View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4645_low_22 (Length: 252)

Name: NF4645_low_22
Description: NF4645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4645_low_22
NF4645_low_22
[»] chr2 (34 HSPs)
chr2 (12-252)||(13830770-13831009)
chr2 (12-157)||(30846980-30847125)
chr2 (12-160)||(37106726-37106874)
chr2 (31-156)||(18106029-18106155)
chr2 (19-153)||(24414046-24414180)
chr2 (20-159)||(9632428-9632567)
chr2 (23-157)||(12341645-12341779)
chr2 (12-159)||(13705263-13705416)
chr2 (12-162)||(36128011-36128161)
chr2 (29-160)||(10920689-10920820)
chr2 (13-147)||(37472679-37472813)
chr2 (12-157)||(37999517-37999656)
chr2 (20-157)||(10208341-10208477)
chr2 (81-162)||(6027806-6027887)
chr2 (12-129)||(7314586-7314703)
chr2 (36-153)||(44746023-44746140)
chr2 (30-152)||(45115610-45115734)
chr2 (30-157)||(31942095-31942223)
chr2 (20-157)||(12193736-12193874)
chr2 (19-157)||(8915848-8915985)
chr2 (92-157)||(42797911-42797976)
chr2 (30-154)||(45256875-45256999)
chr2 (88-158)||(25213951-25214021)
chr2 (29-126)||(22900845-22900942)
chr2 (114-154)||(29977466-29977506)
chr2 (19-160)||(15546785-15546926)
chr2 (34-157)||(19104747-19104870)
chr2 (28-67)||(35965384-35965423)
chr2 (53-159)||(26755815-26755921)
chr2 (12-60)||(14540815-14540863)
chr2 (184-244)||(18797355-18797415)
chr2 (82-126)||(29656696-29656740)
chr2 (20-116)||(35248336-35248432)
chr2 (99-159)||(43371655-43371715)
[»] chr7 (55 HSPs)
chr7 (12-157)||(16866207-16866352)
chr7 (12-160)||(30650669-30650817)
chr7 (12-156)||(10072504-10072648)
chr7 (12-157)||(35074508-35074653)
chr7 (12-157)||(45885675-45885820)
chr7 (12-157)||(21702697-21702842)
chr7 (12-160)||(17885503-17885651)
chr7 (12-154)||(18125141-18125283)
chr7 (12-157)||(38139702-38139847)
chr7 (18-157)||(27850242-27850375)
chr7 (12-160)||(39317033-39317181)
chr7 (29-156)||(7780063-7780190)
chr7 (18-157)||(25905672-25905811)
chr7 (12-162)||(24753202-24753351)
chr7 (20-153)||(12980423-12980556)
chr7 (12-157)||(37182312-37182457)
chr7 (12-129)||(39455953-39456070)
chr7 (31-148)||(44658386-44658503)
chr7 (30-157)||(41741360-41741487)
chr7 (20-157)||(44734269-44734404)
chr7 (12-157)||(43507483-43507628)
chr7 (40-157)||(44785168-44785285)
chr7 (18-157)||(17851898-17852035)
chr7 (12-129)||(45380145-45380261)
chr7 (12-157)||(18825776-18825927)
chr7 (32-155)||(37195921-37196044)
chr7 (26-129)||(38152939-38153041)
chr7 (71-161)||(26004392-26004482)
chr7 (35-145)||(37579322-37579432)
chr7 (81-157)||(43550339-43550415)
chr7 (18-157)||(37218049-37218188)
chr7 (19-129)||(3226884-3226994)
chr7 (12-157)||(2630484-2630628)
chr7 (12-148)||(41103694-41103824)
chr7 (71-157)||(3920623-3920706)
chr7 (12-148)||(16079051-16079187)
chr7 (81-157)||(24425475-24425551)
chr7 (12-162)||(45708776-45708920)
chr7 (71-157)||(23457156-23457242)
chr7 (71-157)||(23533526-23533612)
chr7 (32-157)||(27063196-27063321)
chr7 (29-158)||(30839042-30839172)
chr7 (29-126)||(3157138-3157234)
chr7 (32-157)||(44985828-44985952)
chr7 (71-147)||(23475195-23475271)
chr7 (81-161)||(26623046-26623126)
chr7 (88-157)||(19439932-19440001)
chr7 (32-115)||(4101600-4101683)
chr7 (18-157)||(27063378-27063517)
chr7 (158-232)||(1486537-1486611)
chr7 (20-154)||(5377131-5377265)
chr7 (19-61)||(33841123-33841165)
chr7 (32-159)||(42907947-42908076)
chr7 (113-162)||(38082184-38082233)
chr7 (30-126)||(8906530-8906626)
[»] chr3 (50 HSPs)
chr3 (12-157)||(49580097-49580242)
chr3 (12-158)||(7469687-7469833)
chr3 (19-157)||(39655183-39655321)
chr3 (12-157)||(29284369-29284514)
chr3 (12-157)||(44639307-44639452)
chr3 (12-157)||(44953345-44953490)
chr3 (12-157)||(52572642-52572787)
chr3 (12-157)||(4557215-4557360)
chr3 (26-153)||(48305555-48305682)
chr3 (29-160)||(44252797-44252928)
chr3 (12-154)||(34025987-34026129)
chr3 (18-157)||(48390727-48390866)
chr3 (12-154)||(22535754-22535896)
chr3 (12-157)||(4015954-4016099)
chr3 (32-157)||(6738315-6738440)
chr3 (29-158)||(10371182-10371317)
chr3 (12-156)||(54317177-54317321)
chr3 (12-154)||(23153978-23154119)
chr3 (12-158)||(39728704-39728850)
chr3 (13-157)||(43582611-43582755)
chr3 (61-156)||(831084-831179)
chr3 (12-157)||(23546858-23546997)
chr3 (19-157)||(42758414-42758552)
chr3 (32-159)||(19111787-19111914)
chr3 (12-153)||(23580860-23581001)
chr3 (29-157)||(44106704-44106830)
chr3 (32-157)||(20087050-20087175)
chr3 (71-160)||(29858482-29858571)
chr3 (18-154)||(10043195-10043331)
chr3 (30-157)||(10823612-10823733)
chr3 (12-128)||(52198188-52198304)
chr3 (19-107)||(34154454-34154542)
chr3 (30-131)||(34119707-34119808)
chr3 (19-157)||(17146064-17146198)
chr3 (12-88)||(44172659-44172735)
chr3 (12-88)||(44179359-44179435)
chr3 (30-117)||(42243438-42243525)
chr3 (32-117)||(40890393-40890478)
chr3 (12-157)||(53631937-53632082)
chr3 (19-148)||(49025720-49025837)
chr3 (16-123)||(3385800-3385907)
chr3 (87-157)||(12369102-12369172)
chr3 (32-77)||(2490358-2490403)
chr3 (48-157)||(30682889-30682998)
chr3 (18-126)||(3414478-3414586)
chr3 (30-149)||(23910170-23910289)
chr3 (16-69)||(30616279-30616332)
chr3 (124-161)||(52200360-52200397)
chr3 (64-148)||(31126750-31126834)
chr3 (92-144)||(55438705-55438757)
[»] chr6 (38 HSPs)
chr6 (12-157)||(2367359-2367504)
chr6 (29-156)||(10187991-10188118)
chr6 (12-157)||(30986286-30986431)
chr6 (12-148)||(5863302-5863438)
chr6 (12-157)||(27534717-27534862)
chr6 (12-153)||(32853877-32854018)
chr6 (12-159)||(3483831-3483978)
chr6 (29-157)||(31496484-31496612)
chr6 (29-157)||(31501870-31501998)
chr6 (12-161)||(10142424-10142573)
chr6 (12-157)||(12141418-12141563)
chr6 (19-164)||(12309612-12309763)
chr6 (12-157)||(24225731-24225882)
chr6 (12-120)||(9442463-9442570)
chr6 (19-129)||(27738812-27738922)
chr6 (30-129)||(15498375-15498474)
chr6 (71-157)||(14506166-14506252)
chr6 (20-157)||(32532581-32532718)
chr6 (12-130)||(11762478-11762596)
chr6 (18-159)||(28079604-28079745)
chr6 (63-157)||(34178245-34178339)
chr6 (80-157)||(14034591-14034668)
chr6 (50-119)||(30816329-30816398)
chr6 (12-115)||(32053121-32053218)
chr6 (72-159)||(14410776-14410862)
chr6 (71-158)||(24602777-24602864)
chr6 (99-157)||(20349184-20349242)
chr6 (88-157)||(9402685-9402754)
chr6 (20-157)||(12678004-12678141)
chr6 (47-160)||(29341324-29341437)
chr6 (29-157)||(14255008-14255135)
chr6 (158-225)||(27447865-27447932)
chr6 (18-116)||(13769111-13769209)
chr6 (190-252)||(21018413-21018475)
chr6 (81-130)||(7393836-7393885)
chr6 (12-61)||(14410861-14410910)
chr6 (91-152)||(34345926-34345987)
chr6 (81-157)||(32959950-32960026)
[»] chr5 (41 HSPs)
chr5 (12-157)||(4583152-4583297)
chr5 (12-157)||(4920859-4921004)
chr5 (12-159)||(33727910-33728057)
chr5 (12-158)||(5908598-5908744)
chr5 (29-158)||(10127124-10127253)
chr5 (29-158)||(29245861-29245990)
chr5 (12-157)||(15890239-15890384)
chr5 (13-157)||(13401915-13402059)
chr5 (19-148)||(12866471-12866600)
chr5 (12-157)||(40517839-40517984)
chr5 (12-154)||(20973410-20973552)
chr5 (32-152)||(6092445-6092565)
chr5 (29-153)||(22694817-22694940)
chr5 (18-157)||(17853204-17853342)
chr5 (19-131)||(12834511-12834623)
chr5 (19-157)||(18207058-18207196)
chr5 (29-159)||(42987389-42987518)
chr5 (36-157)||(16311204-16311325)
chr5 (12-157)||(30996629-30996773)
chr5 (92-157)||(35311926-35311991)
chr5 (29-157)||(6369745-6369873)
chr5 (55-147)||(42717551-42717643)
chr5 (71-157)||(12447461-12447546)
chr5 (31-157)||(6155831-6155957)
chr5 (29-159)||(39422396-39422526)
chr5 (60-153)||(1218806-1218899)
chr5 (36-153)||(3564655-3564770)
chr5 (88-157)||(18451834-18451903)
chr5 (33-145)||(40187580-40187692)
chr5 (92-154)||(6810259-6810321)
chr5 (32-126)||(23044933-23045027)
chr5 (92-157)||(35193912-35193977)
chr5 (71-158)||(38006391-38006478)
chr5 (29-107)||(2412687-2412765)
chr5 (40-157)||(2681277-2681394)
chr5 (29-157)||(27088284-27088410)
chr5 (18-159)||(28568930-28569071)
chr5 (26-76)||(24207731-24207781)
chr5 (99-164)||(12251071-12251136)
chr5 (20-77)||(27900392-27900449)
chr5 (92-157)||(35584228-35584293)
[»] chr8 (37 HSPs)
chr8 (12-160)||(32303094-32303242)
chr8 (12-157)||(27932446-27932592)
chr8 (12-157)||(24927982-24928127)
chr8 (29-157)||(2075744-2075872)
chr8 (12-131)||(4230666-4230785)
chr8 (12-157)||(20399625-20399770)
chr8 (19-160)||(37960869-37961010)
chr8 (30-157)||(40248281-40248408)
chr8 (12-157)||(1063540-1063691)
chr8 (29-157)||(17220762-17220892)
chr8 (18-137)||(39445506-39445625)
chr8 (12-157)||(35215569-35215713)
chr8 (26-157)||(34777113-34777238)
chr8 (12-129)||(29108760-29108877)
chr8 (13-153)||(5858566-5858706)
chr8 (19-157)||(43113536-43113674)
chr8 (20-158)||(45236106-45236244)
chr8 (12-157)||(24869934-24870079)
chr8 (12-157)||(17469288-17469421)
chr8 (19-157)||(27777108-27777246)
chr8 (35-157)||(34139503-34139630)
chr8 (100-157)||(36131839-36131896)
chr8 (18-158)||(15068497-15068637)
chr8 (47-157)||(1012686-1012796)
chr8 (63-157)||(11254925-11255019)
chr8 (31-117)||(14155584-14155670)
chr8 (29-153)||(14687449-14687573)
chr8 (80-157)||(29416097-29416174)
chr8 (32-154)||(15173793-15173915)
chr8 (81-158)||(14186410-14186487)
chr8 (12-157)||(24568971-24569115)
chr8 (92-157)||(29089888-29089953)
chr8 (32-157)||(28345544-28345671)
chr8 (158-244)||(3819569-3819655)
chr8 (63-153)||(17084027-17084117)
chr8 (32-113)||(6388470-6388551)
chr8 (18-67)||(9642351-9642400)
[»] chr1 (48 HSPs)
chr1 (19-159)||(51421899-51422039)
chr1 (12-159)||(36187128-36187275)
chr1 (12-157)||(24236671-24236816)
chr1 (20-157)||(49250683-49250820)
chr1 (12-157)||(29936450-29936601)
chr1 (12-159)||(24710881-24711028)
chr1 (12-154)||(19572425-19572567)
chr1 (12-157)||(5181073-5181218)
chr1 (20-157)||(23968621-23968758)
chr1 (12-157)||(34673192-34673337)
chr1 (12-157)||(17134981-17135126)
chr1 (12-157)||(23490681-23490826)
chr1 (12-156)||(34611107-34611251)
chr1 (12-157)||(39616326-39616472)
chr1 (12-157)||(45866096-45866240)
chr1 (37-156)||(13390456-13390574)
chr1 (19-157)||(16408983-16409120)
chr1 (12-157)||(18353990-18354135)
chr1 (12-159)||(28297968-28298127)
chr1 (12-157)||(9982800-9982945)
chr1 (29-157)||(40087374-40087501)
chr1 (31-157)||(13020646-13020772)
chr1 (63-157)||(20774651-20774745)
chr1 (19-162)||(29871191-29871333)
chr1 (12-158)||(12495044-12495190)
chr1 (19-153)||(44615389-44615523)
chr1 (19-153)||(44793046-44793180)
chr1 (12-156)||(42439581-42439725)
chr1 (18-157)||(42707747-42707886)
chr1 (13-157)||(3627907-3628039)
chr1 (81-159)||(16433087-16433165)
chr1 (30-120)||(48576059-48576155)
chr1 (29-157)||(19003576-19003704)
chr1 (80-157)||(38106307-38106384)
chr1 (30-117)||(13798290-13798377)
chr1 (12-147)||(35936749-35936884)
chr1 (58-156)||(34059059-34059157)
chr1 (80-126)||(10450018-10450064)
chr1 (80-158)||(49740935-49741013)
chr1 (71-157)||(50426565-50426651)
chr1 (32-132)||(2514811-2514912)
chr1 (18-107)||(10778527-10778616)
chr1 (88-148)||(23719657-23719717)
chr1 (100-157)||(5283515-5283572)
chr1 (18-67)||(16433167-16433216)
chr1 (30-67)||(34060025-34060062)
chr1 (12-76)||(17091950-17092014)
chr1 (184-244)||(35594323-35594383)
[»] chr4 (52 HSPs)
chr4 (29-157)||(31918469-31918597)
chr4 (12-159)||(43893267-43893413)
chr4 (12-157)||(6382183-6382328)
chr4 (12-157)||(11028112-11028257)
chr4 (32-157)||(37349171-37349296)
chr4 (12-157)||(44317574-44317719)
chr4 (12-159)||(31752495-31752642)
chr4 (19-158)||(47550263-47550402)
chr4 (12-158)||(21423900-21424046)
chr4 (12-153)||(7609009-7609150)
chr4 (12-157)||(11122780-11122925)
chr4 (12-157)||(55826534-55826679)
chr4 (12-158)||(15987172-15987318)
chr4 (12-158)||(5902530-5902670)
chr4 (12-157)||(26564870-26565015)
chr4 (12-154)||(32585528-32585664)
chr4 (19-157)||(48459527-48459665)
chr4 (29-157)||(1724181-1724308)
chr4 (12-157)||(39375317-39375466)
chr4 (32-158)||(19548848-19548973)
chr4 (12-157)||(39046991-39047136)
chr4 (35-159)||(42299850-42299974)
chr4 (29-163)||(7985031-7985164)
chr4 (71-157)||(53906249-53906335)
chr4 (35-157)||(19882967-19883089)
chr4 (29-153)||(6481950-6482074)
chr4 (98-154)||(44887669-44887725)
chr4 (32-155)||(15733439-15733562)
chr4 (35-157)||(7334108-7334230)
chr4 (92-158)||(39188621-39188687)
chr4 (65-154)||(425855-425943)
chr4 (81-158)||(3909012-3909089)
chr4 (48-157)||(36919198-36919307)
chr4 (89-159)||(30673077-30673147)
chr4 (12-106)||(37107450-37107543)
chr4 (40-158)||(41914906-41915024)
chr4 (90-155)||(13768365-13768430)
chr4 (33-121)||(39086217-39086305)
chr4 (31-118)||(9929118-9929204)
chr4 (83-154)||(21956728-21956799)
chr4 (91-157)||(19534567-19534633)
chr4 (71-157)||(25298756-25298842)
chr4 (12-58)||(32596194-32596240)
chr4 (99-161)||(33615236-33615298)
chr4 (18-104)||(43309528-43309614)
chr4 (32-157)||(12075543-12075667)
chr4 (92-157)||(23927566-23927630)
chr4 (92-157)||(50375832-50375896)
chr4 (184-244)||(1835035-1835095)
chr4 (29-153)||(4741132-4741255)
chr4 (18-58)||(12825471-12825511)
chr4 (158-242)||(52490547-52490631)
[»] scaffold0795 (1 HSPs)
scaffold0795 (29-157)||(274-401)
[»] scaffold0014 (1 HSPs)
scaffold0014 (20-162)||(14089-14230)
[»] scaffold0036 (1 HSPs)
scaffold0036 (12-159)||(33426-33579)
[»] scaffold0022 (1 HSPs)
scaffold0022 (30-144)||(90648-90756)
[»] scaffold0519 (1 HSPs)
scaffold0519 (63-157)||(10374-10468)
[»] scaffold0027 (1 HSPs)
scaffold0027 (81-158)||(7798-7875)
[»] scaffold0007 (1 HSPs)
scaffold0007 (93-157)||(197259-197323)
[»] scaffold0003 (1 HSPs)
scaffold0003 (158-225)||(39426-39493)


Alignment Details
Target: chr2 (Bit Score: 161; Significance: 6e-86; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 13830770 - 13831009
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||| ||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  13830770 tatacccgttacc-gtcccatacccgtgttttgagatcgaggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtt 13830868  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctacttatgtttttgctgctttgcaattgtggtccttttatccaattttaactaggt 211  Q
    |||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||    
T  13830869 tggttcgggcgggtaaccacgggtatgggttttgttgtcatacctacttatgtttttgcccctttgcaattgtggtccttttatccaattttaactcggt 13830968  T
Q  212 caacgcttgaatggcatgccacatatgtaattacttattta 252  Q
    ||||| ||| ||| |||||||||| |||||||||| |||||    
T  13830969 caacgtttgcatgacatgccacatgtgtaattactgattta 13831009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 30846980 - 30847125
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  30846980 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 30847079  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  30847080 tggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 30847125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 37106726 - 37106874
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||| |||||||||||| |||||||||| ||||||   ||||||| ||||||||||||||||||||||||    
T  37106726 tatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtt 37106825  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctactt 160  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  37106826 tggttcgggcgggtaaccgcgagtatgagttttgttgtcatgcctactt 37106874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 18106155 - 18106029
Alignment:
Q  31 atacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtc-aaattgggtttggttcgggcgggtaacc 129  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||    
T  18106155 atacccgtgttttgagatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccgtcaaaattgagtttgattcgggcgggtaacc 18106056  T
Q  130 acggatatgagttttgttgtcatgcct 156  Q
    ||  |||||||||||||||||||||||    
T  18106055 acatatatgagttttgttgtcatgcct 18106029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 24414180 - 24414046
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||||||||||||||||||||||||||||  ||||||||| |||||||   |||||| |||||||||||||||||||||||||||||||    
T  24414180 gttacccgtcccatacccgtgttttgagatcggggaaaaccgatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcg 24414081  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatg 153  Q
    ||||||||||||| | |||| ||||||||| ||||    
T  24414080 ggcgggtaaccacaggtatgggttttgttgccatg 24414046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 9632428 - 9632567
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || |||||||||||||| ||||||||||||||| ||||||||||  ||||||   |||||| ||| |||||||||||||||| |||||||||||    
T  9632428 ttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatactcaaacccattcaaaacgggaaaaacccgtcaaattgagtttggttcgg 9632527  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    |||||||||||||| |||| ||||||||| ||||||||||    
T  9632528 gcgggtaaccacgggtatgggttttgttgccatgcctact 9632567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 12341645 - 12341779
Alignment:
Q  23 ccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcg 122  Q
    ||||| ||||||| ||||||||| |||||||||||| |||||||||| ||||||   ||||||| |||||||||||||||||||||||||||||||| ||    
T  12341645 ccagtcccatacctgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcggacg 12341744  T
Q  123 ggtaaccacggatatgagttttgttgtcatgccta 157  Q
    | ||||| ||| |||||||||||||| ||||||||    
T  12341745 gataaccgcgggtatgagttttgttgccatgccta 12341779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 13705416 - 13705263
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatcca------aacctggtcaaaatggggaaaacccgtcaaat 105  Q
    ||||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||||| |||      ||||  ||||||| ||||||||||||||||||    
T  13705416 tatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactcatacccatacccatacccaaaccctgtcaaaacggggaaaacccgtcaaat 13705317  T
Q  106 tgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||||| |||||||| |||||||||| || |||||||||||||| ||||||||||    
T  13705316 tgggtatggttcggacgggtaaccatgggtatgagttttgttgccatgcctact 13705263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 36128161 - 36128011
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| |||||||  | |||||||||||||| ||||||||||||| | |||||||||| |||||||  ||||||| |||||||| |||||||||| ||||    
T  36128161 tatacccgttacccatcccatacccgtgtttcgagatcggggaaaccacatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattaggtt 36128062  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctacttat 162  Q
    |||||||| || |||||||||| |||| ||||||||| |||||||| ||||    
T  36128061 tggttcggacgagtaaccacgggtatgggttttgttgccatgcctaattat 36128011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 10920689 - 10920820
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||| ||||||||||||||||  ||||  |||||||||| |||||||  ||||||| ||||||||||  ||||||||| |||||||||||||||||||    
T  10920689 ccatactcgtgttttgagatcggaaaaaatccatacccatacccaaacccagtcaaaacggggaaaacctatcaaattggatttggttcgggcgggtaac 10920788  T
Q  129 cacggatatgagttttgttgtcatgcctactt 160  Q
    ||||| |||| ||||||||| |||||||||||    
T  10920789 cacgggtatgggttttgttgccatgcctactt 10920820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 37472813 - 37472679
Alignment:
Q  13 atactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggttt 112  Q
    |||| ||||||| || ||||||||||||||||| |||||||||||  ||||| |||| |||||||  ||||||| |||||||||||||||||||| ||||    
T  37472813 atacccgttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgagttt 37472714  T
Q  113 ggttcgggcgggtaaccacggatatgagttttgtt 147  Q
    ||||||||||||||||  ||| |||| ||||||||    
T  37472713 ggttcgggcgggtaactgcgggtatgggttttgtt 37472679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 37999517 - 37999656
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| ||  ||||||||||||||||||||||||||||| |||||||||| |||      |||||||||||| |||||||||||||||  ||    
T  37999517 tatacccgttacccgtctcatacccgtgttttgagatcggggaaaacccatacccataccca------gtcaaaatgggggaaacccgtcaaattgaatt 37999610  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||  |||||||||||||| ||||||||| ||||||||    
T  37999611 tggttcgggcgactaaccacggatatgggttttgttgccatgccta 37999656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 10208477 - 10208341
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || ||||||||||||||| |||| ||||||||| |||||||||| |||||||  ||||||| |||||||| ||||||||||   ||||||||||    
T  10208477 ttacccgtcccatacccgtgttttaagattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaa-ccgtcaaattaactttggttcgg 10208379  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||| ||| ||||| |||||||||||||| ||||||||    
T  10208378 gcggataatcacgggtatgagttttgttgccatgccta 10208341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 6027887 - 6027806
Alignment:
Q  81 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctacttat 162  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||||||||||||||    
T  6027887 tcaaaacggggaaaacccgtcaaattgggtttggttcgggcggataaccacgagtatgggttttgttgtcatgcctacttat 6027806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 7314703 - 7314586
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||| ||| |||| | |||||||||||| ||||||||||||||||||  ||||||| |||||||| ||||||||||| |||    
T  7314703 tatacccgttacccgtcccatactcgtattttaaaatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccgtcaaattgagtt 7314604  T
Q  112 tggttcgggcgggtaacc 129  Q
    |||||||||||| |||||    
T  7314603 tggttcgggcggttaacc 7314586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 44746140 - 44746023
Alignment:
Q  36 cgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggat 135  Q
    |||||||||| |||||||||||| || | ||||| ||||||    |||||| |||||||||||||||||||||||||||| |||| ||||||||  ||||    
T  44746140 cgtgttttgaaatcggggaaaacccaaatccatacccaaactcaatcaaaacggggaaaacccgtcaaattgggtttggtacgggtgggtaaccgtggat 44746041  T
Q  136 atgagttttgttgtcatg 153  Q
    ||||||||||||| ||||    
T  44746040 atgagttttgttgccatg 44746023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 45115610 - 45115734
