View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4645_high_27 (Length: 237)

Name: NF4645_high_27
Description: NF4645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4645_high_27
NF4645_high_27
[»] chr3 (51 HSPs)
chr3 (1-222)||(45093885-45094108)
chr3 (1-97)||(32951136-32951231)
chr3 (1-81)||(35717870-35717950)
chr3 (1-65)||(32285207-32285271)
chr3 (1-97)||(53066536-53066631)
chr3 (1-68)||(7671341-7671408)
chr3 (1-68)||(36665184-36665251)
chr3 (1-51)||(49058022-49058072)
chr3 (1-51)||(51062556-51062606)
chr3 (1-97)||(4238494-4238589)
chr3 (1-65)||(17053030-17053094)
chr3 (1-65)||(38492217-38492281)
chr3 (1-51)||(37833066-37833116)
chr3 (1-51)||(48706891-48706941)
chr3 (1-65)||(10571175-10571239)
chr3 (1-65)||(21907162-21907226)
chr3 (1-49)||(25097234-25097282)
chr3 (1-65)||(38833829-38833893)
chr3 (1-65)||(47638221-47638285)
chr3 (1-83)||(3547433-3547516)
chr3 (1-51)||(7459865-7459915)
chr3 (12-82)||(15503200-15503270)
chr3 (1-51)||(43138017-43138067)
chr3 (1-51)||(52668531-52668581)
chr3 (1-51)||(54673944-54673994)
chr3 (1-54)||(901052-901105)
chr3 (1-74)||(29728120-29728193)
chr3 (1-54)||(34669650-34669703)
chr3 (1-54)||(36179100-36179153)
chr3 (1-54)||(50673719-50673772)
chr3 (1-65)||(54840159-54840223)
chr3 (1-68)||(48143929-48143996)
chr3 (1-51)||(1327478-1327528)
chr3 (1-51)||(8559050-8559100)
chr3 (1-51)||(18659218-18659268)
chr3 (13-43)||(30080715-30080745)
chr3 (1-54)||(9484638-9484691)
chr3 (1-34)||(10435300-10435333)
chr3 (1-54)||(12948082-12948135)
chr3 (1-38)||(18013434-18013471)
chr3 (1-54)||(29455672-29455725)
chr3 (1-54)||(29793342-29793395)
chr3 (1-54)||(34263668-34263721)
chr3 (4-53)||(39557546-39557595)
chr3 (1-54)||(42098591-42098644)
chr3 (1-54)||(49076390-49076443)
chr3 (1-54)||(53274959-53275012)
chr3 (1-49)||(34555198-34555246)
chr3 (1-49)||(38833929-38833977)
chr3 (1-41)||(44057547-44057587)
chr3 (1-65)||(45167465-45167529)
[»] chr2 (41 HSPs)
chr2 (1-75)||(7106444-7106518)
chr2 (1-97)||(43925074-43925169)
chr2 (1-68)||(332440-332507)
chr2 (1-75)||(4083373-4083447)
chr2 (1-57)||(1110458-1110514)
chr2 (1-97)||(39418020-39418115)
chr2 (1-48)||(38137579-38137626)
chr2 (1-83)||(13399118-13399200)
chr2 (1-51)||(38963685-38963735)
chr2 (1-74)||(42038689-42038762)
chr2 (1-65)||(9877114-9877178)
chr2 (1-97)||(20517584-20517679)
chr2 (1-51)||(18718405-18718455)
chr2 (1-74)||(7442913-7442986)
chr2 (4-65)||(32775934-32775995)
chr2 (3-51)||(16941856-16941904)
chr2 (3-51)||(17012521-17012569)
chr2 (1-39)||(3987289-3987327)
chr2 (1-51)||(41172802-41172852)
chr2 (1-51)||(44283324-44283374)
chr2 (2-51)||(30776245-30776294)
chr2 (1-97)||(42020203-42020299)
chr2 (1-65)||(30708894-30708958)
chr2 (1-65)||(40598295-40598359)
chr2 (1-51)||(14372243-14372293)
chr2 (1-39)||(23671542-23671580)
chr2 (1-83)||(24282973-24283055)
chr2 (1-51)||(34827078-34827128)
chr2 (1-54)||(7724579-7724632)
chr2 (1-54)||(8373476-8373529)
chr2 (1-54)||(8896313-8896366)
chr2 (13-54)||(11277593-11277634)
chr2 (1-54)||(12209031-12209084)
chr2 (1-54)||(38963837-38963890)
chr2 (1-54)||(40471778-40471831)
chr2 (1-74)||(41463539-41463612)
chr2 (1-49)||(16127748-16127796)
chr2 (13-53)||(18733968-18734008)
chr2 (1-49)||(27559741-27559789)
chr2 (1-49)||(41436879-41436927)
chr2 (1-65)||(44330550-44330614)
[»] chr6 (27 HSPs)
chr6 (4-83)||(19068784-19068863)
chr6 (1-82)||(13206967-13207048)
chr6 (1-97)||(16696016-16696111)
chr6 (1-65)||(25163330-25163394)
chr6 (1-65)||(30237333-30237397)
chr6 (1-65)||(8796215-8796279)
chr6 (1-65)||(18992069-18992133)
chr6 (1-55)||(2141609-2141663)
chr6 (1-51)||(7097918-7097968)
chr6 (1-51)||(20662104-20662154)
chr6 (1-39)||(29986215-29986253)
chr6 (1-54)||(6142480-6142533)
chr6 (1-54)||(29514999-29515052)
chr6 (1-65)||(25435577-25435641)
chr6 (13-51)||(3686954-3686992)
chr6 (1-51)||(24150907-24150957)
chr6 (1-51)||(33121708-33121758)
chr6 (1-50)||(643477-643526)
chr6 (13-54)||(9022882-9022923)
chr6 (1-54)||(17496291-17496344)
chr6 (1-54)||(24798519-24798572)
chr6 (1-54)||(24825207-24825260)
chr6 (1-65)||(11114731-11114795)
chr6 (1-49)||(12869387-12869435)
chr6 (1-65)||(22020442-22020506)
chr6 (1-49)||(30699308-30699356)
chr6 (13-41)||(34500928-34500956)
[»] chr8 (37 HSPs)
chr8 (1-83)||(20167590-20167672)
chr8 (1-81)||(10658143-10658223)
chr8 (1-68)||(886097-886164)
chr8 (1-51)||(25256499-25256549)
chr8 (1-51)||(31127850-31127900)
chr8 (1-65)||(18809442-18809506)
chr8 (1-81)||(44123836-44123916)
chr8 (4-82)||(45253915-45253993)
chr8 (1-65)||(6471011-6471075)
chr8 (1-65)||(30380696-30380760)
chr8 (1-75)||(3383574-3383648)
chr8 (1-51)||(13138177-13138227)
chr8 (1-51)||(14847375-14847425)
chr8 (1-65)||(3293132-3293196)
chr8 (1-68)||(12893694-12893761)
chr8 (1-51)||(23249018-23249068)
chr8 (1-51)||(29791108-29791158)
chr8 (1-51)||(30290090-30290140)
chr8 (1-51)||(43066292-43066342)
chr8 (1-54)||(40645651-40645704)
chr8 (1-65)||(8350911-8350975)
chr8 (1-65)||(37710065-37710129)
chr8 (1-49)||(38842210-38842258)
chr8 (1-49)||(38845773-38845821)
chr8 (3-74)||(2986493-2986564)
chr8 (1-51)||(1580810-1580860)
chr8 (4-50)||(2805522-2805568)
chr8 (1-43)||(4327085-4327127)
chr8 (1-51)||(13888596-13888646)
chr8 (4-54)||(21132897-21132947)
chr8 (1-39)||(39361291-39361329)
chr8 (1-46)||(11854691-11854736)
chr8 (1-54)||(25691563-25691616)
chr8 (1-54)||(30464474-30464527)
chr8 (1-65)||(14522546-14522609)
chr8 (1-49)||(20671303-20671351)
chr8 (1-65)||(40013817-40013881)
[»] chr7 (38 HSPs)
chr7 (1-83)||(44389299-44389381)
chr7 (1-82)||(18795154-18795235)
chr7 (2-83)||(31497722-31497803)
chr7 (1-65)||(34478039-34478103)
chr7 (1-65)||(37231594-37231658)
chr7 (1-65)||(47713533-47713597)
chr7 (1-65)||(48531488-48531552)
chr7 (1-65)||(10464146-10464210)
chr7 (1-65)||(21392184-21392248)
chr7 (1-65)||(44479752-44479816)
chr7 (1-73)||(46657799-46657871)
chr7 (1-51)||(32618987-32619037)
chr7 (1-51)||(36819862-36819912)
chr7 (1-65)||(31466389-31466453)
chr7 (1-65)||(35500778-35500842)
chr7 (1-65)||(36643328-36643392)
chr7 (1-51)||(2400451-2400501)
chr7 (1-51)||(7314314-7314364)
