View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4648-Insertion-5 (Length: 433)

Name: NF4648-Insertion-5
Description: NF4648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4648-Insertion-5
NF4648-Insertion-5
[»] chr3 (73 HSPs)
chr3 (151-433)||(3965787-3966069)
chr3 (8-149)||(44670260-44670401)
chr3 (9-151)||(11140510-11140652)
chr3 (8-150)||(44365872-44366015)
chr3 (8-151)||(29786532-29786677)
chr3 (16-149)||(42067849-42067984)
chr3 (8-150)||(46959815-46959958)
chr3 (9-150)||(42363928-42364070)
chr3 (9-150)||(38785082-38785224)
chr3 (9-152)||(47948390-47948534)
chr3 (9-144)||(35171197-35171333)
chr3 (8-150)||(876222-876365)
chr3 (8-127)||(31309142-31309262)
chr3 (17-151)||(40650343-40650478)
chr3 (9-146)||(42848194-42848332)
chr3 (8-150)||(45636351-45636495)
chr3 (76-153)||(39629945-39630023)
chr3 (9-89)||(4660019-4660099)
chr3 (21-156)||(52082037-52082172)
chr3 (9-75)||(37492181-37492247)
chr3 (73-151)||(29347310-29347389)
chr3 (41-151)||(378602-378712)
chr3 (8-151)||(42621847-42621991)
chr3 (8-150)||(1129129-1129272)
chr3 (9-142)||(7672065-7672198)
chr3 (99-151)||(37492251-37492303)
chr3 (10-151)||(54262543-54262684)
chr3 (106-150)||(4663146-4663190)
chr3 (19-150)||(42478959-42479091)
chr3 (9-147)||(7862709-7862848)
chr3 (9-151)||(19547753-19547896)
chr3 (16-95)||(39678378-39678457)
chr3 (8-153)||(44379411-44379557)
chr3 (10-150)||(29806275-29806415)
chr3 (9-149)||(53516583-53516723)
chr3 (59-150)||(37520702-37520794)
chr3 (58-157)||(44653484-44653584)
chr3 (10-150)||(9252122-9252259)
chr3 (8-95)||(39252946-39253033)
chr3 (9-150)||(3082178-3082319)
chr3 (10-127)||(19914300-19914417)
chr3 (9-150)||(21288813-21288954)
chr3 (9-95)||(26457009-26457095)
chr3 (9-150)||(27647745-27647886)
chr3 (8-42)||(52776557-52776591)
chr3 (58-150)||(40478071-40478164)
chr3 (8-148)||(47746092-47746233)
chr3 (9-45)||(4393249-4393285)
chr3 (8-147)||(29628986-29629125)
chr3 (7-75)||(32717915-32717983)
chr3 (8-147)||(37127807-37127946)
chr3 (8-95)||(41282586-41282673)
chr3 (8-150)||(51344636-51344778)
chr3 (8-42)||(542628-542662)
chr3 (10-92)||(7347356-7347437)
chr3 (8-42)||(15298319-15298353)
chr3 (10-92)||(23796043-23796124)
chr3 (8-42)||(54831087-54831121)
chr3 (9-90)||(3136527-3136607)
chr3 (8-148)||(41982248-41982389)
chr3 (9-42)||(43744333-43744366)
chr3 (10-95)||(54009172-54009256)
chr3 (9-121)||(54788579-54788692)
chr3 (106-150)||(788473-788517)
chr3 (10-42)||(7157147-7157179)
chr3 (8-40)||(13451530-13451562)
chr3 (114-150)||(25592012-25592048)
chr3 (10-94)||(35320418-35320501)
chr3 (10-94)||(45927486-45927569)
chr3 (8-40)||(47243948-47243980)
chr3 (10-94)||(50465738-50465821)
chr3 (10-74)||(52024514-52024578)
chr3 (10-70)||(53186270-53186330)
[»] chr1 (78 HSPs)
chr1 (174-433)||(13992443-13992701)
chr1 (8-151)||(37499006-37499149)
chr1 (10-141)||(28494036-28494167)
chr1 (9-155)||(6519982-6520129)
chr1 (11-150)||(23056966-23057107)
chr1 (11-150)||(23061267-23061408)
chr1 (8-151)||(51369580-51369725)
chr1 (8-156)||(52303276-52303424)
chr1 (11-150)||(5956526-5956667)
chr1 (9-146)||(18642133-18642271)
chr1 (16-150)||(35305422-35305558)
chr1 (8-149)||(8461528-8461670)
chr1 (9-150)||(51985199-51985341)
chr1 (9-153)||(45423879-45424024)
chr1 (9-146)||(39971273-39971411)
chr1 (16-150)||(921842-921977)
chr1 (20-146)||(23459553-23459680)
chr1 (9-146)||(39190567-39190705)
chr1 (9-146)||(45673581-45673719)
chr1 (9-144)||(46770737-46770873)
chr1 (9-146)||(51520078-51520216)
chr1 (8-144)||(38262140-38262276)
chr1 (8-127)||(50905842-50905962)
chr1 (8-149)||(26102474-26102616)
chr1 (17-127)||(43306805-43306915)
chr1 (9-95)||(16482841-16482926)
chr1 (9-150)||(50239277-50239418)
chr1 (12-107)||(29106408-29106503)
chr1 (10-154)||(7122221-7122365)
chr1 (9-149)||(26010943-26011083)
chr1 (8-150)||(12105160-12105303)
chr1 (8-150)||(52345599-52345742)
chr1 (9-94)||(23304673-23304756)
chr1 (9-153)||(33909955-33910099)
chr1 (21-148)||(2247322-2247449)
chr1 (8-151)||(12178863-12179006)
chr1 (8-151)||(25702434-25702578)
chr1 (10-74)||(48796295-48796359)
chr1 (8-75)||(11444346-11444413)
chr1 (8-95)||(42275391-42275478)
chr1 (10-152)||(51610534-51610678)
chr1 (8-149)||(51977859-51978000)
chr1 (9-90)||(10178933-10179013)
chr1 (36-148)||(34038163-34038276)
chr1 (27-150)||(24511862-24511985)
chr1 (8-95)||(6329304-6329391)
chr1 (10-148)||(30547876-30548014)
chr1 (9-151)||(35910428-35910570)
chr1 (8-150)||(38261067-38261209)
chr1 (9-158)||(632640-632789)
chr1 (9-95)||(52441133-52441219)
chr1 (38-150)||(51184333-51184445)
chr1 (10-94)||(29171431-29171514)
chr1 (10-74)||(34100789-34100853)
chr1 (8-76)||(45427200-45427268)
chr1 (10-94)||(50502402-50502485)
chr1 (8-95)||(7227626-7227713)
chr1 (9-92)||(27353111-27353193)
chr1 (10-92)||(10635305-10635386)
chr1 (9-95)||(21073029-21073115)
chr1 (8-42)||(22667373-22667407)
chr1 (8-42)||(26423949-26423983)
chr1 (8-54)||(26921772-26921818)
chr1 (8-42)||(28712006-28712040)
chr1 (8-54)||(28791463-28791509)
chr1 (58-95)||(477498-477535)
chr1 (21-94)||(11778693-11778765)
chr1 (9-94)||(18992615-18992699)
chr1 (9-151)||(32912210-32912351)
chr1 (9-149)||(33098706-33098846)
chr1 (21-50)||(35242407-35242436)
chr1 (59-151)||(46362022-46362115)
chr1 (9-54)||(52261078-52261123)
chr1 (10-54)||(2620940-2620984)
chr1 (59-95)||(17553872-17553908)
chr1 (10-42)||(24245590-24245622)
chr1 (10-74)||(45809711-45809775)
chr1 (10-94)||(48481115-48481198)
[»] chr7 (46 HSPs)
chr7 (8-152)||(42711193-42711337)
chr7 (8-150)||(41913096-41913238)
chr7 (8-150)||(40942139-40942282)
chr7 (8-150)||(21699292-21699435)
chr7 (18-150)||(28327339-28327473)
chr7 (9-146)||(30863057-30863195)
chr7 (8-127)||(3910193-3910314)
chr7 (9-152)||(30623718-30623862)
chr7 (9-146)||(38129389-38129527)
chr7 (9-154)||(1690989-1691133)
chr7 (34-147)||(41381771-41381886)
chr7 (9-150)||(30936094-30936235)
chr7 (52-151)||(27956591-27956692)
chr7 (8-154)||(8770366-8770512)
chr7 (8-150)||(45857475-45857617)
chr7 (11-151)||(44963822-44963962)
chr7 (8-63)||(45458829-45458884)
chr7 (78-154)||(45461660-45461737)
chr7 (9-150)||(42975160-42975301)
chr7 (8-92)||(11486259-11486342)
chr7 (9-144)||(20438822-20438957)
chr7 (106-150)||(18990450-18990494)
chr7 (8-150)||(26605056-26605199)
chr7 (8-150)||(43750339-43750481)
chr7 (10-92)||(23561371-23561452)
chr7 (9-150)||(34118735-34118876)
chr7 (9-95)||(41046894-41046980)
chr7 (11-92)||(41809466-41809546)
chr7 (10-150)||(43631055-43631195)
chr7 (10-94)||(15090934-15091017)
chr7 (10-74)||(16087022-16087086)
chr7 (10-42)||(40379079-40379111)
chr7 (8-75)||(24203131-24203198)
chr7 (9-92)||(31482637-31482719)
chr7 (59-149)||(35291327-35291418)
chr7 (8-75)||(48900587-48900654)
chr7 (8-42)||(1343285-1343319)
chr7 (9-95)||(3214785-3214871)
chr7 (9-94)||(8577982-8578064)
chr7 (8-54)||(43069341-43069387)
chr7 (9-42)||(27276042-27276075)
chr7 (10-42)||(523800-523832)
chr7 (10-74)||(2291046-2291110)
chr7 (71-150)||(15954587-15954667)
chr7 (59-95)||(32529236-32529272)
chr7 (59-95)||(37504615-37504651)
[»] chr8 (62 HSPs)
chr8 (8-150)||(34332375-34332517)
chr8 (8-156)||(28090454-28090602)
chr8 (8-150)||(29773708-29773850)
chr8 (8-150)||(44935162-44935304)
chr8 (8-129)||(39171103-39171224)
chr8 (8-150)||(29459897-29460041)
chr8 (8-149)||(23286828-23286970)
chr8 (16-150)||(37511359-37511495)
chr8 (9-150)||(15725890-15726032)
chr8 (8-150)||(946232-946377)
chr8 (9-151)||(23274887-23275031)
chr8 (9-150)||(37161772-37161920)
chr8 (9-144)||(14498310-14498446)
chr8 (48-150)||(39170998-39171103)
chr8 (8-152)||(12162938-12163084)
chr8 (8-152)||(12407366-12407512)
chr8 (9-150)||(29229176-29229318)
chr8 (9-146)||(36002623-36002761)
chr8 (17-146)||(38502463-38502592)
chr8 (9-144)||(10280824-10280960)
chr8 (9-150)||(17642338-17642479)
chr8 (9-147)||(2273274-2273412)
chr8 (10-150)||(43049801-43049941)
chr8 (33-126)||(23275078-23275173)
chr8 (8-147)||(39029580-39029719)
chr8 (10-150)||(31158820-31158960)
chr8 (8-151)||(29454142-29454286)
chr8 (9-150)||(10706555-10706697)
chr8 (9-152)||(29265587-29265731)
chr8 (10-144)||(36886168-36886303)
chr8 (8-147)||(39300086-39300226)
chr8 (12-92)||(43921398-43921477)
chr8 (8-95)||(36162456-36162543)
chr8 (9-54)||(529535-529580)
chr8 (9-90)||(16323823-16323903)
chr8 (9-90)||(26439584-26439664)
chr8 (107-148)||(43485053-43485094)
chr8 (106-150)||(2732145-2732189)
chr8 (106-150)||(26439509-26439553)
chr8 (8-75)||(3642938-3643005)
chr8 (8-75)||(19725310-19725377)
chr8 (115-150)||(37466054-37466089)
chr8 (59-149)||(38329452-38329543)
chr8 (21-92)||(42444299-42444369)
chr8 (9-59)||(2732056-2732106)
chr8 (8-54)||(12180185-12180231)
chr8 (8-54)||(12424613-12424659)
chr8 (8-42)||(16871673-16871707)
chr8 (8-42)||(27970276-27970310)
chr8 (10-92)||(36274623-36274704)
chr8 (8-90)||(39347193-39347274)
chr8 (8-42)||(42165015-42165049)
chr8 (10-150)||(17792470-17792610)
chr8 (9-42)||(24247699-24247732)
chr8 (13-94)||(32238205-32238284)
chr8 (58-95)||(34634167-34634204)
chr8 (10-70)||(196147-196207)
chr8 (10-70)||(310984-311044)
chr8 (10-94)||(12266129-12266212)
chr8 (10-74)||(24937661-24937725)
chr8 (10-74)||(27172180-27172244)
chr8 (10-42)||(45401414-45401446)
[»] chr2 (51 HSPs)
chr2 (9-149)||(1353771-1353911)
chr2 (9-150)||(34665835-34665976)
chr2 (8-150)||(5389202-5389344)
chr2 (8-148)||(11227890-11228031)
chr2 (11-150)||(37083476-37083617)
chr2 (8-150)||(4673601-4673745)
chr2 (8-149)||(38963068-38963211)
chr2 (8-152)||(3383189-3383335)
chr2 (9-144)||(11813198-11813335)
chr2 (8-145)||(15771314-15771452)
chr2 (9-150)||(33423034-33423176)
chr2 (8-150)||(14532824-14532967)
chr2 (8-153)||(6884422-6884571)
chr2 (9-151)||(59182-59326)
chr2 (17-152)||(42427566-42427702)
chr2 (16-148)||(3810452-3810585)
chr2 (9-158)||(6438164-6438313)
chr2 (9-136)||(12547632-12547759)
chr2 (9-150)||(6513262-6513403)
chr2 (8-156)||(1580241-1580390)
chr2 (17-151)||(45690498-45690632)
chr2 (106-149)||(37909720-37909763)
chr2 (8-42)||(25332454-25332488)
chr2 (9-153)||(30981149-30981295)
chr2 (9-153)||(33494199-33494345)
chr2 (9-94)||(42640908-42640990)
chr2 (10-94)||(26738298-26738381)
chr2 (8-75)||(5155769-5155836)
chr2 (8-95)||(27400993-27401080)
chr2 (8-95)||(39620457-39620544)
chr2 (8-42)||(2640181-2640215)
chr2 (59-150)||(3261220-3261312)
chr2 (8-42)||(12071419-12071453)
chr2 (8-42)||(15426132-15426166)
chr2 (8-74)||(16637105-16637170)
chr2 (8-42)||(25712826-25712860)
chr2 (8-90)||(34438248-34438329)
chr2 (10-151)||(43690021-43690162)
