View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4647-Insertion-32 (Length: 234)
Name: NF4647-Insertion-32
Description: NF4647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4647-Insertion-32 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 8 - 234
Target Start/End: Original strand, 51727512 - 51727738
Alignment:
| Q |
8 |
tacaatccatattggatattgtgcggaaattaacaatcagttgtgtgattaagtgtgaccttccaaaccataacaaattcagtatcaagcaacaatcata |
107 |
Q |
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| T |
51727512 |
tacaatctatattggatattgtgcggaaattaacaatcagttgtgtgattaagtgtgaccttccaaaccataacaaattcagtatcaagcaataatcata |
51727611 |
T |
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| Q |
108 |
accagtaactatctaagaatgaagcaaaatnnnnnnngaacttgacccaagatttgtatnnnnnnngaacttgcacctcaagctacattactgtttgtat |
207 |
Q |
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|||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
51727612 |
accagtaactatctaagaatgaagcaaaataaaaaaagaacttgactcaagatttgtataaaaaaagaacttgcacctcaagctacattactgtttgtat |
51727711 |
T |
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| Q |
208 |
attttcaattcatttgcgaatgctgca |
234 |
Q |
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| T |
51727712 |
attttcaattcatttgcaaatgctgca |
51727738 |
T |
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