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcata--cccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaa 127  Q
    |||||||||||||||| |||| ||||||||||||  |||||| |||||||  ||||||| ||||||||||||||||||||| |||||||||| |  ||||    
T  45115610 catacccgtgttttgaaatcgaggaaaactcatatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcggacaagtaa 45115709  T
Q  128 ccacggatatgagttttgttgtcat 152  Q
    || ||| |||| ||||| |||||||    
T  45115710 ccgcgggtatgggttttattgtcat 45115734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 31942223 - 31942095
Alignment:
Q  30 catacccgtgtttt-gagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||||||| || |||| ||| ||| || |||||||||||||||  ||||||  ||| ||||||| |||||||| |||||||| |||||||||||    
T  31942223 catacccgtgtttttgaaatcgaggataacccaaacccatatccaaacccagtcaaagcgggaaaaacccatcaaattgagtttggtttgggcgggtaac 31942124  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    ||||| |||| ||||||||||||| ||||    
T  31942123 cacgggtatgggttttgttgtcataccta 31942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 12193874 - 12193736
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || ||||||||||||| ||| |||||| ||||| ||||| |||| |||||||  |||||||| || ||||||||||||||||||||||| ||||    
T  12193874 ttacccgtcccatacccgtgttctgaaatcgggaaaaacacatactcatacccaaacccagtcaaaatcggaaaaacccgtcaaattgggtttggctcgg 12193775  T
Q  120 gcgggtaac-cacggatatgagttttgttgtcatgccta 157  Q
    | ||||||| | ||| ||||  |||||||| ||||||||    
T  12193774 gtgggtaacgcgcgggtatggtttttgttgccatgccta 12193736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 8915985 - 8915848
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || |||||||||||||||||||||| | ||||| |||||||||||||||||   ||||||| ||| |||| |||||||||||  |||| || |    
T  8915985 gttacccgtcccatacccgtgttttgagatcgag-aaaacccatacccatatccaaactcagtcaaaacgggaaaaatccgtcaaattgaatttgatttg 8915887  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||| ||||||| | |||| ||||||||| ||| ||||    
T  8915886 ggcggataaccacaggtatgggttttgttgccataccta 8915848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 42797976 - 42797911
Alignment:
Q  92 aaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  42797976 aaaacccgtcaaattagatttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 42797911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 45256875 - 45256999
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacc 129  Q
    |||||||||||||||| |||||||||||||||||| |||||||| |||  ||||||| ||| |||| || | ||||  | |||||||| | ||  |||||    
T  45256875 catacccgtgttttgaaatcggggaaaactcatactcatatccacacccagtcaaaacgggaaaaatccattaaatctgatttggttcagacgactaacc 45256974  T
Q  130 acggatatgagttttgttgtcatgc 154  Q
    || ||||||  ||||||||||||||    
T  45256975 acagatatggattttgttgtcatgc 45256999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 25213951 - 25214021
Alignment:
Q  88 ggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||  ||||||| ||||||||| |||||||||    
T  25213951 ggggaaaacccgtcaaattggatttggttcgggtgggtacccgtggatatgggttttgttgccatgcctac 25214021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 22900845 - 22900942
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggta 126  Q
    ||||||||||||||||| |||||| ||||| || ||||||| ||| |||  |||||| || |||||||||||||||| ||| | |||| |||||||||    
T  22900845 ccatacccgtgttttgaaatcgggaaaaacccaaacccatacccagaccaagtcaaagtgaggaaaacccgtcaaatcgggatgggttagggcgggta 22900942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 29977506 - 29977466
Alignment:
Q  114 gttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  29977506 gttcgggcgggtaaccgcggatatgagttttgttgtcatgc 29977466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 15546785 - 15546926
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||||||||||||||| |||||||||||| || ||||||  ||| | |  ||||||  ||||||||| |||||||| ||| |  ||| |    
T  15546785 gttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatgcccagatccagtcaaagcggggaaaactcgtcaaatgggggtgagtttg 15546884  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgcctactt 160  Q
    |||||||| ||| ||  ||| || |||||| |||| ||||||    
T  15546885 ggcgggtacccatggggatgggtattgttgccatgtctactt 15546926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 19104870 - 19104747
Alignment:
Q  34 cccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgg 133  Q
    ||||||||| || |||||||||||| || || |||| |||||||   |||||| ||  ||||||| |||||||||||||| |||||   |||||||||      
T  19104870 cccgtgtttggaaatcggggaaaacccaaactcatacccaaacccaatcaaaacggaaaaaacccatcaaattgggtttgattcggattggtaaccacat 19104771  T
Q  134 atatgagttttgttgtcatgccta 157  Q
     |||  ||||||||| ||||||||    
T  19104770 gtataggttttgttgccatgccta 19104747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 35965384 - 35965423
Alignment:
Q  28 tccatacccgtgttttgagatcggggaaaactcataccca 67  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  35965384 tccatacccgtgttttgaaatcggggaaaactcaaaccca 35965423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 26755815 - 26755921
Alignment:
Q  53 gaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcat 152  Q
    |||||| || || |||| |||||||  ||||||  ||| |||||||||||||| ||| |||||| |||| |||| ||| ||  | | |||||||||||||    
T  26755815 gaaaacccaaactcatacccaaacccagtcaaatcgggaaaaacccgtcaaatcggggttggtttgggcaggtacccatgggcacgggttttgttgtcat 26755914  T
Q  153 gcctact 159  Q
    |||||||    
T  26755915 gcctact 26755921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 14540815 - 14540863
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactc 60  Q
    ||||| ||||||| ||  |||||||||||||||| ||||||||||||||    
T  14540815 tatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactc 14540863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 18797355 - 18797415
Alignment:
Q  184 tggtccttttatccaattttaactaggtcaacgcttgaatggcatgccacatatgtaatta 244  Q
    ||||||||||| |||||||| ||| |||||||||||   ||||||||||| | ||||||||    
T  18797355 tggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtgtaatta 18797415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 29656740 - 29656696
Alignment:
Q  82 caaaatggggaaaacccgtcaaattgggtttggttcgggcgggta 126  Q
    |||||||||||||||| |||||| || ||||||||| ||||||||    
T  29656740 caaaatggggaaaaccagtcaaaatgagtttggttctggcgggta 29656696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 35248432 - 35248336
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggtt 116  Q
    ||||| || ||||||||||||||||  |||| ||||||| || |||| || ||||||    ||||| || ||||||||| ||||| |||||||||||    
T  35248432 ttacccgtcccatacccgtgttttgtaatcgtggaaaacccaaacccgtacccaaactcaatcaaagtgaggaaaacccatcaaaatgggtttggtt 35248336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 43371655 - 43371715
Alignment:
Q  99 gtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    |||||||| || |||||| |||||| || ||| ||| ||||||||||||| ||||||||||    
T  43371655 gtcaaattagggttggtttgggcggatatccatggacatgagttttgttgccatgcctact 43371715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 16866207 - 16866352
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||  || |||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  16866207 tatacccgttactcgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 16866306  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  16866307 tggttcgggcgggtaaccacggatatgagttttgttgccatgccta 16866352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 30650669 - 30650817
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||| |||||||||||||||||||| | |||||  ||||||| ||||||||||||||||||||||||    
T  30650669 tatacccgttacccgtcccatacccgtgttttgagattggggaaaactcatacccatacctaaacccagtcaaaacggggaaaacccgtcaaattgggtt 30650768  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctactt 160  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  30650769 tggttcgggcgggtaaccacgggtatgagttttgttgacatgcctactt 30650817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 10072504 - 10072648
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  10072504 tatacccgttacccgttccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 10072603  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcct 156  Q
    |||||||||||||||||| ||| |||| ||||||||| |||||||    
T  10072604 tggttcgggcgggtaaccgcgggtatgggttttgttgccatgcct 10072648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 35074508 - 35074653
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||| |||||||||||||| |||||||||| |||||||  ||||||| |||||||||||||| |||||||||    
T  35074508 tatacccgttacccgtcccatacccgtgttttaagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtctaattgggtt 35074607  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  35074608 tggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 35074653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 45885820 - 45885675
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| || |||||||||| ||||||||||    
T  45885820 tatacttgttacccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgttaaattgggtt 45885721  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| |||||||||||||| |||| ||||||||| ||||||||    
T  45885720 tggttcgagcgggtaaccacgggtatgggttttgttgccatgccta 45885675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 21702697 - 21702842
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||||||||| ||||| |||| |||||||  ||||||| ||| |||| |||||||||||||||    
T  21702697 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacgggaaaaatccgtcaaattgggtt 21702796  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  21702797 tggttcgggcgggtaaccacggatatgggttttgttgccatgccta 21702842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 17885503 - 17885651
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||| |||||| | |||||||||||| ||||||||||| ||||||  ||||||| ||||||||||||||||||||||||    
T  17885503 tatacccgttacccgtcccatacccatgttttaaaatcggggaaaacccatacccatattcaaacccagtcaaaacggggaaaacccgtcaaattgggtt 17885602  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctactt 160  Q
    |||||||||| ||||||||||| |||| ||||||||| |||||||||||    
T  17885603 tggttcgggcaggtaaccacgggtatgggttttgttgccatgcctactt 17885651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 18125283 - 18125141
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||| ||||| ||||| ||||  ||||||  ||||||| ||||||||||||||||||||| ||    
T  18125283 tatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatactcatacacaaacccagtcaaaacggggaaaacccgtcaaattggatt 18125184  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  18125183 tggttcgggcgagtaaccacggatatgaattttgttgtcatgc 18125141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 38139847 - 38139702
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||||| ||||| || |||||| |||||||||| || ||||||||| ||||||||||||||||||  ||||||| |||||||| || ||||||||||||    
T  38139847 tatactcattacccgtcccatactcgtgttttgaaattggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccatcaaattgggtt 38139748  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||| |||||||| ||||| ||| ||||||||    
T  38139747 tggttcgggcgggtaaccgcggatatgggttttcttgccatgccta 38139702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 27850375 - 27850242
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || ||||||||||||||||| |||||||||||| |||||||| | ||||      |||||| |||||||| |||||||||||||||||||||    
T  27850375 cgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccaaacccaa------tcaaaacggggaaaaaccgtcaaattgggtttggttc 27850282  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  27850281 gggcgggtaaccacggatatgagttttgttgccatgccta 27850242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 39317033 - 39317181
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| || |||| || ||||||||||||||||| |||| ||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||| |||    
T  39317033 tatacccgctacccgtcccatacccgtgttttgaaatcgaggaaaactcatactcatatccaaacccagtcaaaacggggaaaacccgtcaaattgagtt 39317132  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctactt 160  Q
    |||||||||||| ||||| ||  ||||| |||||||| |||||||||||    
T  39317133 tggttcgggcggataaccgcgagtatgaattttgttgccatgcctactt 39317181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 7780063 - 7780190
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||| |||||||| ||||||||||| |||||||||||  |||||||    
T  7780063 ccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattgagtttggttcggatgggtaac 7780162  T
Q  129 cacggatatgagttttgttgtcatgcct 156  Q
    ||||| |||| ||||||||| |||||||    
T  7780163 cacgggtatgggttttgttgccatgcct 7780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 25905672 - 25905811
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || ||||||| |||||||||||| ||||||||| |||||||||| |||||||  ||||||| |||||||||| |||||||||||||| ||||    
T  25905672 cgttacccgtcccatacctgtgttttgagattggggaaaacccatacccatacccaaacccagtcaaaaaggggaaaacctgtcaaattgggtttagttc 25905771  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    | |||||||||||||| |||| ||||||||| ||||||||    
T  25905772 gagcgggtaaccacgggtatgggttttgttgccatgccta 25905811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 24753202 - 24753351
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||| || ||||| |||||||||||  ||    
T  24753202 tatacccgttacccgtcccatacccgtgttttgagatcggg-aaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattgaatt 24753300  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctacttat 162  Q
    |||||||| ||||||||||||| |||| ||||||||| |||||||| ||||    
T  24753301 tggttcggacgggtaaccacgggtatgggttttgttgccatgcctaattat 24753351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 12980423 - 12980556
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || ||||||||||||||||| ||||||||||||  | ||||||| |||||||  ||||||||||||||||||||| |||||| |||||||||      
T  12980423 ttacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaacccagtcaaaatggggaaaacccgttaaattgagtttggttcta 12980522  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatg 153  Q
    |||||||||||||| |||||||||||||| ||||    
T  12980523 gcgggtaaccacgggtatgagttttgttgccatg 12980556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 37182312 - 37182457
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| || |||| || |||||||||||||||||  |||| |||||| ||||| |||| |||||||  ||||||| |||||||||||||||||||| |||    
T  37182312 tatacccgctacccgtcccatacccgtgttttgaattcggagaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtt 37182411  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    || ||||||||||||||| |||||||| ||||||||| || |||||    
T  37182412 tgattcgggcgggtaaccgcggatatgggttttgttgccacgccta 37182457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 39456070 - 39455953
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||| |||||||| |||||||||||| |||| ||||| |||||||  ||||||| ||||||||| ||||||||||||||    
T  39456070 tatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccatatccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtt 39455971  T
Q  112 tggttcgggcgggtaacc 129  Q
    ||||||||||||||||||    
T  39455970 tggttcgggcgggtaacc 39455953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 44658503 - 44658386
Alignment:
Q  31 atacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacca 130  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||  ||||||| | ||||||||||||||||||| |||||||||||| |||||||     
T  44658503 atacccgtgttttgaaatcgggaaaaactcatacccatacccaaacccagtcaaaacgaggaaaacccgtcaaattggatttggttcgggcaggtaaccg 44658404  T
Q  131 cggatatgagttttgttg 148  Q
    ||| |||| |||||||||    
T  44658403 cgggtatgggttttgttg 44658386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 41741487 - 41741360
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacc 129  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||| |  || |||||||||||||| | ||||||||||||||||||||||||||||||    
T  41741487 catacccgtgttttgaaatcggggaaaacccatactcatacccaaatccagtaaaaatggggaaaactcatcaaattgggtttggttcgggcgggtaacc 41741388  T
Q  130 acggatatgagttttgttgtcatgccta 157  Q
     |  ||||| ||||||||| ||||||||    
T  41741387 gcaaatatgggttttgttgccatgccta 41741360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 44734404 - 44734269
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || ||||||||||||||||| |||| | ||||| ||||| |||  |||||||  |||||||  |||||||||||||||||||||||||||||||    
T  44734404 ttaccggtcccatacccgtgttttgaaatcgagaaaaacacatacacattcccaaacccagtcaaaa--gggaaaacccgtcaaattgggtttggttcgg 44734307  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||| ||  |||||||||||||| ||||||||    
T  44734306 gcgggtaaccgcgagtatgagttttgttgccatgccta 44734269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 43507483 - 43507628
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| ||  ||||||| |||||||| |||||||||||| |||||  ||| |||||||  ||||||| ||||||||||| ||||||||||||    
T  43507483 tatacccgttacccgtctcatacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaacggggaaaacccatcaaattgggtt 43507582  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||| | ||||||||| ||||||||| |||| ||| ||||||||    
T  43507583 tggttcagacgggtaaccgcggatatgaattttattgccatgccta 43507628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 157
Target Start/End: Complemental strand, 44785285 - 44785168
Alignment:
Q  40 ttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatga 139  Q
    |||||||||||| |||||| |||||||||| |||||| | ||||||| ||||||||| |||||||||||||||| |||||||||||||||||   |||||    
T  44785285 ttttgagatcggagaaaacccatacccatacccaaacttagtcaaaacggggaaaactcgtcaaattgggtttgattcgggcgggtaaccacatgtatga 44785186  T
Q  140 gttttgttgtcatgccta 157  Q
     |||||||| ||||||||    
T  44785185 attttgttgccatgccta 44785168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 17851898 - 17852035
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || |||||||||||||   |||||||||||||| |||||||||| |||||||  ||||||| || ||||| || ||||||||||||||||||    
T  17851898 cgttacccgtcccatacccgtgtta--agatcggggaaaacccatacccatacccaaacccagtcaaaacggagaaaatccatcaaattgggtttggttc 17851995  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||   |||| ||||||||| ||||||||    
T  17851996 gggcgggtaaccacaagtatgggttttgttgccatgccta 17852035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 45380145 - 45380261
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||| |||||| |||||| ||||| ||||||||||||||||||  |||||||  ||||||| |||||||||||||||    
T  45380145 tatacccgttacccgtcccatacccgtattttgaaatcgggaaaaacccatacccatatccaaacccagtcaaaacagggaaaa-ccgtcaaattgggtt 45380243  T
Q  112 tggttcgggcgggtaacc 129  Q
    |||||||| |||||||||    
T  45380244 tggttcggacgggtaacc 45380261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 18825927 - 18825776
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatcc------aaacctggtcaaaatggggaaaacccgtcaaat 105  Q
    ||||| ||||||| || ||||||||||||||||| |||||||||||| || ||||| | ||      |||||  ||||||| ||||||||||||||||||    
T  18825927 tatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccacaccctcacccaaacccagtcaaaacggggaaaacccgtcaaat 18825828  T
Q  106 tgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||| ||| |||||| || |||| ||||||||| ||||||||    
T  18825827 tgggtttggttcggacggttaaccatgggtatgggttttgttgccatgccta 18825776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 155
Target Start/End: Complemental strand, 37196044 - 37195921
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    |||| ||||||||| |||||||||||  |||||||||| ||||||||  ||||||  ||||||| ||||||||||| |||||||| |||||| |||||||    
T  37196044 tacctgtgttttgaaatcggggaaaatccatacccatacccaaacctaatcaaaacagggaaaatccgtcaaattgagtttggtttgggcggataaccac 37195945  T
Q  132 ggatatgagttttgttgtcatgcc 155  Q
    || ||||  |||||||||||||||    
T  37195944 gggtatggattttgttgtcatgcc 37195921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 38152939 - 38153041
Alignment:
Q  26 gttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggt 125  Q
    ||||||||||| |||||||| |||||||||||| |||||||||| |||||||  |||||||  ||||||| ||||||||||| |||||||||||||||||    
T  38152939 gttccatacccatgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaa-cgggaaaatccgtcaaattgagtttggttcgggcgggt 38153037  T
Q  126 aacc 129  Q
    ||||    
T  38153038 aacc 38153041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 26004482 - 26004392
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctactta 161  Q
    |||||||  ||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  26004482 ccaaacccagtcaaaacgggaaaaacccatcaaattgtgtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcctactta 26004392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 145
Target Start/End: Original strand, 37579322 - 37579432
Alignment:
Q  35 ccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgga 134  Q
    |||||||| || |||||| ||||  || ||||||| |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||      
T  37579322 ccgtgtttcgaaatcgggaaaaatccaaacccatacccaaacctagtcaaaacggggaaaacccgtctaattgggtttggttcgggcgggtaaccacgcg 37579421  T
Q  135 tatgagttttg 145  Q
    |||| ||||||    
T  37579422 tatgggttttg 37579432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 43550415 - 43550339
Alignment:
Q  81 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||||||||| |||||| ||| | |||||| ||||||||||||||||||||||||||||||    
T  43550415 tcaaaatggggaaaacccgtcaaattaggtttgattcagacgggtatccacggatatgagttttgttgtcatgccta 43550339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 37218049 - 37218188
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || || |||| ||||||||| || ||  |||||||| || |||| |||||||  ||||||| ||||||||||| |||||||| |||||||||    