chr7 (1-51)||(28185456-28185506)
chr7 (1-39)||(36859265-36859303)
chr7 (1-74)||(33613379-33613451)
chr7 (1-50)||(42493563-42493612)
chr7 (1-65)||(4612118-4612182)
chr7 (1-65)||(19072935-19072999)
chr7 (1-65)||(23474000-23474064)
chr7 (1-65)||(47538089-47538153)
chr7 (16-74)||(22127312-22127370)
chr7 (1-51)||(37950990-37951040)
chr7 (16-74)||(40535551-40535609)
chr7 (1-51)||(42086683-42086733)
chr7 (1-39)||(42834349-42834387)
chr7 (1-51)||(47081146-47081196)
chr7 (1-54)||(16807115-16807168)
chr7 (1-54)||(23348398-23348451)
chr7 (1-50)||(36905692-36905741)
chr7 (1-54)||(38069093-38069146)
chr7 (1-49)||(9173305-9173353)
chr7 (13-53)||(27248826-27248866)
[»] chr1 (39 HSPs)
chr1 (1-83)||(21034542-21034624)
chr1 (1-75)||(3529342-3529416)
chr1 (1-65)||(3898602-3898666)
chr1 (1-65)||(16265199-16265263)
chr1 (1-65)||(16266328-16266392)
chr1 (1-65)||(26441800-26441864)
chr1 (1-81)||(31971402-31971482)
chr1 (1-65)||(43680236-43680300)
chr1 (1-85)||(47222381-47222465)
chr1 (1-51)||(24982517-24982567)
chr1 (1-51)||(38737877-38737927)
chr1 (1-65)||(16751484-16751548)
chr1 (1-65)||(29162009-29162073)
chr1 (1-97)||(37281258-37281353)
chr1 (1-51)||(23569719-23569769)
chr1 (1-75)||(27581042-27581116)
chr1 (1-97)||(4605165-4605260)
chr1 (1-65)||(14075899-14075963)
chr1 (1-65)||(25531944-25532008)
chr1 (1-65)||(38458896-38458960)
chr1 (5-68)||(50481446-50481509)
chr1 (1-51)||(42708666-42708716)
chr1 (1-51)||(50876530-50876580)
chr1 (1-50)||(50539426-50539475)
chr1 (1-65)||(1849867-1849931)
chr1 (1-65)||(30529081-30529145)
chr1 (13-97)||(38737378-38737461)
chr1 (1-43)||(2139002-2139044)
chr1 (1-55)||(26543909-26543963)
chr1 (13-51)||(27990760-27990798)
chr1 (1-51)||(39354309-39354359)
chr1 (1-51)||(52379155-52379205)
chr1 (1-54)||(10100486-10100539)
chr1 (1-54)||(10124151-10124204)
chr1 (1-38)||(36035744-36035781)
chr1 (1-38)||(49903658-49903695)
chr1 (1-65)||(32988380-32988444)
chr1 (2-68)||(48376315-48376378)
chr1 (1-49)||(49805299-49805347)
[»] chr4 (54 HSPs)
chr4 (1-82)||(51736968-51737049)
chr4 (1-81)||(50033186-50033266)
chr4 (4-98)||(23603646-23603739)
chr4 (1-50)||(19525760-19525809)
chr4 (1-97)||(6922940-6923035)
chr4 (1-65)||(18360004-18360068)
chr4 (1-65)||(25644525-25644589)
chr4 (1-65)||(36602860-36602924)
chr4 (1-81)||(50035702-50035782)
chr4 (1-68)||(39194078-39194145)
chr4 (1-65)||(4209525-4209589)
chr4 (1-65)||(6494756-6494820)
chr4 (1-65)||(39260163-39260227)
chr4 (1-65)||(55190597-55190661)
chr4 (1-51)||(19170584-19170634)
chr4 (1-51)||(28152157-28152207)
chr4 (1-51)||(28166440-28166490)
chr4 (1-51)||(46803798-46803848)
chr4 (1-51)||(47278322-47278372)
chr4 (1-74)||(4264300-4264373)
chr4 (1-65)||(3443418-3443482)
chr4 (1-65)||(5123188-5123252)
chr4 (1-65)||(7738850-7738914)
chr4 (4-75)||(19652277-19652348)
chr4 (1-44)||(53568517-53568560)
chr4 (1-51)||(3442389-3442439)
chr4 (1-51)||(3901184-3901234)
chr4 (1-51)||(20678633-20678683)
chr4 (1-51)||(26205749-26205799)
chr4 (1-54)||(3708295-3708348)
chr4 (1-68)||(19631474-19631542)
chr4 (1-65)||(45198371-45198435)
chr4 (1-65)||(46212381-46212445)
chr4 (4-51)||(19633894-19633941)
chr4 (1-51)||(5735437-5735487)
chr4 (1-51)||(10181153-10181203)
chr4 (1-51)||(18881325-18881375)
chr4 (1-51)||(19731211-19731261)
chr4 (1-75)||(23256101-23256175)
chr4 (1-39)||(37688090-37688128)
chr4 (1-51)||(47579452-47579502)
chr4 (1-51)||(49768611-49768661)
chr4 (1-51)||(55997277-55997327)
chr4 (13-54)||(8525396-8525437)
chr4 (2-51)||(21858964-21859013)
chr4 (2-51)||(21914827-21914876)
chr4 (1-54)||(31152703-31152756)
chr4 (1-54)||(43447207-43447260)
chr4 (2-51)||(48336648-48336697)
chr4 (1-54)||(53987748-53987801)
chr4 (1-65)||(1377198-1377261)
chr4 (1-49)||(5744130-5744178)
chr4 (1-49)||(47834112-47834160)
chr4 (1-49)||(48380520-48380568)
[»] chr5 (42 HSPs)
chr5 (1-83)||(2864120-2864202)
chr5 (1-51)||(25563666-25563716)
chr5 (4-97)||(37843575-37843667)
chr5 (1-65)||(4299864-4299928)
chr5 (1-65)||(16048251-16048315)
chr5 (1-65)||(22613740-22613804)
chr5 (1-65)||(39405930-39405994)
chr5 (1-68)||(19087644-19087711)
chr5 (1-68)||(41411185-41411252)
chr5 (1-51)||(19868731-19868781)
chr5 (1-51)||(43517105-43517155)
chr5 (4-65)||(14475261-14475322)
chr5 (1-65)||(970304-970368)
chr5 (1-65)||(35290452-35290516)
chr5 (1-65)||(37516311-37516375)
chr5 (1-65)||(39036576-39036640)
chr5 (1-65)||(39894947-39895011)
chr5 (1-68)||(1830821-1830888)
chr5 (1-82)||(30779760-30779841)
chr5 (1-65)||(5212953-5213017)
chr5 (1-65)||(5364590-5364654)
chr5 (1-65)||(32002045-32002109)
chr5 (1-65)||(43067387-43067451)
chr5 (1-68)||(40316288-40316355)
chr5 (1-51)||(4924883-4924933)
chr5 (1-51)||(23988743-23988793)
chr5 (1-51)||(42148473-42148523)
chr5 (1-49)||(33402560-33402608)
chr5 (1-65)||(40512711-40512775)
chr5 (1-44)||(15268559-15268602)
chr5 (33-75)||(15268602-15268644)
chr5 (13-51)||(25773387-25773425)
chr5 (1-51)||(35448042-35448092)
chr5 (1-54)||(1098217-1098270)
chr5 (1-54)||(13548255-13548308)
chr5 (1-54)||(14057750-14057803)
chr5 (1-54)||(20022902-20022955)
chr5 (1-54)||(20040384-20040437)
chr5 (1-50)||(29627434-29627483)
chr5 (1-54)||(41263098-41263151)
chr5 (13-53)||(21961405-21961445)
chr5 (1-49)||(30788252-30788300)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-65)||(12918-12982)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-65)||(10559-10623)
scaffold0366 (1-65)||(14225-14289)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-51)||(117487-117537)
[»] scaffold0111 (1 HSPs)
scaffold0111 (5-85)||(38243-38323)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-51)||(44153-44203)
[»] scaffold0604 (1 HSPs)
scaffold0604 (1-38)||(1280-1317)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-51)||(41262-41312)
[»] scaffold0340 (1 HSPs)
scaffold0340 (4-65)||(14507-14568)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-54)||(5418-5471)
[»] scaffold0204 (1 HSPs)
scaffold0204 (2-51)||(24170-24219)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-54)||(184008-184061)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-65)||(15247-15311)