chr2 (9-42)||(8362509-8362542)
chr2 (9-90)||(20212214-20212294)
chr2 (9-42)||(28181398-28181431)
chr2 (8-69)||(31928338-31928399)
chr2 (10-75)||(40370737-40370802)
chr2 (10-42)||(5084948-5084980)
chr2 (10-94)||(6657711-6657794)
chr2 (10-94)||(7504080-7504163)
chr2 (10-42)||(16814960-16814992)
chr2 (10-42)||(16854240-16854272)
chr2 (10-42)||(21836551-21836583)
chr2 (10-42)||(36049573-36049605)
chr2 (10-94)||(39878977-39879060)
[»] scaffold0077 (2 HSPs)
scaffold0077 (8-150)||(48273-48415)
scaffold0077 (103-150)||(58123-58170)
[»] chr4 (78 HSPs)
chr4 (8-150)||(55722741-55722883)
chr4 (8-149)||(41759660-41759801)
chr4 (16-150)||(48578907-48579041)
chr4 (8-152)||(28037948-28038093)
chr4 (8-148)||(53388848-53388989)
chr4 (8-150)||(47302243-47302386)
chr4 (8-148)||(37855384-37855526)
chr4 (9-155)||(3716589-3716736)
chr4 (8-150)||(51435812-51435956)
chr4 (9-150)||(38836114-38836256)
chr4 (16-150)||(11109596-11109733)
chr4 (9-153)||(34280221-34280366)
chr4 (8-150)||(37518965-37519108)
chr4 (8-150)||(37523181-37523324)
chr4 (9-151)||(33075978-33076122)
chr4 (9-144)||(27539181-27539317)
chr4 (9-148)||(30343089-30343232)
chr4 (26-146)||(30539841-30539962)
chr4 (26-150)||(52592074-52592199)
chr4 (9-144)||(46041965-46042101)
chr4 (16-111)||(14802983-14803080)
chr4 (9-146)||(52589336-52589474)
chr4 (17-146)||(43137375-43137505)
chr4 (9-149)||(9858514-9858654)
chr4 (9-148)||(31908707-31908846)
chr4 (9-149)||(36091323-36091463)
chr4 (8-95)||(36631091-36631178)
chr4 (9-150)||(47302661-47302802)
chr4 (8-148)||(24979944-24980084)
chr4 (8-155)||(42177337-42177485)
chr4 (8-95)||(50776035-50776122)
chr4 (8-149)||(5970700-5970842)
chr4 (9-152)||(32570634-32570776)
chr4 (106-150)||(31681548-31681592)
chr4 (8-95)||(32288959-32289046)
chr4 (8-150)||(53695386-53695528)
chr4 (9-95)||(9356437-9356523)
chr4 (9-150)||(46215772-46215913)
chr4 (8-121)||(50383358-50383472)
chr4 (59-148)||(50607999-50608089)
chr4 (59-151)||(23058764-23058857)
chr4 (10-150)||(30060530-30060670)
chr4 (21-137)||(30891170-30891286)
chr4 (9-45)||(18052041-18052077)
chr4 (9-146)||(25607694-25607830)
chr4 (59-150)||(30348163-30348255)
chr4 (8-150)||(27761400-27761543)
chr4 (8-95)||(38008417-38008504)
chr4 (10-148)||(43958996-43959134)
chr4 (8-75)||(46564788-46564855)
chr4 (8-95)||(48647075-48647162)
chr4 (8-42)||(9579772-9579806)
chr4 (8-42)||(9585467-9585501)
chr4 (8-42)||(20927705-20927739)
chr4 (8-42)||(23390764-23390798)
chr4 (8-42)||(25814489-25814523)
chr4 (8-42)||(30839351-30839385)
chr4 (8-42)||(30951232-30951266)
chr4 (8-42)||(40319264-40319298)
chr4 (9-95)||(43363593-43363678)
chr4 (8-42)||(52104516-52104550)
chr4 (10-92)||(52257398-52257479)
chr4 (8-42)||(52940745-52940779)
chr4 (9-42)||(10332900-10332933)
chr4 (10-75)||(47920541-47920606)
chr4 (9-42)||(48254049-48254082)
chr4 (8-89)||(50498389-50498470)
chr4 (10-42)||(16004642-16004674)
chr4 (10-74)||(27736664-27736728)
chr4 (11-95)||(32845711-32845795)
chr4 (10-74)||(33491677-33491741)
chr4 (10-42)||(38955151-38955183)
chr4 (10-42)||(38961073-38961105)
chr4 (8-76)||(39512920-39512988)
chr4 (8-151)||(45692621-45692765)
chr4 (10-42)||(46222101-46222133)
chr4 (10-94)||(54499840-54499923)
chr4 (115-147)||(56361318-56361350)
[»] chr6 (38 HSPs)
chr6 (8-158)||(2259167-2259318)
chr6 (8-150)||(17545867-17546009)
chr6 (10-150)||(6848774-6848920)
chr6 (8-150)||(32833774-32833917)
chr6 (9-153)||(13390652-13390797)
chr6 (8-150)||(24213175-24213318)
chr6 (16-149)||(24487286-24487421)
chr6 (9-152)||(8401412-8401559)
chr6 (17-146)||(4110827-4110957)
chr6 (17-138)||(26358564-26358686)
chr6 (9-146)||(1096481-1096618)
chr6 (9-149)||(15383204-15383344)
chr6 (8-92)||(20469095-20469178)
chr6 (107-151)||(34195878-34195922)
chr6 (8-95)||(2564990-2565077)
chr6 (8-95)||(9687039-9687126)
chr6 (58-150)||(33574666-33574759)
chr6 (58-150)||(33574844-33574937)
chr6 (8-42)||(7344429-7344463)
chr6 (21-95)||(18772136-18772210)
chr6 (10-92)||(21970573-21970654)
chr6 (10-150)||(31644410-31644550)
chr6 (8-42)||(3448209-3448243)
chr6 (8-42)||(5078411-5078445)
chr6 (8-54)||(6265039-6265085)
chr6 (9-146)||(8376024-8376161)
chr6 (8-54)||(17010626-17010672)
chr6 (8-42)||(22734966-22735000)
chr6 (9-95)||(26958655-26958741)
chr6 (58-95)||(8549619-8549656)
chr6 (10-47)||(18667793-18667830)
chr6 (9-90)||(30020418-30020498)
chr6 (8-53)||(33610798-33610843)
chr6 (106-150)||(6264943-6264987)
chr6 (10-94)||(9226467-9226550)
chr6 (58-149)||(11763174-11763266)
chr6 (8-40)||(32430291-32430323)
chr6 (10-94)||(34315182-34315265)
[»] chr5 (60 HSPs)
chr5 (16-153)||(13410812-13410951)
chr5 (8-151)||(42917381-42917525)
chr5 (9-151)||(32467307-32467450)
chr5 (9-153)||(34302912-34303057)
chr5 (9-147)||(6561090-6561229)
chr5 (9-127)||(1661715-1661834)
chr5 (16-149)||(21605920-21606055)
chr5 (12-146)||(36338849-36338984)
chr5 (9-155)||(43237350-43237497)
chr5 (17-146)||(3056668-3056798)
chr5 (8-150)||(6532843-6532986)
chr5 (9-144)||(18228466-18228602)
chr5 (9-155)||(2414188-2414335)
chr5 (9-151)||(9535131-9535274)
chr5 (18-157)||(24098143-24098283)
chr5 (9-146)||(2141506-2141644)
chr5 (16-111)||(6113812-6113909)
chr5 (9-111)||(6318325-6318428)
chr5 (8-110)||(2029616-2029719)
chr5 (9-150)||(13091178-13091319)
chr5 (10-151)||(22780778-22780920)
chr5 (9-150)||(14967496-14967637)
chr5 (9-146)||(9589473-9589610)
chr5 (8-149)||(29744166-29744307)
chr5 (9-150)||(12362357-12362498)
chr5 (8-144)||(41802371-41802507)
chr5 (9-144)||(2318431-2318567)
chr5 (8-152)||(13127244-13127389)
chr5 (8-92)||(1490746-1490829)
chr5 (9-150)||(6260282-6260424)
chr5 (8-151)||(13795272-13795414)
chr5 (10-90)||(37431411-37431490)
chr5 (8-150)||(36427905-36428048)
chr5 (9-91)||(35682359-35682440)
chr5 (8-149)||(40563116-40563258)
chr5 (9-90)||(27117980-27118060)
chr5 (9-149)||(39816506-39816646)
chr5 (10-94)||(13588922-13589005)
chr5 (8-88)||(35817412-35817491)
chr5 (10-74)||(39041382-39041446)
chr5 (10-74)||(40584939-40585003)
chr5 (106-149)||(3425090-3425133)
chr5 (8-95)||(34259803-34259890)
chr5 (59-148)||(479676-479766)
chr5 (10-147)||(10400704-10400841)
chr5 (8-42)||(14054677-14054711)
chr5 (9-152)||(31588500-31588643)
chr5 (8-42)||(32092345-32092379)
chr5 (10-147)||(36156107-36156244)
chr5 (9-94)||(12334572-12334657)
chr5 (9-90)||(21051382-21051462)
chr5 (106-157)||(5512675-5512727)
chr5 (10-70)||(10453546-10453606)
chr5 (9-53)||(15264308-15264352)
chr5 (9-45)||(19189373-19189409)
chr5 (10-74)||(24431876-24431940)
chr5 (106-150)||(28332484-28332528)
chr5 (10-94)||(28770004-28770087)
chr5 (10-74)||(32455562-32455626)
chr5 (10-74)||(43059561-43059625)
[»] scaffold0283 (1 HSPs)
scaffold0283 (16-150)||(6510-6644)
[»] scaffold0005 (1 HSPs)
scaffold0005 (16-111)||(36647-36744)
[»] scaffold0113 (1 HSPs)
scaffold0113 (9-156)||(29509-29657)
[»] scaffold0604 (1 HSPs)
scaffold0604 (9-149)||(2285-2425)
[»] scaffold0667 (1 HSPs)
scaffold0667 (8-151)||(96-240)
[»] scaffold0625 (1 HSPs)
scaffold0625 (106-150)||(6266-6310)
[»] scaffold0008 (1 HSPs)
scaffold0008 (10-150)||(45339-45479)
[»] scaffold0121 (1 HSPs)
scaffold0121 (10-42)||(13869-13901)
[»] scaffold0841 (1 HSPs)
scaffold0841 (8-42)||(3164-3198)


Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 151 - 433
Target Start/End: Complemental strand, 3966069 - 3965787
Alignment:
Q  151 atattttacattgtctatatgaaactacaaatcaactattaagatctgacattcaaacct-gaccatnnnnnnntttaaatgtcaaactaatttatatct 249  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||  ||||||||| || |||       ||||||| ||||||||||||||||||    
T  3966069 atattttacattgtctatgtggaactacaaatcaactattaagatctgatgttcaaacctcgatcatcaaaaa-tttaaatatcaaactaatttatatct 3965971  T
Q  250 tatatccgatagggtacagccccccattaactcaatttaaaataagtgccgaaattctttgagaatcaaatccgacaactagagagtctttgatttcata 349  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3965970 tatatctgatagggtacagccccccattaactcaatttaaaataagtgccgaaattctttgagaatcaaatccgacaactagagagtctttgatttcata 3965871  T
Q  350 tcaatgccacttgtggctacaaaatttttgccactctgtttcattaggccttttttcttcaaaatttgtgtcttttgtcatagc 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3965870 tcaatgccacttgtggctacaaaatttttgccactctgtttcattaggccttttttcttcaaaatttgtgtcttttgtcatagc 3965787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 44670401 - 44670260
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  44670401 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacttatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaaa 44670302  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||| || |||||||||||| |||||||||||||||||||||    
T  44670301 gtaccggcacaccttaatttacggatgtaccgtagaagttcc 44670260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 11140510 - 11140652
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgagag 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  11140510 ttttttcctataaaatgatattttctaaaatatatatgtcaacaaacacctatttcttttataaaaaatgatagtttgtttataaaaatgtaagcgagag 11140609  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||| ||||||||||||||||||| |||||||||||||||||||    
T  11140610 taccggtacaccttaatttgcgggtgtaccgtagaagttccca 11140652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 44365872 - 44366015
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat-aaaaaatgatagttaatttataaaaatgtaagcgag 106  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44365872 gttttttcttataaaatgatattttttaaaatatatatgtcaacaaacacctatttctttcataaaaaaatgatagttaatttataaaaatgtaagcgag 44365971  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||||||||| ||| |||||| |||||||||||    
T  44365972 agtaccggtacaccttaatttacgggtgtaccatagaagttccc 44366015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 29786677 - 29786532
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcga 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||    
T  29786677 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacttattttctttcataaaaaatgatagttaatttataaaaattgtaagcga 29786578  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    |||||| ||||||||||||||||| | |||||||||||||||||||    
T  29786577 gagtaccggtacaccttaatttgcaggtgtaccgtagaagttccca 29786532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 42067849 - 42067984
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacacctattt-ctttcataaaaaatgatagttaatttataaaaat-gtaagcgagagtactg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  42067849 ttataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccg 42067948  T
