View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4647-Insertion-10 (Length: 207)
Name: NF4647-Insertion-10
Description: NF4647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4647-Insertion-10 |
 | |
|
| [»] chr3 (1 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 32541324 - 32541523
Alignment:
| Q |
8 |
aggaggagagtcaatgtcccatcaagactatttttatgaaaaaagttattgcaaggtaaaagatgctagacccctggtgagtgcaaaacatagctaattg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32541324 |
aggaggagagtcaatgtcccatcaagactatttttatgaaaaaagttattgcaaggtaaaagatgctagacccctggtgagtgcaaaacatagctaattg |
32541423 |
T |
|
| Q |
108 |
tacaatttttatgaaatttgtatcctagaagattagaaatctcaagaaaaaatgctctaattcattacggttcgaagttctaacaagtaatgcctgttat |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32541424 |
tacaatttttatgaaatttgtatcctagaagattagaaatctcaagaaaaaatgctctaattcattacggttcgaagttctaacaagtaatgcctgttat |
32541523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University