Alignment Details
Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 45093885 - 45094108
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg-ttttttgtcaaataaatcatccattgaggaaacggagggagtaga 99  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||  ||||||||||||||    
T  45093885 ttatcgttgtgaattagtagaaaaatatgatcaaaatatgttaagtcaatattgtttttttgtcaaataaatcat-cattgagg-gacggagggagtaga 45093982  T
Q  100 atttttcatggaaaatgtgtatnnnnnnnntacagctcaaactttta----ggagtgcacataacataacatgaggttgaaacgttacagagcaaccaac 195  Q
    ||||||||||||||||||||||        |||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45093983 atttttcatggaaaatgtgtat-aaaaaaatacagctcaaacttttattagggagtgcacataacataacatgaggttgaaacgttacagagcaaccaac 45094081  T
Q  196 caagcaccgtttcccaatatgaagctg 222  Q
    |||||||||||||||||||||||||||    
T  45094082 caagcaccgtttcccaatatgaagctg 45094108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32951231 - 32951136
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | ||||||| || |||||  |||||||  ||||||||||||    
T  32951231 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactagatcatttattgagg-gacggagggagta 32951136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35717950 - 35717870
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattga 81  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||  ||||| |||||    
T  35717950 ttatctttgtgaattagtagaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaaatacgtcatctattga 35717870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32285271 - 32285207
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| | |||||||    
T  32285271 ttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaa 32285207  T

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Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 53066536 - 53066631
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| | | | ||||||| || |||||| ||| |||  ||||||||||||    
T  53066536 ttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagg-gacggagggagta 53066631  T

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Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7671408 - 7671341
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    |||||||||||| ||| |||||||||||  |||||  |||||||||||||||||||||||||||||||    
T  7671408 ttatctttgtgagttaatagaaaaatattgtcaaaacatgttaagtcaatattgttttttgtcaaata 7671341  T

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Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 36665184 - 36665251
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| |||| ||| | ||||||||||    
T  36665184 ttatctttgtgaattagtagaaaaatatagtcaaagtatgttaagttaataatgtatattgtcaaata 36665251  T

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Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49058022 - 49058072
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||    
T  49058022 ttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaata 49058072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51062556 - 51062606
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  51062556 ttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaata 51062606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4238589 - 4238494
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||| |||| ||| | ||||||| ||| ||||  |||||||  ||||||||||||    
T  4238589 ttatctttgtgaattagtggaaaaatatggtcaaagtatattaagttaataatgtatattgtcaactaagtcatttattgagg-gacggagggagta 4238494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17053030 - 17053094
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||| | |||||||    
T  17053030 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaa 17053094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38492217 - 38492281
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||||| ||| | |||||||    
T  38492217 ttatctttgtaaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaa 38492281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37833066 - 37833116
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  37833066 ttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaata 37833116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48706941 - 48706891
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  48706941 ttatctttgtgaattagtagaaaagtatgatcaaaatatgtcaagtcaata 48706891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10571239 - 10571175
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| |||||||| ||||||||| ||||||||||| ||||||||| ||| | |||||||    
T  10571239 ttatctttgtaaattagtataaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 10571175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21907162 - 21907226
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  21907162 ttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 21907226  T

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Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25097282 - 25097234
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  25097282 ttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaa 25097234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38833829 - 38833893
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||| ||||| ||||||||| ||| | |||||||    
T  38833829 ttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaa 38833893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47638221 - 47638285
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||| ||| | |||||||    
T  47638221 ttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaa 47638285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3547516 - 3547433
Alignment:
Q  1 ttatctttgtgaattagtagaaaaa-tatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgagg 83  Q
    ||||| ||||||| ||||| ||||| |||| ||||||||||||||||||||| ||| | ||||||||||  ||||| |||||||    
T  3547516 ttatcattgtgaaatagtaaaaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaaataggtcatctattgagg 3547433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7459915 - 7459865
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  7459915 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 7459865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 15503200 - 15503270
Alignment:
Q  12 aattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgag 82  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||| | || |||| || |||||| ||||||    
T  15503200 aattagtagaaaaataagatcaaagtatattaagtcaataatgtatattatcaactagatcatctattgag 15503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43138017 - 43138067
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  43138017 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 43138067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52668581 - 52668531
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  52668581 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 52668531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 54673944 - 54673994
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||| ||||||||||||||||||||||||||| || || ||||||    
T  54673944 ttatctttgttaattagtagaaaaatatgatcaaagtacgtcaaatcaata 54673994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 901052 - 901105
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  |||||||||||||||||||||||||| |||| ||||| ||||    
T  901052 ttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattg 901105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29728193 - 29728120
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcat 74  Q
    |||||||||||||||||||||||| |||| ||||| ||| | ||||||||| ||| | ||||||| || |||||    
T  29728193 ttatctttgtgaattagtagaaaagtatggtcaaaatatctcaagtcaataatgtatattgtcaactagatcat 29728120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34669703 - 34669650
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  |||||||||||||||||||||||||| |||| ||||| ||||    
T  34669703 ttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattg 34669650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36179100 - 36179153
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||||||||||||  ||||||||| ||||    
T  36179100 ttatctttgtatattagtagaaaaatatgatcaaagtaaattaagtcaaaattg 36179153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50673772 - 50673719
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||||||||| ||||    
T  50673772 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaattg 50673719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 54840223 - 54840159
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| | || ||||||||||| ||||||||| ||| | |||||||    
T  54840223 ttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 54840159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48143929 - 48143996
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    |||||||||| |||||||||||||||||| ||||| ||| ||| ||||||| | | | ||||||||||    
T  48143929 ttatctttgtaaattagtagaaaaatatggtcaaaatatattatgtcaataatatatattgtcaaata 48143996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1327478 - 1327528
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||| ||||||||||||| |||| ||||||||| | |||||||||    
T  1327478 ttatctttgtaaattagtagaaaagtatggtcaaagtatatcaagtcaata 1327528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8559100 - 8559050
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||  |||| ||||||||| | |||||||||    
T  8559100 ttatctttgtgaattagtagaaatgtatggtcaaagtatatcaagtcaata 8559050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18659218 - 18659268
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||| ||||||||||||||| |||| ||||||||| | |||||||||    
T  18659218 ttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaata 18659268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 30080715 - 30080745
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgtta 43  Q
    |||||||||||||||||||||||||||||||    
T  30080715 attagtagaaaaatatgatcaaagtatgtta 30080745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9484691 - 9484638
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  9484691 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 9484638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 10435300 - 10435333
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaa 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  10435300 ttatctttgtgaattagtagaaaaatatggtcaa 10435333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12948135 - 12948082
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  12948135 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 12948082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18013434 - 18013471
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagta 38  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  18013434 ttatctttgtatattagtagaaaaatatgatcaaagta 18013471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29455672 - 29455725
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  29455672 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 29455725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29793342 - 29793395
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  29793342 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 29793395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34263668 - 34263721
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  34263668 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 34263721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 39557546 - 39557595
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatatt 53  Q
    |||||||| ||||||||||||||||| || |||||||||| || ||||||    
T  39557546 tctttgtgcattagtagaaaaatatggtctaagtatgttatgtgaatatt 39557595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42098591 - 42098644
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  42098591 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 42098644  T

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Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49076390 - 49076443
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  49076390 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 49076443  T

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Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 53274959 - 53275012
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||||||||| || |||| ||||| ||||    
T  53274959 ttatctttgtatattagtagaaaaatatgatcaaaataagttaggtcaaaattg 53275012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34555246 - 34555198
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||||    
T  34555246 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 34555198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38833929 - 38833977
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||||    
T  38833929 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 38833977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44057547 - 44057587
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgt 41  Q
    ||||||||||  ||||||||||||| |||||||||||||||    
T  44057547 ttatctttgtatattagtagaaaaacatgatcaaagtatgt 44057587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45167465 - 45167529
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| | || ||||| ||||| ||||||||| ||| | |||||||    
T  45167465 ttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaa 45167529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 7106444 - 7106518
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatc 75  Q
    ||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| | ||||||    
T  7106444 ttatctttgtgaattagtagaaaaatatgattagagtatgttaactcaatattgttttttgtcaaagagatcatc 7106518  T

