgcgttttatttgggctttcgagccggcccata 20510581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 419 - 485
Target Start/End: Complemental strand, 26823128 - 26823062
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   ||||||||||||    
T  26823128 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct 26823062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 419 - 569
Target Start/End: Original strand, 51885317 - 51885462
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | | |||||  ||||||||||||||||||||   |||||||||||| ||||  ||| ||||||||||||| |||| ||     
T  51885317 cgggctagccctaacgggtagcggactttttagggccgggctaaaaagccctattaaaattcgggct-caatatttaaggcccaagccctatatttaat- 51885414  T
Q  518 cgggctttcgggccggcccatacagcccggcccgttttgacagctctacctg 569  Q
    ||||||       |||||||||||||||| ||||||||||||||||| ||||    
T  51885415 cgggctaaa----cggcccatacagcccgacccgttttgacagctctgcctg 51885462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 539
Target Start/End: Original strand, 26844532 - 26844621
Alignment:
Q  450 cgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccata 539  Q
    |||||| ||||||||||| ||  ||| ||| || |||| | | || ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  26844532 cgggccaggctaaaaagctctaaaaatatttggactgctacttttcggcccaaaccctacattttattcggactttctggccggcccata 26844621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 485
Target Start/End: Original strand, 32774429 - 32774514
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    ||||||||||  |||||  |||||||||||  ||||||| | |||||||  ||||||||||||||||||||   ||||||||||||    
T  32774429 gggctacccgcggccctttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccctattaaaattcgggct 32774514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 1460292 - 1460438
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    |||||||||||  |||| || | |||||||  ||||||||||||||||| ||   |||||||||||| ||||  ||| ||||||||||||| |||| ||     
T  1460292 cgggctagccctaacggatagcgggctttttagggccgggctaaaaagctctattaaaattcgggct-caatatttaaggcccaagccctatatttaat- 1460389  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    | | ||   ||||||||||||||| |||||| |||||||||||||||||    
T  1460390 cagactaaacgggccggcccatacggcccggtccgttttgacagctcta 1460438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 39095260 - 39095406
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | || ||||| |||||||| |||||||| ||   |||||||||||| |||| | |||||||||| ||||| ||||| ||    
T  39095260 cgggctagccctaacgggtaccgggtttttaagggccgggttaaaaagctctattaaaattcgggct-caatattttaggcccaaaccctatatttt-tt 39095357  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   |||||||||| ||||  ||| | |||||||||||||||||    
T  39095358 cgggctaaacgggccggcctatacgacccagtccgttttgacagctcta 39095406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 565
Target Start/End: Complemental strand, 49318381 - 49318267
Alignment:
Q  451 gggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttattcgggcttt-cgggccggcccatacagcccggc 548  Q
    |||||||| |||||| ||||   |||||||||||| ||||  ||| ||||||||||||| |||| || ||||||   ||||||||||||||| ||||| |    
T  49318381 gggccgggttaaaaaaccctattaaaattcgggct-caatatttaaggcccaagccctatatttaat-cgggctaaacgggccggcccatacggcccgac 49318284  T
Q  549 ccgttttgacagctcta 565  Q
    |||||||||||||||||    
T  49318283 ccgttttgacagctcta 49318267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 485
Target Start/End: Complemental strand, 1842648 - 1842582
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    |||||||||||  ||||||| | |||||||| |||||||||||||||||| |   ||||||||||||    
T  1842648 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccatattaaaattcgggct 1842582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 485
Target Start/End: Original strand, 10804543 - 10804609
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    |||||||||||  |||||||   |||||||| ||||||||||||||||||||   ||||||||||||    
T  10804543 cgggctagccctaacgggtactgggcttttaagggccgggctaaaaagccctattaaaattcgggct 10804609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 485
Target Start/End: Complemental strand, 26898328 - 26898262
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    |||||||||||  ||||||| | | |||||| ||||||||||||||||||||   ||||||||||||    
T  26898328 cgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccctattaaaattcgggct 26898262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 41879402 - 41879472
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccct 470  Q
    ||||||||||  |||||  |||||||||||  ||||||| ||| |||||  ||||||||||||||||||||    
T  41879402 gggctacccgcggccctttcgggctagccctaacgggtaccagactttttagggccgggctaaaaagccct 41879472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 563
Target Start/End: Complemental strand, 49506137 - 49506100
Alignment:
Q  526 cgggccggcccatacagcccggcccgttttgacagctc 563  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  49506137 cgggccggtccatacagcccgacccgttttgacagctc 49506100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 50155551 - 50155654
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||| ||||||||||||||||   |||||| ||||| |||| | |||| ||||||||||| | ||||||    
T  50155551 cgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccctattaaaatttgggct-caatattttagacccaagccctata-tttatt 50155648  T
Q  518 cgggct 523  Q
    ||||||    
T  50155649 cgggct 50155654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 10 - 381
Target Start/End: Complemental strand, 7505735 - 7505374
Alignment:
Q  10 aatcacttgctactgtcatggtaggccgctgctatatggcctggtgattgtgtagttcctggacggtgtgatgttggtttagggagcatgtgttttttgc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7505735 aatcacttgctactgtcatggtaggccgctgctatatggcctggtgattgtgtagttcctggacggtgtgatgttggtttagggagcatgtgttttttgc 7505636  T
Q  110 tactgccataggcttctttgttatatgtatacttatcttgtttaatgtcttttggtgaatttttggtgaattgatgccaacattaatttggtggatgtgc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||    
T  7505635 tactgccataggcttctttgttatatgtatacttatcttgtttaatgtcttttggtg-----------aattgatgccaacattaatttggtggatgtgc 7505547  T
Q  210 agtgagcttcttatgttagattgctactgctatatcagaggcttttgtgttttttcggcttagcttgagtggattgaggccattaataatattagctgtt 309  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  7505546 agtaagcttcttatgttagattgctactgctacatcagaggcttttgtgttttttctgctcagcttgagtggattgaggccattaataatattagttgtt 7505447  T
Q  310 -nnnnnnnttgtaaaaatgatagagcattaaaagccatgccttcaaaaccacaccaaacttaacccacttgta 381  Q
            || ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  7505446 aaaaaaaattataaaaatgatagaactttaaaagccatgccttcaaaaccacaccaaacttaacccacttgta 7505374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 10 - 381
Target Start/End: Original strand, 31271736 - 31272097
Alignment:
Q  10 aatcacttgctactgtcatggtaggccgctgctatatggcctggtgattgtgtagttcctggacggtgtgatgttggtttagggagcatgtgttttttgc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31271736 aatcacttgctactgtcatggtaggccgctgctatatggcctggtgattgtgtagttcctggatggtgtgatgttggtttagggagcatgtgttttttgc 31271835  T
Q  110 tactgccataggcttctttgttatatgtatacttatcttgtttaatgtcttttggtgaatttttggtgaattgatgccaacattaatttggtggatgtgc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||     
T  31271836 tactgccataggcttctttgttatatgtatacttatcttgtttaatgtc-----------ttttggtgaattgatgccaacattaatttggtggatgtgg 31271924  T
Q  210 agtgagcttcttatgttagattgctactgctatatcagaggcttttgtgttttttcggcttagcttgagtggattgaggccattaataatattagctgtt 309  Q
    ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  31271925 agtaagcttcttatgttagattgctactgctatatcagagacttttgtgttttttctgctcagcttgagtggattgaggccattaataatattagctgtt 31272024  T
Q  310 -nnnnnnnttgtaaaaatgatagagcattaaaagccatgccttcaaaaccacaccaaacttaacccacttgta 381  Q
            || ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  31272025 aaaaaaatttataaaaatgatagaactttaaaagccatgccttcaaaaccacaccaaacttaacccacttgta 31272097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 7505357 - 7505211
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 518  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7505357 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 7505258  T
Q  519 gggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
     ||||||||||||||||||||| | ||||||||||||||||||||||    
T  7505257 aggctttcgggccggcccatacgggccggcccgttttgacagctcta 7505211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 443 - 565
Target Start/End: Original strand, 31272129 - 31272251
Alignment:
Q  443 gcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacag 542  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |    
T  31272129 gcttttacgggccgggctaaaaagccctggaaaaattcgtgctgcaattattaggcccaagccctacattttattcgggcttttgggtcggcccatacgg 31272228  T
Q  543 cccggcccgttttgacagctcta 565  Q
    |||| ||||||||||||||||||    
T  31272229 cccgacccgttttgacagctcta 31272251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 442 - 568
Target Start/End: Complemental strand, 1873733 - 1873607
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  1873733 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 1873634  T
Q  542 gcccggcccgttttgacagctctacct 568  Q
    ||||||||| |||||||||||||||||    
T  1873633 gcccggcccattttgacagctctacct 1873607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 23025259 - 23025136
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  23025259 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 23025160  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  23025159 gcccggcccattttgacagctcta 23025136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 39494055 - 39494179
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    ||||||||| |||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  39494055 ggcttttacaggccgggctaaaaagccctattcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 39494154  T
Q  541 agcccggcccgttttgacagctcta 565  Q
     ||||||||| ||||||||||||||    
T  39494155 ggcccggcccattttgacagctcta 39494179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 35710013 - 35709866
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 518  Q
    |||||||||||| ||||||  | ||||||| ||||||||||||||||||||||  |||||  ||||||||||| ||||||||||||||| | ||||||||    
T  35710013 cgggctagcccgaacgggttgcgggctttttcgggccgggctaaaaagccctgataaaatatgggctgcaatttttaggcccaagccctgcgttttattc 35709914  T
Q  519 gggctttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    |||||||||||| ||||||||  |||   |||||||||||||||||||    
T  35709913 gggctttcgggctggcccatatggcctaacccgttttgacagctctac 35709866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 442 - 566
Target Start/End: Complemental strand, 16526285 - 16526161
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||| ||||||||||||    || |||||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||| |||     
T  16526285 ggcttttacgggccggactaaaaagccctcttcaatttcgggctccaattattcggctcaagccctacattttattcggactttcgggccggcccttacg 16526186  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||||||| |||||||||||||||    
T  16526185 gcccggcccattttgacagctctac 16526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 442 - 535
Target Start/End: Complemental strand, 33604652 - 33604559
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcc 535  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  33604652 ggctttttcgggtcgggctaaaaagccctggaaaaattcgggctacaattattaggcccaagccctacgttttactcggactttcgggccggcc 33604559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 442 - 538
Target Start/End: Original strand, 47381489 - 47381585
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccat 538  Q
    |||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||  ||||||||||||||||    
T  47381489 ggcttttttgggccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagccctacgttttatgcggattttcgggccggcccat 47381585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 41200320 - 41200197
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| ||| |||||||||||| ||||| ||||||||||||||| |||  | ||| || ||||||||||||||| |||||||||||||||||| ||      
T  41200320 ggctttttcggaccgggctaaaaaaccctgaaaaaattcgggctgctatttatcggctcaggccctacattttatttgggctttcgggccggcccgtaag 41200221  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  41200220 gcccggcccattttgacagctcta 41200197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 442 - 538
Target Start/End: Complemental strand, 10993284 - 10993187
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccat 538  Q
    |||||||||||||||||||||||||||||    ||| |||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10993284 ggcttttacgggccgggctaaaaagccctcttcaaatttcgagctccaattattcggcccaagccctacattttattcgggctttcgggccggcccat 10993187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 442 - 566
Target Start/End: Complemental strand, 49112635 - 49112511
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| |||| ||||||||||||||||| ||||||||||||||| |||  | ||| || |||||| ||| ||||||||||||||||||||||| ||      
T  49112635 ggctttttcgggtcgggctaaaaagccctgaaaaaattcgggctgctatttatcggctcaggccctatattatattcgggctttcgggccggcccgtaag 49112536  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||| ||| |||||||||||||||    
T  49112535 gcccgacccattttgacagctctac 49112511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 37471525 - 37471671
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | ||||||||||| |||| | ||||||    
T  37471525 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagtcctata-tttatt 37471622  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||||||||||||| | ||||||||||||||||||||||    
T  37471623 cgggctaaacgggccggcccatacgggccggcccgttttgacagctcta 37471671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 32795824 - 32795678
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||| ||||||||||| | ||||||    
T  32795824 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagacccaagccctata-tttatt 32795727  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||| ||||||||| | ||||||||||||||||||||||    
T  32795726 cgggctaaacgggctggcccatacgggccggcccgttttgacagctcta 32795678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 47761690 - 47761836
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  47761690 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 47761787  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   |||||||| |||||| |  ||||||||||||||| |||||    
T  47761788 cgggctaaacgggccggtccatacgggtcggcccgttttgacatctcta 47761836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 442 - 533
Target Start/End: Original strand, 17511313 - 17511404
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccgg 533  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||| | |||  | |||||| | |||||||||||||| ||||||||||||||    
T  17511313 ggctttttcgggccgggctaaaaaaccctgaaaaaattcgggctactatttatcggcccaggacctacattttattcaggctttcgggccgg 17511404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 442 - 533
Target Start/End: Complemental strand, 17541901 - 17541810
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccgg 533  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||| | |||  | |||||| | |||||||||||||| ||||||||||||||    
T  17541901 ggctttttcgggccgggctaaaaaaccctgaaaaaattcgggctactatttatcggcccaggacctacattttattcaggctttcgggccgg 17541810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 40685635 - 40685759
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggcttt-cgggccggcccata 539  Q
    |||||||| ||| ||||||||||||||||   |||||||||||| |||| | |||||||||||||||| |||| |||||||||   ||||||| ||||||    
T  40685635 ggcttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctatattt-attcgggctaaacgggccgacccata 40685732  T
Q  540 cagcccggcccgttttgacagctctac 566  Q
    | | |||||||||||||||||||||||    
T  40685733 cggaccggcccgttttgacagctctac 40685759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 24764301 - 24764155
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  |||| || | |||||||| ||||||||||||||||||||   ||||||||| |  |||| | |||||||||||||||| |||| |||    
T  24764301 cgggctagccctaacggataccgggcttttaagggccgggctaaaaagccctattaaaattcggaca-caatattttaggcccaagccctatattt-att 24764204  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    | ||||   |||||||||||||||  |||||||||||||||||||||||    
T  24764203 caggctaaacgggccggcccatacgacccggcccgttttgacagctcta 24764155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 47099283 - 47099118
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggc 498  Q
    ||||||||||| ||||   |||||||||||  ||||||| ||||  |||| |||||||||||||||||||||  |||||||||||| |||| | ||||||    
T  47099283 gggctacccgtggcccgttcgggctagccctaacgggtaccaggtatttaagggccgggctaaaaagccctgttaaaattcgggct-caatattttaggc 47099185  T
Q  499 ccaagccctacattttattcgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    | |||||||| | |||||| |||||   |||| ||||| |||| |||||||| ||| |||||||||||    
T  47099184 ctaagccctata-tttatttgggctaaacgggtcggcctatacggcccggcctgttgtgacagctcta 47099118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 33889303 - 33889180
