View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4647_high_40 (Length: 215)
Name: NF4647_high_40
Description: NF4647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4647_high_40 |
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Alignment Details
Target: chr4 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 26846069 - 26846253
Alignment:
| Q |
13 |
gagatgaagatccagtgtgatgcatgtcacaaacaagaggcctccttgttttgccctgcagatgaagcagctctctgcaatcaatgtgatcgcaatatcc |
112 |
Q |
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| T |
26846069 |
gagatgaagatccagtgtgatgcatgtcacaaacaagaggcctccttgttttgccctgcagatgaagcagctctctgcaatcaatgtgatcgcaatatcc |
26846168 |
T |
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| Q |
113 |
actatgccaacaaggtctctgctaaacacaaacgcttcactcttcaccaccccacttccaaagacactcctctctgtgatatctg |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
26846169 |
actatgccaacaaggtctctgctaaacacaaacgcttcactcttcaccaccccacttccaaagacacccctctctgtgatatctg |
26846253 |
T |
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