Q  114 gtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||||||||||||||||| |||||||||||||||||    
T  42067949 gtacaccttaatttgcgggtgtaccgtagaagttcc 42067984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 46959815 - 46959958
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa-atgtaagcgag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||    
T  46959815 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaagttgtaagcgag 46959914  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| | |||||| |||||||| | ||||||||| ||||||||    
T  46959915 agtaccgatacaccgtaatttgcaggtgtaccgtaaaagttccc 46959958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 42364070 - 42363928
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||| |||    
T  42364070 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttttttcataaaaaattatagttaaattataaaaattgtaagctaga 42363971  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| | |||||| |||||||| | ||||||||||||||||||    
T  42363970 gtaccgatacaccgtaatttgcaggtgtaccgtagaagttccc 42363928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 38785224 - 38785082
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa--tgtaagcgag 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||  ||||||||||    
T  38785224 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcat-aaaaattatagttaatttataaaaaattgtaagcgag 38785126  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| |||||||| |||||||| | ||||||||||||||||||    
T  38785125 agtaccggtacaccgtaatttgcaggtgtaccgtagaagttccc 38785082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 47948534 - 47948390
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  47948534 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgaga 47948435  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    |||| |||||||| | |||| ||| |||||| ||||||| |||||    
T  47948434 gtaccggtacaccgtcatttacgggtgtaccatagaagtccccat 47948390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 35171333 - 35171197
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||    
T  35171333 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattataagcgaga 35171234  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||| |||||||| |||||| ||| |||||| |||||    
T  35171233 gtaccggtacaccgtaatttacgggtgtaccatagaa 35171197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 876365 - 876222
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||| ||||||||| | ||||||||    
T  876365 gttttatcttataaaatgatattttctaaaatatatatgtcaacaaacaactattttcttcataaaaaatgatagttaaattataaaaattataagcgag 876266  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||  ||||| | |||||||||| ||||||||||||||||||    
T  876265 agtaccagtacatcgtaatttgcgggtgtaccgtagaagttccc 876222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 31309142 - 31309262
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||| ||||    
T  31309142 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaattatagttaatttataaaaattgtaaccgag 31309241  T
Q  107 agtactggtacaccttaattt 127  Q
    ||||| |||||||| ||||||    
T  31309242 agtaccggtacaccgtaattt 31309262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 40650343 - 40650478
Alignment:
Q  17 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| | |    
T  40650343 tataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgat 40650442  T
Q  116 acaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||| |||||| ||  |||||| ||||||| ||||    
T  40650443 acaccgtaatttacgagtgtaccatagaagtcccca 40650478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 42848332 - 42848194
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| ||    
T  42848332 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcggga 42848233  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||| |||||||| | |||| ||| |||| | |||||||    
T  42848232 gtaccggtacaccgtcatttacgggtgtatcatagaagt 42848194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 45636351 - 45636495
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  45636351 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaatacctattttctttcataaaaaatgatagttaatttataaaaattataagcga 45636450  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    | ||||  ||| |  ||||||| ||  ||||||||||||||||||    
T  45636451 gtgtaccagtatattttaatttacgagtgtaccgtagaagttccc 45636495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 39630023 - 39629945
Alignment:
Q  76 atgatagttaatttataaaaat-gtaagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttcccata 153  Q
    |||||||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  39630023 atgatagttaatttataaaaattgtaagcgatagtaccggtacatcttaatttgcggatgtaccgtagaagttcccata 39629945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 4660019 - 4660099
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattt 89  Q
    |||| |||||| |||| ||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  4660019 ttttctcttatgaaattatattttttaaaatatatatgtcaacaaacagctatttttttcataaaaaatgatagttaattt 4660099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 52082172 - 52082037
Alignment:
Q  21 aaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacac 119  Q
    |||||||||||||||||||||| || |||||||| | || ||| ||||||||||| | |||||| |||||||||  | | |||  ||||||| |||||||    
T  52082172 aaatgatattttctaaaatataaatatcaacaaataactttttatttcataaaaa-taatagttcatttataaatttttgaagtaagagtaccggtacac 52082074  T
Q  120 cttaatttgcggatgtaccgtagaagttcccatattt 156  Q
    |||||||||||| |||||||||||||||| |||||||    
T  52082073 cttaatttgcgggtgtaccgtagaagttctcatattt 52082037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 37492181 - 37492247
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  37492181 ttttttcttataaaatgatattttttaaaatatatatgtcaacaaacacctattttcttcataaaaa 37492247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 29347389 - 29347310
Alignment:
Q  73 aaaatgatagttaatttataaaaat-gtaagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||   ||||||||| |||||||||||||||||||    
T  29347389 aaaatgatagttaatttataaaaattgtaagcgagagtaccggtacactgcaatttgcgggtgtaccgtagaagttccca 29347310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 378712 - 378602
Alignment:
Q  41 tatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgagagtactggtacaccttaatttgcggatgtaccgt 140  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||  ||| ||  |||| |||||||  |||||| ||| |||||| |    
T  378712 tatatgtcaacaaacacttattttcttcataaaaaatgatagttaatttataaaaattaaagtgatggtaccggtacactgtaatttacgggtgtaccat 378613  T
Q  141 agaagttccca 151  Q
    |||||| ||||    
T  378612 agaagtcccca 378602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 42621991 - 42621847
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||||| || | ||||||||| || |  ||||| | |||||| || ||||||||||| | |||||||||||||| | | |||| ||    
T  42621991 gttttttcttatgaaatgatgttctataaaatataaatattgacaaataactatttattacataaaaaatggtcgttaatttataaaattatgaagcaag 42621892  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||||||||||||| | |||| |  |||||||||||||||||||    
T  42621891 agtactggtacacctcattttgtgagtgtaccgtagaagttccca 42621847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 1129272 - 1129129
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||||| |||| ||||||||| || |  ||||| | |||||| || ||||||||||||| |||||||||||||| | | ||||  |    
T  1129272 gttttttcttatgaaatgatgttttataaaatataaatattgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcagg 1129173  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||| | |||| |  ||||||||||||||||||    
T  1129172 agtaccggtacacctcactttgtgagtgtaccgtagaagttccc 1129129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 7672065 - 7672198
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||||||||||||||| ||||||||||||||| || |||||||| | || ||| || | | |||||| |||||||||| | |||||| | |||   ||    
T  7672065 ttttttcttataaaatgacattttctaaaatataaatatcaacaaatatctctttattccgt-aaaaataatagttaattaaaaaaaatttgaagtagga 7672163  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtag 142  Q
    |||| ||||||||||||||| ||||||||||||||    
T  7672164 gtaccggtacaccttaatttacggatgtaccgtag 7672198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 37492251 - 37492303
Alignment:
Q  99 taagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  37492251 taagcgagagtaccggtacaccgtaatttgcggatgtaccgtagaagttccca 37492303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 54262684 - 54262543
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaat-gtaagcgagag 108  Q
    ||||| |||||| ||||||||||||||||| || ||| ||||||| | |||||| |||||| |||| |||| ||||||||||| |  |   |||| ||||    
T  54262684 tttttattataacatgatattttctaaaatctaaatgccaacaaataactatttatttcat-aaaattgattgttaatttatagatttaagaagcaagag 54262586  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||  |||||||| |||||| | |||||||||||||||||||||    
T  54262585 tatcggtacaccataatttactgatgtaccgtagaagttccca 54262543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 4663190 - 4663146
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  4663190 gagtaccggtacaccttaatttgcggatgtaccgtagaagttccc 4663146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 42478959 - 42479091
Alignment:
Q  19 taaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtac 117  Q
    ||||||||| || | ||||||||| || | |||||| |  ||||| || |||||||||| || |||||||||||||| | | || | ||||||| |||||    
T  42478959 taaaatgatgttatataaaatataaatattaacaaatagttatttattacataaaaaattatcgttaatttataaaattatgaaacaagagtaccggtac 42479058  T
Q  118 accttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| |||| | |||||||||||||||||||    
T  42479059 accttattttgtgaatgtaccgtagaagttccc 42479091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 7862709 - 7862848
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||||||||||| || | ||||||||| || |  ||||| | |||||| || |||||||||| || |||||||||||||| | | ||||  ||    
T  7862709 ttttttcttataaaatgatgttgtataaaatataaatattgacaaatagctatttattacataaaaaattatcgttaatttataaaattatgaagcagga 7862808  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagtt 147  Q
    |||| ||||||||| | |||| | ||||||| ||||||||    
T  7862809 gtaccggtacacctcactttgtgaatgtaccatagaagtt 7862848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 19547753 - 19547896
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgag-a 107  Q
    |||||||||  ||||||| ||||||||||||||| || | |||||| | || ||| || |||||||||| ||| |||||||| | |  | |||   || |    