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggcttt-cgggccggcccata 539  Q
    |||||||| ||||||||||||||||| ||   |||||||||||| |||| | |||||||||||||||| ||||| ||||||||   ||||||| ||||||    
T  33889303 ggcttttaagggccgggctaaaaagctctattaaaattcgggct-caatattttaggcccaagccctatatttt-ttcgggctaaacgggccgacccata 33889206  T
Q  540 cagcccggcccgttttgacagctcta 565  Q
    |  || ||||||||||||||||||||    
T  33889205 cgacctggcccgttttgacagctcta 33889180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 474 - 526
Target Start/End: Original strand, 2621481 - 2621533
Alignment:
Q  474 aaaattcgggctgcaattattaggcccaagccctacattttattcgggctttc 526  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  2621481 aaaattcgggctgcaattattaggctcaaaccctacgttttattcgggctttc 2621533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 400 - 523
Target Start/End: Complemental strand, 8613882 - 8613760
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggc 498  Q
    |||||||||| |||||   || ||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | ||||||    
T  8613882 gggctacccgcagcccattcgagctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggc 8613784  T
Q  499 ccaagccctacattttattcgggct 523  Q
    |||||||||| | ||||||||||||    
T  8613783 ccaagccctata-tttattcgggct 8613760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 419 - 567
Target Start/End: Complemental strand, 8781595 - 8781447
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||  || |||||||||||||||||   |||||||||||| ||||  ||| ||||||||||||| | || ||     
T  8781595 cgggctagccctaacgggtagcgggctttttaggaccgggctaaaaagccctattaaaattcgggct-caatatttaaggcccaagccctataattaat- 8781498  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctacc 567  Q
    ||||||   ||||||||||||||  ||||| ||||||||||||||||||||    
T  8781497 cgggctaaacgggccggcccatatggcccgacccgttttgacagctctacc 8781447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 568
Target Start/End: Complemental strand, 30072154 - 30071986
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggc 498  Q
    |||||||||| |||||   |||| ||||||  ||||||||| |||||| | |||| |||||||||||||||   |||||| ||||| |||| | |||||     
T  30072154 gggctacccgcagcccgttcgggttagccctaacgggtaacgggctttaaagggctgggctaaaaagccctattaaaatttgggct-caatattttaggt 30072056  T
Q  499 ccaagccctacattttattcgggcttt-cgggccggcccatacagcccggcccgttttgacagctctacct 568  Q
    |||||||||| |||| ||||||| |   |||||||||||||||  |||| || ||||||||||||||||||    
T  30072055 ccaagccctatattt-attcgggttaaacgggccggcccatacgacccgacctgttttgacagctctacct 30071986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 39560615 - 39560512
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| |  ||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  39560615 cgggctagccctaacgggtaccgagcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 39560518  T
Q  518 cgggct 523  Q
    ||||||    
T  39560517 cgggct 39560512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 37085867 - 37085721
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| ||| |||||| |||||||||||||||| |||   |||||||||||| |||| | |||||||||||| ||| | ||||||    
T  37085867 cgggctagccctaacgggtaccagacttttaagggccgggctaaaaagtcctattaaaattcgggct-caatattttaggcccaagctctata-tttatt 37085770  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    || |||   | ||||  ||||||| | ||||||||||||||||||||||    
T  37085769 cgtgctaaacaggccaacccatacggtccggcccgttttgacagctcta 37085721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 512
Target Start/End: Complemental strand, 4266942 - 4266886
Alignment:
Q  456 gggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacatt 512  Q
    |||||||||||||||| ||||||||||||||| |||  | |||||| ||||||||||    
T  4266942 gggctaaaaagccctgaaaaaattcgggctgctatttatcggcccatgccctacatt 4266886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 33590275 - 33590382
Alignment:
Q  415 ctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacatttt 514  Q
    |||||||||||||||  | ||||| |  ||||||| ||||||||||||||||||||   ||||||||||||  |  | |||||||||||| ||| | |||    
T  33590275 ctaacgggctagccctaatgggtaccgagcttttaagggccgggctaaaaagccctattaaaattcgggctaaatattttaggcccaagctctata-ttt 33590373  T
Q  515 attcgggct 523  Q
    |||||||||    
T  33590374 attcgggct 33590382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 540
Target Start/End: Complemental strand, 3699290 - 3699169
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| || ||||| |||||||||||   |||||||||||| |||| | |||||||||| ||||| | ||||||    
T  3699290 cgggctagccctaacgggtaccgggcttttaaggaccgggttaaaaagccctattaaaattcgggct-caatattttaggcccaaaccctata-tttatt 3699193  T
Q  518 cgggct-ttcgggccggcccatac 540  Q
    |||||| | ||| |||||||||||    
T  3699192 cgggctatacggaccggcccatac 3699169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 513
Target Start/End: Original strand, 17475748 - 17475819
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattt 513  Q
    ||||||| |||| ||||||||||| ||||| ||||||||||||||| |||  | ||| || |||||||||||    
T  17475748 ggctttttcgggtcgggctaaaaaaccctgaaaaaattcgggctgctatttatcggctcaggccctacattt 17475819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 513
Target Start/End: Complemental strand, 17577466 - 17577395
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattt 513  Q
    ||||||| |||| ||||||||||| ||||| ||||||||||||||| |||  | ||| || |||||||||||    
T  17577466 ggctttttcgggtcgggctaaaaaaccctgaaaaaattcgggctgctatttatcggctcaggccctacattt 17577395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 470
Target Start/End: Original strand, 34202662 - 34202713
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccct 470  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||    
T  34202662 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 34202713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 43 - 381
Target Start/End: Complemental strand, 19241235 - 19240913
Alignment:
Q  43 atatggcctggtgattgtgtagttcctggacggtgtgatgttggtttagggagcatgtgttttttgctactgccataggcttctttgttatatgtatact 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19241235 atatggcctggtgattgtgtagttcctggacggtgtgatgttggtttagggagcatgtgttttttgctactgccataggcttctttgttatatgtatact 19241136  T
Q  143 tatcttgtttaatgtcttttggtgaatttttggtgaattgatgccaacattaatttggtggatgtgcagtgagcttcttatgttagattgctactgctat 242  Q
    ||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||      
T  19241135 tatcttgtttaatgtcttttggtg-----------aattgatgccaacattaatttggtggatgtgcagtaagcttcttatgttagattgttactact-- 19241049  T
Q  243 atcagaggcttttgtgttttttcggcttagcttgagtggattgaggccattaataatattagctgtt-nnnnnnnttgtaaaaatgatagagcattaaaa 341  Q
       |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| ||||        || |||||||||| || | ||||||    
T  19241048 ---agaggcttttgtgttttttctgctcagtttgagtggattgaggccattaataatattagttgttaaaaaaaattataaaaatgattgaactttaaaa 19240952  T
Q  342 gccatgccttcaaaaccacaccaaacttaacccacttgta 381  Q
     |||||||||||||||||||||||||||||||||||||||    
T  19240951 -ccatgccttcaaaaccacaccaaacttaacccacttgta 19240913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 44341333 - 44341168
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 499  Q
    ||||| ||| |||||| |||||||||||||| | |||| || ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||    
T  44341333 gggctgcccttagcccaaacgggctagcccgaaagggttacgggcttttacgggccgggctaaaaagccctggaagaatccggactgcaattattcggcc 44341234  T
Q  500 caagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||    
T  44341233 caagccctacattttattcgggctttcggaccggcccgtatggcccggcccgttttgacagctcta 44341168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 417 - 566
Target Start/End: Complemental strand, 19240892 - 19240743
Alignment:
Q  417 aacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttat 516  Q
    |||||||||||||||||||||||| |  |||||| || |||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  19240892 aacgggctagcccggacgggtaacggatttttacaggtcgggctaaaatgccctgaaaaaattcgggctgcaattattaggcccaaaccctacattttat 19240793  T
Q  517 tcgggctttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||||||||||||| |||||   ||||||||||||||||||||||||    
T  19240792 tcgggctttcgggccggtccatatgacccggcccgttttgacagctctac 19240743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 400 - 536
Target Start/End: Complemental strand, 32767721 - 32767585
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 499  Q
    ||||| ||||| |||| ||||||||||||   ||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32767721 gggctgcccgtggcccgaacgggctagccttaacgggttccgggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 32767622  T
Q  500 caagccctacattttattcgggctttcgggccggccc 536  Q
    ||||||||| |||||||||||||||||||||||||||    
T  32767621 caagccctatattttattcgggctttcgggccggccc 32767585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 442 - 566
Target Start/End: Complemental strand, 27870120 - 27869996
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  27870120 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattatttggcccaagccctacattttattcgggctttcgggccggcccttacg 27870021  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||||||| |||||||||||||||    
T  27870020 gcccggcccattttgacagctctac 27869996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 20034307 - 20034430
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  20034307 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 20034406  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  20034407 gcccggcccattttgacagctcta 20034430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 17543846 - 17543722
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  17543846 ggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 17543747  T
Q  541 agcccggcccgttttgacagctcta 565  Q
     ||||||||| ||||||||||||||    
T  17543746 ggcccggcccattttgacagctcta 17543722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 566
Target Start/End: Complemental strand, 32594141 - 32594017
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| |||| |||| |||||||||||| |||||||||||||||||||||| || ||| | |||||||||||||||||||||||||||||||| |||     
T  32594141 ggctttttcgggtcgggttaaaaagccctgaaaaaattcgggctgcaattattcggtccaggtcctacattttattcgggctttcgggccggcccgtacg 32594042  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||||||| |||||||||||||||    
T  32594041 gcccggcccattttgacagctctac 32594017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 39345930 - 39345806
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  39345930 ggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 39345831  T
Q  541 agcccggcccgttttgacagctcta 565  Q
     ||||||||| ||||||||||||||    
T  39345830 ggcccggcccattttgacagctcta 39345806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 47295662 - 47295539
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| || |||||||||||||||||||||||||||||||||||||| |||     
T  47295662 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggtccaagccctacattttattcgggctttcgggccggcccttacg 47295563  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  47295562 gcccggcccattttgacagctcta 47295539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 442 - 536
Target Start/End: Original strand, 43286271 - 43286365
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  43286271 ggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcgggctctcgggccagccc 43286365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 442 - 567
Target Start/End: Complemental strand, 45522598 - 45522473
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||| ||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  45522598 ggcttttacgggccgggctaaaaagctctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 45522499  T
Q  542 gcccggcccgttttgacagctctacc 567  Q
    ||||| ||| ||||||||||||||||    
T  45522498 gcccgacccattttgacagctctacc 45522473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 425 - 565
Target Start/End: Complemental strand, 951488 - 951348
Alignment:
Q  425 agcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctt 524  Q
    ||||||||||||  |  |||||||||||||||||||||||||||||    || |||||||| || ||||| |||||||||| ||||||||||||||||||    
T  951488 agcccggacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccacttattcggcccaagccttacattttattcgggctt 951389  T
Q  525 tcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||||||||| ||| ||||||||| ||||||||||||||    
T  951388 tcgggccggcccttacggcccggcccattttgacagctcta 951348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 454 - 538
Target Start/End: Original strand, 3415234 - 3415318
Alignment:
Q  454 ccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccat 538  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3415234 ccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagccctacgttttattcgggctttcgggccggcccat 3415318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 54134501 - 54134624
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || || ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| |||     
T  54134501 ggcttttacgggccgggctaaaaagccctcttcaattttgggctccaattattcggcccaagccctacattttattcgggctttcgggccgacccttacg 54134600  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  54134601 gcccggcccattttgacagctcta 54134624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 443 - 564
Target Start/End: Original strand, 1705217 - 1705337
Alignment:
Q  443 gcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacag 542  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||  |||| |||||||||||||||||||||||||||| ||| |    
T  1705217 gctttttcgggccgggctaaaaagccctg-aaaaattcgggctgctattatttggcccagaccctgcattttattcgggctttcgggccggcccgtacgg 1705315  T
Q  543 cccggcccgttttgacagctct 564  Q
    |||| ||| |||||||||||||    
T  1705316 cccgacccattttgacagctct 1705337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 2323805 - 2323928
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||| | |||| || |||     
T  2323805 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcagcccggtccttacg 2323904  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  2323905 gcccggcccattttgacagctcta 2323928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 442 - 536
Target Start/End: Original strand, 52464105 - 52464199
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    ||||||| || ||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52464105 ggctttttcgagccgggctaaaaagctcttgaaaaattcgggctgtaattattaggcccaagccctacgttttattcgggctttcgggccggccc 52464199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 456 - 566
Target Start/End: Complemental strand, 41361341 - 41361231
Alignment:
Q  456 gggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccgtttt 555  Q
    ||||||||||||||||  ||||| |||||||||||| ||||||||||||| | | ||||||||||||||||||||||||||||| || |  |||||||||    
T  41361341 gggctaaaaagccctgctaaaatacgggctgcaatttttaggcccaagccatgcgttttattcgggctttcgggccggcccatataggctagcccgtttt 41361242  T
Q  556 gacagctctac 566  Q
    |||||||||||    
T  41361241 gacagctctac 41361231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 9455304 - 9455469
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 499  Q
    ||||| |||||||||| ||| ||| |||||  |||||  || | ||||| ||||||  |||||||||||||| ||||||||||||||||||||||  | |    
T  9455304 gggctgcccgtagcccgaactggccagccctaacgggctacggcctttttcgggcccagctaaaaagccctgaaaaaattcgggctgcaattattcagtc 9455403  T
Q  500 caagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||  ||||||||||||||||||||||||| ||||||| ||  | ||||||| ||||||||||||||    
T  9455404 cagtccctacattttattcgggctttcggaccggcccgtattgtccggcccattttgacagctcta 9455469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 442 - 566
Target Start/End: Complemental strand, 34030394 - 34030271
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||| |||||||||||   |||||| |||||| ||| ||||||||||||||||| |||| |||||||||||||| |||||| |||     
T  34030394 ggcttttacgggccgggccaaaaagccctgtttaaattcaggctgccatttttaggcccaagccctacgtttt-ttcgggctttcgggtcggcccgtacg 34030296  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    | |||||| ||||||||||||||||    
T  34030295 gaccggcctgttttgacagctctac 34030271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 56264413 - 56264559
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  56264413 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 56264510  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||||||||||||| | ||||||||||||||||||||||    
T  56264511 cgggctaaacgggccggcccatacgggccggcccgttttgacagctcta 56264559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 447 - 568
Target Start/End: Original strand, 1324942 - 1325065
Alignment:
Q  447 ttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccg 546  Q
    |||||||| ||||||||||||||||||||||||||||||  |||| ||  ||||||||| |||||||||||||| ||||||| |||| |||||  | |||    
T  1324942 ttacgggctgggctaaaaagccctggaaaaattcgggctctaatttttcagcccaagccttacattttattcggactttcggtccggtccatatggtccg 1325041  T
Q  547 gcc--cgttttgacagctctacct 568  Q
    |||  |||||||||||||| ||||    