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Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 43925169 - 43925074
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | || |||||||  || || |||||||  ||||||||||||    
T  43925169 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaataatgtatattatcaaataggtcgtctattgagg-gacggagggagta 43925074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 332440 - 332507
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| | ||||||||||    
T  332440 ttatctttgtgaattagtaaaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaaata 332507  T

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Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4083373 - 4083447
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatc 75  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||||| ||| | |||||||||| ||||||    
T  4083373 ttatctttgtgatttagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaaatagatcatc 4083447  T

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Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1110458 - 1110514
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttt 57  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  1110458 ttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgttt 1110514  T

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Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39418115 - 39418020
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    |||||||||||||||||||||||||| |  ||||||||||| ||||||||| ||| | ||||||| ||| ||||||||| | || ||||||||||||    
T  39418115 ttatctttgtgaattagtagaaaaatgtagtcaaagtatgtcaagtcaataatgtatattgtcaactaagtcatccatt-aagagacggagggagta 39418020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38137626 - 38137579
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtca 48  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38137626 ttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtca 38137579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 13399200 - 13399118
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgagg 83  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||||||| ||| | ||||||| || |||||| |||||||    
T  13399200 ttatctttgtaaattagtagaaaaatatggttaaagaatgttaagtcaataatgtatattgtcaactagatcatctattgagg 13399118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38963685 - 38963735
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||    
T  38963685 ttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaata 38963735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42038689 - 42038762
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcat 74  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||| | ||||||| | ||||||    
T  42038689 ttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgaatcat 42038762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9877178 - 9877114
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||| | |||||||    
T  9877178 ttatctttgtgaattagtaaaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 9877114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20517584 - 20517679
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||||||||| ||  | ||||||| ||| ||||  ||| ||| |||||||||||||    
T  20517584 ttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagg-aacggagggagta 20517679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18718405 - 18718455
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  18718405 ttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaata 18718455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7442986 - 7442913
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcat 74  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||||||| ||| | ||||||| || |||||    
T  7442986 ttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactagatcat 7442913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 32775995 - 32775934
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||||||| ||| | |||||||    
T  32775995 tcttagtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 32775934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 16941904 - 16941856
Alignment:
Q  3 atctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||| |||||||||||||| | |||||||||    
T  16941904 atctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaata 16941856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 17012569 - 17012521
Alignment:
Q  3 atctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||| |||||||||||||| | |||||||||    
T  17012569 atctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaata 17012521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3987327 - 3987289
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtat 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  3987327 ttatctttgtgaattagtagaaaaatatggtcaaagtat 3987289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41172852 - 41172802
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||| ||||||| |||||||||||||| | |||||||||    
T  41172852 ttatctttgtgaattaatagaaaagtatgatcaaagtatatcaagtcaata 41172802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44283374 - 44283324
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  44283374 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 44283324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 30776294 - 30776245
Alignment:
Q  2 tatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||| |||||||||||||||||  ||||||||||| |||||||||    
T  30776294 tatctttgtaaattagtagaaaaatattgtcaaagtatgtcaagtcaata 30776245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42020299 - 42020203
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatc-aaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    |||| ||||||||||||||||| |||||| || |||||||||||| |||||| ||| | ||||||||||  | ||| |||||||  ||||||||||||    
T  42020299 ttatatttgtgaattagtagaataatatggtctaaagtatgttaaatcaataatgtatattgtcaaataggttatctattgagg-gacggagggagta 42020203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30708894 - 30708958
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| |||||||||||||||||| ||||| ||| | ||||||||| ||| | |||||||    
T  30708894 ttatctttgtaaattagtagaaaaatatggtcaaaatatatcaagtcaataatgtatattgtcaa 30708958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40598295 - 40598359
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||| |||||||||||| ||||||||| |||| | |||| ||| | |||||||    
T  40598295 ttatctttgtgaattattagaaaaatatggtcaaagtatattaaattaataatgtatattgtcaa 40598359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14372243 - 14372293
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||| ||||||||||||||||||| |||| ||||||||| | |||||||||    
T  14372243 ttatatttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 14372293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23671542 - 23671580
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtat 39  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  23671542 ttatctttgtgaattagtagaaaagtatggtcaaagtat 23671580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24283055 - 24282973
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgagg 83  Q
    ||||||||||||||||||| ||||||||  ||||| ||||| || |||||| | | | ||||||| || |||||| |||||||    
T  24283055 ttatctttgtgaattagtaaaaaaatatagtcaaaatatgtcaaatcaataatatatattgtcaactagatcatctattgagg 24282973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34827078 - 34827128
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||| |||| | || ||||||||||| |||||||||    
T  34827078 ttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaata 34827128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7724579 - 7724632
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  7724579 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 7724632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8373529 - 8373476
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  8373529 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 8373476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8896366 - 8896313
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  8896366 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 8896313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 11277634 - 11277593
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  11277634 attagtagaaaaatatgatcaaagtaagttatgtcaaaattg 11277593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12209084 - 12209031
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  12209084 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 12209031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38963890 - 38963837
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  38963890 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 38963837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40471831 - 40471778
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||| ||||||||||||||| || |||||||||| ||||    
T  40471831 ttatctttgtatattagtaaaaaaatatgatcaaaataagttaagtcaaaattg 40471778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41463612 - 41463539
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcat 74  Q
    |||||||||| ||||||||||||||| || | ||||||||| || |||||| ||| | ||||||| || |||||    
T  41463612 ttatctttgtaaattagtagaaaaatgtggtgaaagtatgtcaaatcaataatgtatattgtcaactagatcat 41463539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16127748 - 16127796
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  |||||| ||||||||||||||||||| |||| |||||    
T  16127748 ttatctttgtatattagtggaaaaatatgatcaaagtaagttaggtcaa 16127796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 18734008 - 18733968
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgttaagtcaatatt 53  Q
    |||||||||||||||  |||||| |||||||||||||||||    
T  18734008 attagtagaaaaatacaatcaaaatatgttaagtcaatatt 18733968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27559741 - 27559789
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||||||||||| |||| | || ||||||||||| |||||||    
T  27559741 ttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaa 27559789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41436927 - 41436879
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||||    
T  41436927 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 41436879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44330550 - 44330614
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| | || | ||||||||| ||||||||| ||| | |||||||    
T  44330550 ttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaa 44330614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 19068863 - 19068784
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgagg 83  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| ||  |||||||||||| |||||| |||||||    
T  19068863 tctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgcattttgtcaaatagatcatctattgagg 19068784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13207048 - 13206967
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgag 82  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||  || | ||||||||||  ||||| ||||||    
T  13207048 ttatctttgtgaattagtagaaaaatatggtcaaagaatgttaagtcaataaagtatattgtcaaataggtcatctattgag 13206967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16696111 - 16696016
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||| | ||||||| ||  ||||| |||||||  ||||||||||||    
T  16696111 ttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaatgatgtatattgtcaactaggtcatctattgagg-gacggagggagta 16696016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25163330 - 25163394
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  25163330 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 25163394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30237333 - 30237397
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| | |||||||    
T  30237333 ttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 30237397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8796215 - 8796279
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||| ||| | |||||||    
T  8796215 ttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaa 8796279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18992069 - 18992133
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  18992069 ttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 18992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2141663 - 2141609
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgt 55  Q
    ||||||||||  |||||||||||||||||||||||||| |||| ||||| |||||    
T  2141663 ttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgt 2141609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7097968 - 7097918
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||| |||||||||| |||| |||| |||||||||||||||||||||    
T  7097968 ttatctttatgaattagtataaaagtatggtcaaagtatgttaagtcaata 7097918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20662154 - 20662104
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  20662154 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 20662104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29986253 - 29986215
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtat 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  29986253 ttatctttgtgaattagtagaaaaatatggtcaaagtat 29986215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6142480 - 6142533
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  |||||||||||||||||||||||||| |||| ||||| ||||    
T  6142480 ttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattg 6142533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29514999 - 29515052
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  |||||||||||||||||||||||||| |||| ||||| ||||    
T  29514999 ttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattg 29515052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25435577 - 25435641
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| |||| ||||||||||| || |||||| ||| | |||||||    
T  25435577 ttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaa 25435641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 3686954 - 3686992
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  3686954 attaatagaaaaatatgatcaaagtatgttaggtcaata 3686992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24150907 - 24150957
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||| ||||||| |||| ||||||||| | |||||||||    
T  24150907 ttatctttgtgaattaatagaaaagtatggtcaaagtatatcaagtcaata 24150957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33121708 - 33121758