T  19547753 ttttttcttgcaaaatgacattttctaaaatataaatattaacaaatagctctttattccataaaaaataataattaatttaaagatttttaaagtagga 19547852  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    |||| |||||||||||||||| || |||||||||||||||||||    
T  19547853 gtaccggtacaccttaatttgtgggtgtaccgtagaagttccca 19547896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 39678378 - 39678457
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| || | ||||||||| || | |||||| | |||||| |||||||||||||||| ||||||||||||||    
T  39678378 ttataaaatgatgttctataaaatataaatattaacaaatagctatttatttcataaaaaatgatcgttaatttataaaa 39678457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 44379557 - 44379411
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||||| || | ||||||||| || |  ||||| |  ||||| || ||||||||||| | |||||||||||||| | | ||||  |    
T  44379557 gttttttcttatgaaatgatgttctataaaatataaatattgacaaatagttatttattacataaaaaatggtcgttaatttataaaattatgaagcagg 44379458  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccata 153  Q
    ||||| ||||||||| | |||| |  |||||||||||||||||||||    
T  44379457 agtaccggtacacctcactttgtgagtgtaccgtagaagttcccata 44379411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 29806275 - 29806415
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaat-gtaagcgagag 108  Q
    |||||||||| |||||||||||||||||||||| |||    |||| |  ||||| ||||||||||  | || ||||||||||| |  | | |||| ||||    
T  29806275 tttttcttatgaaatgatattttctaaaatataaatgctggcaaataattatttatttcataaaat-taattgttaatttatagatttaggaagcaagag 29806373  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| ||||||||| ||||||||  ||||||||||||||||||    
T  29806374 taccggtacacctcaatttgcgagtgtaccgtagaagttccc 29806415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 53516723 - 53516583
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||| |||||||||||| ||   | | |||  |||    
T  53516723 ttttttcttatgaaatgacattttctaaaatataaatatcaacaaatagctctttattccat-aaaaataatagttaatttaaaattttttaaagtaaga 53516625  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||| ||||||||||||||||| | |||||| ||||| ||||    
T  53516624 gtaccggtacaccttaatttgcaggtgtaccatagaaattcc 53516583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 37520794 - 37520702
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| |||||||||||||||| |||||||||||||| | | |||  ||||||| ||||||||| | |||| |  ||||||||||||||||||    
T  37520794 tatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccc 37520702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 44653484 - 44653584
Alignment:
Q  58 ctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttcccatattt 156  Q
    |||||| ||||||||||||| || |||||||||||||| | | ||   ||||||| ||||||||| | |||| |  ||||||||||||||||||||||||    
T  44653484 ctatttatttcataaaaaataatcgttaatttataaaattatgaaaaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttcccatattt 44653583  T
Q  157 t 157  Q
    |    
T  44653584 t 44653584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 9252122 - 9252259
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    |||||||| | |||| ||||||||||||||||   || | ||||| | |||||| ||||||||||  |||| ||||||||||| | || | |||| ||||    
T  9252122 tttttcttctgaaatcatattttctaaaatat---tgccgacaaataactatttatttcataaaat-tgatcgttaatttatagatatatgaagcaagag 9252217  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| ||||||||| ||||| ||  ||||||||||||||||||    
T  9252218 taccggtacacctcaatttacgagtgtaccgtagaagttccc 9252259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 39253033 - 39252946
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| ||||||| |||| ||||||||| || |  ||||| | |||||| || |||||||||| || ||||||||||||||    
T  39253033 gttttttcttatgaaatgatgttttataaaatataaatattgacaaatagctatttattacataaaaaataattgttaatttataaaa 39252946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 3082319 - 3082178
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||| |||| |||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||| |||||||||||| | |  | | |||   ||    
T  3082319 tttttttttatgaaatgacattttctaaaatataaatatcaacaaatagctttttattccat-aaaaataatagttaatttaaagatttttgaagtagga 3082221  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| | |||||||||||||||||||||||| ||||| |||||    
T  3082220 gtaccgatacaccttaatttgcggatgtaccatagaaattccc 3082178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 19914300 - 19914417
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    |||||||| | |||| ||||||||||||||||| ||| | ||||| | |||||| |||||| |||| |||| ||||||||||| |  | | |||| ||||    
T  19914300 tttttcttctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcat-aaaattgatcgttaatttatagatttatgaagcaagag 19914398  T
Q  109 tactggtacaccttaattt 127  Q
    ||| |||||||||||||||    
T  19914399 taccggtacaccttaattt 19914417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 21288954 - 21288813
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||| ||||||||||||||| || |||||||| | || | | || ||| |||||| |||||||||||| | |  | | |||   ||    
T  21288954 ttttttcttatgaaatgacattttctaaaatataaatatcaacaaatagctctatattccat-aaaaataatagttaatttaaagatttttgaagtagga 21288856  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| | ||||||||||||||||| |||||||||||| |||||    
T  21288855 gtaccgatacaccttaatttgcgggtgtaccgtagaaattccc 21288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 26457095 - 26457009
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||||||||| ||||||| || | ||||||||| || |  ||||| | |||||| || ||||||||||||| ||||||||||||||    
T  26457095 ttttttcttatgaaatgatgttctataaaatataaatattgacaaatagctatttattacataaaaaatgatcgttaatttataaaa 26457009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 27647745 - 27647886
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||| |||||||||||| | |  | | ||    ||    
T  27647745 ttttttcttatgaaatgacattttctaaaatataaatatcaacaaatatctctttattccat-aaaaataatagttaatttaaagatttttgaaatagga 27647843  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||   ||||||||||||||||| ||||||||||||||||||    
T  27647844 gtaccaatacaccttaatttgcgggtgtaccgtagaagttccc 27647886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 52776591 - 52776557
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||||||||||||||||||    
T  52776591 gttttttcttataaaatgatattttctaaaatata 52776557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 40478071 - 40478164
Alignment:
Q  58 ctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| || ||||||||||||| |||||||||||||| | | ||||  |||||| ||||||||| | |||| |  ||||||||||||||||||    
T  40478071 ctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 40478164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 47746092 - 47746233
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||| || |||||||||| || | ||||||||| || |  ||||| | |||||| || |||||||||| || |||||||||||||| | | |||| ||    
T  47746092 gtttttcctaataaaatgatgttctataaaatataaatattgacaaatagctatttattacataaaaaattatcgttaatttataaaattatgaagcaag 47746191  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    ||||  ||||||||| | |||| |  ||||||||||||||||    
T  47746192 agtatcggtacacctcattttgtgagtgtaccgtagaagttc 47746233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 4393249 - 4393285
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatat 45  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4393249 ttttttcttataaaatgatgttttctaaaatatatat 4393285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 29629125 - 29628986
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| |||||| ||||| ||||||||| || |||||||| | || ||| || || ||||||| |||||||||||| | |  | | |||   |    
T  29629125 gttttttcttatgaaatgacattttttaaaatataaatatcaacaaatagctctttattcca-aaaaaataatagttaatttaaagagttttgaagtagg 29629027  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagtt 147  Q
    ||||| | |||||||||||||| ||||||| ||||||||||    
T  29629026 agtaccgatacaccttaatttgtggatgtatcgtagaagtt 29628986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 32717915 - 32717983
Alignment:
Q  7 agttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    |||||||||||||  ||||| ||||||||||||||| || |||||||| | || ||| |||||||||||    
T  32717915 agttttttcttatgtaatgacattttctaaaatataaatatcaacaaataactttttatttcataaaaa 32717983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 37127946 - 37127807
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| |||| || || | ||||||||| || | || ||| |  ||||| || ||||||||||||| |||||||||||||| | | |||| ||    
T  37127946 gttttttcttatgaaataatgttctataaaatataaatattaaaaaatagttatttattacataaaaaatgatcgttaatttataaaattatgaagc-ag 37127848  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagtt 147  Q
    ||||||||||||||| | |||  |  |||||||||||||||    
T  37127847 agtactggtacacctcattttatgagtgtaccgtagaagtt 37127807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 41282673 - 41282586
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| | ||||| || | ||||||||| || |  ||||| | |||||| || ||||||||||||| ||||||||||||||    
T  41282673 gttttttcttatgagatgatgttctataaaatataaattttgacaaataactatttattacataaaaaatgattgttaatttataaaa 41282586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 51344636 - 51344778
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| | ||||| || | ||||||||| || |  ||||| | |||||| || ||||||||||||| ||||| |||||||| | | ||||  |    
T  51344636 gttttttcttatgagatgatgttctataaaatataaattttgacaaatagctatttattacataaaaaatgatcgttaa-ttataaaattatgaagcagg 51344734  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||||| ||||    ||||||||||||||||||    
T  51344735 agtaccggtacaccttactttgtaagtgtaccgtagaagttccc 51344778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 542628 - 542662
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  542628 gttttttcttataaaataatattttctaaaatata 542662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 7347356 - 7347437
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  |||||||| |||||||||||    
T  7347356 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaaatgatcgttaatttata 7347437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 15298353 - 15298319
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  15298353 gttttttcttataaaatgatgttttctaaaatata 15298319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 23796043 - 23796124
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||| | |||||||||||||||||||| ||| | ||||| |  ||||| |||||| |||| |||| |||||||||||    