T  37218049 cgttacccgtcccgtacctgtgttttgaaataggataaaactcaaactcatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttc 37218148  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||| ||||| || | | |||||||||||||||||||||||    
T  37218149 gggtgggtatccgctggtatgagttttgttgtcatgccta 37218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 3226994 - 3226884
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||||||||||||||| |||||||||||| ||||||||||  |||||   || |||| | |||||| ||||||||||||||||||||||    
T  3226994 gttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatactcaaactcagttaaaacgaggaaaatccgtcaaattgggtttggttcg 3226895  T
Q  119 ggcgggtaacc 129  Q
    | |||||||||    
T  3226894 gacgggtaacc 3226884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 2630628 - 2630484
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||| ||| || |||||||| |||||| | |||||||||||| || ||||||| |||||||  || |||||||| ||||| ||||||||||||||    
T  2630628 tatacccgtcacccgtcccatacccatgttttaa-atcggggaaaacccaaacccatacccaaacccagtaaaaatgggtaaaacacgtcaaattgggtt 2630530  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||| |||  |||| ||| || |||  ||||||||||||||||||    
T  2630529 tggtttgggtaggtatccatgggtatcggttttgttgtcatgccta 2630484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 41103694 - 41103824
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||| | || ||||||||||||||||| |||||||||||| |||||||| | |||      ||||||| ||| |||| ||||||||| || ||    
T  41103694 tatacccgttaaccgtcccatacccgtgttttgaaatcggggaaaacccatacccacaccca------gtcaaaacgggaaaaatccgtcaaatcggatt 41103787  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttg 148  Q
    ||||||| |||||||||||| | ||||||||||||||    
T  41103788 tggttcgcgcgggtaaccacaggtatgagttttgttg 41103824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 157
Target Start/End: Original strand, 3920623 - 3920706
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||  ||||||| ||| ||||||| ||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||    
T  3920623 ccaaacccagtcaaaacgggaaaaacccatcaaattgggtttggttcgggtgggta---acggatatgagttttgttgtcatgccta 3920706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 16079051 - 16079187
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||||||||| |||||| || ||  ||| ||||||   |||||||  |  ||||| ||||||||| ||||    
T  16079051 tatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccaaacttatacccaaactcagtcaaaaccgaaaaaactcgtcaaattaggtt 16079150  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttg 148  Q
    || ||||||||||||||||||  |||| |||||||||    
T  16079151 tgcttcgggcgggtaaccacgagtatgggttttgttg 16079187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 24425475 - 24425551
Alignment:
Q  81 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||| || ||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||    
T  24425475 tcaaaacggagaaaatccgtcaaattgggtttggttcgggctggtaaccacgtgtatgagttttgttgccatgccta 24425551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 45708920 - 45708776
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || | ||||||||||||||||||||| |||||| |||||| | | |||      ||||||| | |||||| |  ||||||||| ||    
T  45708920 tatacccgttacccgtccaatacccgtgttttgagatcggagaaaacccataccaaaaccca------gtcaaaacgaggaaaatctatcaaattggatt 45708827  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctacttat 162  Q
    || ||||||||| ||| |||| ||||||||||||||| |||||||| ||||    
T  45708826 tgattcgggcggataatcacgtatatgagttttgttgccatgcctatttat 45708776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 157
Target Start/End: Original strand, 23457156 - 23457242
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||  ||||||  ||||||||||||||||||||||||||||||| | ||||| || ||| |||||||||||||  ||||||||    
T  23457156 ccaaacccagtcaaagcggggaaaacccgtcaaattgggtttggttcgagagggtacccgcgggtatgagttttgtttacatgccta 23457242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 23533612 - 23533526
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||  ||||||  ||| ||||||||||||||||||||||||||||| ||||| || ||| ||||  |||||||||||||||||    
T  23533612 ccaaacccagtcaaatcgggaaaaacccgtcaaattgggtttggttcgggagggtacccgcgggtatggattttgttgtcatgccta 23533526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 27063196 - 27063321
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    ||||||| |||||| |||| |||||||||| || |||| |||||||  ||||||   ||||||| ||||||||| ||| |||||| ||| ||||| |||     
T  27063196 tacccgtattttgaaatcgaggaaaactcaaactcatacccaaacccagtcaaatcagggaaaatccgtcaaatcggggttggtttgggagggtacccat 27063295  T
Q  132 ggatatgagttttgttgtcatgccta 157  Q
    ||  | ||||||||||||||||||||    
T  27063296 gggcacgagttttgttgtcatgccta 27063321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 30839172 - 30839042
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggg-gaaaacccgtcaaattgggtttggttcgggcgggtaa 127  Q
    |||||||||| |||||| ||| ||||||||||| || |||| |||||||  ||||||  ||  ||||||||||||||| ||| |||||| | |||||||     
T  30839172 ccatacccgtattttgaaatcagggaaaactcaaactcatacccaaacccagtcaaatcggaagaaaacccgtcaaatcggggttggtttgagcgggtac 30839073  T
Q  128 ccacggatatgagttttgttgtcatgcctac 158  Q
     || ||| | | |||||||||||||||||||    
T  30839072 tcatggacacgggttttgttgtcatgcctac 30839042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 3157138 - 3157234
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggta 126  Q
    |||||||| | |||||| ||||||||||||  | ||||||| |||||||  ||||||  |||||||| ||| |||||| |||||||||||||||||||    
T  3157138 ccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaagtcaaagcggggaaaa-ccgacaaattaggtttggttcgggcgggta 3157234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 44985952 - 44985828
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    ||||||||||| || ||||| |||||| |||| ||||| |||||||   |||||| || ||||| |||||||||| | ||||||||||  |||||||| |    
T  44985952 tacccgtgttt-gaaatcggagaaaacccatatccatacccaaacccaatcaaaacggagaaaatccgtcaaattagatttggttcggatgggtaaccgc 44985854  T
Q  132 ggatatgagttttgttgtcatgccta 157  Q
    |  ||||||||||||||  |||||||    
T  44985853 gagtatgagttttgttgcaatgccta 44985828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 23475271 - 23475195
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgtt 147  Q
    |||||||  ||||||  |||||||||||||||||||| |||||||||| | ||||| |||||| |||| ||||||||    
T  23475271 ccaaacccagtcaaagcggggaaaacccgtcaaattgagtttggttcgagagggtatccacgggtatgggttttgtt 23475195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 26623046 - 26623126
Alignment:
Q  81 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctactta 161  Q
    |||||| |||||||| ||| |||| ||  |||||||||| | | ||| ||||| |||||||||||||||||||||||||||    
T  26623046 tcaaaacggggaaaatccgacaaaatgaatttggttcggaccgataaacacgggtatgagttttgttgtcatgcctactta 26623126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 19440001 - 19439932
Alignment:
Q  88 ggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||||||||||||||||| | ||||| || ||| ||||  |||||||  ||||||||    
T  19440001 ggggaaaacccgtcaaattgggtttggttcgagagggtacccgcgggtatggtttttgtttacatgccta 19439932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 4101600 - 4101683
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggt 115  Q
    |||| ||||||||| |||  ||||||| || |||| ||||||||||| ||||||  ||| ||||||| |||||||| |||||||    
T  4101600 tacctgtgttttgaaatcatggaaaacccaaacccttatccaaacctagtcaaagcgggaaaaacccatcaaattgagtttggt 4101683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 27063378 - 27063517
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || || ||||||| || | | ||||||||||||  | ||||||| |||||||  |||||| |||| |||| ||||||||| ||| ||||||     
T  27063378 cgttacccgtcccgtacccgtattattaaatcggggaaaaccgagacccatacccaaacccagtcaaattgggaaaaatccgtcaaatcggggttggttt 27063477  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||| || ||| ||  | | ||||||||| ||||||||    
T  27063478 gggcggttatccatgggcacgggttttgttgccatgccta 27063517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 1486611 - 1486537
Alignment:
Q  158 cttatgtttttgctgctttgcaattgtggtccttttatccaattttaactaggtcaacgcttgaatggcatgcca 232  Q
    |||||||||||||  ||||||||| ||  || |||||  ||||||||||| |||||||||||| ||| |||||||    
T  1486611 cttatgtttttgcccctttgcaatagtcatcattttactcaattttaactcggtcaacgcttgcatgtcatgcca 1486537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 5377131 - 5377265
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || ||||||| ||||||||| |||||||||||| || || ||||  ||| ||   |||||| ||| |||| |||| ||||| | |||||||| |    
T  5377131 ttacccgtcccatacctgtgttttgaaatcggggaaaacccaaactcatactcaaccccaatcaaaacgggaaaaatccgttaaattagatttggttcag 5377230  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatgc 154  Q
       ||||||||||| ||||| |||| |||||||||    
T  5377231 ataggtaaccacgggtatgaattttattgtcatgc 5377265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 33841123 - 33841165
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactca 61  Q
    |||||| || ||||||||||||||||| |||||||||||||||    
T  33841123 gttacccgtcccatacccgtgttttgaaatcggggaaaactca 33841165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 42908076 - 42907947
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggc--gggtaacc 129  Q
    ||||||| |||||| |||||||||||| || || |||| |||||||   ||||| |||| |||| ||||||||| | | |||||| ||||  ||||| ||    
T  42908076 tacccgtattttgaaatcggggaaaacccaaactcatacccaaacccaatcaaattgggaaaaaaccgtcaaatcgaggttggtttgggcgggggtaccc 42907977  T
Q  130 acggatatgagttttgttgtcatgcctact 159  Q
    | ||| ||| ||||| ||| ||||||||||    
T  42907976 atggacatgggttttattgccatgcctact 42907947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 38082233 - 38082184
Alignment:
Q  113 ggttcgggcgggtaaccacggatatgagttttgttgtcatgcctacttat 162  Q
    ||||| |||||||| |||||| |||| |||||||||||||||||| ||||    
T  38082233 ggttcaggcgggtacccacgggtatgcgttttgttgtcatgcctaattat 38082184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 8906626 - 8906530
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggta 126  Q
    ||||| |||||||||| ||||| ||||||||| ||||||| ||||| |   |||||  || ||||||||||||||| ||  | |||| |||||||||    
T  8906626 catactcgtgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaagcggagaaaacccgtcaaatcggagtgggtttgggcgggta 8906530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 9e-51; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 49580097 - 49580242
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||| ||    
T  49580097 tatactcgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatt 49580196  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||| ||||||||| |||| ||||||||||||||||||    
T  49580197 tggttcgggcggataaccacgggtatgggttttgttgtcatgccta 49580242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 7469833 - 7469687
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| |||||| |||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  7469833 tatacccgttacccgtcccatacccgtgtttcgagatcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 7469734  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||||    
T  7469733 tggttcgggcgggtaaccacgggtatgggttttgttgccatgcctac 7469687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 39655321 - 39655183
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||   |||||| |||||||||||||||||||||||||||||||    
T  39655321 gttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcg 39655222  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||| |||| ||||||||| ||||||||    
T  39655221 ggcgggtaaccacgggtatgggttttgttgccatgccta 39655183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 29284369 - 29284514
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||| ||||| |||||||||| |||||||  ||||||| || |||||||||||||||||||||    
T  29284369 tatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgggtt 29284468  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||    
T  29284469 tggttcgggcgggtaaccacgggtatgagttttgttgccatgccta 29284514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 44639307 - 44639452
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||||||  |||||||| |||||||||| |||||||  |||||||||||||||||| |||||||||||||    
T  44639307 tatacccgttacccgtcccatacccgtgttttgagatatgggaaaacccatacccatacccaaacccagtcaaaatggggaaaaccagtcaaattgggtt 44639406  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    | |||||| |||||||||||||||||||||||||||| ||||||||    
T  44639407 tcgttcggacgggtaaccacggatatgagttttgttgccatgccta 44639452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 44953490 - 44953345
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| | |||||||  ||||||| ||||||||||||||||||||||||    
T  44953490 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 44953391  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| |||||||||||||| ||||| |||||||| ||||||||    
T  44953390 tggttcgagcgggtaaccacgggtatgaattttgttgccatgccta 44953345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 52572642 - 52572787
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||| |||||||  |||||||||||||||||| ||||||||| |||    
T  52572642 tatacccgttacccgtcccatacccgtgttttgagatcgaggaaaactcatacccatacccaaacccagtcaaaatggggaaaacctgtcaaattgagtt 52572741  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||| ||||||||| |||| ||||||||| ||||||||    
T  52572742 tggttcgggcggataaccacgggtatgggttttgttgccatgccta 52572787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 4557360 - 4557215
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||||||||||| || |||||||| |||||||| | |||||||||| || ||||||| |||||||  ||||||| ||| ||||||||||||||||||||    
T  4557360 tatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaaacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggtt 4557261  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    | ||||||| |||||||||||| |||||||||||||||||||||||    
T  4557260 ttgttcgggtgggtaaccacgggtatgagttttgttgtcatgccta 4557215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 48305682 - 48305555
Alignment:
Q  26 gttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggt 125  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  48305682 gttccatacccgtgttttgaaattggggaaaactcatacccataaccaaacccagtcaaaatggggaaaacccgtcagattgggtttggttcgggtgggt 48305583  T
Q  126 aaccacggatatgagttttgttgtcatg 153  Q
    |||| ||| ||||  |||||||||||||    
T  48305582 aaccgcgggtatggattttgttgtcatg 48305555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 44252797 - 44252928
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||| |||||| ||||| ||||||||    
T  44252797 ccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaatttggtttgattcggacgggtaac 44252896  T
Q  129 cacggatatgagttttgttgtcatgcctactt 160  Q
    ||||| ||||  |||||||| |||||||||||    
T  44252897 cacgggtatggattttgttgccatgcctactt 44252928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 34025987 - 34026129
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||||||||||| || ||||||| ||||||||| |||||||||||| ||||||||||||||||||  ||||||| ||| |||| |||||||||||| ||    
T  34025987 tatactcgttacccgtcccatacctgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacgggaaaaaaccgtcaaattggttt 34026086  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    ||||||||| |||||||| ||| |||| ||||||||| |||||    
T  34026087 tggttcgggagggtaaccgcgggtatgggttttgttgccatgc 34026129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 48390866 - 48390727
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || ||||||||||||||||| |||||||||||| |||||||||| |||||||  ||||||| |||||||| |||||||||||| ||||||||    
T  48390866 cgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggttc 48390767  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |  ||||||||| ||| |||| ||||||||| ||||||||    
T  48390766 gaacgggtaaccgcgggtatgggttttgttgccatgccta 48390727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 22535896 - 22535754
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||| ||||||||||| || |||||||||||||||||||| |||||||  ||||||| ||||||||||| |||||||| |||    
T  22535896 tatacccgttacccgtcccatatccgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccatcaaattgagtt 22535797  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    |||||||||||| ||||| ||| |||| ||||||||| |||||    
T  22535796 tggttcgggcggataaccgcgggtatgggttttgttgccatgc 22535754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 4016099 - 4015954
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||| | || |||||||| |||||||| |||||||||||| || ||||||| |||||||| ||||||| ||| |||||||||||||||| |||    
T  4016099 tatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacccaaacctagtcaaaacgggaaaaacccgtcaaattgagtt 4016000  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    | ||||||| |||||||||||| |||| ||||||||| ||||||||    
T  4015999 tcgttcgggtgggtaaccacgggtatgggttttgttgccatgccta 4015954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 6738440 - 6738315
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    |||||||||||||| |||||||||||| |||||||||| |||||||  ||||||| ||| |||||| ||||||||||||||||||||||||||||||| |    
T  6738440 tacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaaattgggtttggttcgggcgggtaaccgc 6738341  T
Q  132 ggatatgagttttgttgtcatgccta 157  Q
    || |||| ||||| ||| ||||||||    
T  6738340 gggtatgggttttattgccatgccta 6738315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 10371317 - 10371182
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaa------ctcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcg 122  Q
    |||||||||||||||||||| ||||||||      |||||||||| | |||||||  ||||||| ||||||||||||||||||||||||||||||| |||    
T  10371317 ccatacccgtgttttgagattggggaaaatccatactcatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgagcg 10371218  T
Q  123 ggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    ||||||||||| | || |||||||||||||||||||    
T  10371217 ggtaaccacgggtctgggttttgttgtcatgcctac 10371182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 54317177 - 54317321
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || | ||||  ||||||||| ||||||||||||||| || ||||  ||||||  ||||||| ||||||||||||||||||||| ||    
T  54317177 tatacccgttacccgtcctatacttgtgttttgaaatcggggaaaactcaaacacatactcaaacccagtcaaaacggggaaaacccgtcaaattggatt 54317276  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcct 156  Q
    |||||||||||||||||||||||||||  |||||||| |||||||    
T  54317277 tggttcgggcgggtaaccacggatatggattttgttgccatgcct 54317321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 23154119 - 23153978
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||||||||||| ||||||||||||||||| || |||||||||||| |||||||||| ||||||   || |||| ||| |||||||||||||||||| |    
T  23154119 tatactcgttacccgttccatacccgtgttt-gaaatcggggaaaacccatacccatacccaaactcagttaaaacgggaaaaacccgtcaaattggggt 23154021  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    |||||| ||||||||||| ||||||||  |||||||| |||||    
T  23154020 tggttccggcgggtaaccgcggatatggattttgttgccatgc 23153978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 39728704 - 39728850
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| |||||||  | |||||||||| ||||||||||| |||||||  |||| |||| |||||||  ||||||| |||||||| |||||||||||| ||    
T  39728704 tatacccgttacccatcccatacccgtattttgagatcgaggaaaacctatactcatacccaaacccagtcaaaacggggaaaatccgtcaaattggatt 39728803  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||||| ||||||||||||| |||| ||||||||| |||||||||    
T  39728804 tggttcggacgggtaaccacgggtatgggttttgttgccatgcctac 39728850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 43582611 - 43582755
Alignment:
Q  13 atactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggttt 112  Q
    |||| ||||||| ||  |||||||||||||||| |||||||||||||||||| ||||  ||||||  || |||| || |||||||| ||||||||| |||    
T  43582611 atacacgttacccgtctcatacccgtgttttgaaatcggggaaaactcatacacatactcaaacccagtaaaaacggagaaaacccatcaaattggattt 43582710  T
Q  113 ggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||| |||||||| |||||||||  |||||||    
T  43582711 ggttcgggcgggtaaccgcggatatgggttttgttgcaatgccta 43582755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 831084 - 831179
Alignment:
Q  61 atacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcct 156  Q
    ||||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  831084 atacccatacccaaacccagtcaaaacggggaaaacccgtcaaatttggtttggtttgggcgggtaaccacggatatgagttttgttgtcttgcct 831179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 23546997 - 23546858
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||||||||| |||||||| | |||      ||||||| ||||||||||||| ||||||||||    
T  23546997 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccaaaccca------gtcaaaacggggaaaacccgttaaattgggtt 23546904  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||  |||||||||||||| |||| ||||||||| ||||||||    
T  23546903 tggttcatgcgggtaaccacgggtatgggttttgttgccatgccta 23546858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 42758414 - 42758552
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||||| ||||||||| ||||||| |||| || || |||| |||||||  || |||| |||||||| |||||||||||||||||| |||    
T  42758414 gttacccgtcccatacctgtgttttgaaatcgggggaaacccaaactcatacccaaacccagttaaaacggggaaaatccgtcaaattgggtttggatcg 42758513  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||| |||| ||||||||| ||||||||    
T  42758514 ggcgggtaaccacgggtatgggttttgttgccatgccta 42758552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 159
Target Start/End: Original strand, 19111787 - 19111914
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    |||||||||||||| |||||| |||||||| || |||| |||||||   |||||| ||| |||| |||||||||||| |||||||  || | ||||||||    