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||| |||||||||||||||||||| ||||||||  | |||||||||    
T  33121708 ttatctttatgaattagtagaaaaatatggtcaaagtacatcaagtcaata 33121758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 643526 - 643477
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaat 50  Q
    |||||||||||| |||||| |||| |||| ||||||||||| ||||||||    
T  643526 ttatctttgtgacttagtataaaagtatggtcaaagtatgtcaagtcaat 643477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 9022923 - 9022882
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||    
T  9022923 attagtagaaaaatatggtcaaagtatgttaggtcaaaattg 9022882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17496291 - 17496344
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  17496291 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 17496344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24798519 - 24798572
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  24798519 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 24798572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24825260 - 24825207
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  24825260 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 24825207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11114731 - 11114795
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| |||| ||||| ||||| || |||||| ||| | |||||||    
T  11114731 ttatctttgtgaattagtataaaagtatggtcaaaatatgtcaaatcaataatgtatattgtcaa 11114795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12869387 - 12869435
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  ||||||||||||||||| ||||| ||||| |||||||    
T  12869387 ttatctttgtatattagtagaaaaatatggtcaaactatgtcaagtcaa 12869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22020442 - 22020506
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| | || | ||||||||| ||||||||| ||| | |||||||    
T  22020442 ttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaa 22020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30699356 - 30699308
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||||    
T  30699356 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 30699308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 34500956 - 34500928
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgt 41  Q
    |||||||||||||||||||||||||||||    
T  34500956 attagtagaaaaatatgatcaaagtatgt 34500928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 20167672 - 20167590
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgagg 83  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||| |||||| |||||||    
T  20167672 ttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaaatagatcatctattgagg 20167590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10658143 - 10658223
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattga 81  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||| |||||| |||||    
T  10658143 ttatatttgttaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaaatagatcatctattga 10658223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 886164 - 886097
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| | ||||||||||    
T  886164 ttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagttaataatgtatattgtcaaata 886097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25256499 - 25256549
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25256499 ttatctttgtaaattagtagaaaaatatgatcaaagtatgttaagtcaata 25256549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31127900 - 31127850
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31127900 ttatctttgtgaattagtagaaaaatatgatcaaagtatattaagtcaata 31127850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18809442 - 18809506
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  18809442 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 18809506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44123836 - 44123916
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattga 81  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| | ||| | ||||||||||  ||||| |||||    
T  44123836 ttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatctattga 44123916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 45253915 - 45253993
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgag 82  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| ||| | ||||||| ||  ||||| ||||||    
T  45253915 tctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattgag 45253993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6471011 - 6471075
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||| | |||||||    
T  6471011 ttatctttatgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaa 6471075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30380696 - 30380760
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  30380696 ttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 30380760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3383574 - 3383648
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatc 75  Q
    ||||||||||||||||||  ||||||||||||| ||||| ||||||||||| | | | |||||||||| ||||||    
T  3383574 ttatctttgtgaattagtgaaaaaatatgatcacagtatattaagtcaataatatatattgtcaaatatatcatc 3383648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13138227 - 13138177
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  13138227 ttatctttgtgaattagtagaaaaatatggtcaaaatatgtcaagtcaata 13138177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14847375 - 14847425
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  14847375 ttatctttgtgaattagtagaaaaatatggtcaaagtatgtaaagttaata 14847425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3293196 - 3293132
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  3293196 ttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 3293132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12893694 - 12893761
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    |||||||||| ||||  |||||||||||| ||||||||||||||||||||| ||  | ||||||||||    
T  12893694 ttatctttgtaaattgatagaaaaatatggtcaaagtatgttaagtcaataatgcatattgtcaaata 12893761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23249018 - 23249068
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  23249018 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 23249068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29791108 - 29791158
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  29791108 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 29791158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30290090 - 30290140
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  30290090 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 30290140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43066292 - 43066342
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  43066292 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 43066342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40645704 - 40645651
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  |||||||||||||||||||||||||| |||| ||||| ||||    
T  40645704 ttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattg 40645651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8350975 - 8350911
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||| | ||||| |||||||||||| ||||||||||| ||||||||| ||| | |||||||    
T  8350975 ttatctttctaaattaatagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 8350911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37710065 - 37710129
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| | || ||||||||||| ||||||||| ||| | |||||||    
T  37710065 ttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 37710129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38842258 - 38842210
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  38842258 ttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaa 38842210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38845773 - 38845821
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||||||||||| |||||| || ||||||||||| |||||||    
T  38845773 ttatctttgtgaattagtataaaaatgtggtcaaagtatgtcaagtcaa 38845821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 2986493 - 2986564
Alignment:
Q  3 atctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcat 74  Q
    |||||||| ||||||||||||| |||| ||||| ||||| ||||||||| ||| | ||||||| ||| ||||    
T  2986493 atctttgtaaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactaagtcat 2986564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1580860 - 1580810
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||| ||||||||||||| |||| ||||||||||| || ||||||    
T  1580860 ttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaactcaata 1580810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 2805568 - 2805522
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaat 50  Q
    ||||||||||||||||||||| |||| ||||||||| | ||||||||    
T  2805568 tctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaat 2805522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4327085 - 4327127
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgtta 43  Q
    ||||||||||  |||||||||||||||||||||||||| ||||    
T  4327085 ttatctttgtatattagtagaaaaatatgatcaaagtaagtta 4327127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13888596 - 13888646
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||  ||||||||||||||| | |||||||||||||| ||||||    
T  13888596 ttatctttgtatattagtagaaaaatacggtcaaagtatgttaaatcaata 13888646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 21132897 - 21132947
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    |||||||  ||||||||||||||||| |||||||| |||||||||| ||||    
T  21132897 tctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaattg 21132947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39361291 - 39361329
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtat 39  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  39361291 ttatctttgtgaattaatagaaaagtatgatcaaagtat 39361329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11854691 - 11854736
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagt 46  Q
    ||||||||||||||||||||||||||||| | || |||| ||||||    
T  11854691 ttatctttgtgaattagtagaaaaatatggttaaggtatattaagt 11854736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25691563 - 25691616
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  25691563 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 25691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30464527 - 30464474
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  30464527 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 30464474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14522546 - 14522609
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| ||||||||||||| |||| ||||||||| | ||||||||| ||| | |||||||    
T  14522546 ttatctttgt-aattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaa 14522609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20671351 - 20671303
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||||    
T  20671351 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 20671303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40013817 - 40013881
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||| ||||||||||| || |||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  40013817 ttatatttgtgaattaatataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 40013881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44389381 - 44389299
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgagg 83  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||| |||||| |||||||    
T  44389381 ttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaaatagatcatctattgagg 44389299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18795235 - 18795154
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgag 82  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| | | | ||||||||||| | ||| ||||||    
T  18795235 ttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaaataagtgatctattgag 18795154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 31497803 - 31497722
Alignment:
Q  2 tatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgagg 83  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||| | ||||||||||| ||||  |||||||    
T  31497803 tatctttgtgaattagtagaaaaatatggtcaaattatattaagtcaataatgtatattgtcaaataagtcatgtattgagg 31497722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34478103 - 34478039
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| | |||||||    
T  34478103 ttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaa 34478039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37231658 - 37231594
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  37231658 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 37231594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 47713597 - 47713533
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| | |||||||    
T  47713597 ttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 47713533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 48531488 - 48531552
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| | |||||||    
T  48531488 ttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 48531552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10464210 - 10464146
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  10464210 ttatctttatgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 10464146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21392184 - 21392248
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| |||| ||| | |||||||    
T  21392184 ttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagttaataatgtatattgtcaa 21392248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44479816 - 44479752
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  44479816 ttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 44479752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 46657799 - 46657871
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatca 73  Q
    |||||||||| ||||| |||||||||||| |||||| |||||||||||||| ||| | |||||||||| ||||    
T  46657799 ttatctttgtaaattaatagaaaaatatggtcaaagaatgttaagtcaataatgtatgttgtcaaatagatca 46657871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32619037 - 32618987
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  32619037 ttatctttgtgaattagtagaaaagtatgatcaaagtatataaagtcaata 32618987  T