T  23796043 tttttcttatgacatgatattttctaaaatataaatgccgacaaataattatttatttcat-aaaattgatcgttaatttata 23796124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 54831087 - 54831121
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  54831087 gttttttcttataaaataatattttctaaaatata 54831121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 3136527 - 3136607
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    ||||||| ||| |||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||| ||||||||||||    
T  3136527 ttttttcctatgaaatgacattttctaaaatataaatatcaacaaatagctctttattccat-aaaaataatagttaattta 3136607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 41982248 - 41982389
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||| | |||| ||||||||| || |  ||||| | |||||| || |||||||||| || || ||||||||||| | | |||  ||    
T  41982248 gttttttcttatgaaatgttgttttataaaatataaatattgacaaataactatttattacataaaaaattatcgtcaatttataaaattataaagtaag 41982347  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    ||||| | ||||||| | |||| |  ||||||||||||||||    
T  41982348 agtaccgatacacctcactttgtgagtgtaccgtagaagttc 41982389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 43744366 - 43744333
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||| |||||||||||||||||    
T  43744366 ttttttcttataaaataatattttctaaaatata 43744333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 54009172 - 54009256
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||| |||| ||||||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| ||||||||||||||    
T  54009172 tttttcttatgaaataatattttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaaa 54009256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 54788579 - 54788692
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||| |||| |||||||  ||| |||||||||  |||  ||||| | |||||| || ||||||||||||| |||||||||| ||| | | ||||  ||    
T  54788579 tttttttttatgaaatgatgctttataaaatataactgttgacaaagagctatttattacataaaaaatgatcgttaatttattaaattataaagcagga 54788678  T
Q  108 gtactggtacacct 121  Q
    ||||||||||||||    
T  54788679 gtactggtacacct 54788692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 788517 - 788473
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| ||||||||||||||||||| ||||||||| || |||||    
T  788517 gagtaccggtacaccttaatttgcgggtgtaccgtaaaaattccc 788473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 7157179 - 7157147
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  7157179 tttttcttatgaaatgatattttctaaaatata 7157147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 13451562 - 13451530
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaata 40  Q
    ||||||||||||||||| |||||||||||||||    
T  13451562 gttttttcttataaaataatattttctaaaata 13451530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 25592048 - 25592012
Alignment:
Q  114 gtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  25592048 gtacaccttaatttacgggtgtaccgtagaagttccc 25592012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 35320501 - 35320418
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  35320501 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaagtgattgttaatttataaa 35320418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 45927486 - 45927569
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| |||||||||||| ||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  45927486 tttttcttatgaaatgatattttttaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 45927569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 47243948 - 47243980
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaata 40  Q
    ||||||||||||||||| |||||||||||||||    
T  47243948 gttttttcttataaaataatattttctaaaata 47243980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 50465738 - 50465821
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  50465738 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 50465821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 52024578 - 52024514
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||| | |||| ||||||||||||||||| ||| | ||||| | |||||| ||||||||||    
T  52024578 tttttcttctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcataaaa 52024514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 53186270 - 53186330
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat 70  Q
    |||||||||| ||||||| |||||||||||||| || | |||||| |||| ||| ||||||    
T  53186270 tttttcttatgaaatgatgttttctaaaatataaatattaacaaatacctttttatttcat 53186330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 218; Significance: 1e-119; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 174 - 433
Target Start/End: Original strand, 13992443 - 13992701
Alignment:
Q  174 actacaaatcaactattaagatctgacattcaaacctgaccatnnnnnnntttaaatgtcaaactaatttatatcttatatccgatagggtacagccccc 273  Q
    ||||||||||||||||||||||||| | |||||| | ||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13992443 actacaaatcaactattaagatctggcgttcaaatccgaccataaaaaa-tttaaatgtcaaactaatttatatcttatatccgatagggtacagccccc 13992541  T
Q  274 cattaactcaatttaaaataagtgccgaaattctttgagaatcaaatccgacaactagagagtctttgatttcatatcaatgccacttgtggctacaaaa 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13992542 cattaactcaatttaaaataagtgccgaaattctttgagaatcaaatccgacaactagagagtctttgatttcatatcaatgccacttgtggctacaaaa 13992641  T
Q  374 tttttgccactctgtttcattaggccttttttcttcaaaatttgtgtcttttgtcatagc 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13992642 tttttgccactctgtttcattaggccttttttcttcaaaatttgtgtcttttgtcatagc 13992701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 37499006 - 37499149
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37499006 gttttttcttataaaataatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 37499105  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||    
T  37499106 gtaccggtacaccttaatttgcgggtgtaccatagaagttccca 37499149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 28494036 - 28494167
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgagagt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28494036 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcaagagt 28494135  T
Q  110 actggtacaccttaatttgcggatgtaccgta 141  Q
    || ||||||||||||||||||| |||||||||    
T  28494136 accggtacaccttaatttgcgggtgtaccgta 28494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 6520129 - 6519982
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  6520129 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcgag 6520030  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccatatt 155  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  6520029 agtaccggtacaccttaatttgcgg-tgtaccgtagaagttcccttatt 6519982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 23056966 - 23057107
Alignment:
Q  11 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagag 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23056966 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagag 23057065  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
     || ||||||||||||||||||| ||||||||||||||||||    
T  23057066 gaccggtacaccttaatttgcgggtgtaccgtagaagttccc 23057107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 23061267 - 23061408
Alignment:
Q  11 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagag 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  23061267 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgataattaatttataaaaattgtaagcgagag 23061366  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| ||||||||||||||||||| ||||||||||||||||||    
T  23061367 taccggtacaccttaatttgcgggtgtaccgtagaagttccc 23061408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 51369580 - 51369725
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||    
T  51369580 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaataatagttaatttataaaaattgtaagcga 51369679  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    |||||| ||||||||||||||||| | ||||||||| |||||||||    
T  51369680 gagtaccggtacaccttaatttgcaggtgtaccgtaaaagttccca 51369725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 52303276 - 52303424
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattt-ctttcataaaaaatgatagttaatttataaaaatgtaagcgag 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  52303276 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaatgtaagtgag 52303375  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccatattt 156  Q
    ||||| ||||||||||||||||||| |||||  ||||| ||| |||||||    
T  52303376 agtaccggtacaccttaatttgcgg-tgtactttagaaattctcatattt 52303424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 5956667 - 5956526
Alignment:
Q  11 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagag 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  5956667 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattataagcgagag 5956568  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| |||||| ||||||||| || ||||||||||||||||||    
T  5956567 taccggtacagcttaatttgtgggtgtaccgtagaagttccc 5956526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 18642133 - 18642271
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  18642133 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctatttttttcataaaaaatgatagttaatttataaaaattgtaagcgaga 18642232  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||| |||||||| |||||| ||| |||||| |||||||    
T  18642233 gtaccggtacaccgtaatttacgggtgtaccatagaagt 18642271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 35305422 - 35305558
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  35305422 ttataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccg 35305521  T
Q  114 gtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||||||||||| ||  ||||||||||||||||||    
T  35305522 gtacaccttaatttacgagtgtaccgtagaagttccc 35305558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 8461670 - 8461528
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| |||||| |||    
T  8461670 gttttttcttataaaataatattttctaaaatatatatgtcaacaaacaccaattttcttcataaaaaatgatagttaatttataaaaattgtaagtgag 8461571  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    ||||| |||||||| |||||||||| |||||| ||||||||||    
T  8461570 agtaccggtacaccgtaatttgcgggtgtaccatagaagttcc 8461528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 51985199 - 51985341
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||| ||| |||||||||||||||||| |||||||||||    