T  19111787 tacccgtgttttgaaatcgggaaaaactcaaactcatacccaaacccaatcaaaaagggaaaaatccgtcaaattggatttggtttaggtgagtaaccac 19111886  T
Q  132 ggatatgagttttgttgtcatgcctact 159  Q
    ||||||||||||||||||||||||||||    
T  19111887 ggatatgagttttgttgtcatgcctact 19111914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 23580860 - 23581001
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| ||| ||||| |||||||||| || |||||||||||||||||||| |||||||  ||||||| ||| ||||||||||||||||  ||    
T  23580860 tatacccgttacccgtttcatactcgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgaatt 23580959  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatg 153  Q
    |  ||||||| ||||||| | | |||| ||||||||||||||    
T  23580960 taattcgggcaggtaaccgcaggtatgtgttttgttgtcatg 23581001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 44106830 - 44106704
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    ||||||||||||||| |||| ||||||||| ||||| |||| |||||||  ||||||| |||||||||| ||||||||| |||| ||||||||||||||     
T  44106830 ccatacccgtgttttaagattggggaaaac-catactcatacccaaacccagtcaaaacggggaaaacc-gtcaaattgagttttgttcgggcgggtaat 44106733  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    ||||| |||| ||||||||| ||||||||    
T  44106732 cacgggtatgtgttttgttgccatgccta 44106704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 20087050 - 20087175
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||  ||||||| || ||||| |||||||||||| ||||||||  || ||||||| |    
T  20087050 tacccgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattggatttggttccagcaggtaaccgc 20087149  T
Q  132 ggatatgagttttgttgtcatgccta 157  Q
     | ||||  |||||||| ||||||||    
T  20087150 tggtatggattttgttgccatgccta 20087175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 29858571 - 29858482
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctactt 160  Q
    |||||||  ||||||| |||||||| |||| |||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  29858571 ccaaacccagtcaaaacggggaaaatccgttaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctactt 29858482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 10043331 - 10043195
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || |||||||| |||||||| | | |||||||| || ||||||| |||||||  |||||| ||| ||||||||||||||||||| |||||      
T  10043331 cgttacccgtcccatacccatgttttgaaaccagggaaaacccaaacccatacccaaacccagtcaaagtggagaaaacccgtcaaattggggttggtat 10043232  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    || |||||| ||||||||| |||| ||||||||||||    
T  10043231 ggtcgggtacccacggatacgagtattgttgtcatgc 10043195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 10823733 - 10823612
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacc 129  Q
    |||||||||||||||||||||| |||||| ||||||||      ||||| ||||||||||  ||||| ||||||||||  ||||||| |||||||||||     
T  10823733 catacccgtgttttgagatcggagaaaacccataccca------aacctagtcaaaatggaaaaaactcgtcaaattgaatttggtttgggcgggtaacg 10823640  T
Q  130 acggatatgagttttgttgtcatgccta 157  Q
    |||| |||||||||||||| ||||||||    
T  10823639 acgggtatgagttttgttgccatgccta 10823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 52198188 - 52198304
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||| |||||||||||||||| ||||| |||||||||| |||||||  |||||||  |  ||||||||||||||| ||||    
T  52198188 tatacccgttacccgtcccatacctgtgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacagaaaaaacccgtcaaattaggtt 52198287  T
Q  112 tggttcgggcgggtaac 128  Q
    ||||| |||||||||||    
T  52198288 tggtttgggcgggtaac 52198304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 34154454 - 34154542
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattg 107  Q
    |||||| ||| ||||||| |||||||| |||||||||||| ||||||||||||||||||  ||||||| |||||||| |||||||||||    
T  34154454 gttacccgtttcatacccatgttttgaaatcggggaaaacacatacccatatccaaacccagtcaaaacggggaaaatccgtcaaattg 34154542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 34119707 - 34119808
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacc 129  Q
    |||||||||||||| | |||||| |||||||| || |||| |||||||   |||||||||||||||||||||||||| | ||||||||||| || |||||    
T  34119707 catacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaatcaaaatggggaaaacccgtcaaattagatttggttcgggtggttaacc 34119806  T
Q  130 ac 131  Q
    ||    
T  34119807 ac 34119808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 17146198 - 17146064
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| ||||||||||| ||||||||||| ||  ||||| |||||||||| |||||    ||||||| ||||||| ||||||||||||| ||||||| |    
T  17146198 gttacccgttccatacccatgttttgagattggaaaaaacccatacccatacccaaat---gtcaaaacggggaaa-cccgtcaaattggatttggtttg 17146103  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    | ||||| |||||  ||||| ||||| ||||||||||||    
T  17146102 gacgggtgaccacatatatgggttttattgtcatgccta 17146064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 44172659 - 44172735
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatg 88  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||||  ||||||  |||||||||    
T  44172659 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatactcaaacccagtcaaaatg 44172735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 44179359 - 44179435
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatg 88  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||||  ||||||  |||||||||    
T  44179359 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatactcaaacccagtcaaaatg 44179435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 42243438 - 42243525
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||||||| |||| |||||| ||||| || || |||| |||||||  ||||||  ||||||||||||||||||||||||||||||    
T  42243438 catacccgtgtattgaaatcgggaaaaacccaaactcatacccaaacccagtcaaaccggggaaaacccgtcaaattgggtttggttc 42243525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 40890393 - 40890478
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    |||| ||| ||||| |||| ||||||||||||| ||||||||||||| ||||||| | | |||||||||| |||| ||||||||||    
T  40890393 tacctgtgctttgaaatcgaggaaaactcatactcatatccaaacctagtcaaaacgagaaaaacccgtccaattaggtttggttc 40890478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 53631937 - 53632082
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| ||  ||||| |||||||| | ||  ||||||||||| ||||||| | | |||   |||||| | |||||||||||||||||  |||    
T  53631937 tatacccgttacccgtctcatacacgtgttttaaaatttgggaaaactcaaacccatacctatacccattcaaaacgaggaaaacccgtcaaattaagtt 53632036  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||  || |||||||||| |||||||||| ||| ||||||||    
T  53632037 tggttcgaacgagtaaccacgggtatgagttttattgccatgccta 53632082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 49025720 - 49025837
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || |||||||||||||||||||||||||||||| || |||||            |||||||  || ||||||| ||||||||||||||||||     
T  49025720 gttacccgtcccatacccgtgttttgagatcggggaaaacccaaaccca------------gtcaaaacaggaaaaacccatcaaattgggtttggttca 49025807  T
Q  119 ggcgggtaaccacggatatgagttttgttg 148  Q
    ||||||||||||||| ||||  ||||||||    
T  49025808 ggcgggtaaccacgggtatggattttgttg 49025837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 3385907 - 3385800
Alignment:
Q  16 ctcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggt 115  Q
    ||||||||| || || |||||||||||||| || ||  |||| ||| | ||||| | |||||  ||||||  |||||||||||||| |||||||||||||    
T  3385907 ctcgttacctgtcccgtacccgtgttttgaaatgggtaaaaattcaaatccatacctaaacccagtcaaagcggggaaaacccgtcgaattgggtttggt 3385808  T
Q  116 tcgggcgg 123  Q
    ||||||||    
T  3385807 tcgggcgg 3385800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 12369102 - 12369172
Alignment:
Q  87 tggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||| ||||||||||| |||||||||||| |  ||||||||| |||| ||||||||| ||||||||    
T  12369102 tggggaaaatccgtcaaattgagtttggttcgggtgaataaccacgggtatgggttttgttgccatgccta 12369172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 2490358 - 2490403
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacc 77  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||    
T  2490358 tacccgtattttgaaatcggggaaaactcaaacccatatccaaacc 2490403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 157
Target Start/End: Original strand, 30682889 - 30682998
Alignment:
Q  48 tcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgtt 147  Q
    |||||||||||||||| ||||  |||||||  |||||||  | ||||||| ||||||||  ||||| |||| | |  ||||  ||| |||||||||||||    
T  30682889 tcggggaaaactcatatccattcccaaacccagtcaaaacagagaaaacctgtcaaattaagtttgattcgagtgaataactgcgggtatgagttttgtt 30682988  T
Q  148 gtcatgccta 157  Q
    ||||||||||    
T  30682989 gtcatgccta 30682998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 3414586 - 3414478
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || || ||| |||||||  | |||||| |||||||| ||||||| |||||||   |||||  ||||||||||  || |||||||||||||||    
T  3414586 cgttacctgtcccgtactcgtgtttgaaaatcgggaaaaactcaaacccataaccaaacccaatcaaagcggggaaaacctatcgaattgggtttggttc 3414487  T
Q  118 gggcgggta 126  Q
    ||| |||||    
T  3414486 gggtgggta 3414478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 23910289 - 23910170
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacc 129  Q
    |||| ||||||||||| |||| |||||||||| || ||||  ||||||  ||||||| ||  |||| |||||||||||  || | ||||| | |||||||    
T  23910289 catatccgtgttttgaaatcgaggaaaactcaaactcatacacaaacccagtcaaaacggaaaaaatccgtcaaattgaattcgattcggacaggtaacc 23910190  T
Q  130 acggatatgagttttgttgt 149  Q
    |||  |||| ||||||||||    
T  23910189 acgagtatgggttttgttgt 23910170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 30616332 - 30616279
Alignment:
Q  16 ctcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccata 69  Q
    ||||||||| || ||||| ||||||||||| |||||||||||| || |||||||    
T  30616332 ctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaaacccata 30616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 52200360 - 52200397
Alignment:
Q  124 gtaaccacggatatgagttttgttgtcatgcctactta 161  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  52200360 gtaaccacgggtatgagttttattgtcatgcctactta 52200397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 31126834 - 31126750
Alignment:
Q  64 cccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttg 148  Q
    |||||| |||||||   |||||| ||||||||||| |||| ||  |||||||||||| || ||||||||  |||| |||||||||    
T  31126834 cccatacccaaaccaaatcaaaacggggaaaacccatcaatttaagtttggttcgggtggttaaccacgtgtatgggttttgttg 31126750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 55438757 - 55438705
Alignment:
Q  92 aaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagtttt 144  Q
    ||||||| |||||||| ||||||||||| ||| |||||| |||||| ||||||    
T  55438757 aaaacccatcaaattgagtttggttcggacggataaccaaggatataagtttt 55438705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 2367359 - 2367504
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| ||| ||||||| ||||||||||||    
T  2367359 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacctagtcaaaacgggaaaaacccatcaaattgggtt 2367458  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||    
T  2367459 tggttcggacgggtaaccacggatatgggttttgttgccatgccta 2367504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 10188118 - 10187991
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10188118 ccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaac 10188019  T
Q  129 cacggatatgagttttgttgtcatgcct 156  Q
    ||||| |||| ||||||||| |||||||    
T  10188018 cacgggtatgggttttgttgccatgcct 10187991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 30986286 - 30986431
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||| ||||||   ||||||| |||||||||||||||||||| |||    
T  30986286 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgagtt 30986385  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  30986386 tggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 30986431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 5863438 - 5863302
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||| |||||||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  5863438 tatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 5863339  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttg 148  Q
    |||||||||| ||||||||||| |||| |||||||||    
T  5863338 tggttcgggcaggtaaccacgggtatgggttttgttg 5863302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 27534717 - 27534862
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||   |||||| |||||||||||||||||||| |||    
T  27534717 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgagtt 27534816  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||| ||| ||||||||| |||| ||||||||| ||||||||    
T  27534817 tggttcggacggttaaccacgggtatgggttttgttgccatgccta 27534862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 32853877 - 32854018
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||| || |||||||||||||||||||||    
T  32853877 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtt 32853976  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatg 153  Q
    |||||||| ||| ||||||||| |||| ||||||||| ||||    
T  32853977 tggttcggtcggataaccacgggtatgggttttgttgccatg 32854018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 3483978 - 3483831
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| |||||||  | |||||||||||||| ||||||||||||||| ||||| |||| |||||||  ||||||| ||||||||||||||||||||||||    
T  3483978 tatacccgttacccatcccatacccgtgtttcgagatcggggaaaacccatacacatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 3483879  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||||||||||||||||||| |  |||| ||||||||| ||||||||||    
T  3483878 tggttcgggcgggtaaccatgagtatgggttttgttgccatgcctact 3483831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 31496484 - 31496612
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||||| |||||||| || ||||||||    
T  31496484 ccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacgggtaac 31496583  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    ||||| |||| ||||||||| ||||||||    
T  31496584 cacgggtatgggttttgttgccatgccta 31496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 31501870 - 31501998
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||||| |||||||| || ||||||||    
T  31501870 ccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacgggtaac 31501969  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    ||||| |||| ||||||||| ||||||||    
T  31501970 cacgggtatgggttttgttgccatgccta 31501998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 10142573 - 10142424
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||| ||||||||||||||||||| |||||||||| |||||||  ||||||| | |||||||||| ||||||| |||    
T  10142573 tatacccgttacctgtcccatacccgttttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacgaggaaaacccgccaaattgagtt 10142474  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctactta 161  Q
    ||||||| |||| |||||||   |||| ||||||||| ||||||||||||    
T  10142473 tggttcgagcggataaccacaagtatgggttttgttgccatgcctactta 10142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 12141418 - 12141563
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||| ||| || ||||| |||||||||||||| ||||||||| ||||||| || |||||||  ||||||| ||||||||||||||||||||  ||    
T  12141418 tatacccgtcacccgtcccatatccgtgttttgagattggggaaaacccatacccgtacccaaacccagtcaaaacggggaaaacccgtcaaattgaatt 12141517  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||  | |||| ||||||||| ||||||||    
T  12141518 tggttcgggcgggtaaccataggtatgggttttgttgccatgccta 12141563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 12309612 - 12309763
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctg------gtcaaaatggggaaaacccgtcaaattgggttt 112  Q
    |||||| |||||||||||||||||||| ||| ||||| || |||||||||| |||||||        ||||||||||||||||| ||||||||||||| |    
T  12309612 gttacccgttccatacccgtgttttgaaatcagggaatacccatacccatacccaaacccaaacccagtcaaaatggggaaaactcgtcaaattgggtct 12309711  T
Q  113 ggttcgggcgggtaaccacggatatgagttttgttgtcatgcctacttatgt 164  Q
    ||||||||||||||||| ||| |||| | |||||||||||||||| ||||||    
T  12309712 ggttcgggcgggtaaccgcgggtatggggtttgttgtcatgcctaattatgt 12309763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 24225731 - 24225882
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctgg------tcaaaatggggaaaacccgtcaaat 105  Q
    ||||| ||||||| || ||||| |||||||||||||||||||||||  |||||||||| |||||||         |||||| |||||||||| |||||||    
T  24225731 tatacccgttacccgtcccatatccgtgttttgagatcggggaaaatccatacccatacccaaacccaaacccaatcaaaacggggaaaacctgtcaaat 24225830  T
Q  106 tgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||  |||||||||| |||||||||| || |||||||||||||||||||||||    
T  24225831 tgaatttggttcggacgggtaaccatgggtatgagttttgttgtcatgccta 24225882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 9442463 - 9442570
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||| |||||| ||| | |||||||||| |||||||  ||||||| |||||||||||||||||||| |||    
T  9442463 tatacccgttacccgtcccatacccgtgttttgaaatcgggaaaatcccatacccatacccaaacc-agtcaaaacggggaaaacccgtcaaattgagtt 9442561  T
Q  112 tggttcggg 120  Q
    |||||||||    
T  9442562 tggttcggg 9442570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 27738812 - 27738922
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||||||||||||||| |||||||||||| |||||||||| | |||||  ||||||| ||| ||||||| ||||||||  |||||||||    
T  27738812 gttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacctaaacccagtcaaaacgggaaaaacccatcaaattgaatttggttcg 27738911  T
Q  119 ggcgggtaacc 129  Q
    ||| |||||||    
T  27738912 ggcaggtaacc 27738922  T

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Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 15498375 - 15498474
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacc 129  Q
    |||||||||||||||| |||||||||||| |||| ||||| |||||||   |||||| || |||||||||| |||||||||||| ||||||||| |||||    
T  15498375 catacccgtgttttgaaatcggggaaaacccatatccatacccaaacccattcaaaacggagaaaacccgttaaattgggtttgattcgggcggataacc 15498474  T

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Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 157
Target Start/End: Original strand, 14506166 - 14506252
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||  |||||||||||||||||||||||||||| |||| ||||||  || ||||||||| |||||||||| ||||||||||||    
T  14506166 ccaaacccagtcaaaatggggaaaacccgtcaaattgagtttcgttcggatggttaaccacgggtatgagttttattgtcatgccta 14506252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 32532581 - 32532718
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || ||||||||||||||||| |||||||||||| ||||| ||||  ||||||   | |||| ||  ||||||||||||||||| |||| || ||    
T  32532581 ttacccgtcccatacccgtgttttgaaatcggggaaaacccatactcatactcaaacccaatgaaaacggaaaaaacccgtcaaattggatttgatttgg 32532680  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||| ||||| | ||||||  |||||||||||||||||    
T  32532681 gcggataaccgcagatatggattttgttgtcatgccta 32532718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 11762478 - 11762596
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||| ||||| || |||||| |||||  | | |||||||||||||  || |||||||||||||||||||||||||| ||    
T  11762478 tatacccgttacccgtcccatacccttgtttagaaatcgggaaaaacctaaatccatatccaaacccagtaaaaatggggaaaacccgtcaaattggatt 11762577  T
Q  112 tggttcgggcgggtaacca 130  Q
      ||||||||| |||||||    
T  11762578 gtgttcgggcgagtaacca 11762596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 28079745 - 28079604
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || || ||||| |||||||| |||||||||||| || ||||||| ||||||   | ||||  ||| || |||||||||| ||||||||||      
T  28079745 cgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagccaaagcgggaaatacccgtcaaaatgggtttggtat 28079646  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||| ||||| || ||| |||| ||||||||||||||||||||    
T  28079645 gggtgggtacccgcgggtatgggttttgttgtcatgcctact 28079604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 34178339 - 34178245
Alignment:
Q  63 acccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| |||||||  ||||||| |||||| |||| ||||||||||| |||||| |||||||| || ||| |||||||||| ||| ||||||||    
T  34178339 acccatacccaaaccctgtcaaaacggggaacacccatcaaattgggtatggttcaggcgggtacccgcgggtatgagttttattgccatgccta 34178245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 14034591 - 14034668
Alignment:
Q  80 gtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| ||| ||||||| ||||| ||||||| ||||||| |||||||||||| |||| ||||||||| ||||||||    
T  14034591 gtcaaaacgggtaaaacccatcaaaatgggtttagttcgggtgggtaaccacggttatgggttttgttgccatgccta 14034668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 30816329 - 30816398
Alignment:
Q  50 ggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    |||||||||||| |||||||||||||||   |||||| |||||||| || ||||||||||||||||||||    
T  30816329 ggggaaaactcaaacccatatccaaacccaatcaaaacggggaaaatccatcaaattgggtttggttcgg 30816398  T

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Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 32053121 - 32053218
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||| || |||||||| |||||||||||| |||||||| | |||      ||||||| ||||||||||||||||||||||||    
T  32053121 tatacccgttacccgtcccatatccatgttttgaaatcggggaaaacccatacccaaaccca------gtcaaaacggggaaaacccgtcaaattgggtt 32053214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 14410862 - 14410776
Alignment:
Q  72 caaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||||||| ||||||| ||| |||| |||||||||| | ||||||| || |||||||||||||| ||| |||||||||||||| |||||    