T  1325042 gccctcgttttgacagctccacct 1325065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 442 - 562
Target Start/End: Original strand, 34859069 - 34859189
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||  ||||||||||||||||||||| |||||||| |||| | |||||| |||||| ||||| ||||||||||||| |||||| ||| ||| |||     
T  34859069 ggcttttttgggccgggctaaaaagccctgaaaaaattcaggcttctattattcggcccaggccctgcattttattcgggttttcggaccgacccgtacg 34859168  T
Q  542 gcccggcccgttttgacagct 562  Q
    ||||||||  |||||||||||    
T  34859169 gcccggcctattttgacagct 34859189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 423 - 566
Target Start/End: Original strand, 40731215 - 40731358
Alignment:
Q  423 ctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcggg 521  Q
    |||||||  ||||||||| |||||||| ||||||||||||||||||||   ||||| |||||| |||| | |||||||||||||||| | ||||||||||    
T  40731215 ctagccctaacgggtaacgggcttttaagggccgggctaaaaagccctattaaaatccgggct-caatattttaggcccaagccctata-tttattcggg 40731312  T
Q  522 ct-ttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||   |||| |||||||||| | |||||||||||||||||||||||    
T  40731313 ctaaacgggtcggcccatacgggccggcccgttttgacagctctac 40731358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 401367 - 401514
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| |||||| |||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  401367 cgggctagccctaacgggtaccgggcttttaagggccgagctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 401464  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||   ||||||||||||||| | ||||||  |||||||||||||||    
T  401465 cgggctaaacgggccggcccatacgggccggcctattttgacagctctac 401514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 19823653 - 19823799
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||| ||||||||||||   |||||||| ||| |||| | |||| ||||||||||| |||| |||    
T  19823653 cgggctagccctaacgggtaccgggcttttaagggccggtctaaaaagccctattaaaattcgtgct-caatattttagacccaagccctatattt-att 19823750  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||||||||||| | ||||||||||||||||||||||||    
T  19823751 cgggctaaacgggccggcccattcggcccggcccgttttgacagctcta 19823799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 53925452 - 53925306
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |  ||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| ||||| ||    
T  53925452 cgggctagccctaacgggtaccggatttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctatatttt-tt 53925355  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||| ||||||||||| |||||||||||||||| |||||||    
T  53925354 cgggctaaacggaccggcccatacggcccggcccgttttgatagctcta 53925306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 445 - 538
Target Start/End: Original strand, 51401354 - 51401447
Alignment:
Q  445 ttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccat 538  Q
    |||| |||||||||||||||||| |||||||||||||||||| |||| ||  |||||| |||||  ||||| |||||||  |||||||||||||    
T  51401354 tttttcgggccgggctaaaaagctctggaaaaattcgggctggaatttttgagcccaaaccctaagttttactcgggctaacgggccggcccat 51401447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 53724950 - 53724827
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct-ttcgggccggcccata 539  Q
    |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||||||||   |||| |||||||||    
T  53724950 ggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttattcgggctaaacgggtcggcccata 53724853  T
Q  540 cagcccggcccgttttgacagctcta 565  Q
    |||  || ||||||||||||||||||    
T  53724852 caggtcgacccgttttgacagctcta 53724827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 468 - 565
Target Start/End: Original strand, 54787555 - 54787652
Alignment:
Q  468 cctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||| ||||||||||||||||||||  ||| |||| || ||| ||||||| ||| |||||||||||||| ||| |||| |||| |||||||| |||||    
T  54787555 cctgaaaaaattcgggctgcaattaaaaggtccaaaccatacgttttattagggttttcgggccggcccgtacggcccagcccattttgacaactcta 54787652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 419 - 513
Target Start/End: Complemental strand, 15194589 - 15194495
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattt 513  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| ||||    
T  15194589 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctatattt 15194495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 443 - 559
Target Start/End: Original strand, 1139022 - 1139138
Alignment:
Q  443 gcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggcttt-cgggccggcccatac 540  Q
    ||||||| ||||||||||||||||||||   |||||| ||||| |||| | ||||||||| |||||| |||| |||||||||   |||||||||||||||    
T  1139022 gcttttaagggccgggctaaaaagccctattaaaatttgggct-caatattttaggcccaggccctatattt-attcgggctaaacgggccggcccatac 1139119  T
Q  541 agcccggcccgttttgaca 559  Q
     | ||||||||||||||||    
T  1139120 gggccggcccgttttgaca 1139138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 26706917 - 26707020
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| |||||||||||||||||| |   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  26706917 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccatattaaaattcgggct-caatattttaggcccaagccctata-tttatt 26707014  T
Q  518 cgggct 523  Q
    ||||||    
T  26707015 cgggct 26707020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 35666693 - 35666590
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| |||||||| |||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  35666693 cgggctagccctaacgggtaccgggcttttaagggccggggtaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 35666596  T
Q  518 cgggct 523  Q
    ||||||    
T  35666595 cgggct 35666590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 6643303 - 6643449
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||| ||||   |||||||||||| |||| | |||||||||| ||||| | ||||||    
T  6643303 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgggct-caatattttaggcccaaaccctata-tttatt 6643400  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||| |||||||||||   ||||||| |||||||| |||||    
T  6643401 cgggctaaacggaccggcccatacgaaccggcccattttgacaactcta 6643449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 30000358 - 30000213
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| |||||||||| |||| ||||||||||| |||   |||||| ||||| |||| | |||||||||||||||| | ||||||    
T  30000358 cgggctagccctaacgggtaccaggcttttaagggctgggctaaaaaggcctattaaaatttgggct-caatattttaggcccaagccctata-tttatt 30000261  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   |||||| |||| ||  | ||||||||||||||||||||||    
T  30000260 cgggctaaacgggcc-gcccgtatgggccggcccgttttgacagctcta 30000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 454 - 566
Target Start/End: Complemental strand, 48152793 - 48152681
Alignment:
Q  454 ccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggcttt-cgggccggcccatacagcccggcccg 551  Q
    |||||||||||| ||||   |||||||||||| |||| | |||||||||||||||| |||| |||||||||   |||| |||||||| | | ||||||||    
T  48152793 ccgggctaaaaaaccctattaaaattcgggct-caatattttaggcccaagccctatattt-attcgggctaaacgggtcggcccatccgggccggcccg 48152696  T
Q  552 ttttgacagctctac 566  Q
    |||||||||||||||    
T  48152695 ttttgacagctctac 48152681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 513
Target Start/End: Original strand, 54093977 - 54094090
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggc 498  Q
    |||||||||| |||||   |||||||||||  ||||||| | | |||||| ||||||||||||||||||||   |||||||||||| |||| | ||| ||    
T  54093977 gggctacccgcagcccattcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaagc 54094075  T
Q  499 ccaagccctacattt 513  Q
    |||||||||| ||||    
T  54094076 ccaagccctatattt 54094090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 7138482 - 7138587
Alignment:
Q  445 ttttacgggccgggctaaaaagccctgga-aaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagc 543  Q
    ||||||| || |||||||||||||||    |||||| |||||||||||||| ||||||| || ||||||||| |||| |||||||  |||||| ||| |     
T  7138482 ttttacgagcagggctaaaaagccctcttcaaaatttgggctgcaattattcggcccaaaccttacattttaatcggactttcggatcggcccgtacggt 7138581  T
Q  544 ccggcc 549  Q
    ||||||    
T  7138582 ccggcc 7138587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 19521773 - 19521920
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| || | ||||||||||||||    |||||||||||| |||| | |||||||||| ||||| |||| |||    
T  19521773 cgggctagccctaacgggtatcgggcttttaaggactgggctaaaaagccccattaaaattcgggct-caatattttaggcccaaaccctatattt-att 19521870  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||| ||   ||||||||| ||||| | ||| |||||||||||||||||||    
T  19521871 cggactaaacgggccggctcatacggaccgacccgttttgacagctctac 19521920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 39240434 - 39240537
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    ||||||||| |  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | ||||||| |||||||| | ||||||    
T  39240434 cgggctagctctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcctaagccctata-tttatt 39240531  T
Q  518 cgggct 523  Q
    ||||||    
T  39240532 cgggct 39240537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 50097505 - 50097402
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| ||| |||||| ||||||||||||||||||||   ||||||||| || |||| | |||||||||| ||||| | ||||||    
T  50097505 cgggctagccctaacgggtaccagacttttaagggccgggctaaaaagcccttttaaaattcggact-caatattttaggcccaaaccctata-tttatt 50097408  T
Q  518 cgggct 523  Q
    ||||||    
T  50097407 cgggct 50097402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 51435584 - 51435687
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    ||||||||||   ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||| ||| | ||||||    
T  51435584 cgggctagccttaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagctctata-tttatt 51435681  T
Q  518 cgggct 523  Q
    ||||||    
T  51435682 cgggct 51435687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 535
Target Start/End: Complemental strand, 50004818 - 50004741
Alignment:
Q  457 ggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttattcgggctttcgggccggcc 535  Q
    |||||||||||||||  |||||||||||||| ||| ||  |||||| ||||||||||| |||| ||||| ||||||||||    
T  50004818 ggctaaaaagccctg--aaaattcgggctgctattttttcggcccaggccctacatttaattcaggcttccgggccggcc 50004741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 565
Target Start/End: Complemental strand, 6366362 - 6366323
Alignment:
Q  526 cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  6366362 cgggccggcccatacagcccggctcattttgacagctcta 6366323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 565
Target Start/End: Complemental strand, 16029783 - 16029724
Alignment:
Q  506 ctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||||||||||||||||| ||||| ||  ||||| | | ||||||||||||||    
T  16029783 ctacattttattcgggctttcgggctggcccgtaaggcccgactcattttgacagctcta 16029724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 513
Target Start/End: Complemental strand, 16623572 - 16623478
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattt 513  Q
    |||||||||||  ||||||| | |||||||  ||||||||||||||||||||   |||||||||||| |||| | | |||||||||||||| ||||    
T  16623572 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcgggct-caatatttaaggcccaagccctatattt 16623478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 470
Target Start/End: Original strand, 44871520 - 44871571
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccct 470  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  44871520 cgggctagccctaacgggtagcaggctttttagggccgggctaaaaagccct 44871571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 51204241 - 51204280
Alignment:
Q  270 tagcttgagtggattgaggccattaataatattagctgtt 309  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  51204241 tagcttgagtagattgaggccattaataatattcgctgtt 51204280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 442 - 523
Target Start/End: Original strand, 39809651 - 39809731
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct 523  Q
    |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||| ||||||||| | ||||||||||||    
T  39809651 ggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggctcaagccctata-tttattcgggct 39809731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 487
Target Start/End: Complemental strand, 16029828 - 16029783
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgc 487  Q
    |||||||  ||||||||||||||||||||| |||||||| ||||||    
T  16029828 ggcttttttgggccgggctaaaaagccctgaaaaaattcaggctgc 16029783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 32555681 - 32555640
Alignment:
Q  526 cgggccggcccatacagcccggcccgttttgacagctctacc 567  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||    
T  32555681 cgggctggcccatacggcccgacccgttttgacagctctacc 32555640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 35392858 - 35392755
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| |||||||| ||||||| |||   |||||||||||| |||| | |||||||||| ||||| | ||||||    
T  35392858 cgggctagccctaacgggtaccgggcttttaagggccgggttaaaaagtcctattaaaattcgggct-caatattttaggcccaaaccctata-tttatt 35392761  T
Q  518 cgggct 523  Q
    ||||||    
T  35392760 cgggct 35392755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 6e-73; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 62 - 251
Target Start/End: Original strand, 27966371 - 27966549
Alignment:
Q  62 tagttcctggacggtgtgatgttggtttagggagcatgtgttttttgctactgccataggcttctttgttatatgtatacttatcttgtttaatgtcttt 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  27966371 tagttcctggacggtgtgatgttggtttagggagcatgtgttttttgctactgccataggcttctttgttatatgtatacttatcttgtttaatgtc--- 27966467  T
Q  162 tggtgaatttttggtgaattgatgccaacattaatttggtggatgtgcagtgagcttcttatgttagattgctactgctatatcagaggc 251  Q
            ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  27966468 --------ttttggtgaattgatgccaacattaatttggtggatgtgcactaagcttcttatgttagattgctattgctatatcagaggc 27966549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 20139311 - 20139188
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  20139311 ggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcgggctttcgggccggcccatacg 20139212  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    | | ||||||||||||||||||||    
T  20139211 ggcgggcccgttttgacagctcta 20139188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 22193558 - 22193681
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  22193558 ggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcgggctttcgggccggcccatacg 22193657  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    | | ||||||||||||||||||||    
T  22193658 ggcgggcccgttttgacagctcta 22193681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 204 - 381
Target Start/End: Original strand, 27966550 - 27966722
Alignment:
Q  204 atgtgcagtgagcttcttatgttagattgctactgctatatcagaggcttttgtgttttttcggcttagcttgagtggattgaggccattaataatatta 303  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||||||||||||||||||||    
T  27966550 atgtgcagtaagcttcttatgttagattgctactgctatatcagaggcttttgtgtt------gctcagcttgagtggattgaggccattaataatatta 27966643  T
Q  304 gctgtt-nnnnnnnttgtaaaaatgatagagcattaaaagccatgccttcaaaaccacaccaaacttaacccacttgta 381  Q
    | ||||        |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||    
T  27966644 gttgttaaaaaaaattgtaaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgta 27966722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 27966740 - 27966886
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 518  Q
    |||||||||  ||||||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  27966740 cgggctagcatggacgggtaatgggcttttatgggccgggctaaaaagccctggaaaaatttgggctgcaattattaggcccaagccctacattttactc 27966839  T
Q  519 gggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||||||||||| || | ||| ||||||||||||||||||    
T  27966840 gggctttcgggccggcccacacggtccgacccgttttgacagctcta 27966886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 400 - 536
Target Start/End: Original strand, 31472456 - 31472592
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 499  Q
    ||||| ||||| |||| ||||||||||||   |||||   | ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  31472456 gggctgcccgtggcccgaacgggctagccataacgggctcctggctttttcgggcctggctaaaaagccctagaaaaattcgggctgcaattattaggcc 31472555  T
Q  500 caagccctacattttattcgggctttcgggccggccc 536  Q
    |||||||||| ||||||||||||||||||||||||||    
T  31472556 caagccctacgttttattcgggctttcgggccggccc 31472592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 15066024 - 15065901
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  15066024 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 15065925  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||| | ||||||||||||||    
T  15065924 gcccggctcattttgacagctcta 15065901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 450 - 565
Target Start/End: Original strand, 12272226 - 12272341
Alignment:
Q  450 cgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcc 549  Q
    |||||||||||||||||||||| ||||||||||||||| |||  | |||||| |||||||||||||||||||||||||||||||||| ||  ||||||||    
T  12272226 cgggccgggctaaaaagccctgaaaaaattcgggctgctatttatcggcccaggccctacattttattcgggctttcgggccggcccgtaaggcccggcc 12272325  T
Q  550 cgttttgacagctcta 565  Q
    | ||||||||||||||    
T  12272326 cattttgacagctcta 12272341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 10997837 - 10997714
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| |||||||||||| ||||||||||||||||||||| |||||| |||     
T  10997837 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctccattttattcgggctttcgggtcggcccttacg 10997738  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||| ||| ||||||||||||||    
T  10997737 gcccgacccattttgacagctcta 10997714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 425 - 567
Target Start/End: Original strand, 31655523 - 31655665
Alignment:
Q  425 agcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctt 524  Q
    |||||| ||||| ||| ||||||| ||| |||||||||||||||| | |   |||||||||| |||| |||||||||| |||||  ||||||||||||||    
T  31655523 agcccgaacgggcaacgggctttttcggaccgggctaaaaagcccggaatttattcgggctgtaatttttaggcccaaaccctatgttttattcgggctt 31655622  T
Q  525 tcgggccggcccatacagcccggcccgttttgacagctctacc 567  Q
    |||||| ||||||| | ||||||||||||||||||||||||||    
T  31655623 tcgggctggcccattcggcccggcccgttttgacagctctacc 31655665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 11369588 - 11369712
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||| | ||||||||||||||||||||||||| | ||| |||    
T  11369588 ggcttttacgggccgggctaaaaagccctctttaaatttcgggctccaattattcggcccaaactctacattttattcgggctttcgggctgacccttac 11369687  T
Q  541 agcccggcccgttttgacagctcta 565  Q
     ||||||||| ||||||||||||||    
T  11369688 ggcccggcccattttgacagctcta 11369712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 432 - 565
Target Start/End: Complemental strand, 34178536 - 34178403
Alignment:
Q  432 acgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggcttt-cggg 529  Q
    ||||||| |||||||||| ||||||||||||||||||||   |||||| ||||| |||| | |||||||||||||||| |||| |||||||||   ||||    
T  34178536 acgggtaccaggcttttaagggccgggctaaaaagccctattaaaatttgggct-caatattttaggcccaagccctatattt-attcgggctaaacggg 34178439  T
Q  530 ccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||| ||||| ||||||||||||||||||    
T  34178438 ccggcccatacggcccgacccgttttgacagctcta 34178403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 450 - 528
Target Start/End: Complemental strand, 3044368 - 3044290
Alignment:
Q  450 cgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgg 528  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||| |||||| ||||| ||||||||||||||||||||    
T  3044368 cgggccgggctaaaaaaccctgaaaaaattcgggctgctattattcggcccaggccctgcattttattcgggctttcgg 3044290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 442 - 559
Target Start/End: Original strand, 32465659 - 32465776
Alignment:
Q  442 ggcttttacgggccggg-ctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    ||||||||||||||||| | |||||||||||   ||||||||| ||| ||| |||||||||||||||||||||| |||||||||||||| |||||| |||    
T  32465659 ggcttttacgggccgggtcaaaaaagccctgtttaaattcgggttgccatttttaggcccaagccctacatttt-ttcgggctttcgggtcggcccgtac 32465757  T
Q  541 agcccggcccgttttgaca 559  Q
     | |||||| |||||||||    
T  32465758 ggaccggcctgttttgaca 32465776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 2702997 - 2703143
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  |||||||   |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  2702997 cgggctagccctaacgggtactgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 2703094  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||    |||||||||||||| | ||||||||||||||||||||||    
T  2703095 cgggctaaatgggccggcccatacgggccggcccgttttgacagctcta 2703143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 17547608 - 17547462
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| |||||||||||||||| |||   |||||||||||| |||| | |||||||||||| ||| |||| |||    
T  17547608 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagtcctattaaaattcgggct-caatattttaggcccaagctctatattt-att 17547511  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||||||||||||| | ||||||||||||||||||||||    
T  17547510 cgggctaaacgggccggcccatacgggccggcccgttttgacagctcta 17547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 27966049 - 27966099
Alignment:
Q  10 aatcacttgctactgtcatggtaggccgctgctatatggcctggtgattgt 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27966049 aatcacttgctactgtcatggtaggccgctgctatatggcctggtgattgt 27966099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 419 - 563
Target Start/End: Original strand, 29641046 - 29641190
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||| ||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  29641046 cgggatagccctaacgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 29641143  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctc 563  Q
    ||||||   |||| |||||||||| | ||||||||||||||||||||    
T  29641144 cgggctaaacgggtcggcccatacgggccggcccgttttgacagctc 29641190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 432 - 563
Target Start/End: Original strand, 31511238 - 31511369
Alignment:
Q  432 acgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct-ttcggg 529  Q
    ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||||||||   ||||    
T  31511238 acgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttattcgggctaaacggg 31511335  T
Q  530 ccggcccatacagcccggcccgttttgacagctc 563  Q
     |||||||||| | ||||||||||||||||||||    
T  31511336 tcggcccatacgggccggcccgttttgacagctc 31511369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 398 - 564
Target Start/End: Original strand, 15183726 - 15183892
Alignment:
Q  398 cggggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattag 496  Q
    ||||||||||||  ||||   |||||||||||  ||||| | | ||||||||  |||||||||||||||||||   |||||||||||| |||| | ||||    
T  15183726 cggggctacccgcggcccgttcgggctagccctaacgggaaccgggcttttaaaggccgggctaaaaagccctattaaaattcgggct-caatattttag 15183824  T
Q  497 gcccaagccctacattttattcgggcttt-cgggccggcccatacagcccggcccgttttgacagctct 564  Q
    |||||||||||| |||| |||| |||    ||||||||||||||| |||||||||||||||||||||||    
T  15183825 gcccaagccctatattt-attctggcaaaacgggccggcccatacggcccggcccgttttgacagctct 15183892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 442 - 530
Target Start/End: Original strand, 12076652 - 12076739
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggc 530  Q
    ||||||| ||||||||| |||||||||||| ||||||| ||||||| |||  | || ||| ||||||||||||||||||||||||||||    
T  12076652 ggctttttcgggccgggttaaaaagccctgaaaaaatttgggctgctatttatcgg-ccaggccctacattttattcgggctttcgggc 12076739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 2067254 - 2067151
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  2067254 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 2067157  T
Q  518 cgggct 523  Q
    ||||||    
T  2067156 cgggct 2067151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 432 - 565
Target Start/End: Original strand, 15068034 - 15068167
Alignment:
Q  432 acgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct-ttcggg 529  Q
    ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||| ||||||||| | ||||||| ||||   ||||    
T  15068034 acgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcacaagccctata-tttattcaggctaaacggg 15068131  T
Q  530 ccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||| ||||||| | |||| |||||||||||||||||    
T  15068132 ccgacccatacgggccggtccgttttgacagctcta 15068167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 517
Target Start/End: Original strand, 17869273 - 17869348
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttatt 517  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||| |||| ||  ||||||||||||  |||||||    
T  17869273 ggctttttcgggccgggctaaaaaaccctgaaaaaattcgggctggaattttttagcccaagccctaagttttatt 17869348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 26555218 - 26555368
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    ||||||| |||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  26555218 cgggctaaccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 26555315  T
Q  518 cgggct-ttcgggccggcccata----cagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||| ||||||||    | | ||||||||||||||||||||||    
T  26555316 cgggctaaacgggctggcccatatgggccgtccggcccgttttgacagctcta 26555368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 4170937 - 4171038
Alignment:
Q  421 ggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcg 519  Q
    |||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||| ||||| | ||||||||    
T  4170937 ggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaaaccctata-tttattcg 4171034  T
Q  520 ggct 523  Q
    ||||    
T  4171035 ggct 4171038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 450 - 517
Target Start/End: Original strand, 17879033 - 17879100
Alignment:
Q  450 cgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttatt 517  Q
    |||||| ||||||||||||||| |||||||||||||| |||| ||  ||||||||||||  |||||||    
T  17879033 cgggccaggctaaaaagccctgaaaaaattcgggctggaattttttagcccaagccctaagttttatt 17879100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 573
Target Start/End: Original strand, 10233678 - 10233764
Alignment:
Q  487 caattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctctacctgctgt 573  Q
    ||||| ||| ||||||||||||  ||||||||| |||||| | ||||| |||||||    |||||||||||||||| ||||||||||    
T  10233678 caatttttaagcccaagccctatgttttattcgagctttcagaccggctcatacaggttagcccgttttgacagctttacctgctgt 10233764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 513
Target Start/End: Original strand, 9035100 - 9035194
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattt 513  Q
    |||| ||||||  ||||||| | |||||||| |||||| |||||||||||||   |||||||||||| |||| | |||||||||||||||| ||||    
T  9035100 cgggatagccctaacgggtaccgggcttttaagggccgtgctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctatattt 9035194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 470
Target Start/End: Original strand, 22988171 - 22988222
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccct 470  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||    
T  22988171 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 22988222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 470
Target Start/End: Complemental strand, 23800225 - 23800174
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccct 470  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||    
T  23800225 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 23800174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 485
Target Start/End: Original strand, 12577324 - 12577390
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    |||||||||||  ||||||| |||||||||  |||| |||||||||||||||   ||||||||||||    
T  12577324 cgggctagccctaacgggtaccaggctttttagggctgggctaaaaagccctattaaaattcgggct 12577390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 6e-45; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 394 - 566
Target Start/End: Original strand, 37205997 - 37206169
Alignment:
Q  394 gctgcggggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattat 493  Q
    ||||| ||||||||||| ||||  |||||  ||||||| ||||  || ||||||||||||||| |||||||||||||  ||||| ||||| ||||||| |    
T  37205997 gctgccgggctacccgtggcccgtacgggtaagcccggtcgggctacgggcttttacgggccgagctaaaaagccctaaaaaaaatcgggttgcaatttt 37206096  T
Q  494 taggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  37206097 taggcccaagccctacgttttattcgggctttcgggccggcctatacgggccggcccgttttgacagctctac 37206169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 411 - 566
Target Start/End: Original strand, 35038728 - 35038883
Alignment:
Q  411 agccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctaca 510  Q
    ||||| |||||||||||||  |||||  |  |||||||||||||||||||||||||||||    || |||||||| |||||||| |||||||||||||||    
T  35038728 agcccgaacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctaca 35038827  T
Q  511 ttttattcgggctttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  35038828 ttttattcgggctttcgggccggcccttacggcccggcccattttgacagctctac 35038883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 6955798 - 6955922
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  6955798 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 6955897  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||||||| |||||||||||||||    
T  6955898 gcccggcccattttgacagctctac 6955922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 443 - 565
Target Start/End: Original strand, 10642053 - 10642175
Alignment:
Q  443 gcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacag 542  Q
    ||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |    
T  10642053 gcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacgg 10642152  T
Q  543 cccggcccgttttgacagctcta 565  Q
    |||||||| ||||||||||||||    
T  10642153 cccggcccattttgacagctcta 10642175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 6238280 - 6238156
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  6238280 ggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 6238181  T
Q  541 agcccggcccgttttgacagctcta 565  Q
     ||||||||| ||||||||||||||    
T  6238180 ggcccggcccattttgacagctcta 6238156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 6899990 - 6899866
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  6899990 ggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 6899891  T
Q  541 agcccggcccgttttgacagctcta 565  Q
     ||||||||| ||||||||||||||    
T  6899890 ggcccggcccattttgacagctcta 6899866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 35838205 - 35838081
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  35838205 ggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 35838106  T
Q  541 agcccggcccgttttgacagctcta 565  Q
     ||||||||| ||||||||||||||    
T  35838105 ggcccggcccattttgacagctcta 35838081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 38356032 - 38356156
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  38356032 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 38356131  T
Q  542 gcccggcccgttttgacagctctac 566  Q
     |||||||| |||||||||||||||    
T  38356132 acccggcccattttgacagctctac 38356156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 21731811 - 21731688
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||     
T  21731811 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcggcccggcccttacg 21731712  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  21731711 gcccggcccattttgacagctcta 21731688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 406 - 536
Target Start/End: Original strand, 38976219 - 38976349
Alignment:
Q  406 cccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagcc 505  Q
    ||||| |||| || ||||||||||  |||||  || ||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  38976219 cccgtggcccaaatgggctagccctaacgggctacgggctttttcgggccgggctaaaaagcctttggaaaattcgggctgcaattattaggcccaagcc 38976318  T
Q  506 ctacattttattcgggctttcgggccggccc 536  Q
    |||| ||||||||||||||||||||||||||    
T  38976319 ctacgttttattcgggctttcgggccggccc 38976349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 442 - 566
Target Start/End: Complemental strand, 24477381 - 24477256
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||    
T  24477381 ggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaattattcggctcaagccctacattttattcgggctttcgggccggcccttac 24477282  T
Q  541 agcccggcccgttttgacagctctac 566  Q
     ||||||||| |||||||||||||||    
T  24477281 ggcccggcccattttgacagctctac 24477256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 442 - 567
Target Start/End: Original strand, 4699936 - 4700062
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  4699936 ggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaattattcggcccaaaccctacattttattcgggctttcgggccggcccttac 4700035  T
Q  541 agcccggcccgttttgacagctctacc 567  Q
     ||||||||| ||||||||||| ||||    
T  4700036 ggcccggcccattttgacagctttacc 4700062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 42860322 - 42860445
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||||||||| |||||||||| ||||    || |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||     
T  42860322 ggcttttacgggctgggctaaaaaaccctcttcaatttcgggctccaattattcggcccaaaccctacattttattcgggctttcgggccggcccttacg 42860421  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  42860422 gcccggcccattttgacagctcta 42860445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 20338515 - 20338639
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| ||| |||||||||||| ||||| ||||||||||||||| |||  | |||| | |||||||||||||||||| ||||||||||||||| || |    