T  51985199 ttttttcttataaaatgatattttctaaaatatatttgtcaacaaacacctattttcttcataaagaattatagttaatttataaaaattgtaagcgaga 51985298  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| |||||||| |||||||| | ||||||||||||||||||    
T  51985299 gtaccggtacaccgtaatttgcaggtgtaccgtagaagttccc 51985341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 45423879 - 45424024
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  45423879 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgaga 45423978  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccata 153  Q
    |||| |||||| | |||||| ||| |||||| ||||||| ||||||    
T  45423979 gtaccggtacatcgtaatttacgggtgtaccatagaagtccccata 45424024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 39971411 - 39971273
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  39971411 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaaaacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgaga 39971312  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||| |||||||| |||||| ||| |||||| |||||||    
T  39971311 gtaccggtacaccgtaatttacgggtgtaccatagaagt 39971273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 921977 - 921842
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacacctattt-ctttcataaaaaatgatagttaatttataaaaat-gtaagcgagagtactg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||| ||||||||| |    
T  921977 ttataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaa-cgagagtaccg 921879  T
Q  114 gtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||||||||||||| | |||||| |||||||||||    
T  921878 gtacaccttaatttgcaggtgtaccatagaagttccc 921842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 23459680 - 23459553
Alignment:
Q  20 aaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggtaca 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  23459680 aaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattataagcgagagtactggtaca 23459581  T
Q  119 ccttaatttgcggatgtaccgtagaagt 146  Q
    || |||||| ||| |||||| |||||||    
T  23459580 ccgtaatttacgggtgtaccatagaagt 23459553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 39190705 - 39190567
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||    
T  39190705 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattataagcgaga 39190606  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||| |||||||| |||||| | | |||||| |||||||    
T  39190605 gtaccggtacaccgtaatttactggtgtaccatagaagt 39190567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 45673581 - 45673719
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||    
T  45673581 ttttttcatataaaataatattttctaaaatatatttgtcaacaaacacctattttcttcataaaaaatgatagttaacttataaaaattgtaagcgaga 45673680  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||| |||||||| |||||| |||||||||| |||||||    
T  45673681 gtaccggtacaccgtaatttacggatgtaccatagaagt 45673719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 46770873 - 46770737
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||| ||||    
T  46770873 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagtgaga 46770774  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||| |||| ||| |||||| ||| |||||| |||||    
T  46770773 gtaccggtagaccgtaatttacgggtgtaccatagaa 46770737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 51520078 - 51520216
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| || ||| ||||    
T  51520078 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgaaagtgaga 51520177  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||| ||||| || |||||| ||| |||||| |||||||    
T  51520178 gtaccggtaccccgtaatttacgggtgtaccatagaagt 51520216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 38262276 - 38262140
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||| ||||||||||    
T  38262276 gttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgataattaatttataaaaattgtaagcgag 38262177  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    ||||| | |||||| |||| | ||| |||||| |||||    
T  38262176 agtac-gatacaccgtaatctacgggtgtaccatagaa 38262140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 50905842 - 50905962
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| |||||||||||||| ||||||||||    
T  50905842 gtttttttatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaattatatttaatttataaaaattgtaagcgag 50905941  T
Q  107 agtactggtacaccttaattt 127  Q
    ||||| |||||||| ||||||    
T  50905942 agtaccggtacaccgtaattt 50905962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 26102616 - 26102474
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaat-gtaagcgag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||||||||||||||||||| ||||  |||    
T  26102616 gttttttcttataaaatgatattttctaaaatatatatgtcaagaaacacctattttcttcataaaaaattatagttaatttataaaaatcgtaaatgag 26102517  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    | ||  |||||||| ||||||   | |||||||||||||||||    
T  26102516 aatatcggtacaccgtaatttagaggtgtaccgtagaagttcc 26102474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 43306805 - 43306915
Alignment:
Q  17 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggt 115  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||| |||||||||||||||||| ||||| ||||||||| |||    
T  43306805 tataaaatgatattttctaaaatatatatgtcaacaaacgcctattttcttcat-aaaaattatagttaatttataaaaattgtaaacgagagtaccggt 43306903  T
Q  116 acaccttaattt 127  Q
    ||||| ||||||    
T  43306904 acaccgtaattt 43306915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 16482841 - 16482926
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  16482841 ttttttcttataaaatgatattttctaaa-tctatatgtcaacaaacacctattttcttcataaaaaattatagttaatttataaaa 16482926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 50239418 - 50239277
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||| ||||||||| || |||| ||| |  | ||| ||||||||||| ||||||||||||||||||  | | |||  |||    
T  50239418 ttttttcttatgaaatgatattttttaaaatataaatatcaataaatatttttttatttcataaaaa-tgatagttaatttataaatttttgaagtaaga 50239320  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  50239319 gtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 50239277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 29106503 - 29106408
Alignment:
Q  12 tttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    |||| |||||||||||||||||||||||||| || ||||||||||| |||||  |||||||||||| |||||||||||||||||| |||||||||||    
T  29106503 tttcatataaaatgatattttctaaaatatacatatcaacaaacacatattttcttcataaaaaat-atagttaatttataaaaattgtaagcgaga 29106408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 154
Target Start/End: Original strand, 7122221 - 7122365
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    ||||| ||||||||||||||||||||||||| |  | |||||||| | || ||| |||||| |||||||||||||||||||||||  | | |||  ||||    
T  7122221 ttttttttataaaatgatattttctaaaatacaagtatcaacaaataactttttatttcat-aaaaatgatagttaatttataaatttttgaagtaagag 7122319  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttcccatat 154  Q
    ||| ||||||| |||| ||| || ||||| ||||||||||||||||    
T  7122320 taccggtacactttaaattgtgggtgtactgtagaagttcccatat 7122365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 26011083 - 26010943
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||||||||||||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||| |||||||||||| |    | | |||   ||    
T  26011083 ttttttcttataaaatgacattttctaaaatataaatatcaacaaatagctctttattccat-aaaaataatagttaatttaaagttttttgaagtagga 26010985  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  26010984 gtaccggtacaccttaatttgcgggtgtaccgtagaagttcc 26010943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 12105303 - 12105160
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    ||||||||| |||||||||| || | ||||||||| || |  ||||| | |||||| || |||||||||| || |||||||||||||| | | |||| ||    
T  12105303 gttttttctgataaaatgatgttctataaaatataaatattgacaaataactatttattacataaaaaattatcgttaatttataaaattatgaagcaag 12105204  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||| | |||| |  ||||||||||||||||||    
T  12105203 agtaccggtacacctcattttgtgagtgtaccgtagaagttccc 12105160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 52345742 - 52345599
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| |||||||||| | ||||||||| ||||  | ||| |  ||||| ||||| |||||||||| |||||||||||||| | | || | ||    
T  52345742 gttttttcttatgaaatgatattctataaaatataaatgttgataaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaaacaag 52345643  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||| | |||| |  ||||||||||||||||||    
T  52345642 agtaccggtacacctcactttgtgagtgtaccgtagaagttccc 52345599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 23304673 - 23304756
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    ||||||||||| |||||||||||||||||||||| || |||||||| | || ||| |||||| |||||| ||||||||||||||||    
T  23304673 ttttttcttattaaatgatattttctaaaatataaatatcaacaaatagct-tttatttcat-aaaaataatagttaatttataaa 23304756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 33909955 - 33910099
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||||||||||||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||  |||||||||||| | |  | | |||   ||    
T  33909955 ttttttcttataaaatgacattttctaaaatataaatatcaacaaatagctctttattccat-aaaaacaatagttaatttaaagatttttgaagtagga 33910053  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccata 153  Q
    |||| |||||||||||||||| || |||||||||||| ||||||||    
T  33910054 gtaccggtacaccttaatttgtgggtgtaccgtagaaattcccata 33910099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 2247322 - 2247449
Alignment:
Q  21 aaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacac 119  Q
    |||||||||||||||||||| | || |||||||| | || ||| |||||| |||||||||||||||| |||| |  | | |||  | ||||| |||||||    
T  2247322 aaatgatattttctaaaatacaaatatcaacaaatagctctttatttcat-aaaaatgatagttaatatatagatttttaaagttaaagtaccggtacac 2247420  T
Q  120 cttaatttgcggatgtaccgtagaagttc 148  Q
    ||||||||| || ||||||||||||||||    
T  2247421 cttaatttgtgggtgtaccgtagaagttc 2247449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 12178863 - 12179006
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaat-gtaagcgag 106  Q
    ||||||| |||| |||| ||||||||||||||||| |||||  |||| | |||||| |||||| |||| | || ||||||||||| |  | | |||| ||    
T  12178863 gtttttttttatgaaataatattttctaaaatataaatgtcggcaaataactatttatttcat-aaaattaatcgttaatttatagatttaggaagcaag 12178961  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||| ||||||||| ||||||||  ||||||||| |||||||||    