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Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36819862 - 36819912
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  36819862 ttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaata 36819912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31466453 - 31466389
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  31466453 ttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 31466389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35500842 - 35500778
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||| |||||||||||||||||||  ||||||||| ||||||||||| ||| | |||||||    
T  35500842 ttatctttatgaattagtagaaaaatatagtcaaagtatcttaagtcaataatgtatattgtcaa 35500778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36643328 - 36643392
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||| |||||||||| ||||||||| |||| |||||| ||| | |||||||    
T  36643328 ttatctttgtgaattagtggaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaa 36643392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2400451 - 2400501
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  2400451 ttatctttgtgaattagtagaaaagtatggtcaaagtatataaagtcaata 2400501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7314314 - 7314364
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||  ||||||||||||||||| ||||||||||||| |||||||    
T  7314314 ttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaata 7314364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28185506 - 28185456
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  28185506 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 28185456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36859303 - 36859265
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtat 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  36859303 ttatctttgtgaattagtagaaaaatatggtcaaagtat 36859265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33613379 - 33613451
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcat 74  Q
    |||| |||||||||||||| ||||||||| ||||| ||| ||||||||||| ||| | | ||||||||||||||    
T  33613379 ttatttttgtgaattagtaaaaaaatatggtcaaa-tatattaagtcaataatgtatatggtcaaataaatcat 33613451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42493612 - 42493563
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaat 50  Q
    ||||||||||  ||||||||||||||||| ||||||||||||| ||||||    
T  42493612 ttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaat 42493563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4612182 - 4612118
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| | || ||||||||||| ||||||||| ||| | |||||||    
T  4612182 ttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 4612118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19072935 - 19072999
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| |||| ||||||||||| || |||||| ||| | |||||||    
T  19072935 ttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaa 19072999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23474064 - 23474000
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| ||||||||| ||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  23474064 ttatctttgtaaattagtaggaaagtatggtcaaagtatgtaaagtcaataatgtatattgtcaa 23474000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47538089 - 47538153
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| |||| |||||| ||||| ||| ||| | |||||||    
T  47538089 ttatctttgtgaattagtagaaaagtatggtcaaggtatgtcaagtccataatgtatattgtcaa 47538153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22127312 - 22127370
Alignment:
Q  16 agtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcat 74  Q
    ||||||||||| |||||||||||||||| ||||||||| |   |||||||||| |||||    
T  22127312 agtagaaaaatgtgatcaaagtatgttaggtcaatattatacattgtcaaatagatcat 22127370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37951040 - 37950990
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||| |||| |||||||||| ||| | |||||||||    
T  37951040 ttatctttgtgaattagtaaaaaagtatgatcaaaatatatcaagtcaata 37950990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 40535609 - 40535551
Alignment:
Q  16 agtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcat 74  Q
    ||||||||||| |||||||||||||||| ||||||||| |   |||||||||| |||||    
T  40535609 agtagaaaaatgtgatcaaagtatgttaggtcaatattatacattgtcaaatagatcat 40535551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42086733 - 42086683
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||| ||| | |||||||||    
T  42086733 ttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaata 42086683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42834387 - 42834349
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtat 39  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  42834387 ttatctttgtgaattagtagaaaagtatggtcaaagtat 42834349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47081146 - 47081196
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||| |||||||||||| |||| ||||||||| | |||||||||    
T  47081146 ttatctttgtggattagtagaaaagtatggtcaaagtatatcaagtcaata 47081196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16807115 - 16807168
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  16807115 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 16807168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23348451 - 23348398
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||| ||||||||| |||||||||||||  |||||||||    
T  23348451 ttatctttgtatattagtaaaaaaatatggtcaaagtatgttagttcaatattg 23348398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36905692 - 36905741
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaat 50  Q
    ||||||||||||||||||| |||| |||  ||||||||||| ||||||||    
T  36905692 ttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 36905741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38069146 - 38069093
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  38069146 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 38069093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9173305 - 9173353
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||||    
T  9173305 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 9173353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 27248826 - 27248866
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgttaagtcaatatt 53  Q
    |||||||||||||| ||||||||||||||||  ||||||||    
T  27248826 attagtagaaaaatctgatcaaagtatgttagttcaatatt 27248866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21034624 - 21034542
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgagg 83  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| | |||||||||| || ||| |||||||    
T  21034624 ttatctttgtgatttagtagaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaaatagattatctattgagg 21034542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3529342 - 3529416
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatc 75  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||| | | | ||||||||||| |||||    
T  3529342 ttatctttatgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaaataagtcatc 3529416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3898666 - 3898602
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  3898666 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 3898602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16265199 - 16265263
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  16265199 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 16265263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16266328 - 16266392
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  16266328 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 16266392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26441800 - 26441864
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  26441800 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 26441864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31971482 - 31971402
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattga 81  Q
    |||||||||| |||||||||||||||||||||||| |||||||| | |||| | | | ||||||||||||| |||||||||    
T  31971482 ttatctttgttaattagtagaaaaatatgatcaaaatatgttaaattaataatatatattgtcaaataaattatccattga 31971402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43680236 - 43680300
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  43680236 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 43680300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 47222381 - 47222465
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaa 85  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| | || |||||||  ||||  |||||||||    
T  47222381 ttatctttgtgaattagtaaaaaaatatggtcaaagtatgttaagtcaataatgtatattatcaaataggtcatttattgaggaa 47222465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24982517 - 24982567
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  24982517 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaata 24982567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38737927 - 38737877
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  38737927 ttatctttgtgaattagtagaaaaatatgattaaagtatgttaaatcaata 38737877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16751548 - 16751484
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||| ||| | |||||||    
T  16751548 ttatctttgtgaattagtaaaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaa 16751484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29162009 - 29162073
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||||| ||| | |||||||    
T  29162009 ttatctttgtgaattagtagaaaagtatgatcaaagtatctcaagtcaataatgtatattgtcaa 29162073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37281258 - 37281353
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||| | | | ||||||| || |||||| ||| |||  ||||||||||||    
T  37281258 ttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagg-gacggagggagta 37281353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23569769 - 23569719
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| |||||||| || |||||||||    
T  23569769 ttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaata 23569719  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27581042 - 27581116
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatc 75  Q
    ||||||||||  |||| |||||||||||||||||||||||||| ||||| |||   | |||||||||||||||||    
T  27581042 ttatctttgtatattattagaaaaatatgatcaaagtatgttaggtcaaaattacatattgtcaaataaatcatc 27581116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 4605165 - 4605260
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    |||||||||||||||| ||| ||||||||  |||||||||| ||||||||| ||| | ||||||||||  ||||| ||| |||  ||||||||||||    
T  4605165 ttatctttgtgaattaataggaaaatatggccaaagtatgtaaagtcaataatgtatattgtcaaataggtcatctattaagg-gacggagggagta 4605260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14075899 - 14075963
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||| |||||||||||||||||||||||| | ||| ||||||||||||||| ||| | |||||||    
T  14075899 ttatatttgtgaattagtagaaaaatatggttaaaatatgttaagtcaataatgtatattgtcaa 14075963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25531944 - 25532008
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||||||| | ||||||||| ||| | |||||||    
T  25531944 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaa 25532008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38458896 - 38458960
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  38458896 ttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 38458960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 50481446 - 50481509
Alignment:
Q  5 ctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    ||||||||||||||||||||| ||  ||||||||||||| ||||||| ||| | ||||||||||    
T  50481446 ctttgtgaattagtagaaaaaaattgtcaaagtatgttaggtcaataatgtatattgtcaaata 50481509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42708666 - 42708716
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  42708666 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 42708716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50876530 - 50876580
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  50876530 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 50876580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 50539426 - 50539475
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaat 50  Q
    ||||||||||||||||||| |||| |||| ||||||||||| ||||||||    
T  50539426 ttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaat 50539475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1849867 - 1849931
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||| ||||||||||||||||||| | || ||||||||||| ||||||||| ||| | |||||||    
T  1849867 ttatttttgtgaattagtagaaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 1849931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30529145 - 30529081
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||| ||| | ||||||||| ||| | |||||||    
T  30529145 ttatctttgtgaattagtagaaaagtatggtcaaattatctcaagtcaataatgtatattgtcaa 30529081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 38737461 - 38737378
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    |||||||||||||||  ||||||| |||||||||||||||| |   |||||||||| |||||| |||| ||  ||||||||||||    
T  38737461 attagtagaaaaatacaatcaaagaatgttaagtcaatattatacattgtcaaatagatcatctattgtgg-gacggagggagta 38737378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2139002 - 2139044
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgtta 43  Q
    ||||||||||  |||||||||||||||||||||||||| ||||    
T  2139002 ttatctttgtatattagtagaaaaatatgatcaaagtaagtta 2139044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26543963 - 26543909
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgt 55  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| |||||    
T  26543963 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgt 26543909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 27990798 - 27990760
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  27990798 attagtagaaaaatatggtcaaagtatgttaggtcaata 27990760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39354359 - 39354309
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||| ||| | |||||||||    
T  39354359 ttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaata 39354309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 52379155 - 52379205
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||| ||||||||||||||| |||| ||||||||| | |||||||||    
T  52379155 ttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaata 52379205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10100486 - 10100539
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  10100486 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 10100539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10124204 - 10124151
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  10124204 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 10124151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36035781 - 36035744
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagta 38  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  36035781 ttatctttgtatattagtagaaaaatatgatcaaagta 36035744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 49903658 - 49903695
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagta 38  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  49903658 ttatctttgtatattagtagaaaaatatgatcaaagta 49903695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32988444 - 32988380
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| | || ||||| ||||| ||||||||| ||| | |||||||    
T  32988444 ttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaa 32988380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 48376315 - 48376378
Alignment:
Q  2 tatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    ||||||||||||||||   ||||| ||| ||||||||| ||||||||||| ||| | ||||||||||    
T  48376315 tatctttgtgaattag---aaaaacatgttcaaagtatcttaagtcaataatgtatattgtcaaata 48376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 49805347 - 49805299
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    |||||||||||||||||||  ||||| || ||||||||||| |||||||    
T  49805347 ttatctttgtgaattagtattaaaatgtggtcaaagtatgtcaagtcaa 49805299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 51737049 - 51736968
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgag 82  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||| | |||||||||| |||||| ||||||    
T  51737049 ttatctttgtgaattagtagaaaaatatggtcaaaatatattaagtcaataatgtatattgtcaaatagatcatctattgag 51736968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 50033186 - 50033266
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattga 81  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||  ||||| |||||    
T  50033186 ttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatatcgtcaaataggtcatctattga 50033266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 23603739 - 23603646
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagtag 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||||| ||| | ||||||| ||  ||||| ||||||| ||||||||||||||    
T  23603739 tctttttgaattagtagaaaaatatgttcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattgagg-aacggagggagtag 23603646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19525809 - 19525760
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaat 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19525809 ttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaat 19525760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6923035 - 6922940
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | || |||| ||  ||||  ||||||| |||||||||||||    
T  6923035 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattatcaactaggtcatttattgagg-aacggagggagta 6922940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18360068 - 18360004
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| | |||||||    
T  18360068 ttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaa 18360004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25644525 - 25644589
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  25644525 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 25644589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36602860 - 36602924
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| | |||||||    
T  36602860 ttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaa 36602924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 50035702 - 50035782
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattga 81  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| | ||| | ||||||||||  ||||| |||||    
T  50035702 ttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatctattga 50035782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39194078 - 39194145
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    ||||||||||| |||||||||||||||   ||||||||||||||||||||||||| | ||||||||||    
T  39194078 ttatctttgtgtattagtagaaaaatacagtcaaagtatgttaagtcaatattgtatattgtcaaata 39194145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4209525 - 4209589
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||| ||| | |||||||    
T  4209525 ttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaaatcaataatgtatattgtcaa 4209589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6494756 - 6494820
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||| ||| | |||||||    
T  6494756 ttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaa 6494820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 39260227 - 39260163
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||||| ||| | |||||||    
T  39260227 ttatctttgtgaattagtagaaaagtaggatcaaagtatgtcaagtcaataatgtatattgtcaa 39260163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 55190661 - 55190597
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  55190661 ttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 55190597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19170634 - 19170584
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| |||||||| || |||||||||    
T  19170634 ttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaata 19170584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28152157 - 28152207
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  28152157 ttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaata 28152207  T