T  20338515 ggctttttcggaccgggctaaaaatccctgaaaaaattcgggctgctatttatcggcctaggccctacattttattcggactttcgggccggcccgtaaa 20338614  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||||||| |||||||||||||||    
T  20338615 gcccggcccattttgacagctctac 20338639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 424 - 538
Target Start/End: Original strand, 33908117 - 33908231
Alignment:
Q  424 tagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggct 523  Q
    ||||||| |||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||||| || |||||| |||||   |||||||||||||    
T  33908117 tagcccgaacgggttacgggcttttacgggccgggctaaaaagccctagaaaaattcgggctccaatttttcggcccaggccctgtgttttattcgggct 33908216  T
Q  524 ttcgggccggcccat 538  Q
    ||||| |||||||||    
T  33908217 ttcggaccggcccat 33908231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 442 - 538
Target Start/End: Complemental strand, 9996337 - 9996241
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccat 538  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  9996337 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcggcccggcccat 9996241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 408 - 526
Target Start/End: Complemental strand, 31230384 - 31230266
Alignment:
Q  408 cgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccct 507  Q
    |||||||| |||||||| ||||| || ||| || || ||||||||||||||||||||||||||||||||||||||||| ||  | || |||||| |||||    
T  31230384 cgtagcccgaacgggctggcccgaactggttacgggattttacgggccgggctaaaaagccctggaaaaattcgggctccagcttttcggcccaggccct 31230285  T
Q  508 acattttattcgggctttc 526  Q
     | ||||||||||||||||    
T  31230284 gcgttttattcgggctttc 31230266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 26264392 - 26264538
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaatta-ttaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  26264392 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caataatttaggcccaagccctata-tttatt 26264489  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||| ||||||||||| | ||||||||||||||||||||||    
T  26264490 cgggctaaacggaccggcccatacgggccggcccgttttgacagctcta 26264538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 38986612 - 38986735
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||  ||||||||||||  ||||| || ||||  ||| ||||||||| |     
T  38986612 ggctttttcgggccgggctaaaaagccctagaaaaattcgggctgaaatttttgagcccaagccctaagttttactcaggctaacggtccggcccattcg 38986711  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    | |  |||||||||||||||||||    
T  38986712 ggctagcccgttttgacagctcta 38986735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 75043 - 74953
Alignment:
Q  475 aaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||  | |  |||||||||||||||||||    
T  75043 aaatacgggctgcaatttttaggcccaagccctacgttttattcgggctttcggaccgacccatatgggctagcccgttttgacagctcta 74953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 445 - 538
Target Start/End: Original strand, 1398370 - 1398464
Alignment:
Q  445 ttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctac-attttattcgggctttcgggccggcccat 538  Q
    ||||||||||||||| ||||||||||    ||||||||||||| ||| |||||||||||||||||  |||| |||||||||||||||||||||||    
T  1398370 ttttacgggccgggccaaaaagccctatttaaattcgggctgccatttttaggcccaagccctacgttttttttcgggctttcgggccggcccat 1398464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 36016368 - 36016253
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || || ||||| |||||||| |||||||||||||||||||||||        |||||||||| |||     
T  36016368 ggcttttacgggccgggctaaaaagccctcttcaattttgggctccaattattcggcccaagccctacattttattc--------gggccggcccttacg 36016277  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  36016276 gcccggcccattttgacagctcta 36016253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 7949728 - 7949875
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||| ||||   |||||| ||||| |||| | |||||||||| ||||| |||| |||    
T  7949728 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaatttgggct-caatattttaggcccaaaccctatattt-att 7949825  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||   ||||| ||||||||| |||||||||||||||||||||||||    
T  7949826 cgggctaaacgggctggcccatacggcccggcccgttttgacagctctac 7949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 443 - 573
Target Start/End: Original strand, 5361197 - 5361327
Alignment:
Q  443 gcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggcttt-cgggccggcccatac 540  Q
    |||||||  |||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| |||| |||||||||   |||||||||||||||    
T  5361197 gcttttaacggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctatattt-attcgggctaaacgggccggcccatac 5361294  T
Q  541 agcccggcccgttttgacagctctacctgctgt 573  Q
     ||||| ||| ||||||||||||||| ||||||    
T  5361295 ggcccgacccattttgacagctctacttgctgt 5361327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 565
Target Start/End: Complemental strand, 6453133 - 6452985
Alignment:
Q  418 acgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctgga-aaaattcgggctgcaattattaggcccaagccctacattttat 516  Q
    ||||| ||||||  |||||| || || ||||||||| ||||||||||||||||    ||||||||||||||||||||| ||| ||| |||||||||||||    
T  6453133 acgggttagccctaacgggttacgggtttttacgggtcgggctaaaaagccctcttcaaaattcgggctgcaattattcggcacaaaccctacattttat 6453034  T
Q  517 tcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||| |||||| | ||||| | ||   ||||| || ||||||||||||||    
T  6453033 tcgagctttcagaccggctcgtatgacccggtccattttgacagctcta 6452985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 527
Target Start/End: Complemental strand, 36866236 - 36866128
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 518  Q
    |||||||||||| | | || || |||||||||||| |||| |||||||||||| |||||||||||||||| ||||| | ||||| | |||| ||||||||    
T  36866236 cgggctagcccgaatgagttacgggcttttacgggtcgggataaaaagccctgaaaaaattcgggctgcacttattcgacccaaactctacgttttattc 36866137  T
Q  519 gggctttcg 527  Q
    | |||||||    
T  36866136 gagctttcg 36866128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 566
Target Start/End: Complemental strand, 1845468 - 1845415
Alignment:
Q  513 ttattcgggctttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  1845468 ttattcgggctttcgggccggcccttacggcccggcccattttgacagctctac 1845415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 28759372 - 28759475
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  28759372 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 28759469  T
Q  518 cgggct 523  Q
    ||||||    
T  28759470 cgggct 28759475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 21151731 - 21151877
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    |||||| ||||  ||||||| |||||||||  || |||||||||||||||||    ||||||||||| ||||  ||| ||||||||||||| | || ||     
T  21151731 cgggctggccctaacgggtagcaggctttttaggtccgggctaaaaagccctattgaaattcgggct-caatatttaaggcccaagccctataattaat- 21151828  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||||||||||||| ||||||||||||||||||||||||    
T  21151829 cgggctaaacgggccggcccatacggcccggcccgttttgacagctcta 21151877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 432 - 565
Target Start/End: Complemental strand, 26507331 - 26507198
Alignment:
Q  432 acgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct-ttcggg 529  Q
    ||||||| | |||||||| ||||||||||||||||||||   ||||||| |||| |||| | || ||||||||||||| | ||||||||||||   ||||    
T  26507331 acgggtaccgggcttttaagggccgggctaaaaagccctatcaaaattcaggct-caatattttcggcccaagccctata-tttattcgggctaaacggg 26507234  T
Q  530 ccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||  | || |||||||||||||||||||    
T  26507233 ccggcccatatgggcctgcccgttttgacagctcta 26507198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 528
Target Start/End: Complemental strand, 17085461 - 17085407
Alignment:
Q  474 aaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgg 528  Q
    |||||||||||| |||||||| ||||||  |||||||||||||||||||||||||    
T  17085461 aaaattcgggcttcaattattcggcccagaccctacattttattcgggctttcgg 17085407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 2466308 - 2466411
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    ||||||||||   ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  2466308 cgggctagccataacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 2466405  T
Q  518 cgggct 523  Q
    ||||||    
T  2466406 cgggct 2466411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 442 - 515
Target Start/End: Original strand, 4975803 - 4975876
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacatttta 515  Q
    ||||||| ||| ||||||||||||| | | |||||||||| ||| |||||||||||||||| |||||| |||||    
T  4975803 ggctttttcggaccgggctaaaaagtcttagaaaaattcgagctacaattattaggcccaaaccctacgtttta 4975876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 20122815 - 20122712
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | ||||| |||||||||| | ||||||    
T  20122815 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggtccaagccctata-tttatt 20122718  T
Q  518 cgggct 523  Q
    ||||||    
T  20122717 cgggct 20122712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 565
Target Start/End: Original strand, 21158973 - 21159012
Alignment:
Q  526 cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  21158973 cgggccggcccatacggcccggcccgttttgacagctcta 21159012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 442 - 536
Target Start/End: Original strand, 3436727 - 3436821
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    ||||||| || ||||||||||||||||||  |||||||||||| || |||  | |||| |  ||||||||||||||| | ||||||| |||||||    
T  3436727 ggctttttcgagccgggctaaaaagccctaaaaaaattcgggcagctatttattggccaagaccctacattttattcagactttcggaccggccc 3436821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 3296215 - 3296166
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaatt 491  Q
    |||||||  ||||||||||||||||||||| || ||||||||||||||||    
T  3296215 ggcttttttgggccgggctaaaaagccctgaaacaattcgggctgcaatt 3296166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 18922268 - 18922122
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattagg-cccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||  ||||||||||||||| || |   |||||||||||| ||||  ||| | ||||||||||| | || ||     
T  18922268 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaaaccatattaaaattcgggct-caatatttaagacccaagccctataattaat- 18922171  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   |||||||||||| || ||||||||||||||||||||||||    
T  18922170 cgggctaaacgggccggcccacacggcccggcccgttttgacagctcta 18922122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 21162674 - 21162820
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    |||||| ||||  ||||||| | |||||||  || |||||||||||||||||    ||||||||||| ||||  ||| ||||||||||||| | || ||     
T  21162674 cgggctggccctaacgggtagcgggctttttaggtccgggctaaaaagccctattgaaattcgggct-caatatttaaggcccaagccctataattaat- 21162771  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||| ||||||||| ||||||||||||||||||||||||    
T  21162772 cgggctaaacgggcgggcccatacggcccggcccgttttgacagctcta 21162820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 565
Target Start/End: Original strand, 7344797 - 7344836
Alignment:
Q  526 cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  7344797 cgggccggcccatacggcccggtccgttttgacagctcta 7344836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 442 - 523
Target Start/End: Original strand, 1840570 - 1840650
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct 523  Q
    |||||||| ||| ||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||||||||    
T  1840570 ggcttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttattcgggct 1840650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 485
Target Start/End: Complemental strand, 16749062 - 16748996
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    |||||||||||  ||||||| | |||||||| ||||||||| ||||||||||   ||||||||||||    
T  16749062 cgggctagccctaacgggtatcgggcttttaagggccgggcaaaaaagccctattaaaattcgggct 16748996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 567
Target Start/End: Complemental strand, 4725176 - 4725139
Alignment:
Q  530 ccggcccatacagcccggcccgttttgacagctctacc 567  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  4725176 ccggcccatacggcccggtccgttttgacagctctacc 4725139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 7827051 - 7827092
Alignment:
Q  526 cgggccggcccatacagcccggcccgttttgacagctctacc 567  Q
    ||||||||||||||| | |||| |||||||||||||||||||    
T  7827051 cgggccggcccatacggtccggtccgttttgacagctctacc 7827092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 16654014 - 16653911
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  |||||||   |||||||| |||||| |||||||||||||   ||||||| |||| |||| | |||||||||||||||| | ||||||    
T  16654014 cgggctagccctaacgggtactgggcttttaagggccgtgctaaaaagccctattaaaattcaggct-caatattttaggcccaagccctata-tttatt 16653917  T
Q  518 cgggct 523  Q
    ||||||    
T  16653916 cgggct 16653911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 523
Target Start/End: Original strand, 27345289 - 27345368
Alignment:
Q  443 gcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct 523  Q
    ||||||| ||||||||||||||||||||   |||||||||||| |||| | ||| |||||||||||| | ||||||||||||    
T  27345289 gcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttatgcccaagccctata-tttattcgggct 27345368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 6e-42; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 400 - 539
Target Start/End: Original strand, 15614123 - 15614262
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 499  Q
    ||||| ||||| |||| |||||||||||||  || ||   | ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15614123 gggctgcccgtggcccgaacgggctagccctaacaggctccgggctttttcggggcgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 15614222  T
Q  500 caagccctacattttattcgggctttcgggccggcccata 539  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  15614223 caagccctatattttattcgggctttcgggccggcccata 15614262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 442 - 566
Target Start/End: Complemental strand, 25096401 - 25096277
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  25096401 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 25096302  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||||||| |||||||||||||||    
T  25096301 gcccggcccattttgacagctctac 25096277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 21747514 - 21747391
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  21747514 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 21747415  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  21747414 gcccggcccattttgacagctcta 21747391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 15560582 - 15560705
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  15560582 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 15560681  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||  ||||||||||||||    
T  15560682 gcccggcctattttgacagctcta 15560705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 29201422 - 29201545
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||     
T  29201422 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcggcccggcccttacg 29201521  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||| ||| ||||||||||||||    
T  29201522 gcccgacccattttgacagctcta 29201545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 40000803 - 40000925
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  40000803 ggcttttacgggccgggctaaaaagccctcttcaatttcgggcc-caattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 40000901  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  40000902 gcccggcccattttgacagctcta 40000925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 20922776 - 20922900
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| ||  | || |||||||||||||||||||| ||||||| |||     
T  20922776 ggctttttcgggccgggctaaaaagccctgaaaaaattcgggctgcaattattcggcacagactctgcattttattcgggctttcggaccggcccgtacg 20922875  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||||||  |||||||||||||||    
T  20922876 gcccggccaattttgacagctctac 20922900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 450 - 566
Target Start/End: Original strand, 42730738 - 42730854
Alignment:
Q  450 cgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcc 549  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||||| ||| |||||  |    
T  42730738 cgggtcgggctaaaaagccctgaaaaaattcgggctgctattattcggcccaagccctgcattttattcgggctttcggcccggcccgtacggcccgatc 42730837  T
Q  550 cgttttgacagctctac 566  Q
    | |||||||||||||||    
T  42730838 cattttgacagctctac 42730854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 432 - 536
Target Start/End: Complemental strand, 5271179 - 5271075
Alignment:
Q  432 acgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggcc 531  Q
    |||||| || || |||| ||||||||||||||||| |||||||||||||||||| ||||| || |||||||||||| |||||||||||||||||||||||    