T  14410862 caaacctagtcaaaacggg-aaaatccgtcaaattagatttggtttggacgggtaaccacggacatgggttttgttgtcatgtctact 14410776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 24602864 - 24602777
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||||  |||||||  ||||||| ||||||||||| |||| ||||||| |||||||||||  ||||  ||||||||||||||||||    
T  24602864 ccaaacccagtcaaaacagggaaaaaccgtcaaattgagtttcgttcgggtgggtaaccacgtgtatggattttgttgtcatgcctac 24602777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 20349184 - 20349242
Alignment:
Q  99 gtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||||||||| |||| |||| | |||||||||| ||||||||||||    
T  20349184 gtcaaattgggtttggttcgggcaggtagccacaggtatgagttttattgtcatgccta 20349242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 9402685 - 9402754
Alignment:
Q  88 ggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||| || ||||||||||||||||||||||||||| ||  || ||||||| ||||| |||||||||    
T  9402685 ggggaaaatccatcaaattgggtttggttcgggcgggtacccgtgggtatgagtattgttatcatgccta 9402754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 12678141 - 12678004
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || ||||||| |||| |||| |||||||||||| || || |||| |||||||  ||||||| || ||||||| ||| |  | |||||||||| |    
T  12678141 ttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatacccaaacccagtcaaaacggcgaaaacctgtcgagataggtttggttcag 12678042  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    | |||||||||||| |||| | |||| || ||||||||    
T  12678041 gtgggtaaccacggttatgggatttgctgccatgccta 12678004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 160
Target Start/End: Original strand, 29341324 - 29341437
Alignment:
Q  47 atcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgt 146  Q
    |||||| ||||| || || ||||||||||||   |||||| || |||||| | |||||||| ||||| |||| ||| ||| || |||||||| |||||||    
T  29341324 atcgggaaaaacccaaactcatatccaaacccaatcaaaacggagaaaactcatcaaattgagtttgattcgagcgagtacccgcggatatgggttttgt 29341423  T
Q  147 tgtcatgcctactt 160  Q
    || |||||||||||    
T  29341424 tgccatgcctactt 29341437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 14255008 - 14255135
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||||||| || ||| | ||||||||| ||||||| |||||||  ||||||| | |||||| | |||||| |||||||| |||| | |||||||    
T  14255008 ccatacccgtgttt-gaaatcagagaaaactcaaacccatacccaaacccagtcaaaacgaggaaaatctgtcaaaatgggtttgattcgagtgggtaac 14255106  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    ||||  ||||  |||||||  ||||||||    
T  14255107 cacgagtatggattttgttagcatgccta 14255135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 27447932 - 27447865
Alignment:
Q  158 cttatgtttttgctgctttgcaattgtggtccttttatccaattttaactaggtcaacgcttgaatgg 225  Q
    |||||||||| ||  ||||||||| |||||| |||| ||||||||| ||| ||||||||||| |||||    
T  27447932 cttatgttttagcccctttgcaatagtggtctttttgtccaattttgacttggtcaacgcttaaatgg 27447865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 13769111 - 13769209
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggtt 116  Q
    ||||||| || |||||||| ||||||||  |||||||||||  | ||||||| | |||||  ||||||  | | ||||||||| |||||||||||||||    
T  13769111 cgttacccgtcccatacccatgttttgaagtcggggaaaaccgaaacccatacctaaacccagtcaaagcgagtaaaacccgtgaaattgggtttggtt 13769209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 21018475 - 21018413
Alignment:
Q  190 ttttatccaattttaactaggtcaacgcttgaatggcatgccacatatgtaattacttattta 252  Q
    |||| ||||||||| |||  |||||||||||  | |||||||||||||||||||||| |||||    
T  21018475 ttttctccaattttgactcagtcaacgcttgtgtagcatgccacatatgtaattactgattta 21018413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 7393885 - 7393836
Alignment:
Q  81 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacca 130  Q
    ||||||||||||||| |||||||||||| |||| ||||| || |||||||    
T  7393885 tcaaaatggggaaaatccgtcaaattggatttgattcggacgtgtaacca 7393836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 14410910 - 14410861
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactca 61  Q
    ||||| ||||||| || ||||||||||||||||| ||| |||||||||||    
T  14410910 tatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactca 14410861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 34345987 - 34345926
Alignment:
Q  91 gaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcat 152  Q
    |||||||  |||||||| | ||||||||| |||||| |||||  ||||||||||||||||||    
T  34345987 gaaaaccaatcaaattgagcttggttcggacgggtacccacgagtatgagttttgttgtcat 34345926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 32959950 - 32960026
Alignment:
Q  81 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||| | |||||| |||||||||| |||||| |||||| ||||| || |   |||||||| ||||||||||||||    
T  32959950 tcaaaacgaggaaaatccgtcaaattaggtttgattcgggtgggtacccgcatgtatgagttatgttgtcatgccta 32960026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 4583152 - 4583297
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||   |||||| ||||||||||||||||||||||||    
T  4583152 tatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggggaaaacccgtcaaattgggtt 4583251  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||    
T  4583252 tggttcgggcgggtaaccgtggatatgagttttgttgccatgccta 4583297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 4920859 - 4921004
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||| || |||||||||||||||||||||    
T  4920859 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtt 4920958  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  4920959 tggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 4921004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 33728057 - 33727910
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||  ||||||||||||||||||   |||||| |||||||| |||||||||||||||    
T  33728057 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaatccatacccatatccaaacccaatcaaaacggggaaaatccgtcaaattgggtt 33727958  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    |||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  33727957 tggttcgggcgggtaaccacgggtatgggttttgttgccatgcctact 33727910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 5908744 - 5908598
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||||||    
T  5908744 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaatggggaaaacccgtcaaattgggtt 5908645  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||||||||| ||||||||| ||||  |||||||| |||||||||    
T  5908644 tggttcgggcggataaccacgggtatggattttgttgccatgcctac 5908598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 10127124 - 10127253
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  10127124 ccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcggataac 10127223  T
Q  129 cacggatatgagttttgttgtcatgcctac 158  Q
    ||||| ||||  ||||||||||||||||||    
T  10127224 cacgggtatggattttgttgtcatgcctac 10127253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 29245990 - 29245861
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    ||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  29245990 ccatacccgtgttttgaaatcggagaaaactcatacccatacccaaacctagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaac 29245891  T
Q  129 cacggatatgagttttgttgtcatgcctac 158  Q
    | ||| |||| |||||||||||||| ||||    
T  29245890 cgcgggtatgggttttgttgtcatgtctac 29245861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 15890239 - 15890384
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||| ||||| |||||| ||||| |||| |||||||| ||||||| ||| ||||||||||||||||| ||    
T  15890239 tatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccatacacatagccaaacctagtcaaaacgggaaaaacccgtcaaattggatt 15890338  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||| ||  |||| ||||||||||||||||||    
T  15890339 tggttcgggcgggtaaccgcgagtatgggttttgttgtcatgccta 15890384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 13402059 - 13401915
Alignment:
Q  13 atactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggttt 112  Q
    |||| ||||||| |||||||||||||||||  | |||||| |||||||||||||||| |||||||| ||||||| ||  |||| ||||||||||||||||    
T  13402059 atacccgttacccgttccatacccgtgtttgaaaatcgggaaaaactcatacccatacccaaacctagtcaaaacggaaaaaatccgtcaaattgggttt 13401960  T
Q  113 ggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  13401959 ggttcgggcgggtaaccgcgggtatgggttttgttgccatgccta 13401915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 12866600 - 12866471
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || |||||||| |||||||| ||||| ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||||    
T  12866600 gttacccgtcccatacccatgttttgaaatcggagaaaactcatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattggatttggttcg 12866501  T
Q  119 ggcgggtaaccacggatatgagttttgttg 148  Q
    | |||||||||||   |||| |||||||||    
T  12866500 gacgggtaaccacatgtatgggttttgttg 12866471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 40517839 - 40517984
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| |||||||  | |||||||||||||||| ||||||||||||| |||||||||| |||||||  ||||||| ||| |||| |||||||||||  ||    
T  40517839 tatacccgttacccatcccatacccgtgttttgggatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaatccgtcaaattgaatt 40517938  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||| ||||||||||||||| |||| ||||||||| ||||||||    
T  40517939 tggttcaggcgggtaaccacgggtatgggttttgttgccatgccta 40517984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 20973552 - 20973410
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| |||||||  | ||||||||||||||  | |||||||||||| |||||||||| |||||||  ||||||| ||||||||||||||| | ||||||    
T  20973552 tatacccgttacccatcccatacccgtgtttgaaaatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcagaatgggtt 20973453  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    |||||||||||||||||| ||| |||| ||||||||| |||||    
T  20973452 tggttcgggcgggtaaccgcgggtatgggttttgttgccatgc 20973410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 152
Target Start/End: Complemental strand, 6092565 - 6092445
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||   |||||| ||||||||||||| ||||||  ||||||||||||||||||||      
T  6092565 tacccgtgttttgagatcgggaaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgttaaattgaatttggttcgggcgggtaaccta 6092466  T
Q  132 ggatatgagttttgttgtcat 152  Q
    || ||||||||||||||||||    
T  6092465 gggtatgagttttgttgtcat 6092445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 22694940 - 22694817
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||| ||||||||||||||||| | |||||||||| |||||||  || |||| ||| |||  ||||||||||||||||||||||||||||||||    
T  22694940 ccatacccgtattttgagatcggggaaacc-catacccatacccaaacccagttaaaacgggaaaattccgtcaaattgggtttggttcgggcgggtaac 22694842  T
Q  129 cacggatatgagttttgttgtcatg 153  Q
    ||||| |||| ||||||||| ||||    
T  22694841 cacgggtatgggttttgttgccatg 22694817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 17853342 - 17853204
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || |||||||||||||| || |||||||||||| |||| ||||| |||||||   |||||| ||||||||||||||||||| ||||||||||    
T  17853342 cgttacccgtcccatacccgtgttt-gaaatcggggaaaacccatatccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttc 17853244  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
     || |||||||| ||| |||| ||||||||| ||||||||    
T  17853243 aggtgggtaaccgcgggtatgcgttttgttgccatgccta 17853204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 12834623 - 12834511
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||| || |||||||| || || |||||| |||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||||    
T  12834623 gttacccgtcccatatccatgttttgaaattggagaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgagtttggttcg 12834524  T
Q  119 ggcgggtaaccac 131  Q
    | |||||||||||    
T  12834523 gacgggtaaccac 12834511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 18207058 - 18207196
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || |||||| || ||||||| |||| ||||||| || || |||  |||||||  ||||||| ||| ||||| ||||||||||||||||||| |    
T  18207058 gttacctgtcccatacacgagttttgaaatcgaggaaaacccaaactcatgcccaaacccagtcaaaacgggaaaaacacgtcaaattgggtttggtttg 18207157  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    || |||||||||||| |||||||||||||| ||||||||    
T  18207158 ggtgggtaaccacgggtatgagttttgttgccatgccta 18207196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 159
Target Start/End: Complemental strand, 42987518 - 42987389
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||||||||||||||||||||||  ||||||| || ||||||   ||||||| ||| |||||||| |||||||  |||||||||| ||| | ||    
T  42987518 ccatacccgtgttttgagatcggggaaaatccatacccgtacccaaactcagtcaaaacgggaaaaacccgccaaattgaatttggttcggacggat-ac 42987420  T
Q  129 cacggatatgagttttgttgtcatgcctact 159  Q
    |||| ||||| ||||||||| ||||||||||    
T  42987419 cacgaatatgggttttgttgccatgcctact 42987389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 16311325 - 16311204
Alignment:
Q  36 cgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggat 135  Q
    |||||||||| |||||  |||||||| || ||||||||||||   |||||  ||| |||| |||||||||| |||||||||| |||||||| || |||||    
T  16311325 cgtgttttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaagcgggaaaaaaccgtcaaattaggtttggttcaggcgggtacccgcggat 16311226  T
Q  136 atgagttttgttgtcatgccta 157  Q
    |||||||||||||| |||||||    
T  16311225 atgagttttgttgttatgccta 16311204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 30996629 - 30996773
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||| |||||||| | ||||| |||||| ||||| |||| |||||||  ||||||| ||| |||| |||||||||||||||    
T  30996629 tatacccgttacctgtcccatactcgtgttttaaaatcggagaaaacccatactcatacccaaacccagtcaaaacggg-aaaatccgtcaaattgggtt 30996727  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||| ||| |||||   |||||| ||||||||| ||||||||    
T  30996728 tggttcggacggataaccgtagatatgggttttgttgccatgccta 30996773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 35311926 - 35311991
Alignment:
Q  92 aaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  35311926 aaaatccgtcaaattgggtttggttcgggcgggtaaccgcggatatgagttttattgtcatgccta 35311991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 6369745 - 6369873
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||| ||| |||||| ||| ||||||||||||||||||  ||||||    |||||| | | |||| |||||||||| ||||||||||| |||||||||    
T  6369745 ccatactcgtattttgaaatcagggaaaactcatacccatgcccaaactcaatcaaaacgagaaaaaaccgtcaaattaggtttggttcgagcgggtaac 6369844  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    ||   ||||||||||||||||||||||||    
T  6369845 cataaatatgagttttgttgtcatgccta 6369873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 42717643 - 42717551
Alignment:
Q  55 aaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgtt 147  Q
    |||| |||||||||| ||||| |  ||||||| ||| |||||||||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  42717643 aaacccatacccatacccaaatccagtcaaaacgggaaaaacccgtcaaattgggtttggttcggacgggtaaccacaggtatgagttttgtt 42717551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 157
Target Start/End: Original strand, 12447461 - 12447546
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||  ||||||||||||||| || |||||||||||||||||||||| |||||||||||| |||| ||||||||| ||||||||    
T  12447461 ccaaacccagtcaaaatggggaaatcc-gtcaaattgggtttggttcgggtgggtaaccacgggtatgggttttgttgccatgccta 12447546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 6155957 - 6155831
Alignment:
Q  31 atacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacca 130  Q
    ||||||||||||||| |||||||||||| || || |||| |||||||  ||||||| |  |||||||||| ||||| | |||||| |||| || |||||     
T  6155957 atacccgtgttttgaaatcggggaaaacccaaacacatacccaaacccagtcaaaacgaagaaaacccgttaaatttgatttggtacgggtggataaccg 6155858  T
Q  131 cggatatgagttttgttgtcatgccta 157  Q
    | | |||||||||||||| ||||||||    
T  6155857 caggtatgagttttgttgccatgccta 6155831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 159
Target Start/End: Original strand, 39422396 - 39422526
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    ||||||||||||||||| |||| | ||||| || || ||||||||||||   |||||  |||||||||| ||||| |||||| |||||||||||| || |    
T  39422396 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtggttcgggcggttacc 39422495  T
Q  129 cacggatatgagttttgttgtcatgcctact 159  Q
    ||| | |||||| ||||||| |||| |||||    
T  39422496 cacaggtatgagctttgttgccatgtctact 39422526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 153
Target Start/End: Original strand, 1218806 - 1218899
Alignment:
Q  60 catacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatg 153  Q
    |||||||||| |||||||  ||||||||||  ||||| ||||||||||| ||||||||| |||||||||| ||| |||| ||||||||| ||||    
T  1218806 catacccatacccaaacccagtcaaaatggaaaaaactcgtcaaattggatttggttcgagcgggtaaccgcgggtatgggttttgttgccatg 1218899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 3564770 - 3564655
Alignment:
Q  36 cgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggat 135  Q
    |||||||||| ||||| |||||  |||||||||| |||||||  ||||||| ||| ||||||||||||||||| ||||||||||||||| |||| ||  |    
T  3564770 cgtgttttgaaatcggagaaaatccatacccatacccaaacccagtcaaaacggg-aaaacccgtcaaattggatttggttcgggcggg-aaccgcgagt 3564673  T
Q  136 atgagttttgttgtcatg 153  Q
    |||  |||||||||||||    
T  3564672 atggattttgttgtcatg 3564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 18451903 - 18451834
Alignment:
Q  88 ggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||| |||||||||||||| |||| | |||||  |||| ||||||||||||||||||    
T  18451903 ggggaaaacccgtcaaactgggtttggttcggacgggaacccacgtgtatgggttttgttgtcatgccta 18451834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 40187692 - 40187580
Alignment:
Q  33 acccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacg 132  Q
    ||||||||||||| || ||||||||| || || ||| ||||||||  ||||||  | ||||||||||||||| || ||||||||||| |||||| || |     
T  40187692 acccgtgttttgaaattggggaaaacccaaactcatttccaaacccagtcaaagcgaggaaaacccgtcaaaatgagtttggttcggacgggtacccgca 40187593  T
Q  133 gatatgagttttg 145  Q
    | |||||||||||    
T  40187592 ggtatgagttttg 40187580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 6810259 - 6810321
Alignment:
Q  92 aaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    |||| ||||||||||| ||||||||||| |||||| ||||||||||| ||||||||| |||||    
T  6810259 aaaatccgtcaaattgagtttggttcggacgggtatccacggatatgggttttgttgccatgc 6810321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 23045027 - 23044933
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggta 126  Q
    ||||||| |||||| ||||||||||||  | ||||||| ||||||   |||||| |||| |||||||||||||| ||| |||||| |||||||||    
T  23045027 tacccgtattttgaaatcggggaaaacctaaacccatacccaaactcagtcaaattgggaaaaacccgtcaaatcggggttggtttgggcgggta 23044933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 35193977 - 35193912
Alignment:
Q  92 aaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||| ||||||||||||||||| || |||||||||||||||  |||||||||||||| ||| ||||    
T  35193977 aaaatccgtcaaattgggtttgatttgggcgggtaaccacgagtatgagttttgttgccataccta 35193912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 38006478 - 38006391
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||||  |||||||||| ||||||||||||||| || ||||||| ||||||||||| || | |||  ||||||||| |||| ||||    
T  38006478 ccaaacccagtcaaaatggagaaaacccgtcaaatcggatttggttagggcgggtaacaacaggtataggttttgttgccatgactac 38006391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 2412765 - 2412687
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattg 107  Q
    ||||||||||||||||| || ||| |||| ||| ||||||| ||||||    ||||||||||||||| |||||||||||    
T  2412765 ccatacccgtgttttgaaattgggaaaaattcaaacccatacccaaactcaatcaaaatggggaaaatccgtcaaattg 2412687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 2681277 - 2681394
Alignment:
Q  40 ttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatga 139  Q
    |||||| |||||||||||| || || |||  ||||||   ||||||  |||||||||||||||||||| | |||||| || |||||| ||| ||  | ||    
T  2681277 ttttgaaatcggggaaaacccaaactcatgcccaaactcagtcaaatcggggaaaacccgtcaaattgaggttggtttggacgggtacccatgggcacga 2681376  T
Q  140 gttttgttgtcatgccta 157  Q
    ||||||||| ||||||||    
T  2681377 gttttgttgccatgccta 2681394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 27088410 - 27088284
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||||| || | |||| |||||||  | || |||| |||||||| || |||| |||||||  |||||||| || |||||||||||| || |||     
T  27088410 ccatacccgtgtcttaaaatcgaggaaaacctaaacacatacccaaacctagttaaaacggggaaa--ccgtcaaaatgagtttggttcgggtggataat 27088313  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    ||||| ||||  |||||||| ||||||||    
T  27088312 cacgggtatggattttgttgccatgccta 27088284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 28569071 - 28568930
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || || ||||||  |||||| |||||||||||  || || |||| |||||||  ||||||   ||||||||||||||||| | |  |||||     
T  28569071 cgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtcaaatcagggaaaacccgtcaaatcgaggatggttt 28568972  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    |||||| || ||||| | ||| ||||||||| ||||||||||    
T  28568971 gggcggctacccacgaacatgggttttgttgccatgcctact 28568930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 24207731 - 24207781
Alignment:
Q  26 gttccatacccgtgttttgagatcggggaaaactcatacccatatccaaac 76  Q
    |||| ||||| ||||||||| ||||||||||||||| ||||||| ||||||    
T  24207731 gttcgatacctgtgttttgaaatcggggaaaactcaaacccatacccaaac 24207781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 12251071 - 12251136
Alignment:
Q  99 gtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctacttatgt 164  Q
    ||||||| ||| |||||| ||| ||||| ||| ||  ||||||||||||| |||||||||||||||    