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Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28166440 - 28166490
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  28166440 ttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaata 28166490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46803798 - 46803848
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  46803798 ttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaata 46803848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47278372 - 47278322
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  47278372 ttatctttgtgaattgctagaaaaatatgatcaaagtatattaagtcaata 47278322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4264300 - 4264373
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcat 74  Q
    ||||||||||||||||||| |||| |||| ||||||||||| ||||||||| ||| | ||||||| ||| ||||    
T  4264300 ttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaagtcat 4264373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3443482 - 3443418
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  3443482 ttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 3443418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5123252 - 5123188
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  5123252 ttatctttgtgaattagtaaaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 5123188  T

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Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7738914 - 7738850
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  7738914 ttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 7738850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 19652348 - 19652277
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatc 75  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||||||| ||| | ||||||| || ||||||    
T  19652348 tctttttgaattagtagaaaaatatagtcaaagtatgtcaagtcaataatgtatattgtcaactagatcatc 19652277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 53568517 - 53568560
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaa 44  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||    
T  53568517 ttatctttgtgaattagtagaaaaatatggtcaaaatatgttaa 53568560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3442439 - 3442389
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  3442439 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 3442389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3901234 - 3901184
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  3901234 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 3901184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20678683 - 20678633
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  20678683 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 20678633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26205799 - 26205749
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  26205799 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 26205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3708348 - 3708295
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  |||||||||||||||||||||||||| |||| ||||| ||||    
T  3708348 ttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattg 3708295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19631474 - 19631542
Alignment:
Q  1 ttatctttgtgaattagtagaaaaa-tatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||||| ||| ||| | || |||||||    
T  19631474 ttatctttgtgaattagcagaaaaaatatggtcaaagtatgttaagtctataatgtatattatcaaata 19631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45198435 - 45198371
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||  |||| ||||||||| ||||||||||| ||| | |||||||    
T  45198435 ttatctttgtgaattagtataaatttatgttcaaagtatattaagtcaataatgtatattgtcaa 45198371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 46212445 - 46212381
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||| |||||||||| |||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  46212445 ttatctttatgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 46212381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 19633941 - 19633894
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||| |||||||||||||||||||| |||||||| || |||||||||    
T  19633941 tctttttgaattagtagaaaaatatggtcaaagtaggtcaagtcaata 19633894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5735437 - 5735487
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||| ||||||||||||||| |||| ||||||||| | |||||||||    
T  5735437 ttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaata 5735487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10181153 - 10181203
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||  |||||||||||||| || ||||| |||||||||||||||    
T  10181153 ttatctttgtatattagtagaaaaatgtggtcaaaatatgttaagtcaata 10181203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18881325 - 18881375
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||  ||||||||||||||||  ||||||||| |||||||||||    
T  18881325 ttatctttgtatattagtagaaaaatatagtcaaagtatattaagtcaata 18881375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19731261 - 19731211
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||| |||||||| | ||| ||||| |||||||||||||||||||||    
T  19731261 ttatctttctgaattagcataaatatatggtcaaagtatgttaagtcaata 19731211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23256101 - 23256175
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatc 75  Q
    |||| ||||||||||||||||||| |||| || |||||||| || |||||| ||| | ||||||| || ||||||    
T  23256101 ttatttttgtgaattagtagaaaagtatggtccaagtatgtcaaatcaataatgtatattgtcaactagatcatc 23256175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37688128 - 37688090
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtat 39  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  37688128 ttatctttgtgaattagtagaaaagtatggtcaaagtat 37688090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47579452 - 47579502
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||| |||| |||| ||||||||| | |||||||||    
T  47579452 ttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaata 47579502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49768611 - 49768661
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||| |||| |||| ||||||||| | |||||||||    
T  49768611 ttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaata 49768661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 55997277 - 55997327
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||| |||||||||||||||||||||||| |||||  || |||||||||||    
T  55997277 ttatttttgtgaattagtagaaaaatatggtcaaaaaatattaagtcaata 55997327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 8525396 - 8525437
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  8525396 attagtagaaaaatatgatcaaagtaagttaggtcaaaattg 8525437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 21859013 - 21858964
Alignment:
Q  2 tatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||| ||||||||||||||||| |||| ||||||||| | |||||||||    
T  21859013 tatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 21858964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 21914876 - 21914827
Alignment:
Q  2 tatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||| ||||||||||||||||| |||| ||||||||| | |||||||||    
T  21914876 tatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 21914827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31152756 - 31152703
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  31152756 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 31152703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43447260 - 43447207
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  43447260 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 43447207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 48336648 - 48336697
Alignment:
Q  2 tatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||  ||||||||||||||| | ||||| |||||||||||||||    
T  48336648 tatctttgtatattagtagaaaaatacggtcaaaatatgttaagtcaata 48336697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 53987748 - 53987801
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| || |||||||    
T  53987748 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggttaatattg 53987801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1377198 - 1377261
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||| |||||||||||||| |||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  1377198 ttatatttgtgaattagtataaaagtatg-tcaaagtatgtcaagtcaataatgtatattgtcaa 1377261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5744178 - 5744130
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||||||||||| |||| | || ||||||||||| |||||||    
T  5744178 ttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaa 5744130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47834112 - 47834160
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||||    
T  47834112 ttatctttgtatattagtagaaaaatatggtcaaagtaagttatgtcaa 47834160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48380568 - 48380520
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||||    
T  48380568 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 48380520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2864120 - 2864202
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgagg 83  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| ||| | || |||||||  ||||| |||||||    
T  2864120 ttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaataatgtatattatcaaatatgtcatctattgagg 2864202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25563666 - 25563716
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25563666 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaaatcaata 25563716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 37843667 - 37843575
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaaacggagggagta 97  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| ||| | ||||||| ||  ||||| |||||||  ||||||||||||    
T  37843667 tctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaagtaggtcatctattgagg-gacggagggagta 37843575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4299928 - 4299864
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  4299928 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 4299864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16048251 - 16048315
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  16048251 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 16048315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22613804 - 22613740
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  22613804 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 22613740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39405930 - 39405994
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| | |||||||    
T  39405930 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaa 39405994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19087711 - 19087644
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||| | ||||||||||    
T  19087711 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaaata 19087644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41411252 - 41411185
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||| | | | ||||||||||    
T  41411252 ttatctttgtgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaata 41411185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19868781 - 19868731