T  5271179 acgggttacggggttttgcgggccgggctaaaaagtcctggaaaaattcgggctccaatttttcggcccaagccctgcattttattcgggctttcgggcc 5271080  T
Q  532 ggccc 536  Q
    |||||    
T  5271079 ggccc 5271075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 445 - 565
Target Start/End: Complemental strand, 9470918 - 9470798
Alignment:
Q  445 ttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcc 544  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||  ||  |||    
T  9470918 tttttcgggccgggctaaaaagccctgaaaaaattcgggctgctatttatcggcccaaaccctacattttattcgggctttcgggccggcctgtaaggcc 9470819  T
Q  545 cggcccgttttgacagctcta 565  Q
    ||| || ||||||||||||||    
T  9470818 cggtccattttgacagctcta 9470798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 394 - 536
Target Start/End: Original strand, 38838006 - 38838148
Alignment:
Q  394 gctgcggggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattat 493  Q
    ||||| ||||||||||| ||||  |||||  ||||||| ||||  || |||||||| ||| |||||||| ||||| |  |||||||||| |||||||| |    
T  38838006 gctgccgggctacccgtggcccgtacgggtaagcccggtcgggctacgggcttttatgggtcgggctaacaagccttaaaaaaattcggactgcaatttt 38838105  T
Q  494 taggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  38838106 taggcccaagccctacgttttattcgggctttcgggccggccc 38838148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 469 - 565
Target Start/End: Original strand, 17088255 - 17088352
Alignment:
Q  469 ctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc-atacagcccggcccgttttgacagctcta 565  Q
    |||||||||||||||||  |||||||| |||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||    
T  17088255 ctggaaaaattcgggctaaaattattaagcccaaaccctacattttattcgggctttcgggccggcccaatacgggccggcccgttttgacagctcta 17088352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 445 - 565
Target Start/End: Original strand, 26556501 - 26556622
Alignment:
Q  445 ttttacgggccgggctaaaaagccctgga-aaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagc 543  Q
    ||||||||||||||||||||||||||    |||||||| |||||||||||| |||||||||||||||||||| |||| ||||||||||||||| |||  |    
T  26556501 ttttacgggccgggctaaaaagccctcttcaaaattcgagctgcaattattcggcccaagccctacattttaatcggactttcgggccggcccgtacgtc 26556600  T
Q  544 ccggcccgttttgacagctcta 565  Q
    ||||||| ||||||| ||||||    
T  26556601 ccggcccattttgacggctcta 26556622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 400 - 568
Target Start/End: Complemental strand, 4565056 - 4564889
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 499  Q
    ||||| ||||| |||| |||||| |||||| ||||||  || ||||||| ||||  ||| |||||| | |||||||| |||||||||||||| ||||||     
T  4565056 gggctgcccgtggcccaaacgggttagccctgacgggctacgggctttttcgggttgggttaaaaa-ctctggaaaatttcgggctgcaatttttaggca 4564958  T
Q  500 caagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctctacct 568  Q
    |||||||||||||||||||| || ||| |||||| |||||  | |||||||||||||||||||| ||||    
T  4564957 caagccctacattttattcgagcgttcaggccggtccatatgggccggcccgttttgacagctccacct 4564889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 469 - 540
Target Start/End: Original strand, 17071256 - 17071327
Alignment:
Q  469 ctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  17071256 ctggaaaaattcgggctgaaattattaagcccaaaccctacattttattcgggctttcgggccggcccatac 17071327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 17920884 - 17920761
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| |||||||||||||||||||||  |||||||| |||||| |||  | ||||||| ||||||||||||||| ||||||||||||||||  ||      
T  17920884 ggctttttcgggccgggctaaaaagccctaaaaaaattcaggctgctatttatcggcccaaaccctacattttattcaggctttcgggccggcctgtaag 17920785  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||| ||| ||||||||||||||    
T  17920784 gcccgacccattttgacagctcta 17920761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 422 - 565
Target Start/End: Complemental strand, 29810822 - 29810679
Alignment:
Q  422 gctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgg 520  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||| ||||   |||||||||||| |||| | |||||||||||||||| |||| ||||||    
T  29810822 gctagccctaacgggtaccaggcttttaagggccgggctaaaaatccctattaaaattcgggct-caatattttaggcccaagccctatattt-attcgg 29810725  T
Q  521 gcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||   |||||||||||||||||| | |||||||||||||||||||    
T  29810724 gctaaacgggccggcccatacagctcagcccgttttgacagctcta 29810679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 27495992 - 27495846
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  27495992 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 27495895  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||||||||||||| | |||| |||||||||||||||||    
T  27495894 cgggctaaacgggccggcccatacgggccggtccgttttgacagctcta 27495846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 469 - 536
Target Start/End: Original strand, 17077328 - 17077395
Alignment:
Q  469 ctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||    
T  17077328 ctggaaaaattcgggctgaaattattaagcccaaaccctacattttattcgggctttcgggccggccc 17077395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 419 - 567
Target Start/End: Complemental strand, 31742988 - 31742840
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  | ||||| | |||||||| ||||||||||||||||| ||   |||||||||||| |||| | |||||||||||||||| |||| |||    
T  31742988 cgggctagccctaatgggtaccgggcttttaagggccgggctaaaaagctctattaaaattcgggct-caatattttaggcccaagccctatattt-att 31742891  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctacc 567  Q
    ||||||   ||||||||||||||| | ||||||||||||||||||||||||    
T  31742890 cgggctaaacgggccggcccatacgggccggcccgttttgacagctctacc 31742840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 527
Target Start/End: Original strand, 40861051 - 40861136
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcg 527  Q
    |||||||||||||| ||||||||||||||    || |||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  40861051 ggcttttacgggccaggctaaaaagccctcttcaatttcgggctccaattattcggctcaagccctacattttattcgggctttcg 40861136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 4471014 - 4471105
Alignment:
Q  474 aaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||| ||||||| |||||| |||||||||||||||||||| || |||||| |||||||||| ||||   |||||| ||||||||||||||    
T  4471014 aaaatttgggctgccattatttggcccaagccctacattttaatcaggcttttgggccggcccgtacaattcggcccattttgacagctcta 4471105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 1002507 - 1002653
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||| ||| |||| | |||||||||| ||||| | ||||||    
T  1002507 cgggctagccctaacgggtaccgggcttttatgggccgggctaaaaagccctattaaaattcgagct-caatattttaggcccaaaccctata-tttatt 1002604  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||||| ||||||| ||||| ||| ||||||||||||||    
T  1002605 cgggctaaacgggccgacccatacggcccgacccattttgacagctcta 1002653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 1346280 - 1346383
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | | |||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  1346280 cgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 1346377  T
Q  518 cgggct 523  Q
    ||||||    
T  1346378 cgggct 1346383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 28223022 - 28222875
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| | ||||||||||||||||||   |||||||||||| || | | |||||||||  ||||| |||| |||    
T  28223022 cgggctagccctaacgggtaccgggcttttaagagccgggctaaaaagccctattaaaattcgggct-cattattttaggcccagaccctatattt-att 28222925  T
Q  518 cgggctttcg-ggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||     |||||||||||||  ||||||||||||||||||||||||    
T  28222924 cgggctaaataggccggcccatacgacccggcccgttttgacagctctac 28222875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 35439538 - 35439641
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||| ||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  35439538 cgggcttgccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 35439635  T
Q  518 cgggct 523  Q
    ||||||    
T  35439636 cgggct 35439641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 419 - 513
Target Start/End: Original strand, 2650090 - 2650184
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattt 513  Q
    |||||||||||  ||||||| | |||||||| || |||||||||||||||||   |||||||||||| |||| | |||||||||||||||| ||||    
T  2650090 cgggctagccctaacgggtaccgggcttttaaggaccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctatattt 2650184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 432 - 565
Target Start/End: Original strand, 18258065 - 18258197
Alignment:
Q  432 acgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct-ttcggg 529  Q
    ||||||| | |||||||| |||||||| |||||||||||   ||||||||| || |||| | ||||||||||| |||| | ||||||||||||   ||||    
T  18258065 acgggtaccgggcttttaagggccggggtaaaaagccctattaaaattcggact-caatattttaggcccaagtcctata-tttattcgggctaaacggg 18258162  T
Q  530 ccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||||||||| ||||| ||||||||||| |||||    
T  18258163 ccggcccatacatcccgg-ccgttttgacaactcta 18258197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 432 - 528
Target Start/End: Complemental strand, 38570778 - 38570685
Alignment:
Q  432 acgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgg 528  Q
    ||||||||  || |||| ||| ||||||||||||||| ||     ||||||||||||||| ||||||||||||||||   |||||||||||||||||    
T  38570778 acgggtaaagggttttttcggaccgggctaaaaagccttgagtttattcgggctgcaatttttaggcccaagcccta---tttattcgggctttcgg 38570685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 10261418 - 10261315
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||| | ||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  10261418 cgggctagccctaacgggtaccgggcttttaagggtcaggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 10261321  T
Q  518 cgggct 523  Q
    ||||||    
T  10261320 cgggct 10261315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 10440249 - 10440146
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  || |||| | |||||||| ||| ||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  10440249 cgggctagccctaacaggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 10440152  T
Q  518 cgggct 523  Q
    ||||||    
T  10440151 cgggct 10440146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 4918250 - 4918302
Alignment:
Q  473 aaaaattcgggctgcaattattaggcccaagccctacattttattcgggcttt 525  Q
    ||||||| |||| |||||||| ||||||||||||||| |||||||||| ||||    
T  4918250 aaaaatttgggccgcaattataaggcccaagccctacgttttattcggacttt 4918302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 13247835 - 13247771
Alignment:
Q  421 ggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    |||||||||  ||||||| | |||||||| ||||||||||||||||||||   ||||||||||||    
T  13247835 ggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct 13247771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 36240754 - 36240900
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||| ||||||||||||||||   |||||||||||| |||| | ||| |||||| ||||| | ||||||    
T  36240754 cgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttatgcccaaaccctata-tttatt 36240851  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||| |||| |||||| |||||  || ||||||||||||||    
T  36240852 cgggctaaacggaccggtccatacggcccgatccattttgacagctcta 36240900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 565
Target Start/End: Original strand, 26984575 - 26984614
Alignment:
Q  526 cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  26984575 cgggccggcccatacggcccagcccgttttgacagctcta 26984614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 30801211 - 30801274
Alignment:
Q  422 gctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    ||||||||  ||||||| | |||||||| ||||||||||||||||||||   ||||||||||||    
T  30801211 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct 30801274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 503 - 565
Target Start/End: Original strand, 12465989 - 12466051
Alignment:
Q  503 gccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||| ||| |||||||||||||| ||||||  ||| | ||| ||||||||||||||    
T  12465989 gccctacatttaatttgggctttcgggccgacccataaggcctgacccattttgacagctcta 12466051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 565
Target Start/End: Complemental strand, 30555639 - 30555605
Alignment:
Q  531 cggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||||||| ||||||||||||||||||||||||    
T  30555639 cggcccatacggcccggcccgttttgacagctcta 30555605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 6e-42; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 394 - 565
Target Start/End: Original strand, 31489464 - 31489635
Alignment:
Q  394 gctgcggggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattat 493  Q
    ||||| |||||||||| ||||| |||||||||||||  ||||||||| ||| ||| ||||||||| |||||||||| | |   |||||||||| |||| |    
T  31489464 gctgccgggctacccgaagcccgaacgggctagccctaacgggtaacgggccttttcgggccgggttaaaaagcccggaatttattcgggctgtaatttt 31489563  T
Q  494 taggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||||||||||||  |||||||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  31489564 taggcccaagccctatgttttattcgggctttcgggctggcccattcggcccggcccgttttgacagctcta 31489635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 33189123 - 33189000
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  33189123 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 33189024  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  33189023 gcccggcccattttgacagctcta 33189000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 12745675 - 12745551
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  12745675 ggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 12745576  T
Q  541 agcccggcccgttttgacagctcta 565  Q
     ||||||||| ||||||||||||||    
T  12745575 ggcccggcccattttgacagctcta 12745551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 12756664 - 12756540
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  12756664 ggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 12756565  T
Q  541 agcccggcccgttttgacagctcta 565  Q
     ||||||||| ||||||||||||||    
T  12756564 ggcccggcccattttgacagctcta 12756540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 42763260 - 42763384
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||||||| |||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  42763260 ggcttttacggaccgggctaaaaagccctcttcaatttcgggcttcaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 42763359  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||||||| |||||||||||||||    
T  42763360 gcccggcccattttgacagctctac 42763384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 9660834 - 9660957
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| |||     
T  9660834 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggatttcgggccggcccttacg 9660933  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  9660934 gcccggcccattttgacagctcta 9660957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 426 - 565
Target Start/End: Complemental strand, 32057669 - 32057530
Alignment:
Q  426 gcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggcttt 525  Q
    ||||| |||||| || ||||||||||| ||||||||||||||||| |||||||||||||| ||||| || |||||| ||||| | ||||||||||| |||    
T  32057669 gcccgaacgggttacgggcttttacggaccgggctaaaaagccctagaaaaattcgggctccaatttttcggcccaggccctgcgttttattcgggattt 32057570  T
Q  526 cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||||||| ||||| ||| ||||||||||||||    
T  32057569 cgggccggcccatacggcccgccccattttgacagctcta 32057530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 442 - 567
Target Start/End: Original strand, 45757249 - 45757374
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||| ||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  45757249 ggcttttatgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 45757348  T
Q  542 gcccggcccgttttgacagctctacc 567  Q
    ||||| ||| ||||||||||||||||    
T  45757349 gcccgacccattttgacagctctacc 45757374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 43781178 - 43781301
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||| ||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||     
T  43781178 ggcttttacgggccgggctaaaaaaccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttacg 43781277  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||| ||||| ||||||||||||||    
T  43781278 gcctggcccattttgacagctcta 43781301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 442 - 536
Target Start/End: Original strand, 46237605 - 46237699
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||    
T  46237605 ggctttttcgggccgagctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctatattttattcgggctttcaggtcggccc 46237699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 570 - 697
Target Start/End: Original strand, 27883894 - 27884020
Alignment:
Q  570 ctgtaattgcttcgcagagtttgatttcagctaccaattagagattgaacgactgcggccaaagatatgctacagtaagacaccaaaacaacatcaaatc 669  Q
