View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4647-Insertion-27 (Length: 375)

Name: NF4647-Insertion-27
Description: NF4647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4647-Insertion-27
NF4647-Insertion-27
[»] chr8 (1 HSPs)
chr8 (10-375)||(929874-930240)


Alignment Details
Target: chr8 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 10 - 375
Target Start/End: Original strand, 929874 - 930240
Alignment:
Q  10 tatttctttattttatgatcatctccaaatcatgttgtattagttgttgttaatgatgttcattgttgatattaattgtgaatgttaattgtgattaact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  929874 tatttctttattttatgatcatctccaaatcatgttgtattagttgttgttaatgatgttcattgttgatattaattgtgaatgttaattgtgattaact 929973  T
Q  110 atagatatgctatttttcatcagttttggaagtgttgaaatacatgattccactgtatagtatataccatgattatatatcaatggcgtgttttacttat 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  929974 atagatatgctatttttcatcagttttggaagtgttgaaatacatgattccactgtatagtatataccatgattatatatcaatggcgtgttttactaat 930073  T
Q  210 cttttattc-nnnnnnnnnnnnnnttggttatcctaagtcaattatattggtgtatcctacaccttagacttgctttttgttgttgatttctagtttaac 308  Q
    |||||||||               ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  930074 cttttattcaaaaaacaaaaaaaattggttatcctgagtcaattatattggtgtatcctacaccttagacttgctttttgttgttgatttctagtttaac 930173  T
Q  309 actttttgactgttatagtacgtactgttctgccacggtcttgcttgcaccacgactactttcaagt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  930174 actttttgactgttatagtacgtactgttctgccacggtcttgcttgcaccacaactactttcaagt 930240  T

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