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  19868781 ttatctttgtgaattagtagaaaaatatcttcaaagtatgttaagtcaata 19868731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43517155 - 43517105
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  43517155 ttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaata 43517105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 14475322 - 14475261
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| ||| | |||||||    
T  14475322 tctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 14475261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 970304 - 970368
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||| | |||||||    
T  970304 ttatctttgtgaattagtagaaaaatatggtcaaagtatattaagttaataatgtatattgtcaa 970368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35290452 - 35290516
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||| | |||||||    
T  35290452 ttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaa 35290516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37516311 - 37516375
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||||||||| ||| | |||||||    
T  37516311 ttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgtatattgtcaa 37516375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39036576 - 39036640
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||| | |||||||    
T  39036576 ttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaa 39036640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39894947 - 39895011
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  39894947 ttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 39895011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1830821 - 1830888
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    |||||||| |||||||||||||||||||| |||||||| |||||||||||| | | | ||||||||||    
T  1830821 ttatctttatgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaata 1830888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30779841 - 30779760
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgag 82  Q
    |||||||||| ||||||||||||||||| |||||||| | |||| |||||| ||| | ||||||| ||| ||||| ||||||    
T  30779841 ttatctttgtaaattagtagaaaaatataatcaaagtgtattaaatcaataatgtatattgtcaactaagtcatctattgag 30779760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5213017 - 5212953
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  5213017 ttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 5212953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5364590 - 5364654
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||| ||||| ||||||||| ||| | |||||||    
T  5364590 ttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaa 5364654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32002109 - 32002045
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    ||||||||||||||||||| |||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  32002109 ttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 32002045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43067387 - 43067451
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| |||||||||||||||||| ||||||||| |||| |||||| ||| | |||||||    
T  43067387 ttatctttgtaaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaa 43067451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40316288 - 40316355
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaata 68  Q
    |||||||| |||||||||||||||||||| ||||| || |||||||||||| | | | ||||||||||    
T  40316288 ttatctttatgaattagtagaaaaatatggtcaaattacgttaagtcaataatatatattgtcaaata 40316355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4924933 - 4924883
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||| |||| |||| ||||||||||| |||||||||    
T  4924933 ttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaata 4924883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23988743 - 23988793
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  23988743 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 23988793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42148473 - 42148523
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  42148473 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 42148523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33402560 - 33402608
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  |||||||||||||||||||||||||| |||| |||||    
T  33402560 ttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaa 33402608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 40512775 - 40512711
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||  ||||||||||| || |||||| ||| | |||||||    
T  40512775 ttatctttgtgaattagtagaaaagtatagtcaaagtatgtcaaatcaataatgtatattgtcaa 40512711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15268559 - 15268602
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaa 44  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||    
T  15268559 ttatctatgtgaataagtagaaaaatatggtcaaagtatgttaa 15268602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 15268602 - 15268644
Alignment:
Q  33 aaagtatgttaagtcaatattgttttttgtcaaataaatcatc 75  Q
    |||||||||||||| ||||||||||||||||||| | ||||||    
T  15268602 aaagtatgttaagtgaatattgttttttgtcaaaaagatcatc 15268644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 25773387 - 25773425
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  25773387 attagtagaaaaatatggtcaaagtatgttaggtcaata 25773425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35448092 - 35448042
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||| |||| |||| ||||||||| | |||||||||    
T  35448092 ttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaata 35448042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1098270 - 1098217
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  1098270 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 1098217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13548308 - 13548255
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  13548308 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 13548255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14057803 - 14057750
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  |||| ||||||||||||||||||||| |||| ||||| ||||    
T  14057803 ttatctttgtatattaatagaaaaatatgatcaaagtaagttaggtcaaaattg 14057750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20022955 - 20022902
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  20022955 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 20022902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20040384 - 20040437
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  20040384 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 20040437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29627434 - 29627483
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaat 50  Q
    ||||||||||||||||||| |||| |||  ||||||||||| ||||||||    
T  29627434 ttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 29627483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41263098 - 41263151
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  41263098 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 41263151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 21961405 - 21961445
Alignment:
Q  13 attagtagaaaaatatgatcaaagtatgttaagtcaatatt 53  Q
    ||||||||| ||||||| ||||||||||| |||||||||||    
T  21961405 attagtagataaatatggtcaaagtatgtcaagtcaatatt 21961445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30788300 - 30788252
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 49  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||||    
T  30788300 ttatctttgtatattagtagaaaaatatggtcaaagtaagttatgtcaa 30788252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12918 - 12982
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  12918 ttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 12982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10559 - 10623
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  10559 ttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 10623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14225 - 14289
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||||||| ||| | |||||||    
T  14225 ttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 14289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 117487 - 117537
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  117487 ttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaata 117537  T

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Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 38323 - 38243
Alignment:
Q  5 ctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaaataaatcatccattgaggaa 85  Q
    |||||||| |||||||||||||||| ||||||||| |||| |||| | ||| | ||||||||||  ||||| |||||||||    
T  38323 ctttgtgacttagtagaaaaatatggtcaaagtattttaaatcaaaaatgtatattgtcaaataggtcatctattgaggaa 38243  T

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Target: scaffold0092 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44203 - 44153
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||||||    
T  44203 ttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaata 44153  T

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Target: scaffold0604 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1280 - 1317
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagta 38  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  1280 ttatctttgtgaattagtagaaaaatatggtcaaagta 1317  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41312 - 41262
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    ||||||||||||||||||| |||| |||| | ||||||||| |||||||||    
T  41312 ttatctttgtgaattagtataaaagtatggttaaagtatgtcaagtcaata 41262  T

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Target: scaffold0340 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 14507 - 14568
Alignment:
Q  4 tctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||||||||||||||||||  ||||||||| | || |||||| ||| | |||||||    
T  14507 tctttgtgaattagtagaaaaatatagtcaaagtatatcaaatcaataatgtatattgtcaa 14568  T

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Target: scaffold0221 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5471 - 5418
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  5471 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 5418  T

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Target: scaffold0204 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 24170 - 24219
Alignment:
Q  2 tatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaata 51  Q
    |||||||||  ||||||||||||||| | ||||| |||||||||||||||    
T  24170 tatctttgtatattagtagaaaaatacggtcaaaatatgttaagtcaata 24219  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 184061 - 184008
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattg 54  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||| ||||    
T  184061 ttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattg 184008  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15311 - 15247
Alignment:
Q  1 ttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaatattgttttttgtcaa 65  Q
    |||||||||| ||||||||||  | |||| ||||||||||| ||||||||| ||| | |||||||    
T  15311 ttatctttgtaaattagtagactagtatggtcaaagtatgtcaagtcaataatgtatattgtcaa 15247  T

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