View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4647-Insertion-11 (Length: 164)
Name: NF4647-Insertion-11
Description: NF4647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4647-Insertion-11 |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 2e-81; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 2e-81
Query Start/End: Original strand, 8 - 164
Target Start/End: Original strand, 33901762 - 33901918
Alignment:
| Q |
8 |
aactcaaggtgtgttgatcaaaggtggccaagcattagaaagtgcacacaaggtgagtaaataacattggcaattgcatgcatccattgttctctcaact |
107 |
Q |
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| T |
33901762 |
aactcaaggtgtgttgatcaaaggtggccaagcattagaaagtgcacacaaggtgagtaaataacattggcaattgcatgcatccattgttctctcaact |
33901861 |
T |
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| Q |
108 |
tgccatttcaagagtaggaaactaacttgttacttacaatttttcaggtgaattgca |
164 |
Q |
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| T |
33901862 |
tgccatttcaacagtaggaaactaacttgttacttacaatttttcaggtgaattgca |
33901918 |
T |
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Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 33919284 - 33919339
Alignment:
| Q |
8 |
aactcaaggtgtgttgatcaaaggtggccaagcattagaaagtgcacacaaggtga |
63 |
Q |
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| T |
33919284 |
aactcaaggtgtgttgatcaaaggtggccaagcattagaaagtgcacacaaggtga |
33919339 |
T |
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