View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4647-Insertion-13 (Length: 69)
Name: NF4647-Insertion-13
Description: NF4647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4647-Insertion-13 |
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| [»] chr1 (2 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 58; Significance: 4e-25; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-25
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 4259337 - 4259398
Alignment:
| Q |
8 |
caaataaagtgaattctgggggccatactgctgcaaaagcagattatagatgaactttgtga |
69 |
Q |
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| T |
4259337 |
caaataaagtgaattccgggggccatactgctgcaaaagcagattatagatgaactttgtga |
4259398 |
T |
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Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-25
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 4262959 - 4263020
Alignment:
| Q |
8 |
caaataaagtgaattctgggggccatactgctgcaaaagcagattatagatgaactttgtga |
69 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4262959 |
caaataaagtgaattccgggggccatactgctgcaaaagcagattatagatgaactttgtga |
4263020 |
T |
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