    |||||||||||||  | |||||||| ||| |||||||||| |||||||||| |||||||||| |||  ||||||| |||||||   ||||||| ||||||    
T  27883894 ctgtaattgcttcaaacagtttgatctcaactaccaattaaagattgaacggctgcggccaa-gatcggctacagcaagacactgtaacaacaccaaatc 27883992  T
Q  670 atgttccgacatttacaacttttgaata 697  Q
    ||||||||||||||||||||||||||||    
T  27883993 atgttccgacatttacaacttttgaata 27884020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 48470438 - 48470562
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||| |||  | ||||||  |||||||||||||||||||||| |||||||||| ||      
T  48470438 ggctttttcgggccgggctaaaaagtcctgaaaaaattcgggctgctatttatcggcccagaccctacattttattcgggcttttgggccggcccgtaag 48470537  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||| ||| |||||||| ||||||    
T  48470538 gcccgacccattttgacacctctac 48470562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 419 - 568
Target Start/End: Complemental strand, 5115015 - 5114866
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 518  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   ||||||||||||  |  | |||||||||||||||| | |||||||    
T  5115015 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggcttaatattttaggcccaagccctata-tttattc 5114917  T
Q  519 gggct-ttcgggccggcccatacagcccggcccgttttgacagctctacct 568  Q
    |||||   ||||||||||||||| | |||||||||||||||||||| ||||    
T  5114916 gggctaaacgggccggcccatacgggccggcccgttttgacagctcaacct 5114866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 49229174 - 49229297
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||| ||||| |||||||||||||||| |||||| |||||||| |||  | ||||||| |||| |||||||||||||||||||||| ||||| ||      
T  49229174 ggctttttcgggc-gggctaaaaagccctgaaaaaatccgggctgctatttatcggcccaaaccctgcattttattcgggctttcgggctggcccgtaag 49229272  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    |||||| || |||||||||||||||    
T  49229273 gcccggtccattttgacagctctac 49229297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 422 - 566
Target Start/End: Complemental strand, 28199324 - 28199180
Alignment:
Q  422 gctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgg 520  Q
    ||||||||  ||||||| | |||||||| ||||||||||||||||||||    ||||||||||| |||| | |||||||||| ||||| |||| ||||||    
T  28199324 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattcaaattcgggct-caatattttaggcccaaaccctatattt-attcgg 28199227  T
Q  521 gcttt-cgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    |||   ||||||||||||||||| |||||||||||||||||||||||    
T  28199226 gctaaacgggccggcccatacaggccggcccgttttgacagctctac 28199180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 30533512 - 30533367
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 518  Q
    |||||||||||  ||||| |||  |||||| ||||||||||||||||||||   |   || ||||||| |||| ||||||||||| ||||||||||||||    
T  30533512 cgggctagcccaaacgggcaacgagctttt-cgggccgggctaaaaagcccataatctatccgggctgtaatttttaggcccaagacctacattttattc 30533414  T
Q  519 gggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||||||||||| |||||   | |||| |||||||||||||||||    
T  30533413 gggctttcgggccgacccatttggtccggtccgttttgacagctcta 30533367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 47188575 - 47188696
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||||||||||||||||||||| |||    || ||| |||| ||||||||  |||||||||||||||||||||||||||||| ||||||| | |||     
T  47188575 ggcttttacgggccgggctaaaaagtcctcttcaatttcaggctccaattatt--gcccaagccctacattttattcgggctttcaggccggctcttac- 47188671  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    | ||||||| |||||||||||||||    
T  47188672 ggccggcccattttgacagctctac 47188696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 48812550 - 48812697
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||| ||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  48812550 cgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 48812647  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||   |||| |||||||||| | |||||||||||||||||||||||    
T  48812648 cgggctaaacgggacggcccatacgggccggcccgttttgacagctctac 48812697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 422 - 565
Target Start/End: Complemental strand, 19406753 - 19406610
Alignment:
Q  422 gctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgg 520  Q
    ||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | |||||||||    
T  19406753 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttattcgg 19406656  T
Q  521 gct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||   ||||||||||||||| | ||||||| |||||||| |||||    
T  19406655 gctaaacgggccggcccatacgggccggcccattttgacaactcta 19406610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 39995470 - 39995616
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||| ||| |||| | |||||||||| ||||| | ||||||    
T  39995470 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgagct-caatattttaggcccaaaccctata-tttatt 39995567  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||| ||||||||||||| ||| ||||||||||||||||||    
T  39995568 cgggctaaacggaccggcccatacagaccgacccgttttgacagctcta 39995616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 536
Target Start/End: Complemental strand, 6501706 - 6501612
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    ||||||| |||||||||||||||||| ||| ||||||| ||||| | |||  | |||||| ||||| ||||||||||||||||||||| ||||||    
T  6501706 ggctttttcgggccgggctaaaaagctctgaaaaaatttgggcttctatttatcggcccaggccctgcattttattcgggctttcgggtcggccc 6501612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 40601744 - 40601891
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  | ||||| | |||||||| ||||||||||||||||| ||   |||||||||||| |||| | |||||||||| ||||| |||| |||    
T  40601744 cgggctagccctaatgggtaccgggcttttaagggccgggctaaaaagctctattaaaattcgggct-caatattttaggcccaaaccctatattt-att 40601841  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    |||| |   ||||||||||||||| | |||||||||||||||||||||||    
T  40601842 cgggttaaacgggccggcccatacgggccggcccgttttgacagctctac 40601891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 563
Target Start/End: Complemental strand, 42102298 - 42102156
Alignment:
Q  421 ggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcg 519  Q
    |||||||||  ||||||| |  ||||||| ||||||||||||||||||||   |||||||||||| |||| | |||| ||||| ||||| |||| |||||    
T  42102298 ggctagccctaacgggtaccgagcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagacccaaaccctatattt-attcg 42102201  T
Q  520 ggcttt-cgggccggcccatacagcccggcccgttttgacagctc 563  Q
    ||||   ||||| ||||||||| ||||||||||||||||||||||    
T  42102200 ggctaaacgggctggcccatacggcccggcccgttttgacagctc 42102156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 44372894 - 44373041
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  |||| || | | |||||| ||||||||||||||||||||   ||||||| |||| |||| | |||||||||||||||| |||| |||    
T  44372894 cgggctagccctaacggataccggacttttaagggccgggctaaaaagccctattaaaattcaggct-caatattttaggcccaagccctatattt-att 44372991  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||   ||||||||||||||  | |||| ||||||||||||||||||    
T  44372992 cgggctaaacgggccggcccatatgggccggtccgttttgacagctctac 44373041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 44922301 - 44922154
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||  ||||||||||||||||||||   |||||||||||| ||||  ||| |||||||||| || | || |||    
T  44922301 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcgggct-caatatttaaggcccaagccttataattaatt 44922203  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctac 566  Q
     |||||   ||||| ||||||||| |||||||||||||||||||||||||    
T  44922202 -gggctaaacgggctggcccatacggcccggcccgttttgacagctctac 44922154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 45039117 - 45038952
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 499  Q
    ||||| ||| |||||| | ||||| |||||  ||||||  | ||||||| |||| ||||||||||| |||||||||||||||||||  |||| ||  |||    
T  45039117 gggctgcccttagcccgagcgggccagcccaaacgggttgcgggctttttcgggtcgggctaaaaaaccctggaaaaattcgggctagaatttttgtgcc 45039018  T
Q  500 caagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||| |||||  ||||| |||||||  ||||||| || || | | |  |||||||||||||||||||    
T  45039017 caaaccctaagttttactcgggctaacgggccgccctattcggactagcccgttttgacagctcta 45038952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 450 - 538
Target Start/End: Complemental strand, 4220973 - 4220885
Alignment:
Q  450 cgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccat 538  Q
    |||||| ||||||||||||||  ||||||| |||| || ||| || |||||| ||||| |||||| ||||||||||||| |||||||||    
T  4220973 cgggccaggctaaaaagccctaaaaaaatttgggcggccatttttcggcccaggccctgcatttttttcgggctttcggaccggcccat 4220885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 1858786 - 1858889
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    ||||| |||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  1858786 cgggccagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 1858883  T
Q  518 cgggct 523  Q
    ||||||    
T  1858884 cgggct 1858889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 30723410 - 30723307
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||| ||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  30723410 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 30723313  T
Q  518 cgggct 523  Q
    ||||||    
T  30723312 cgggct 30723307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 41310539 - 41310642
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||  | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  41310539 cgggctagccctaacgggtgccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 41310636  T
Q  518 cgggct 523  Q
    ||||||    
T  41310637 cgggct 41310642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 15699330 - 15699394
Alignment:
Q  450 cgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacatttt 514  Q
    |||||||||| |||||||||||   ||||||||||||| ||| ||||||||||||||||| ||||    
T  15699330 cgggccgggccaaaaagccctgtttaaattcgggctgccatttttaggcccaagccctacctttt 15699394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 40412529 - 40412675
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||  |||||||| |||||||||||   |||||||||||| ||||  ||| |||||||||| || | || ||     
T  40412529 cgggctagccctaacgggtagcgggctttttagggccgggttaaaaagccctattaaaattcgggct-caatatttaaggcccaagccttataattaat- 40412626  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   |||||||||| |||| ||||||||||||||||||||||||    
T  40412627 cgggctaaacgggccggccaatacggcccggcccgttttgacagctcta 40412675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 536
Target Start/End: Complemental strand, 45565859 - 45565763
Alignment:
Q  440 caggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    |||| |||| |||||||||||||||||||||| |||| |||||||||| |||  |  ||| | ||||||||||||||| ||  ||||| ||||||||    
T  45565859 caggttttttcgggccgggctaaaaagccctgaaaaatttcgggctgctatttatcagcctaggccctacattttatttggattttcgagccggccc 45565763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 50511991 - 50512137
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||  ||||||||||||||||||||   |||||||||||| |||| | | ||| |||||||||| |  ||| |    
T  50511991 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcgggct-caatatttaaggaccaagccctata-attaat 50512088  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||    |||||||||||||| ||||||||| ||||||||||||||    
T  50512089 cgggctaaatgggccggcccatacggcccggcccattttgacagctcta 50512137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 485
Target Start/End: Complemental strand, 20722299 - 20722233
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    |||||||||||  ||||||| |||||||||   |||||||||||||||||||   ||||||||||||    
T  20722299 cgggctagccctaacgggtaccaggctttttaaggccgggctaaaaagccctattaaaattcgggct 20722233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 485
Target Start/End: Original strand, 21088540 - 21088606
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    |||||||||||  ||||||| | ||||||||  ||||||||||||||| ||||  ||||||||||||    
T  21088540 cgggctagccctaacgggtaccgggcttttaaaggccgggctaaaaaggcctgttaaaattcgggct 21088606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 6e-39; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 442 - 567
Target Start/End: Original strand, 35813442 - 35813568
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  35813442 ggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 35813541  T
Q  541 agcccggcccgttttgacagctctacc 567  Q
     ||||||||| ||||||||||||||||    
T  35813542 ggcccggcccattttgacagctctacc 35813568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 442 - 536
Target Start/End: Original strand, 42739371 - 42739465
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggccc 536  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42739371 ggcttttttgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcgggctttcgggccggccc 42739465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 30436473 - 30436598
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccct-ggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatac 540  Q
    |||||||||||||||||||||||||||||    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  30436473 ggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaattattcggcccaagccctacattttattcgggctttcgggccggcccttac 30436572  T
Q  541 agcccggcccgttttgacagctctac 566  Q
     ||||||||| |||||||||||||||    
T  30436573 ggcccggcccattttgacagctctac 30436598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 15243893 - 15243747
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 518  Q
    |||||||||||  |||||  || |||||| |||| |||||||||||||||||| || ||||||||||||||||||| |||||| ||||||||||||| ||    
T  15243893 cgggctagcccaaacgggctacgggctttaacggtccgggctaaaaagccctgaaagaattcgggctgcaattattcggcccaggccctacattttactc 15243794  T
Q  519 gggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
     ||||||||||||||||||||| ||||| ||| ||||||||| ||||    
T  15243793 aggctttcgggccggcccatacggcccgacccattttgacagttcta 15243747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 2349789 - 2349667
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||  ||||||||||||||||||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||| ||||| |||     
T  2349789 ggcttttttgggccgggctaaaaagccctg-aaaaattcgagctgcaattattcggcccaggccctacattttattcgggctttcgggctggcccgtacg 2349691  T
Q  542 gcccggcccgttttgacagctcta 565  Q
     |||||||| ||||||||||||||    
T  2349690 acccggcccattttgacagctcta 2349667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 442 - 566
Target Start/End: Original strand, 3654314 - 3654438
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    ||||||||||||||| |||||||||||||    || |||||||| |||||||| |||||||||||||||||||||||||||||| || ||||||| |||     
T  3654314 ggcttttacgggccgagctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggcttttggaccggcccttacg 3654413  T
Q  542 gcccggcccgttttgacagctctac 566  Q
    ||||||||  |||||||||||||||    
T  3654414 gcccggcctattttgacagctctac 3654438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 442 - 538
Target Start/End: Complemental strand, 3940767 - 3940670
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttc-gggccggcccat 538  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  3940767 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcgggctttcggggccggcccat 3940670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 6266382 - 6266235
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  6266382 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 6266285  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||   ||||||||||||||| | |||||||||||||||||||||||    
T  6266284 cgggctaaacgggccggcccatacgggccggcccgttttgacagctctac 6266235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 424 - 565
Target Start/End: Complemental strand, 9201224 - 9201084
Alignment:
Q  424 tagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggct 523  Q
    ||||||| | |||| || |||||||| || |||||||||||||| ||| || ||||| ||||||||||||| ||||||| |||||| |||||||||| ||    
T  9201224 tagcccgaaagggttacgggcttttatggaccgggctaaaaagctctgaaagaattcaggctgcaattattcggcccaaaccctacgttttattcggact 9201125  T
Q  524 ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||||||| |||||  | |||||||||||||||| |||||    
T  9201124 ttcgggccggtccata-tggccggcccgttttgacaactcta 9201084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 6143034 - 6142868
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcc 499  Q
    ||||| ||| |||||| |||||||||| ||| | |||| || || |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  6143034 gggctgcccttagcccaaacgggctagtccgaaagggttacgggtttttacgggccgggctaaaaagccctggaagaatccgggctgcaattattcggcc 6142935  T
Q  500 caagccctacattttattcgggc-tttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
     ||  ||||| ||||||| || | |||||| ||||||| ||  |||||  || ||||||||||||||    
T  6142934 taaatcctacgttttatttggacttttcggtccggcccgtatggcccgatccattttgacagctcta 6142868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 5927189 - 5927042