T  12251071 gtcaaatcggggttggtttgggtgggtacccatgggcatgagttttgttgccatgcctacttatgt 12251136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 27900449 - 27900392
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacc 77  Q
    ||||| || |||||||| |||||||| |||||| |||||||| ||| |||||||||||    
T  27900449 ttacccgtcccatacccatgttttgaaatcgggaaaaactcaaacctatatccaaacc 27900392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 35584228 - 35584293
Alignment:
Q  92 aaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||  ||||||||| || | |||| || ||  |||||||||||||||||||||||    
T  35584228 aaaacccgtcaaatgaggtttggtttggaccggtatccgcgagtatgagttttgttgtcatgccta 35584293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 9e-48; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 32303094 - 32303242
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  32303094 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 32303193  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctactt 160  Q
    || ||||||||||||||||||| |||| ||||||||| |||||||||||    
T  32303194 tgtttcgggcgggtaaccacgggtatgggttttgttgccatgcctactt 32303242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 27932446 - 27932592
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||  || ||||||||||||||||| |||||||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  27932446 tatacccgttactcgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 27932545  T
Q  112 tggttcgggcgggtaa-ccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||| || ||| |||||||||||||||||||||||    
T  27932546 tggttcgggcgggtaacccgcgggtatgagttttgttgtcatgccta 27932592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 24927982 - 24928127
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| ||  ||||||||||||| |||||| |||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  24927982 tatacccgttacccgtctcatacccgtgtttcgagatcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 24928081  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  24928082 tggttcgggcgggtaaccgcgggtatgggttttgttgccatgccta 24928127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 2075872 - 2075744
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||| ||||||||||||||| ||||| |||||||||| |||||||  ||||||| || ||||| ||||||||||||||||||||| ||||||||||    
T  2075872 ccatacccatgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggttcaggcgggtaac 2075773  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||| ||||||||    
T  2075772 cacggatatgagttttgttgccatgccta 2075744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 4230785 - 4230666
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||  || ||||||| |||||||||||||||||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  4230785 tatacccgttactcgtcccatacctgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtt 4230686  T
Q  112 tggttcgggcgggtaaccac 131  Q
    ||||||||||||||||||||    
T  4230685 tggttcgggcgggtaaccac 4230666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 20399625 - 20399770
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||| ||||| |||||| || ||||||| |||||||  ||||||| ||||||||| ||||||||||||||    
T  20399625 tatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccaaacccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtt 20399724  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| |||||||||||||| |||  ||||||||| ||||||||    
T  20399725 tggttcgagcgggtaaccacgggtattggttttgttgccatgccta 20399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 37961010 - 37960869
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||||||||||||| | |||||||||||| || || |||| |||||||| ||||||| ||| ||||||| ||||||| |||| ||||||    
T  37961010 gttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcatacccaaacctagtcaaaacgggaaaaacccatcaaattaggttcggttcg 37960911  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgcctactt 160  Q
    || ||||||| |||||||||||||||| ||||||||||||||    
T  37960910 ggtgggtaactacggatatgagttttgatgtcatgcctactt 37960869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 40248408 - 40248281
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacc 129  Q
    |||||||||||||||| ||||||||||||  ||||||||| |||||||  ||||||| ||| |||||||||||||||||||||||||| |||| ||||||    
T  40248408 catacccgtgttttgaaatcggggaaaacatatacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggtttggttcaggcgagtaacc 40248309  T
Q  130 acggatatgagttttgttgtcatgccta 157  Q
     ||| |||| ||||||||||||| ||||    
T  40248308 gcgggtatgggttttgttgtcataccta 40248281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 1063540 - 1063691
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctg------gtcaaaatggggaaaacccgtcaaat 105  Q
    ||||| ||||| | || ||||||||||||||||| |||||| ||||| |||||||||| ||| |||        ||||||| ||||||||||||||||||    
T  1063540 tatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccacacccacacccagtcaaaacggggaaaacccgtcaaat 1063639  T
Q  106 tgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
     ||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  1063640 cgggtttggttcgggcgggtaaccacgggtatgagttttgttgccatgccta 1063691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 17220762 - 17220892
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    ||||||||||||||||| |||||||||||  |||||||||| ||||||   ||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  17220762 ccatacccgtgttttgaaatcggggaaaatccatacccatacccaaactcagtcaaaatggggaaaacccgtcaaattggatttggttcgtgcgggtaac 17220861  T
Q  129 --cacggatatgagttttgttgtcatgccta 157  Q
      | ||| |||  ||||||||||||||||||    
T  17220862 cgcgcgggtataggttttgttgtcatgccta 17220892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 39445625 - 39445506
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || ||||||||||||||||| |||||| ||||| |||||||||| |||||||| ||||||| |||||||| ||||||||||| |||||||||    
T  39445625 cgttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacctagtcaaaacggggaaaatccgtcaaattgagtttggttc 39445526  T
Q  118 gggcgggtaaccacggatat 137  Q
    || || |||||| |||||||    
T  39445525 ggacgagtaaccgcggatat 39445506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 35215569 - 35215713
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||||||||||| ||  |||||||||||||||| |||||| ||||| || |  |||| ||||||| |||||||| ||| |||||| |||||||||||||    
T  35215569 tatactcgttacccgtctcatacccgtgttttgaaatcggg-aaaacccaaaatcatacccaaacccggtcaaaacgggaaaaaccggtcaaattgggtt 35215667  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||| |||| |||||||||||||||||| |||||||||  |||||||    
T  35215668 tgggtcggacgggtaaccacggatatgggttttgttgctatgccta 35215713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 34777113 - 34777238
Alignment:
Q  26 gttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggt 125  Q
    ||||||||||||||||||||||||||| ||||| |||||||| | |||      ||||||| ||| ||||||||| |||||||||||||||||| |||||    
T  34777113 gttccatacccgtgttttgagatcgggaaaaacccatacccaaaccca------gtcaaaacgggaaaaacccgttaaattgggtttggttcggacgggt 34777206  T
Q  126 aaccacggatatgagttttgttgtcatgccta 157  Q
    || ||||| |||||||||||||| ||||||||    
T  34777207 aatcacgggtatgagttttgttgccatgccta 34777238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 29108877 - 29108760
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||| |||||| | |||||| ||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  29108877 tatacccgttacccgtcccatacccatgttttaaaatcgggaaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 29108778  T
Q  112 tggttcgggcgggtaacc 129  Q
    |||||||| || ||||||    
T  29108777 tggttcggacgagtaacc 29108760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 5858706 - 5858566
Alignment:
Q  13 atactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggttt 112  Q
    |||| ||||||| || ||||||||||||||| | |||||| ||||| || ||||||| |||||||   |||||| ||||||||||||||||||||| |||    
T  5858706 atacccgttacccgtcccatacccgtgtttttaaatcgggaaaaacccaaacccatacccaaacccaatcaaaacggggaaaacccgtcaaattggattt 5858607  T
Q  113 ggttcgggcgggtaaccacggatatgagttttgttgtcatg 153  Q
    ||||||||  ||||||||| | ||||  |||||||| ||||    
T  5858606 ggttcgggtaggtaaccacaggtatggattttgttgccatg 5858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 43113674 - 43113536
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || |||| |||||||||||| |||||| ||||| ||  | ||||  ||||||  ||||||   |||||||||||| |||||||||||||||||    
T  43113674 gttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaatctcatacgcaaacccagtcaaagcagggaaaacccgttaaattgggtttggttcg 43113575  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    || |||||||||||| |||||||||| ||| ||||||||    
T  43113574 ggtgggtaaccacgggtatgagttttattgccatgccta 43113536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 45236106 - 45236244
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || ||||||||||||||||| ||| |||||||||||||||||||  |||||   ||||||| ||||||||||||||||||||| ||||| || |    
T  45236106 ttacccgtcccatacccgtgttttgaaatcagggaaaactcatacccatactcaaactcagtcaaaacggggaaaacccgtcaaattggttttggctcag 45236205  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
     | ||||||  ||| | || ||||||||| |||||||||    
T  45236206 acaggtaactgcgggtttgggttttgttgccatgcctac 45236244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 24870079 - 24869934
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| ||  |||||||||||||| | ||||||||||||||||| ||||| |||||    ||||||| ||| ||||||||||||||||| ||    
T  24870079 tatacccgttacccgtcacatacccgtgttttaaaatcggggaaaactcatagccatacccaaattcagtcaaaacgggaaaaacccgtcaaattggatt 24869980  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    || |||| |||| |||||  || | || ||||||||||||||||||    
T  24869979 tgattcgagcggataaccgtgggtgtgggttttgttgtcatgccta 24869934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 17469288 - 17469421
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||| |||||||||||| || |||||            ||||||| |||||||| |||||||||||||||    
T  17469288 tatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaaccca------------gtcaaaacggggaaaatccgtcaaattgggtt 17469375  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||| ||||||| |||| |||| ||||||||| ||||||||    
T  17469376 tggttcgggtgggtaactacgggtatgggttttgttgccatgccta 17469421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 27777246 - 27777108
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || || |||| ||||||||| |||||| |||||||| || |||| |||||||  ||||||| || ||||||||||||||||  ||||||||||    
T  27777246 gttacctgtcccgtacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaaacggagaaaacccgtcaaattaagtttggttcg 27777147  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |   |||| |  ||| |||||||||||||||||||||||    
T  27777146 gataggtacctgcgggtatgagttttgttgtcatgccta 27777108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 34139503 - 34139630
Alignment:
Q  35 ccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggttt------ggttcgggcgggtaac 128  Q
    ||||||||| | |||||||||||| || || |||| |||||||  ||||||| | |||||||||||||||||||||||      ||||||||||| ||||    
T  34139503 ccgtgtttttaaatcggggaaaac-caaacacatacccaaacccagtcaaaacgaggaaaacccgtcaaattgggtttgagtttggttcgggcggataac 34139601  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    ||||| |||||||||||||||| ||||||    
T  34139602 cacgggtatgagttttgttgtcgtgccta 34139630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 36131896 - 36131839
Alignment:
Q  100 tcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  36131896 tcaaattaggtttggttcgggtgggtaaccacggatatgaattttgttgtcatgccta 36131839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 15068637 - 15068497
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || || ||||||| |||||| |||||||||||| |  ||||||| ||| |||  ||||||  |||||||||||||||||| ||| ||||||     
T  15068637 cgttacctgtcccgtacccgtattttgaaatcggggaaaacccgaacccatacccagacccagtcaaatcggggaaaacccgtcaaatcggggttggttt 15068538  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    ||||||||| ||| ||  | | ||||||||| |||||||||    
T  15068537 gggcgggtacccatgggcacgggttttgttgccatgcctac 15068497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 1012686 - 1012796
Alignment:
Q  47 atcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgt 146  Q
    |||||||||||| || || |||| ||||||    |||||| | |||||||||||||||||||||||| |||||| |||||||||||| ||||  |||| |    
T  1012686 atcggggaaaacccaaactcatacccaaactcaatcaaaacgaggaaaacccgtcaaattgggtttgattcgggtgggtaaccacgggtatggattttat 1012785  T
Q  147 tgtcatgccta 157  Q
    || ||||||||    
T  1012786 tgccatgccta 1012796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 11255019 - 11254925
Alignment:
Q  63 acccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| |||||||| ||||||| ||  ||||||||||||||||| |||||||||| | ||||||| |   |||| ||||||||||||||||||    
T  11255019 acccatacccaaacctagtcaaaacggaaaaaacccgtcaaattggatttggttcggacaggtaaccgcatgtatgggttttgttgtcatgccta 11254925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14155584 - 14155670
Alignment:
Q  31 atacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||||||||||| |||||| ||||| || || |||| |||||||  |||| |  ||||||||||||||||||||||||||||||    
T  14155584 atacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgtcaaattgggtttggttc 14155670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 14687449 - 14687573
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    ||||||| ||||||||| |||||||||||| || | ||||| |||||||   ||||| ||||||||||||| ||||||||||| ||||  ||  || | |    
T  14687449 ccatacctgtgttttgaaatcggggaaaacccaaatccatacccaaacccaatcaaagtggggaaaacccgccaaattgggttaggttttggtaggcacc 14687548  T
Q  129 cacggatatgagttttgttgtcatg 153  Q
    | ||| |||| ||||||||||||||    
T  14687549 cgcgggtatgggttttgttgtcatg 14687573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 29416174 - 29416097
Alignment:
Q  80 gtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||||| ||  |  ||||| |||||||| ||||||||    
T  29416174 gtcaaaacggggaaaacccgtcaaattggatttggttcgggtgggtacccgggagtatgaattttgttgccatgccta 29416097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 15173915 - 15173793
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    ||||||| |||||| |||||| |||||||| || |||| |||||||  ||||||   | ||||||||||||||| | | |||||| ||||||||| |||     
T  15173915 tacccgtattttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaatcagagaaaacccgtcaaatcgaggttggtttgggcgggtacccat 15173816  T
Q  132 ggatatgagttttgttgtcatgc 154  Q
    ||||| |  |||||||| |||||    
T  15173815 ggataaggattttgttgccatgc 15173793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 14186410 - 14186487
Alignment:
Q  81 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||| || |||||||||||||||  |||||| || |  || |||||||||  ||||||||||||||||||||||||    
T  14186410 tcaaaacggagaaaacccgtcaaatcaggtttgattagaacgagtaaccacgagtatgagttttgttgtcatgcctac 14186487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 24568971 - 24569115
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| || |||| || |||||||| |||| ||| |||||| ||||  |||||||||| | |||||   |||||  ||||||||||||||||||| ||||    
T  24568971 tatacccgctacctgtcccatacccatgttgtgaaatcgggaaaaatccatacccatacctaaacccaatcaaac-ggggaaaacccgtcaaattaggtt 24569069  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||   | ||| |||   |||| ||||||||||||||||||    
T  24569070 tggttcggatagataatcacatgtatgtgttttgttgtcatgccta 24569115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 29089888 - 29089953
Alignment:
Q  92 aaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||||| |||||| |||||||||   ||||| | ||||||| ||||||||    
T  29089888 aaaacccgtcaaattgggtttgattcgggtgggtaaccataaatatgggctttgttgccatgccta 29089953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 28345544 - 28345671
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    |||||||||||||  |||||| ||||  || ||| ||| | |||||  ||||||  ||| |||||||||||||  || |||||||||||||||||  | |    
T  28345544 tacccgtgttttggaatcgggtaaaatccaaacctataccgaaacccagtcaaagcgggaaaaacccgtcaaaaaggatttggttcgggcgggtagtcgc 28345643  T
Q  132 gg--atatgagttttgttgtcatgccta 157  Q
    ||  ||||||||||||||| ||||||||    
T  28345644 gggtatatgagttttgttgccatgccta 28345671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 3819569 - 3819655
Alignment:
Q  158 cttatgtttttgctgctttgcaattgtggtccttttatccaattttaactaggtcaacgcttgaatggcatgccacatatgtaatta 244  Q
    |||||||||| ||  ||||| ||| || ||| |||| ||||| ||| ||| |||||||||||  |||||||||||||| ||||||||    
T  3819569 cttatgttttagcccctttgtaatagtagtctttttttccaaatttgacttggtcaacgcttagatggcatgccacatgtgtaatta 3819655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 17084117 - 17084027
Alignment:
Q  63 acccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatg 153  Q
    ||||| ||| |||||  ||||||  |||||||||||||||| |||  ||||||||||| ||||| ||||   |||| ||||||||||||||    
T  17084117 acccaaatcaaaacccagtcaaagcggggaaaacccgtcaacttgaatttggttcgggtgggtacccacaagtatgggttttgttgtcatg 17084027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 6388551 - 6388470
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttg 113  Q
    |||||||||||| | ||||||||| || || ||||||| ||||||   ||||||| || |||| |||||||||||| |||||    
T  6388551 tacccgtgttttaaaatcggggaagacccaaacccatacccaaactcagtcaaaacggagaaagcccgtcaaattgagtttg 6388470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 9642400 - 9642351
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcataccca 67  Q
    ||||||| || ||||||||||||||||| |||||||||||| || |||||    
T  9642400 cgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaaccca 9642351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 51421899 - 51422039
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || |||||||||||||||||||||||| ||||| |||||||||| |||||||  ||||||||||||||||||| |||||||||||||||||||    
T  51421899 gttacccgtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaatggggaaaacccatcaaattgggtttggttcg 51421998  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||||||||||||||||||||  |||| ||| ||||||||||    
T  51421999 ggcgggtaaccacggatatggattttattgccatgcctact 51422039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 36187275 - 36187128
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||| |||||||||||| ||||||| |||    
T  36187275 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgccaaattgagtt 36187176  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||||||||||||||||| |||| |||| ||||||||| ||||||||||    
T  36187175 tggttcgggcgggtaacgacgggtatgggttttgttgccatgcctact 36187128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 24236816 - 24236671
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||| |||||||||| | |||||  ||||||| ||| |||||||||||||||| |||    
T  24236816 tatacccgttccccgttccatacccgtgttttgagatcggggaaaacccatacccatacctaaacccagtcaaaacgggaaaaacccgtcaaattgagtt 24236717  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||    
T  24236716 tggttcgggcgggtaaccatgggtatgagttttgttgccatgccta 24236671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 49250820 - 49250683
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| || |||||||||||||||||  ||||||||||    
T  49250820 ttacccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgaatttggttcgg 49250721  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||| ||||||||| ||||| |||||||||||||||||    
T  49250720 gcggataaccacgggtatgaattttgttgtcatgccta 49250683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 29936450 - 29936601
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatat------ccaaacctggtcaaaatggggaaaacccgtcaaat 105  Q
    ||||| ||||||| || |||||||||| ||||||||||||||||||| ||||||||||       |||||| | ||||||| ||||||||||||||||||    
T  29936450 tatacccgttacccgtcccatacccgtattttgagatcggggaaaacccatacccatactcatacccaaacttagtcaaaacggggaaaacccgtcaaat 29936549  T
Q  106 tgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  29936550 tgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcatgccta 29936601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 24710881 - 24711028
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||| ||||||||||||||||||||  ||    
T  24710881 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatactcatatccaaacccagtcaaaacggggaaaacccgtcaaattgaatt 24710980  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||||||||| || ||| ||||| | || ||||||||||||||||||||    
T  24710981 tggttcgggtggataatcacgggtgtgggttttgttgtcatgcctact 24711028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 19572567 - 19572425
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||| |||||| ||||| |||||||||| |||||||  ||||||||||||||||||||||||||| ||||    
T  19572567 tatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattaggtt 19572468  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    ||||||||||||||||||||   |||| ||||||||| |||||    
T  19572467 tggttcgggcgggtaaccacaagtatgggttttgttgccatgc 19572425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 5181073 - 5181218
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||| |||||| |||||||||||| |||||||||| | |||||  ||||||||||||||||||||||||||||  ||    
T  5181073 tatacccgttacccgtcccatacccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaaatggggaaaacccgtcaaattgaatt 5181172  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  5181173 tggttcgggcgggtaaccgcgggtatgggttttgttgccatgccta 5181218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 23968621 - 23968758
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| || ||||||||||||||||| | |||||||||| |||||||||| |||||||   ||||||||||||||| |||||||||||||||||||||||    