T  12178962 agtaccggtacacctcaatttgcgagtgtaccgtaaaagttccca 12179006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 25702578 - 25702434
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||||| || | ||||||||| ||||  ||||| |  ||||| ||| | |||||||||| ||| |||||||||| | | |||| ||    
T  25702578 gttttttcttatgaaatgatgttctataaaatataaatgttgacaaatagttatttattttacaaaaaatgatcgttgatttataaaattatgaagcaag 25702479  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||| ||||||||| |||||  |  |||||||||||||||||||    
T  25702478 agtaccggtacacctcaatttatgagtgtaccgtagaagttccca 25702434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 48796295 - 48796359
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||| | |||||| ||||||||||    
T  48796295 tttttcttatgaaatgatattttctaaaatataaatgtcgacaaataactatttatttcataaaa 48796359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 11444413 - 11444346
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||||| | |||||| || ||||||||    
T  11444413 gttttttcttataaaataatattttctaaaatataaaagtcaacaaatatctatttattacataaaaa 11444346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 42275478 - 42275391
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| ||||||| || | ||||||||  || | |||||| | |||||| |||||||||||||||| ||||||||||||||    
T  42275478 gttttttcttatgaaatgatgttctataaaatattaatattaacaaataactatttatttcataaaaaatgatcgttaatttataaaa 42275391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 51610678 - 51610534
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatata--tgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||| | |||| |||||||||||||||||||  || | ||||| | |||||| ||||||||||  |||| |||| ||||||||  | | |||| ||    
T  51610678 tttttcttctgaaatcatattttctaaaatatataaatgccgacaaataactatttatttcataaaat-tgattgttagtttataaatttatgaagcaag 51610580  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    ||||| | ||||||| ||||| || |||||||||||||||||||||    
T  51610579 agtaccgatacacctcaatttacgaatgtaccgtagaagttcccat 51610534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 51978000 - 51977859
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| |||||| |||| |||||||||| |  |||||||| | || ||| || |||||||| | |||||||||||| | |  | | |||   |    
T  51978000 gttttttcttatgaaatgacatttcctaaaatataaacatcaacaaataactctttattccataaaaa-taatagttaatttaaagatttttgaagtagg 51977902  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  51977901 agtaccggtacaccttaatttgcgggtgtaccgtagaagttcc 51977859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 10179013 - 10178933
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    ||||||||| | |||||||||||||||||||||| || |||||||| |||| ||| || ||| |||||| ||||||||||||    
T  10179013 ttttttcttgtgaaatgatattttctaaaatataaatatcaacaaatacctctttattccat-aaaaataatagttaattta 10178933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 34038276 - 34038163
Alignment:
Q  36 aaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatg 134  Q
    ||||||| || | |||||| | |||||| |||||||||||||||| |||||||||||||| | | ||||  |||||| ||||||||| | |||| |  ||    
T  34038276 aaatataaatattaacaaataactatttatttcataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtg 34038177  T
Q  135 taccgtagaagttc 148  Q
    ||||||||||||||    
T  34038176 taccgtagaagttc 34038163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 24511862 - 24511985
Alignment:
Q  27 tattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaat 125  Q
    |||||||||||||||| ||| ||||||| | |||||| |||||| |||| |||| |||| ||||||||  | | |||| ||||||| ||||||||| |||    
T  24511862 tattttctaaaatataaatgccaacaaataactatttatttcat-aaaattgatcgttagtttataaatttatgaagcaagagtaccggtacacctcaat 24511960  T
Q  126 ttgcggatgtaccgtagaagttccc 150  Q
    || ||  |||||||||||| |||||    
T  24511961 ttacgagtgtaccgtagaaattccc 24511985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 6329391 - 6329304
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| ||||||| || | ||||||||| || |  ||||| | |||||| || ||||||||||||| ||||||||||||||    
T  6329391 gttttttcttatgaaatgatgttctataaaatataaatattgacaaatagctatttattacataaaaaatgatcgttaatttataaaa 6329304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 30547876 - 30548014
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    |||||||| | |||| ||||||||||||||||| ||||| ||||| | |||||| |||||| |||| |||| |||| |||||| |  | | |||| ||||    
T  30547876 tttttcttctgaaatcatattttctaaaatataaatgtcgacaaataactatttatttcat-aaaattgatcgttagtttatagatttatgaagcaagag 30547974  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    |||  |||||||| ||||| ||  ||||||||||||||||    
T  30547975 tacctgtacacctcaatttacgagtgtaccgtagaagttc 30548014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 35910428 - 35910570
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||||||||||||||| ||||||||||||||| || |||||||| | || ||| ||  || |||||| |||||||||||| | |  | | |||   ||    
T  35910428 ttttttcttataaaatgacattttctaaaatataaatatcaacaaataactctttattctat-aaaaataatagttaatttaaagatttttgaagtagga 35910526  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    |||| | ||||| ||||||| ||| |||||||||||||||||||    
T  35910527 gtaccgatacactttaatttacgggtgtaccgtagaagttccca 35910570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 38261067 - 38261209
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| | |||||||| | ||||||||| ||||  ||||| | |||||| || ||||||||||||| ||||| |||||||| | | ||||  |    
T  38261067 gttttttcttatgagatgatattctataaaatataaatgttgacaaatagctatttattacataaaaaatgatcgttaa-ttataaaattatgaagcagg 38261165  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||| | |||  |  ||||||||||||||||||    
T  38261166 agtaccggtacacctcactttatgagtgtaccgtagaagttccc 38261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 632789 - 632640
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||| |||||||||||| ||   | | |||    |    
T  632789 ttttttcttatgaaatgacattttctaaaatataaatatcaacaaataactctttattccat-aaaaataatagttaatttaaaattttttgaagtagaa 632691  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccatatttta 158  Q
    |||  ||| ||||||||||||||| ||| ||||||||||||||| ||||||    
T  632690 gtatcggttcaccttaatttgcgggtgtgccgtagaagttcccaaatttta 632640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 52441219 - 52441133
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||||||||| ||||||| || | ||||||||| || |  ||||| | |||||| || ||||||||||||| ||||||||||||||    
T  52441219 ttttttcttatgaaatgatgttctataaaatataaatattgacaaataactatttattacataaaaaatgatcgttaatttataaaa 52441133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 51184333 - 51184445
Alignment:
Q  38 atatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgta 136  Q
    |||||||| |||||||| | || ||| |||||||||| |||||||||||||||||||  | | |||  ||||||| || ||||||||| ||| || ||||    
T  51184333 atatatatatcaacaaataactttttatttcataaaa-atgatagttaatttataaatttttgaagtaagagtaccggcacaccttaaattgtgggtgta 51184431  T
Q  137 ccgtagaagttccc 150  Q
    || |||||||||||    
T  51184432 ccatagaagttccc 51184445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 29171431 - 29171514
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || | |||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  29171431 tttttcttatgaaatgatgttttctaaaatataaatattaacaaatacctttttatttcat-taaagtgatcgttaatttataaa 29171514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 34100853 - 34100789
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||| | |||| ||||||||||||||||| ||||| ||||| | |||||| ||||||||||    
T  34100853 tttttcttctgaaatcatattttctaaaatataaatgtcgacaaataactatttatttcataaaa 34100789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 45427268 - 45427200
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaa 76  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||| | || ||| || |||||||||    
T  45427268 gttttttcttatgaaataatattttctaaaatataaaagtcaacaaatatctctttattacataaaaaa 45427200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 50502485 - 50502402
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || | ||||||||||| ||| ||| ||  ||| |||| |||||||||||||    
T  50502485 tttttcttatgaaatgatgttttctaaaatataaatattaacaaacacctttttattttat-taaagtgatcgttaatttataaa 50502402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 7227713 - 7227626
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| ||||||| || | ||||||||| || |  | ||| |  ||||| |||||||||||||||| ||||||||||||||    
T  7227713 gttttttcttatgaaatgatgttctataaaatataaatattgataaatagttatttatttcataaaaaatgatcgttaatttataaaa 7227626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 27353111 - 27353193
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||||||||| ||||||||||||||| | || |||| ||| | || ||| ||| || |||||| ||||||||||||||    
T  27353111 ttttttcttataaaattatattttctaaaatacaaatatcaataaatagctctttattttat-aaaaataatagttaatttata 27353193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 10635386 - 10635305
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||||||||||| |||||||||||||| || | |||||| | || ||| ||||||  ||| |||| |||||||||||    
T  10635386 tttttcttataaaatgatgttttctaaaatataaatattaacaaatatctttttatttcat-taaagtgatcgttaatttata 10635305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 21073029 - 21073115
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||||||||| |||| || || | ||||||||| || | || ||| | |||||| || ||||||||||||| ||||||||||||||    
T  21073029 ttttttcttatgaaataatgttctataaaatataaatattaaaaaatagctatttattacataaaaaatgatcgttaatttataaaa 21073115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 22667407 - 22667373
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  22667407 gttttttcttataaaataatattttctaaaatata 22667373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 26423983 - 26423949
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  26423983 gttttttcttataaaatgatgttttctaaaatata 26423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 26921818 - 26921772
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaa 54  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||    
T  26921818 gttttttcttatgaaataatattttctaaaatataaaagtcaacaaa 26921772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 28712040 - 28712006
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  28712040 gttttttcttataaaataatattttctaaaatata 28712006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 28791509 - 28791463
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaa 54  Q
