View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4647_high_27 (Length: 251)
Name: NF4647_high_27
Description: NF4647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4647_high_27 |
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Alignment Details
Target: chr1 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 48879161 - 48879013
Alignment:
| Q |
1 |
cctgcaataagtactgggaattggactgcacgaaaagccgcaataaaacgcgcaataaaaggcaactaagtctaagtgtgacagaagagagtggaatact |
100 |
Q |
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| T |
48879161 |
cctgcaataagtactgggaattggactgcacgaaaagccgcaataaaacgcgcaataaaaggcaactaaat------gtgacagaagagagtggaatact |
48879068 |
T |
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| Q |
101 |
catggctggcttaagcacaacaagtcaaaaacaatctattatgtaaatataacat |
155 |
Q |
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| T |
48879067 |
catggctggcttaagcacaacaagtcaaaaacagtctattatgtaaatataacat |
48879013 |
T |
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