T  23968621 ttacccgtcccatacccgtgttttgaaaccggggaaaacccatacccatacccaaacccaatcaaaatggggaaaatccgtcaaattgggtttggttcgg 23968720  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||| ||| |||| ||||||||| ||||||||    
T  23968721 gcgggtaaccgcgggtatgggttttgttgccatgccta 23968758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 34673337 - 34673192
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||||||  |||||||||||||||| || ||| ||||| || ||||||| |||||||  || ||||||||||||| |||| ||||||||||    
T  34673337 tatacccgttaccagtctcatacccgtgttttgaaattgggaaaaacccaaacccatacccaaacccagttaaaatggggaaaatccgttaaattgggtt 34673238  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||    
T  34673237 tggttcgggcgggtaatcactggtatgagttttgttgtcatgccta 34673192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 17134981 - 17135126
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| ||  |||||||||||||||| |||||||||||| |||||||| | |||||||  |||||||  | ||||| |||||||||||||||    
T  17134981 tatacccgttacccgtctcatacccgtgttttgaaatcggggaaaacccatacccacacccaaacccagtcaaaacagagaaaatccgtcaaattgggtt 17135080  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  17135081 tggttcgggcgggtaaccgcgggtatgggttttgttgccatgccta 17135126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 23490826 - 23490681
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||||||||| |||||||||| |||||||  |||||||  || ||||||||||||||||| ||    
T  23490826 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacaggaaaaacccgtcaaattggatt 23490727  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||| | |  |||| ||||||||| ||||||||    
T  23490726 tggttcgggcgggtaactatgagtatgggttttgttgccatgccta 23490681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 34611107 - 34611251
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||  || |||||||||||||||||||||||| ||||| |||||||||| |||||     |||||| ||||||||||||||||||||| ||    
T  34611107 tatacacgttacatgtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaattcaatcaaaacggggaaaacccgtcaaattggatt 34611206  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcct 156  Q
    |||||| ||||||||||||||| ||||  ||||||||||||||||    
T  34611207 tggttcaggcgggtaaccacgggtatggattttgttgtcatgcct 34611251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 39616326 - 39616472
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    |||||| |||||| || | ||||||||||||||| || ||||||||| ||||| |||| ||||||   ||||||| ||||||||| |||||||||| |||    
T  39616326 tatacttgttacccgtcctatacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaacggggaaaactcgtcaaattgagtt 39616425  T
Q  112 tggttcgggcgggtaaccac-ggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||| | || |||||||||||||||||||||||    
T  39616426 tggttcgggcgggtaaccgcggggtatgagttttgttgtcatgccta 39616472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 45866240 - 45866096
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||||| ||||| ||  |||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||| || ||||||||||||| || ||||    
T  45866240 tatactcattacctgtctcatacccgtgttttgaaatcggggaaaacccatacccatacccaaacctagtcaaaa-ggagaaaacccgtcaatttaggtt 45866142  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||| |||||||||||||| ||  |||| ||||||||| ||||||||    
T  45866141 tggctcgggcgggtaaccgcgagtatgggttttgttgccatgccta 45866096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 13390456 - 13390574
Alignment:
Q  37 gtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggata 136  Q
    ||||||||| ||||||||||| ||||||||||| |||||||  ||||||| ||||||| ||||||||||||||||||||||||||||||||||  || ||    
T  13390456 gtgttttgaaatcggggaaaattcatacccatacccaaacccagtcaaaacggggaaa-cccgtcaaattgggtttggttcgggcgggtaaccgtgggta 13390554  T
Q  137 tgagttttgttgtcatgcct 156  Q
    || ||||||||| |||||||    
T  13390555 tgggttttgttgccatgcct 13390574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 16408983 - 16409120
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||||||||||||||| || ||||||||| |||||||||| |||||||  ||||||| |||||||||||||||||||||||||| ||||    
T  16408983 gttacccgtcccatacccgtgttttgaaattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttgattcg 16409082  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
     | ||||||||  |  |||| ||||||||||||||||||    
T  16409083 ag-gggtaaccgtgtgtatgggttttgttgtcatgccta 16409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 18354135 - 18353990
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||| |||||||| |||||||||||| ||||||||||| |||| |  ||||||| ||| ||||||||||||||||  ||    
T  18354135 tatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccatacccatattcaaatccagtcaaaacgggaaaaacccgtcaaattgaatt 18354036  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||| | ||| || | ||||||||| ||||||||    
T  18354035 tggttcgggcgggtaatcgcgggtacgggttttgttgccatgccta 18353990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 28297968 - 28298127
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctgg------------tcaaaatggggaaaacccg 99  Q
    ||||| ||||||| || |||||||||||||| |||||||||||||||||||||||||| ||| |||               ||||||  |||||||||||    
T  28297968 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccatacccatacccaaatccaatcaaaacagggaaaacccg 28298067  T
Q  100 tcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  28298068 tcaaattggatttggttcgggtgggtaaccacggatatgagttttgttgacatgcctact 28298127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 9982945 - 9982800
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    |||||||||||||  | |||| |||||||||||| || |||||||| ||| || |||| |||||||  ||||||| || ||||| || ||||||||| ||    
T  9982945 tatactcgttacccatcccattcccgtgttttgaaattggggaaaattcaaactcatacccaaacccagtcaaaacggagaaaatccatcaaattggatt 9982846  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||| | |||||||||| |||||||||||||| ||||||||    
T  9982845 tggttcgggagagtaaccacgggtatgagttttgttgccatgccta 9982800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 40087501 - 40087374
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    ||||||| ||||||||| ||||||||||||||||||||||| ||||||   ||||||| |||||||| |||||||||||  |||||||| | ||| ||||    
T  40087501 ccatacctgtgttttga-atcggggaaaactcatacccatacccaaactcagtcaaaacggggaaaatccgtcaaattgaatttggttcagacggataac 40087403  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    | ||| |||||||||||||| ||||||||    
T  40087402 cgcgggtatgagttttgttgccatgccta 40087374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 13020646 - 13020772
Alignment:
Q  31 atacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacca 130  Q
    |||| |||||||||| |||||||||||| |||||||||| |||||||  ||||| | || |||||||||||| |||| ||||||||||| | |||||||     
T  13020646 atactcgtgttttgaaatcggggaaaacccatacccataaccaaacccagtcaagacggagaaaacccgtcagattgagtttggttcggacaggtaaccg 13020745  T
Q  131 cggatatgagttttgttgtcatgccta 157  Q
    | |||||  ||||||||||||||||||    
T  13020746 cagatataggttttgttgtcatgccta 13020772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 20774651 - 20774745
Alignment:
Q  63 acccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| |||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||||    
T  20774651 acccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttggttcgggcgggtaaccacgagtatgggttttgttgccatgccta 20774745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 29871333 - 29871191
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || |||||||| |||||||| ||||| |||||| || || |||| |||||| | ||||||| | |||||||||||||||||| |||||| |||    
T  29871333 gttacctgtcccatacccatgttttgaaatcggagaaaacccaaactcatacccaaacttagtcaaaacgaggaaaacccgtcaaattgagtttgg-tcg 29871235  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgcctacttat 162  Q
    |  || ||||||||  ||||||||||||||||||||| ||||||    
T  29871234 gatggataaccacgagtatgagttttgttgtcatgccaacttat 29871191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 12495044 - 12495190
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||  || ||||| ||||||||||| |||||| |||||  | ||||||| | |||||  |||||| ||||||||| |||||||||||| ||    
T  12495044 tatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaaccaaaacccataccgaaacccagtcaaagtggggaaaatccgtcaaattggatt 12495143  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||| || ||||||||||   ||||| ||||||||||||||||||    
T  12495144 tggttcaggtgggtaaccacatgtatgaattttgttgtcatgcctac 12495190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 44615523 - 44615389
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||||||||||||| | ||| |||||||| || || |||| |||||||  ||||||| ||| |||||||||||||||| |||||||  |    
T  44615523 gttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggtctg 44615424  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatg 153  Q
    || |||||||||||| |||| ||||||||| ||||    
T  44615423 ggtgggtaaccacgggtatgggttttgttgccatg 44615389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 44793046 - 44793180
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||||||||||||| | ||| |||||||| || || |||| |||||||  ||||||| ||| |||||||||||||||| |||||||  |    
T  44793046 gttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggtctg 44793145  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatg 153  Q
    || |||||||||||| |||| ||||||||| ||||    
T  44793146 ggtgggtaaccacgggtatgggttttgttgccatg 44793180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 42439725 - 42439581
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||  || |||||||| ||||||||||||||  |||| ||||||||||| ||||||   ||||||||||  ||||   ||||||||| |||    
T  42439725 tatacccgttactcgtcccatacccatgttttgagatcggaaaaaattcatacccatacccaaactcagtcaaaatggaaaaaatttgtcaaattgagtt 42439626  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcct 156  Q
    |||||||||||| |||||||| |||||  |||||||| |||||||    
T  42439625 tggttcgggcggataaccacgaatatggattttgttgccatgcct 42439581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 42707886 - 42707747
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    ||||||| || ||||||||||||||||| ||||| |||||||||||| |||| |||||||  ||||||||||| |||| ||||||||||   ||| |||     
T  42707886 cgttacccgtcccatacccgtgttttgaaatcggagaaaactcatactcatacccaaacccagtcaaaatgggaaaaatccgtcaaattaaatttagttt 42707787  T
Q  118 gggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    || ||| ||||||||  |||| ||||||||| ||| ||||    
T  42707786 ggacggataaccacgattatgggttttgttgccataccta 42707747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 3628039 - 3627907
Alignment:
Q  13 atactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggttt 112  Q
    |||| ||||||| || ||||||||||||||||| ||||||||||||  |||||||            ||||||| ||| ||||| | |||||||| ||||    
T  3628039 atacccgttacccgtcccatacccgtgttttgaaatcggggaaaacctataccca------------gtcaaaacgggaaaaactcatcaaattgagttt 3627952  T
Q  113 ggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||    
T  3627951 ggttcgggcgggtaaccgcgtgtatgagttttgttgtcatgccta 3627907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 16433165 - 16433087
Alignment:
Q  81 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||  ||||| ||| ||||||||||    
T  16433165 tcaaaatggggaaaatccgtcaaattgagtttggttcggatgggtaaccacggatataggttttattgccatgcctact 16433087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 48576155 - 48576059
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactc------atacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcggg 120  Q
    |||||| |||||||||||| |||||||||||      ||||||||| |||||||| ||||||||||||||||||| |||| |||| |||||||||||    
T  48576155 catacctgtgttttgagattggggaaaactctaacccatacccatacccaaacctagtcaaaatggggaaaacccatcaatttggatttggttcggg 48576059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 19003704 - 19003576
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||| |||||  |||||||||||| |  ||||||| |||||||| ||||||  |||||||||||||||||| ||| ||| || ||||||||| |    
T  19003704 ccatacccgtattttgtaatcggggaaaacccgaacccatacccaaacctagtcaaatcggggaaaacccgtcaaatcggggttgctttgggcgggtacc 19003605  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    || ||  | | ||||||||| ||||||||    
T  19003604 catgggcacgggttttgttgccatgccta 19003576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 38106307 - 38106384
Alignment:
Q  80 gtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||| || |||||||| |||||||||||  ||||||||| |  |||||||||||||| ||||||||    
T  38106307 gtcaaaatggggaaaatccatcaaattgtgtttggttcggatgggtaaccatgagtatgagttttgttgccatgccta 38106384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 13798290 - 13798377
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttc 117  Q
    |||||||||||||||| |||||| ||||| || || |||| |||||||  |||| |  ||||||||||||| ||||||||||||||||    
T  13798290 catacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgttaaattgggtttggttc 13798377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 35936884 - 35936749
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||| | || |||||| |||| ||||| |||||||||||| || || |||| |||||||  ||||||||| | ||||||||||| ||||  ||    
T  35936884 tatacccgttatccgtcccatactcgtgatttgaaatcggggaaaacccaaactcatacccaaaccaagtcaaaatgagaaaaacccgtcagattgaatt 35936785  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgtt 147  Q
    |||||||| | |||||| |||| ||||  |||||||    
T  35936784 tggttcggacaggtaactacgggtatggattttgtt 35936749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 156
Target Start/End: Complemental strand, 34059157 - 34059059
Alignment:
Q  58 ctcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcct 156  Q
    |||||||||||| ||||| || ||||||| ||| | ||||||||||||||  |||||||||| ||| |||||  || |||| ||||||||| |||||||    
T  34059157 ctcatacccatacccaaatctagtcaaaacgggaataacccgtcaaattgaatttggttcggacggataaccgtgggtatgggttttgttgccatgcct 34059059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 10450064 - 10450018
Alignment:
Q  80 gtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggta 126  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||    
T  10450064 gtcaaattggggaaaacccgtcaaattggggttggtttgggcgggta 10450018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 49741013 - 49740935
Alignment:
Q  80 gtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    ||||||| |||||||| ||||||||||| |||||||||  | || ||||||||| ||||  |||||||| |||||||||    
T  49741013 gtcaaaaaggggaaaatccgtcaaattgagtttggttcaagtggataaccacgggtatggattttgttgccatgcctac 49740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 50426651 - 50426565
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||  ||||||| || ||||||| || ||||||||||||||||| || ||||||| ||| ||||  |||||||| ||||||||    
T  50426651 ccaaacccagtcaaaacggagaaaacctgttaaattgggtttggttcgagccggtaaccgcgggtatggattttgttgccatgccta 50426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 2514811 - 2514912
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatcc-aaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacca 130  Q
    |||||||||||||| || ||||||||| || || |||| || |||||   |||||| ||||||||||| |||| |||||||||||| || |||||| |||    
T  2514811 tacccgtgttttgaaattggggaaaacccaaactcataccccaaacccaatcaaaacggggaaaacccatcaagttgggtttggtttggacgggtaccca 2514910  T
Q  131 cg 132  Q
    ||    
T  2514911 cg 2514912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 10778616 - 10778527
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattg 107  Q
    ||||||| || ||||||||||||||||| |||||| |||||| | || |||| |||||||  ||||||  ||  ||||||||||||||||    
T  10778616 cgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaagcggaaaaaacccgtcaaattg 10778527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 23719657 - 23719717
Alignment:
Q  88 ggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttg 148  Q
    ||||||||||||||||||||  |||||||  | |||||| |||| ||||||||||||||||    
T  23719657 ggggaaaacccgtcaaattgaatttggtttcgtcgggtacccactgatatgagttttgttg 23719717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 5283572 - 5283515
Alignment:
Q  100 tcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||| |||||||||| ||||  ||||| |||||  |||||||||||||||||||||||    
T  5283572 tcaatttgggtttggctcggatgggtacccacgagtatgagttttgttgtcatgccta 5283515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 16433216 - 16433167
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcataccca 67  Q
    ||||||| || ||||||||||||||||| ||||| ||||||||| |||||    
T  16433216 cgttacccgtcccatacccgtgttttgaaatcggagaaaactcaaaccca 16433167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 34060062 - 34060025
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcataccca 67  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  34060062 catacccgtgttttgaaatcgaggaaaactcataccca 34060025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 17092014 - 17091950
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaac 76  Q
    ||||| ||||||  || ||||||| ||||| | | |||||||||||||||||| |||||||||||    
T  17092014 tatacccgttacgcgtcccatacctgtgttataaaatcggggaaaactcatactcatatccaaac 17091950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 35594323 - 35594383
Alignment:
Q  184 tggtccttttatccaattttaactaggtcaacgcttgaatggcatgccacatatgtaatta 244  Q
    ||||||||||| |||||||| ||| |||||||||||   ||||||||||| | ||||||||    
T  35594323 tggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtgtaatta 35594383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 31918597 - 31918469
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||||||| ||||||||||||||| ||||| |||| |||||||  ||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  31918597 ccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaac 31918498  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    |||||||||| ||||||||| ||||||||    
T  31918497 cacggatatgggttttgttgccatgccta 31918469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 43893267 - 43893413
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||||||| | |||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  43893267 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaacc-catacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtt 43893365  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||| |||||||||||||||||| |||| ||||||||| ||||||||||    
T  43893366 tggctcgggcgggtaaccacgggtatgggttttgttgccatgcctact 43893413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 6382328 - 6382183
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||||||||| |||||| |||||||||| |||||||  ||||||  ||||||||||||||||||||||||    
T  6382328 tatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccatacccatacccaaacccagtcaaagcggggaaaacccgtcaaattgggtt 6382229  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    || ||||||||||||||||||| |||| ||||| ||| ||||||||    
T  6382228 tgattcgggcgggtaaccacgggtatgggttttattgccatgccta 6382183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 11028112 - 11028257
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||| ||||| |  ||||||| || |||||||||||||||||||||    
T  11028112 tatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaatccagtcaaaacggagaaaacccgtcaaattgggtt 11028211  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||| |||||||||||  |||| ||||||||| ||||||||    
T  11028212 tggttcgggtgggtaaccacgtgtatgggttttgttgccatgccta 11028257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 37349171 - 37349296
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    |||||||||||||| ||||||||||||||| || |||| |||||||  ||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  37349171 tacccgtgttttgaaatcggggaaaactcaaactcatacccaaacccagtcaaaacggggaaaacctgtcaaattgggtttggttcgggcgggtaaccac 37349270  T
Q  132 ggatatgagttttgttgtcatgccta 157  Q
    || |||| ||||||||| ||||||||    
T  37349271 gggtatgggttttgttgccatgccta 37349296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 44317574 - 44317719
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||||||||| |||||||||| |||||||  ||||||| |||||||| |||||||||||||||    
T  44317574 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggtt 44317673  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    || |||||||| |||||||||| |||| ||||||||| | ||||||    
T  44317674 tgattcgggcgagtaaccacgggtatgggttttgttgccttgccta 44317719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 31752495 - 31752642
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||||||||||  ||  |||||||||||||||| |||||||||||| ||||||||||||||||||   |||||| ||  ||||||||||||||||| ||    
T  31752495 tatactcgttactcgtctcatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggtaaaaacccgtcaaattggatt 31752594  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    || ||||||||||||||| ||| |||| ||||||||||||||||||||    
T  31752595 tgattcgggcgggtaaccgcgggtatgggttttgttgtcatgcctact 31752642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 47550402 - 47550263
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||| ||| ||||||| ||||||||||    
T  47550402 gttacccgtcccatacccgtgttttgagatcggggaaaactcatacctatacccaaacccagtcaaaatggggaaaatccgccaaattgagtttggttcg 47550303  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||||||||||   |||| ||||||||  |||||||||    
T  47550302 ggcgggtaaccacatgtatgggttttgtttccatgcctac 47550263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 21423900 - 21424046
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| ||  ||||||||||||| ||||| ||||||||| |||||||||| |||||||  ||||||| ||| |||| |||||||||||| ||    
T  21423900 tatacccgttacccgtctcatacccgtgtttcgagattggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaatccgtcaaattggatt 21423999  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||    
T  21424000 tggttcgggcgggtaaccacgggtatgagttttattgccatgcctac 21424046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 7609009 - 7609150
