View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4645_low_23 (Length: 247)
Name: NF4645_low_23
Description: NF4645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4645_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 13831207 - 13831429
Alignment:
| Q |
1 |
atgagctaaactaatccaatttaacaagtgatactcgtgtaaataaaggacaaagctaaagtaaagagaacattcgtcgcaaacgcacgaatagatattt |
100 |
Q |
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| T |
13831207 |
atgagttaaactaatccaatttaacaagtgataatcgtgtaaataaaggacaaagctaaagtaaagagaacattcgtcgcaaacgcacgaatagatattt |
13831306 |
T |
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| Q |
101 |
tttgttgtcatttgagagtctctcgatttttatttgaatctctttctaaacttagttatgtctatataattatttaaattatctgtgcttttgcttttca |
200 |
Q |
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| T |
13831307 |
tttgttgtcatttgagag--tctcgatttttatttcaatctctttctaaacttagttatgtctatataattatttaaattatc--tgcttttgcttttca |
13831402 |
T |
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| Q |
201 |
aattaagagt-agagatgctaagaaag |
226 |
Q |
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| T |
13831403 |
aactaagagtaagagatgctaagaaag |
13831429 |
T |
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