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  5927189 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 5927092  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||   ||||||| ||||||| | |||||||||||||||||||||||    
T  5927091 cgggctaaacgggccgacccatacgggccggcccgttttgacagctctac 5927042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 24101755 - 24101901
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  24101755 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 24101852  T
Q  518 cgggc-tttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||    ||||||||||||||| | ||||||||||||||||||||||    
T  24101853 cgggcgaaacgggccggcccatacgggccggcccgttttgacagctcta 24101901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 442 - 562
Target Start/End: Complemental strand, 28968290 - 28968170
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||  ||||||||||||||||||||| |||||||| |||| | |||||| |||||| ||||| ||||||||||||| |||||| ||| ||| |||     
T  28968290 ggcttttttgggccgggctaaaaagccctgaaaaaattcaggcttctattattcggcccaggccctgcattttattcgggttttcggaccgacccgtacg 28968191  T
Q  542 gcccggcccgttttgacagct 562  Q
    ||||||||  |||||||||||    
T  28968190 gcccggcctattttgacagct 28968170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 38231735 - 38231881
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  38231735 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 38231832  T
Q  518 cgggctttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||| ||    ||||||||||||| | |||||||||||||||||||||||    
T  38231833 cggactaaacggccggcccatacgggccggcccgttttgacagctctac 38231881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 41395922 - 41395775
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | | |||||| ||| ||||||||||||||||   |||||||||||| |||| | |||||||||||||||| |||| |||    
T  41395922 cgggctagccctaacgggtaccggacttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctatattt-att 41395825  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||   || |||||||||||| | |||||||||||||||||||||||    
T  41395824 cgggctacacgtgccggcccatacggtccggcccgttttgacagctctac 41395775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 31894942 - 31895087
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 518  Q
    |||| ||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| ||||  |||||||||||||||| | |||||||    
T  31894942 cgggttagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatatttaggcccaagccctata-tttattc 31895039  T
Q  519 gggct-ttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||   |||||||| || ||  | ||||||||||||||||||||||    
T  31895040 gggctaaacgggccggtccgtatgggccggcccgttttgacagctcta 31895087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 443 - 565
Target Start/End: Original strand, 29894474 - 29894596
Alignment:
Q  443 gcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacag 542  Q
    |||||| ||| ||||||||||||  |||| |   ||||||||||||||| ||||| ||||| ||||| ||||||||||||||| |||||||||||| |      
T  29894474 gctttttcggaccgggctaaaaaatcctgaatttattcgggctgcaatttttaggtccaagtcctacgttttattcgggcttttgggccggcccattcga 29894573  T
Q  543 cccggcccgttttgacagctcta 565  Q
    |||| ||| |||||| |||||||    
T  29894574 cccgacccattttgatagctcta 29894596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 418 - 522
Target Start/End: Original strand, 45451754 - 45451859
Alignment:
Q  418 acgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctgga-aaaattcgggctgcaattattaggcccaagccctacattttat 516  Q
    ||||||||||||  |||||| || || ||||||| |||||||||||||| |||    |||||||| |||||||||||| ||| |||||||||||||||||    
T  45451754 acgggctagccctaacgggttacgggtttttacgagccgggctaaaaagtcctcttcaaaattcgagctgcaattattcggctcaagccctacattttat 45451853  T
Q  517 tcgggc 522  Q
    ||||||    
T  45451854 tcgggc 45451859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 468 - 565
Target Start/End: Original strand, 19293590 - 19293687
Alignment:
Q  468 cctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||| ||||||||||||||||||||  ||| |||| || ||| ||||||| ||| |||||||||||||| ||| |||| |||| |||||||| |||||    
T  19293590 cctgaaaaaattcgggctgcaattaaaaggtccaaaccatacgttttattagggttttcgggccggcccgtacggcccagcccattttgacaactcta 19293687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 26098384 - 26098281
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  26098384 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 26098287  T
Q  518 cgggct 523  Q
    ||||||    
T  26098286 cgggct 26098281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 419 - 513
Target Start/End: Complemental strand, 15041446 - 15041352
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattt 513  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| ||||    
T  15041446 cgggctagccctaacgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatatcttaggcccaagccctatattt 15041352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 422 - 523
Target Start/End: Complemental strand, 40027852 - 40027752
Alignment:
Q  422 gctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgg 520  Q
    ||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | |||||||||    
T  40027852 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttattcgg 40027755  T
Q  521 gct 523  Q
    |||    
T  40027754 gct 40027752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 7161681 - 7161578
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||| ||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  7161681 cgggctagccctaacgggtaccgggcttttaagggacgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 7161584  T
Q  518 cgggct 523  Q
    ||||||    
T  7161583 cgggct 7161578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 11202189 - 11202292
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||| ||||| | ||||||    
T  11202189 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaaaccctata-tttatt 11202286  T
Q  518 cgggct 523  Q
    ||||||    
T  11202287 cgggct 11202292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Complemental strand, 37819322 - 37819219
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | ||||||| |||||||| | ||||||    
T  37819322 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggccgaagccctata-tttatt 37819225  T
Q  518 cgggct 523  Q
    ||||||    
T  37819224 cgggct 37819219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 41827561 - 41827664
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    ||||||||||   ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  41827561 cgggctagccttaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 41827658  T
Q  518 cgggct 523  Q
    ||||||    
T  41827659 cgggct 41827664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 432 - 565
Target Start/End: Complemental strand, 38894813 - 38894680
Alignment:
Q  432 acgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttattcgggcttt-cggg 529  Q
    ||||||| | |||||||  ||| ||||||||||||||||   |||||||||||| ||||  ||| || |||||||||| |||| || ||||||   || |    
T  38894813 acgggtagcgggctttttagggtcgggctaaaaagccctattaaaattcgggct-caatatttaaggtccaagccctatatttaat-cgggctaaacgag 38894716  T
Q  530 ccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||| ||||||||||||||||||||||||    
T  38894715 ccggcccatacggcccggcccgttttgacagctcta 38894680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 7433497 - 7433417
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct 523  Q
    |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||||||||    
T  7433497 ggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttattcgggct 7433417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 513
Target Start/End: Original strand, 41644165 - 41644278
Alignment:
Q  400 gggctacccgtagccctaacgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggc 498  Q
    |||||||||| |||||   |||| ||||||  ||||||| | |||||||| |||||||||||||||| |||   |||||||||||| |||| | ||||||    
T  41644165 gggctacccgcagcccattcgggttagccctaacgggtaccgggcttttaagggccgggctaaaaaggcctattaaaattcgggct-caatattttaggc 41644263  T
Q  499 ccaagccctacattt 513  Q
    |||||||||| ||||    
T  41644264 ccaagccctatattt 41644278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 24476390 - 24476493
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | ||| |||| |||||||||||||||||||    |||||||||||| |||| | |||||||||||||||| | ||||||    
T  24476390 cgggctagccctaacgggtaccgggcatttaagggccgggctaaaaagcccaattaaaattcgggct-caatattttaggcccaagccctata-tttatt 24476487  T
Q  518 cgggct 523  Q
    ||||||    
T  24476488 cgggct 24476493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 27640026 - 27640129
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  |||| || | |||||||| ||||||||||||||||||||   ||| |||||||| |||| | |||||||||||||||| | ||||||    
T  27640026 cgggctagccctaacggataccgggcttttaagggccgggctaaaaagccctattaaatttcgggct-caatattttaggcccaagccctata-tttatt 27640123  T
Q  518 cgggct 523  Q
    ||||||    
T  27640124 cgggct 27640129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 20823510 - 20823656
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattatta-ggcccaagccctacattttatt 517  Q
    ||||||| |||  ||||||| | |||||||  ||| ||||||||||||||||   |||||||||||| ||||  ||| ||| ||||||||| | || ||     
T  20823510 cgggctaaccctaacgggtaccgggctttttagggtcgggctaaaaagccctactaaaattcgggct-caatatttaaggcacaagccctataattaat- 20823607  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||||||||||||| ||||| ||||||||||||||||||    
T  20823608 cgggctaaacgggccggcccatacggcccgacccgttttgacagctcta 20823656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 565
Target Start/End: Complemental strand, 356448 - 356409
Alignment:
Q  526 cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  356448 cgggccggcccatacggcccgacccgttttgacagctcta 356409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 44679165 - 44679266
Alignment:
Q  421 ggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcg 519  Q
    |||||||||  ||||||| | |||||||| || |||||||||||||||||   |||||||||||| |||| | ||||||||||| |||| | ||||||||    
T  44679165 ggctagccctaacgggtaccgggcttttaaggaccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagtcctata-tttattcg 44679262  T
Q  520 ggct 523  Q
    ||||    
T  44679263 ggct 44679266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1449 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 469 - 565
Target Start/End: Original strand, 1581 - 1677
Alignment:
Q  469 ctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||||||||||||||||  |||||||| |||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  1581 ctggaaaaattcgggctaaaattattaagcccaaaccctacattttattcgggctttcgggccggcccatacgggccggcccgttttgacagctcta 1677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 444 - 566
Target Start/End: Complemental strand, 6261 - 6138
Alignment:
Q  444 cttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggcc-ggcccatacag 542  Q
    ||||| |||||||||||||||||||||| |||||||||| |||||||||||  ||||| ||||||||||||||||||||| |||| || ||||| || ||    
T  6261 cttttgcgggccgggctaaaaagccctgaaaaaattcggactgcaattattccgcccaggccctacattttattcgggctatcggcccaggcccgtaaag 6162  T
Q  543 cccggcccgttttgacagctctac 566  Q
    |||||||| |||||||||||||||    
T  6161 cccggcccattttgacagctctac 6138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 3747 - 3653
Alignment:
Q  473 aaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgg-gccggcccatacagcccggcccgttttgacagctctac 566  Q
    |||||||||| ||||||||||| ||||||  |||| ||||||||||||| | ||||  | ||||| || |||||||||| |||||||||||||||    
T  3747 aaaaattcggactgcaattattcggcccagaccctgcattttattcgggttatcggcacaggcccgtaaagcccggcccattttgacagctctac 3653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 16646 - 16769
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattcgggctttcgggccggcccataca 541  Q
    |||||||||||||||||||||||||||||    || |||||||| |||||||| ||||||||||||||||||||||||||||||| | |||| || |||     
T  16646 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctacaattattcggcccaagccctacattttattcgggctttcagaccggaccttacg 16745  T
Q  542 gcccggcccgttttgacagctcta 565  Q
    ||||||||| ||||||||||||||    
T  16746 gcccggcccattttgacagctcta 16769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 40058 - 40205
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||| |||||| |||| | |||||||||||||||| | ||||||    
T  40058 cgggctagccctaacgggtaccaggcttttaagggccgggctaaaaagccctattaaaatacgggct-caatattttaggcccaagccctata-tttatt 40155  T
Q  518 cgggct-ttcgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||   ||||||||| ||| | |||| ||||||||||||||||||||    
T  40156 cgggctaaacgggccggcacattcggcccagcccgttttgacagctctac 40205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 27733 - 27586
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | |||||||| ||||||||| ||||||||||   |||||||||||| |||| | |||| |||||  |||| |||| |||    
T  27733 cgggctagccctaacgggtaccgggcttttaagggccgggcgaaaaagccctattaaaattcgggct-caatattttagacccaaatcctatattt-att 27636  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctctac 566  Q
    ||||||   ||||||||||||||| | |||||||||||||||||||||||    
T  27635 cgggctaaacgggccggcccatacggaccggcccgttttgacagctctac 27586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 56340 - 56195
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | || ||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||| ||||| |||| |||    
T  56340 cgggctagccctaacgggtaccgggattttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaa-ccctatattt-att 56244  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    |||| |   ||||||||||||||| ||| ||||||||||||||||||||    
T  56243 cgggataaacgggccggcccatacggcctggcccgttttgacagctcta 56195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 419 - 485
Target Start/End: Original strand, 231673 - 231739
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggct 485  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||   ||||||||||||    
T  231673 cgggctagccctaacgggtagcaggctttttagggccgggctaaaaagccctattaaaattcgggct 231739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 7785 - 7888
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    ||||| |||||  ||||||| | |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||    
T  7785 cgggcaagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttatt 7882  T
Q  518 cgggct 523  Q
    ||||||    
T  7883 cgggct 7888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 21968 - 22091
Alignment:
Q  442 ggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttattcgggct-ttcgggccggcccata 539  Q
    |||||||| ||||||||||||||||||||   |||||||||||| |||| | |||||||||||||||| | ||||||||||||    ||| || ||||||    
T  21968 ggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagccctata-tttattcgggctaaatgggtcgtcccata 22065  T
Q  540 cagcccggcccgttttgacagctcta 565  Q
    |   ||||||||||||||||||||||    
T  22066 cgtgccggcccgttttgacagctcta 22091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 2122 - 1976
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  ||||||| | ||||| || ||| ||||||||| ||||||   ||||||||| || |||| | |||||||||||||||| |||| |||    
T  2122 cgggctagccctaacgggtaccgggcttataagggtcgggctaaatagccctattaaaattcggact-caatattttaggcccaagccctatattt-att 2025  T
Q  518 cgggcttt-cgggccggcccatacagcccggcccgttttgacagctcta 565  Q
    ||||||   ||||| |||||||||  |||| ||||||||||||||||||    
T  2024 cgggctaaacgggctggcccatacgacccgacccgttttgacagctcta 1976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 573
Target Start/End: Original strand, 10402 - 10488
Alignment:
Q  487 caattattaggcccaagccctacattttattcgggctttcgggccggcccatacagcccggcccgttttgacagctctacctgctgt 573  Q
    ||||| ||| ||||||||||||  ||||||||| |||||| | ||||| |||||||    |||||||||||||||| ||||||||||    
T  10402 caatttttaagcccaagccctatgttttattcgagctttcagaccggctcatacaggttagcccgttttgacagctttacctgctgt 10488  T

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Target: scaffold1318 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 513
Target Start/End: Complemental strand, 1056 - 962
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattt 513  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||| ||||||   |||||||| ||| |||| | |||||||||||||||| ||||    
T  1056 cgggctagccctaacgggtaccgggcttttaagggccgggctaaagagccctattaaaattcgagct-caatattttaggcccaagccctatattt 962  T

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Target: scaffold0360 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 12804 - 12907
Alignment:
Q  419 cgggctagcccggacgggtaacaggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaat-tattaggcccaagccctacattttatt 517  Q
    |||||||||||  | || || |||||||||| |||||| |||||||||||||   |||||||||||| |||| | |||| ||||||||||| | ||||||    
T  12804 cgggctagccctaatggataccaggcttttaagggccgagctaaaaagccctattaaaattcgggct-caatattttagacccaagccctata-tttatt 12901  T
Q  518 cgggct 523  Q
    ||||||    
T  12902 cgggct 12907  T

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