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||||||||| |||||||||| ||||| |  ||||||| ||||||||||||||||||||||||    
T  7609009 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaatccagtcaaaacggggaaaacccgtcaaattgggtt 7609108  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatg 153  Q
    | ||||||| |||||||||||  |||| ||||||||| ||||    
T  7609109 tagttcgggtgggtaaccacgagtatgggttttgttgccatg 7609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 11122925 - 11122780
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| |||||||| |||||| |||||||||| ||||||   ||||||| ||  |||| ||||||||||| |||    
T  11122925 tatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacccatacccatacccaaactcagtcaaaacggaaaaaatccgtcaaattgagtt 11122826  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||    
T  11122825 tggttcgggcgggtaaccacgggtatgagttttgttgccatgccta 11122780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 55826679 - 55826534
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||| |||||| ||||||||||||||| ||||| ||||||||||||  |||||||  ||||||| |||||||||||| ||    
T  55826679 tatacccgttacccgtcccatacctgtgtttcgagatcggggaaaacccatactcatatccaaacccagtcaaaacagggaaaatccgtcaaattggatt 55826580  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||| ||||||||||||| |||| ||||||||| ||||||||    
T  55826579 tggttcggacgggtaaccacgggtatgggttttgttgccatgccta 55826534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 15987318 - 15987172
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| |||||||  | ||||||||||||||| | ||| ||||||||||||||||||| |||||||   ||||||||| |||||||||||||||||||||    
T  15987318 tatacccgttacccatcccatacccgtgttttaaaatctgggaaaactcatacccatacccaaacccaatcaaaatggagaaaacccgtcaaattgggtt 15987219  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    ||||||||| |||||||| || || || ||||||||| |||||||||    
T  15987218 tggttcgggtgggtaaccgcgaatgtgggttttgttgccatgcctac 15987172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 5902670 - 5902530
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || |||||||||||||| ||||||||||||||| |||||||| | |||      ||||||| |||||||||||||||||||| |||    
T  5902670 tatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccaaaccca------gtcaaaacggggaaaacccgtcaaattgagtt 5902577  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||||||||||||||||||| |||  ||||||||| |||||||||    
T  5902576 tggttcgggcgggtaaccacgggtataggttttgttgccatgcctac 5902530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 26564870 - 26565015
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||| ||||||| |||||||||| |||| || |||| |||||||  ||||||| |  ||||| |||||||||||| ||    
T  26564870 tatacccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaacccagtcaaaacgaagaaaatccgtcaaattggatt 26564969  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||||| |||||||||||| |||| ||||||||| ||||||||    
T  26564970 tggttcgggtgggtaaccacgggtatgggttttgttgccatgccta 26565015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 32585528 - 32585664
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || ||||||||||||||||| ||||| ||||| ||||||||| | |||      ||||||| |||||||||| |||||||||||||    
T  32585528 tatacccgttacctgtcccatacccgtgttttgaaatcggagaaaattcatacccaaaccca------gtcaaaaaggggaaaaccggtcaaattgggtt 32585621  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    ||||| |||||| ||||| ||| |||||||||||||| |||||    
T  32585622 tggtttgggcggataaccgcgggtatgagttttgttgccatgc 32585664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 48459527 - 48459665
Alignment:
Q  19 gttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||| ||||||||||| |||||||| |||||||||||| |||| |||||  |||| |   |||||||||| ||||||| ||||||| |||||| ||||    
T  48459527 gttacccgttccatacccatgttttgaaatcggggaaaacccatatccatactcaaatccaatcaaaatgggaaaaacccatcaaatttggtttgattcg 48459626  T
Q  119 ggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    | ||||||||| ||||||||  |||||||| ||||||||    
T  48459627 gacgggtaaccgcggatatggattttgttgccatgccta 48459665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 1724308 - 1724181
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||| |||||||| |||||| ||||| || ||||||| |||||||  ||||||  ||||||||| |||||||||| |||||||||||| ||||||     
T  1724308 ccatacccatgttttgaaatcgggaaaaacccaaacccatacccaaacccagtcaaac-ggggaaaacacgtcaaattgagtttggttcgggtgggtaaa 1724210  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    ||||| |||||||||||||  ||||||||    
T  1724209 cacgggtatgagttttgttaccatgccta 1724181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 39375317 - 39375466
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||| || | |||||||| |||||| |||||||||||  || || |||||||||||   |||||||| || ||||||||||||||||  ||    
T  39375317 tatacccgttacccgtcctatacccgtattttgaaatcggggaaaagccaaactcatatccaaactcagtcaaaataggaaaaacccgtcaaattgaatt 39375416  T
Q  112 tggttcgggcgggtaacc----acggatatgagttttgttgtcatgccta 157  Q
    ||||||||||||||||||    || ||||||||||| |||| ||||||||    
T  39375417 tggttcgggcgggtaaccacagacagatatgagtttggttgccatgccta 39375466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 19548973 - 19548848
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    |||| ||||||||| |||||||||||| | || ||||| |||||||  ||||||  |||||||||| ||||||||||||||||||||||  |||| |||     
T  19548973 tacctgtgttttgaaatcggggaaaacccttatccatacccaaacccagtcaaagaggggaaaacc-gtcaaattgggtttggttcgggtaggtacccat 19548875  T
Q  132 ggatatgagttttgttgtcatgcctac 158  Q
     | ||||||||||||||||||| ||||    
T  19548874 aggtatgagttttgttgtcatgtctac 19548848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 39046991 - 39047136
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtt 111  Q
    ||||| ||||||  || |||||||||||||| || || ||||||||| ||||||||||  ||||    ||||||| || |||||||| ||||||||||||    
T  39046991 tatacccgttacatgtcccatacccgtgtttggaaattggggaaaacccatacccatactcaaattcagtcaaaacggagaaaacccatcaaattgggtt 39047090  T
Q  112 tggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    || ||||| |||||||||  ||||||  ||||||||| ||||||||    
T  39047091 tgattcggacgggtaaccgtggatataggttttgttgccatgccta 39047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 159
Target Start/End: Original strand, 42299850 - 42299974
Alignment:
Q  35 ccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgga 134  Q
    ||||||||||| |||||||||||  |||||||||| | ||||   ||||||  ||  |||||||||||||||| |||||||||||  |||||||| |  |    
T  42299850 ccgtgttttgaaatcggggaaaatccatacccatacctaaactcagtcaaaccggaaaaaacccgtcaaattgagtttggttcggatgggtaaccgcata 42299949  T
Q  135 tatgagttttgttgtcatgcctact 159  Q
    ||||| |||||||||||||||||||    
T  42299950 tatgaattttgttgtcatgcctact 42299974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 7985164 - 7985031
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||| |||||||| ||||| |||||  || ||  ||| |||||||   ||||||   |||||||||||||||||||||||||||| ||||| ||||    
T  7985164 ccatacccatgttttgaaatcggagaaaatccaaacttatacccaaacccaatcaaaaccaggaaaacccgtcaaattgggtttggttcaggcggataac 7985065  T
Q  129 cacggatatgagttttgttgtcatgcctacttatg 163  Q
    |||  ||||||||||||||| |||||||| |||||    
T  7985064 cac-aatatgagttttgttgacatgcctaattatg 7985031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 53906335 - 53906249
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||  ||||||| ||| |||||||||||||||||||||||||||||||| |||||  || |||| ||||||||| ||||||||    
T  53906335 ccaaacccagtcaaaacgggaaaaacccgtcaaattgggtttggttcgggcggataaccgtgggtatgggttttgttgccatgccta 53906249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 19883089 - 19882967
Alignment:
Q  35 ccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgga 134  Q
    ||||||||| | |||||||||||| || || ||||  ||||||   |||||  ||| |||||||||||||||||||||||||||||||||||  | ||      
T  19883089 ccgtgttttaaaatcggggaaaacccaaactcatactcaaacccaatcaaagcgggaaaaacccgtcaaattgggtttggttcgggcgggtattcgcgag 19882990  T
Q  135 tatgagttttgttgtcatgccta 157  Q
    |||| ||||||||| ||||||||    
T  19882989 tatgggttttgttgccatgccta 19882967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 6482074 - 6481950
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    ||||||||||||||| | || ||||||||| || ||||||| |||||||   ||||||  | ||||| ||||||||||| ||||| |||||| || ||||    
T  6482074 ccatacccgtgtttttaaattggggaaaacccaaacccatacccaaacccaatcaaaacagagaaaatccgtcaaattgagtttgattcgggtggataac 6481975  T
Q  129 cacggatatgagttttgttgtcatg 153  Q
    ||||| |||  ||||||||| ||||    
T  6481974 cacgggtataggttttgttgccatg 6481950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 44887669 - 44887725
Alignment:
Q  98 cgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    |||||||||||||||||||||||||| |||||  || ||||||||||||||||||||    
T  44887669 cgtcaaattgggtttggttcgggcggataaccgtgggtatgagttttgttgtcatgc 44887725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 155
Target Start/End: Complemental strand, 15733562 - 15733439
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    ||||||| |||||| |||| |||||||||||| ||||| ||||||||  | |||  ||||||||||  |||||| ||| |||||| ||||||||| |||     
T  15733562 tacccgtattttgaaatcgaggaaaactcatatccatacccaaacctaataaaatcggggaaaacctatcaaatcggggttggtttgggcgggtatccat 15733463  T
Q  132 ggatatgagttttgttgtcatgcc 155  Q
    ||  | |||||||||||| |||||    
T  15733462 gggcacgagttttgttgttatgcc 15733439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 7334230 - 7334108
Alignment:
Q  35 ccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgga 134  Q
    ||||||||||| |||||||||||  || | ||||| |||||||  ||||||  ||| ||||||||||||||| |||||||||| ||||| || || |       
T  7334230 ccgtgttttgaaatcggggaaaatccaaatccatacccaaacccagtcaaagcgggaaaaacccgtcaaattaggtttggttcaggcggatacccgcaag 7334131  T
Q  135 tatgagttttgttgtcatgccta 157  Q
    |||| ||||||||| ||||||||    
T  7334130 tatgggttttgttgccatgccta 7334108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 39188621 - 39188687
Alignment:
Q  92 aaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    ||||||| ||||||||||||| |||||| |  |||||||||  ||||||||||||||||||||||||    
T  39188621 aaaacccatcaaattgggtttagttcggacaagtaaccacgtgtatgagttttgttgtcatgcctac 39188687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 425855 - 425943
Alignment:
Q  65 ccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    |||||||||||||  ||||||| ||| |||||||  |||||| |||| ||||||| ||| ||||||||  ||||||||||||||||||||    
T  425855 ccatatccaaacccagtcaaaacgggaaaaacccc-caaattaggttaggttcggacggataaccacgagtatgagttttgttgtcatgc 425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 3909089 - 3909012
Alignment:
Q  81 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    ||||||||||||||| || |||||| ||| | ||||||||| |||||||  || |||||||||||||| |||||||||    
T  3909089 tcaaaatggggaaaatccatcaaatcggggtgggttcgggcaggtaaccgtgggtatgagttttgttgccatgcctac 3909012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 157
Target Start/End: Original strand, 36919198 - 36919307
Alignment:
Q  48 tcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgtt 147  Q
    |||||||||||||| || |||| |||||||  || |||  | | |||||||||||||||| |||||||||||  | ||| || ||  |||||||||||||    
T  36919198 tcggggaaaactcaaactcatacccaaacccagttaaagcgagaaaaacccgtcaaattgagtttggttcggatgcgtacccgcgagtatgagttttgtt 36919297  T
Q  148 gtcatgccta 157  Q
    ||||||||||    
T  36919298 gtcatgccta 36919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 30673077 - 30673147
Alignment:
Q  89 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    ||||||||||||||||||| | |||||| || ||| || ||| ||| ||| ||||||||||||||||||||    
T  30673077 gggaaaacccgtcaaattgtggttggtttggacggatacccatggacatgggttttgttgtcatgcctact 30673147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 37107450 - 37107543
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaatt 106  Q
    ||||| ||||||| || ||||||||||||||||| || ||| ||||| || || ||||  ||||||  ||||||||||| |||||||||||||||    
T  37107450 tatacccgttacccgtcccatacccgtgttttgaaattggg-aaaacccaaactcatacacaaacccagtcaaaatgggaaaaacccgtcaaatt 37107543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 41915024 - 41914906
Alignment:
Q  40 ttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatga 139  Q
    |||||| |||||||||||| || || |||| || ||||  ||||||  |||||||| || |||||| ||| |||||| |||||| || ||| ||  |||     
T  41915024 ttttgaaatcggggaaaacccaaactcatacccgaacccagtcaaatcggggaaaatccatcaaatcggggttggtttgggcggttacccatgggcatgg 41914925  T
Q  140 gttttgttgtcatgcctac 158  Q
    |||||||||||||||||||    
T  41914924 gttttgttgtcatgcctac 41914906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 13768430 - 13768365
Alignment:
Q  90 ggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcc 155  Q
    |||||||||||||||||| ||||| |||||| ||||||||| || |||  ||||||||| ||||||    
T  13768430 ggaaaacccgtcaaattgagtttgattcgggtgggtaaccatgggtatcggttttgttgccatgcc 13768365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 39086217 - 39086305
Alignment:
Q  33 acccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggc 121  Q
    |||| |||| ||| ||||| ||||||||| || ||||||||||||   |||||| || ||||| ||||||||||| |||||||| ||||    
T  39086217 acccatgttgtgaaatcggagaaaactcaaactcatatccaaacccaatcaaaacggagaaaatccgtcaaattgagtttggtttgggc 39086305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 9929204 - 9929118
Alignment:
Q  31 atacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcg 118  Q
    |||||||| |||||| ||| || |||||||||||||||| ||||| || ||| ||| ||||||| || |||||| ||| |||||||||    
T  9929204 atacccgtattttgaaatcaggaaaaactcatacccatacccaaatctagtc-aaagggggaaatccagtcaaaatggatttggttcg 9929118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 21956799 - 21956728
Alignment:
Q  83 aaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgc 154  Q
    |||||||| |||||| |||||||| | ||||||||||||||||| ||   | |||| |||||||||||||||    
T  21956799 aaaatgggaaaaacctgtcaaatttgatttggttcgggcgggtacccgttggtatgggttttgttgtcatgc 21956728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 19534567 - 19534633
Alignment:
Q  91 gaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||||||| ||||||| || | ||||| |||||||||  ||||| ||| ||||||||    
T  19534567 gaaaacccgtcaaattggatttggtttggacaggtaatcacggatattggtttttttgccatgccta 19534633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 25298842 - 25298756
Alignment:
Q  71 ccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||  |||||| |||| |||| |||||||||||  ||||| ||||||||||| ||  |  |||||||||||||||||| ||||    
T  25298842 ccaaacccagtcaaagtgggaaaaatccgtcaaattgaatttgggtcgggcgggtatccgtgagtatgagttttgttgtcataccta 25298756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 32596240 - 32596194
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaac 58  Q
    ||||| ||||||| || ||||||||||||||||| ||||||||||||    
T  32596240 tatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 32596194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 33615298 - 33615236
Alignment:
Q  99 gtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctactta 161  Q
    ||||||| |||||||||||||  ||||| || |||||||| |||| |||||||||||| ||||    
T  33615298 gtcaaatcgggtttggttcggatgggtacccgcggatatgggtttagttgtcatgcctcctta 33615236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 43309528 - 43309614
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaa 104  Q
    ||||||| || ||||||||||||||||| |||||| ||||| || || ||||  ||||||  ||||||  || ||||||||||||||    
T  43309528 cgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaagcggagaaaacccgtcaaa 43309614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 12075667 - 12075543
Alignment:
Q  32 tacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccac 131  Q
    |||||||||||||| || ||  |||||||| || |||| ||||||| | |||||  ||  |||||||||||||||| |||||  |||| | |||| ||||    
T  12075667 tacccgtgttttgaaattggaaaaaactcaaactcatacccaaacccgatcaaagcgga-aaaacccgtcaaattgagtttgaatcggacaggtacccac 12075569  T
Q  132 ggatatgagttttgttgtcatgccta 157  Q
      ||||| ||||| ||||||||||||    
T  12075568 atatatgggttttattgtcatgccta 12075543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 23927630 - 23927566
Alignment:
Q  92 aaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| ||||||| ||||||||| |||||| || || ||  |||||||||||||||||||||||    
T  23927630 aaaacccatcaaattaggtttggtttgggcggata-ccgcgtgtatgagttttgttgtcatgccta 23927566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 50375896 - 50375832
Alignment:
Q  92 aaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||| ||||| ||||| ||||||||||||||| || || ||| |||| ||||||||||||||||||    
T  50375896 aaaatccgtcgaattgagtttggttcgggcggttacccgcggttatg-gttttgttgtcatgccta 50375832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 1835095 - 1835035
Alignment:
Q  184 tggtccttttatccaattttaactaggtcaacgcttgaatggcatgccacatatgtaatta 244  Q
    ||||||||||| |||||||| ||| |||||||||||   ||||||||||| | ||||||||    
T  1835095 tggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtgtaatta 1835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 4741255 - 4741132
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||| |||||| | |||| |||||||||| || |||||||||||   ||| ||| |||||||||  ||||| ||  ||||||||||| ||| || |    
T  4741255 ccatacccatgttttaaaatcgaggaaaactcaaactcatatccaaactcagtc-aaacggggaaaacttgtcaatttatgtttggttcggacggatacc 4741157  T
Q  129 cacggatatgagttttgttgtcatg 153  Q
    | |   |||||||||||||||||||    
T  4741156 cgcatgtatgagttttgttgtcatg 4741132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 12825511 - 12825471
Alignment:
Q  18 cgttaccagttccatacccgtgttttgagatcggggaaaac 58  Q
    ||||||| || ||||||||||||||||| ||||||||||||    
T  12825511 cgttacccgtcccatacccgtgttttgaaatcggggaaaac 12825471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 52490547 - 52490631
Alignment:
Q  158 cttatgtttttgctgctttgcaattgtggtccttttatccaattttaactaggtcaacgcttgaatggcatgccacatatgtaat 242  Q
    |||||||||| ||  ||||| ||| || ||| |||| ||||||||| ||| || ||||||||  |||||||||||||| ||||||    
T  52490547 cttatgttttagcccctttgtaatagtagtcattttttccaattttgacttggccaacgcttacatggcatgccacatgtgtaat 52490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 274 - 401
Alignment:
Q  29 ccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaac 128  Q
    |||||||||||||||||||| | |||||||| ||||||||| ||||||   ||||||| || ||||||||||| ||||| ||||||||| |||||||||     
T  274 ccatacccgtgttttgagattgaggaaaactgatacccatacccaaactcagtcaaaacggagaaaacccgtc-aattgagtttggttctggcgggtaat 372  T
Q  129 cacggatatgagttttgttgtcatgccta 157  Q
    |||||||||| ||||||||||||||||||    
T  373 cacggatatgggttttgttgtcatgccta 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 14230 - 14089
Alignment:
Q  20 ttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgg 119  Q
    ||||| |||||||||||||||||| | ||||||||||||||| || |||| |||||||    ||||| ||| ||||||||||||||||||||||||| ||    
T  14230 ttacccgttccatacccgtgttttaa-atcggggaaaactcaaactcatacccaaacccaaacaaaacgggaaaaacccgtcaaattgggtttggtttgg 14132  T
Q  120 gcgggtaaccacggatatgagttttgttgtcatgcctacttat 162  Q
    | |||||||||||  ||||||||||||||||||| ||| ||||    
T  14131 gtgggtaaccacgagtatgagttttgttgtcatgtctagttat 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 33426 - 33579
Alignment:
Q  12 tatactcgttaccagttccatacccgtgttttgagatcggggaaaactcatacccatatccaaacct------ggtcaaaatggggaaaacccgtcaaat 105  Q
    ||||| ||||||| || ||||||||||||||||| |||||||||||| || ||||||| |||||||       | |||||| ||| ||||||||||||||    
T  33426 tatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaaacccgatcaaaacgggtaaaacccgtcaaat 33525  T
Q  106 tgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctact 159  Q
    || |||| |||| || ||||||||||||||||  ||||||||| ||||||||||    
T  33526 tgagtttagttcaggtgggtaaccacggatataggttttgttgccatgcctact 33579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 90648 - 90756
Alignment:
Q  30 catacccgtgttttgagatcggggaaaactcatacccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaacc 129  Q
    |||||||||||||||| |||||||||||| |||||||| | |||      ||||||| |||||||| ||||||||||| |||| ||||||||||||||||    
T  90648 catacccgtgttttgaaatcggggaaaacccatacccaaaccca------gtcaaaacggggaaaatccgtcaaattgagtttagttcgggcgggtaacc 90741  T
Q  130 acggatatgagtttt 144  Q
    |||| ||||||||||    
T  90742 acgggtatgagtttt 90756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 10374 - 10468
Alignment:
Q  63 acccatatccaaacctggtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    ||||||| |||||||| ||||||| ||  ||||||||||||||||| |||||||||| | ||||||| |   |||| ||||||||||||||||||    
T  10374 acccatacccaaacctagtcaaaacggaaaaaacccgtcaaattggatttggttcggacaggtaaccgcatgtatgggttttgttgtcatgccta 10468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 7798 - 7875
Alignment:
Q  81 tcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgcctac 158  Q
    |||||| |||||||||||||||||||   ||| ||||||| |||||||||||| ||||  |||||||| |||||||||    
T  7798 tcaaaacggggaaaacccgtcaaattaaatttagttcgggtgggtaaccacgggtatggattttgttggcatgcctac 7875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 197323 - 197259
Alignment:
Q  93 aaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgtcatgccta 157  Q
    |||||||||||||| |||||| ||||| | | |||||||   |||||||||||||||||||||||    
T  197323 aaacccgtcaaattaggtttgattcggacagataaccacatgtatgagttttgttgtcatgccta 197259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 39426 - 39493
Alignment:
Q  158 cttatgtttttgctgctttgcaattgtggtccttttatccaattttaactaggtcaacgcttgaatgg 225  Q
    |||||||||| ||  ||||||||| |||||| |||| ||||||||| ||| ||||||||||| |||||    
T  39426 cttatgttttagcccctttgcaatagtggtctttttgtccaattttgacttggtcaacgcttaaatgg 39493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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