    ||||||| ||||||||||| ||||||||||||||| || ||||||||    
T  28791509 gtttttttttataaaatgacattttctaaaatataaatatcaacaaa 28791463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 477535 - 477498
Alignment:
Q  58 ctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  477535 ctatttatttcataaaaaatgatcgttaatttataaaa 477498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 11778765 - 11778693
Alignment:
Q  21 aaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||||| ||||||| | || ||||| || | || ||| ||||||||||| ||||||||||||||||||    
T  11778765 aaatgatattttttaaaataaaaatatcaacgaataactttttatttcataaaaa-tgatagttaatttataaa 11778693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 18992615 - 18992699
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||| |||| |||||||||||||||||||||| ||  || |||| | ||  || ||| || |||||||||||||||||||||||    
T  18992615 ttttttgttatgaaatgatattttctaaaatataaataccagcaaataactccttattttat-aaaaatgatagttaatttataaa 18992699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 32912351 - 32912210
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||| ||||| ||||||| |||||||||||||| ||||  ||||| | |||||| |||| |  |||||||| |||||||||||||  | | ||| ||||    
T  32912351 tttttccttatgaaatgatgttttctaaaatata-atgttgacaaatagctatttatttctt--aaaatgatcgttaatttataaatttatgaagtgaga 32912255  T
Q  108 gtactggtacaccttaatttgcg-gatgtaccgtagaagttccca 151  Q
    |||| | ||||||| |||||| | | ||||| |||||||||||||    
T  32912254 gtaccgatacacctcaatttgtgaggtgtactgtagaagttccca 32912210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 33098846 - 33098706
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcga-ga 107  Q
    ||||||||||| ||||||  |||||||||||||| || |||||||| |  | ||| || |||||||| | |||||||||||| | |  | |||   | ||    
T  33098846 ttttttcttatgaaatgactttttctaaaatataaatatcaacaaatagttctttattccataaaaa-taatagttaatttaaagatttttaaagtatga 33098748  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
     ||||| |||||||||||||| || |||||||||||||||||    
T  33098747 atactgatacaccttaatttgtgggtgtaccgtagaagttcc 33098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 50
Target Start/End: Complemental strand, 35242436 - 35242407
Alignment:
Q  21 aaatgatattttctaaaatatatatgtcaa 50  Q
    ||||||||||||||||||||||||||||||    
T  35242436 aaatgatattttctaaaatatatatgtcaa 35242407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 46362115 - 46362022
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaaat-gtaagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||| |||||||||||||||| |||||||||||||| |   ||   || |||| ||||||||| | |||| | ||||||||||||||||||||    
T  46362115 tatttatttcataaaaaatgatcgttaatttataaaattacgaaaaaagggtaccggtacacctcattttgtgaatgtaccgtagaagttccca 46362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 52261078 - 52261123
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaa 54  Q
    ||||||||||| |||||| ||||||||||||||| || ||||||||    
T  52261078 ttttttcttatgaaatgacattttctaaaatataaatatcaacaaa 52261123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 2620940 - 2620984
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaa 54  Q
    ||||||||||||||| | ||||||||||||||| || ||||||||    
T  2620940 tttttcttataaaataaaattttctaaaatataaatatcaacaaa 2620984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 17553908 - 17553872
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  17553908 tatttatttcataaaaaatgatcgttaatttataaaa 17553872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 24245622 - 24245590
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  24245622 tttttcttatgaaatgatattttctaaaatata 24245590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 45809711 - 45809775
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    ||||| ||||||||||||| ||||||| ||||| ||| | ||||| | |||||| ||||||||||    
T  45809711 tttttattataaaatgatactttctaagatataaatgccgacaaataactatttatttcataaaa 45809775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 48481115 - 48481198
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  48481115 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 48481198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 9e-74; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 42711193 - 42711337
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42711193 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 42711292  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  42711293 gtaccggtacaccttaatttgcggatgtaccgtagaagttcccat 42711337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 41913238 - 41913096
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41913238 gttttttcttataaaataatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 41913139  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| ||||||||||||||||||| |||||| |||||||||||    
T  41913138 gtaccggtacaccttaatttgcgggtgtaccatagaagttccc 41913096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 40942139 - 40942282
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat-aaaaaatgatagttaatttataaaaatgtaagcgag 106  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40942139 gttttttcttataaaatgatattttttaaaatatatatgtcaacaaacacctatttctttcataaaaaaatgatagttaatttataaaaatgtaagcgag 40942238  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| |||||| |||||||| |||||||||| |||||||||||    
T  40942239 agtaccggtacatcttaatttacggatgtaccatagaagttccc 40942282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 21699435 - 21699292
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataa-aaaatgatagttaatttataaaaatgtaagcgag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  21699435 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaaatgataattaatttataaaaatgtaaacgag 21699336  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||  ||||||||||||||||||  |||||| ||||| |||||    
T  21699335 agtatcggtacaccttaatttgcgagtgtaccatagaaattccc 21699292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 28327339 - 28327473
Alignment:
Q  18 ataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggt 115  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| || |||    
T  28327339 ataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagaggaccggt 28327438  T
Q  116 acaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| |||||||||||| ||||||||||||||||||    
T  28327439 acagcttaatttgcgggtgtaccgtagaagttccc 28327473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 30863057 - 30863195
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  30863057 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgaga 30863156  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||| |||||||| |||||| ||| |||||  |||||||    
T  30863157 gtaccggtacaccgtaatttacgggtgtacaatagaagt 30863195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 3910193 - 3910314
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcga 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  3910193 gttttttcttataaaataatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcga 3910292  T
Q  106 gagtactggtacaccttaattt 127  Q
    |||||| |||||||||| ||||    
T  3910293 gagtaccggtacacctttattt 3910314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 30623862 - 30623718
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||||||||||| |||||||||||    
T  30623862 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacttattttctttataaaaaatgatagttaatttataaaaattgtaagcgaga 30623763  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    |||  |||||||| ||||||  || |||||| ||||||| |||||    
T  30623762 gtatcggtacaccgtaatttatgggtgtaccatagaagtccccat 30623718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 38129527 - 38129389
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||||| |||    
T  38129527 ttttttcatataaaatgatgttttctaaaatatatatgtcaacaaacacttattttcttcataaaaaatgatagttaatttataaaaattgtaagcaaga 38129428  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
     ||| |||||||| |||||| ||| |||||| |||||||    
T  38129427 ataccggtacaccgtaatttacgggtgtaccatagaagt 38129389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 1691133 - 1690989
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||  ||||    
T  1691133 ttttttcttataaaatgatattttctaaaatatat--gtcaacaaacacctattttcttcataaaaaatgatagttaatttaaaaaaattgtaaatgaga 1691036  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccatat 154  Q
    |||| |||| ||| |||||| ||| ||||| ||||||||| ||||||    
T  1691035 gtaccggtataccataatttacgggtgtacggtagaagtttccatat 1690989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 41381771 - 41381886
Alignment:
Q  34 taaaatatatatgtcaacaaacacctattt-ctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggtacaccttaatttgcgg 131  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||| ||| ||| ||||||| |||    
T  41381771 taaaatatatatgtcaacaaagacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcaaaagtaccggtgcacattaatttacgg 41381870  T
Q  132 atgtaccgtagaagtt 147  Q
     |||||||||||||||    
T  41381871 gtgtaccgtagaagtt 41381886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 30936235 - 30936094
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||||||||||||| || |||||||| | || ||| |||||| |||| ||||||||||||||||||  | | |||  |||    
T  30936235 ttttttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttcat-aaaattgatagttaatttataaatttttgaagtaaga 30936137  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  30936136 gtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 30936094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 27956591 - 27956692
Alignment:
Q  52 aaacacctattt-ctttcataaaaaatgatagttaatttataaaaat-gtaagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||||||||||| |||| | ||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  27956591 aaacacctattttcttttacaaaaaatgatagttaatttataaaatttgtaagcgagagtaccggtacaccttaatttgcgggtgtaccatagaagttcc 27956690  T
Q  150 ca 151  Q
    ||    
T  27956691 ca 27956692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 8770512 - 8770366
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    ||||||||||||  ||||||||||||||||||| | || |||||||||| || ||| ||||||| |||||||||||||||||||| |  | | |||| ||    
T  8770512 gttttttcttatgtaatgatattttctaaaatacaaatatcaacaaacaactctttatttcata-aaaatgatagttaatttatagatttttgaagcaag 8770414  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccatat 154  Q
    ||||  ||||||||||||||||||| ||||||||| ||| ||||||||    
T  8770413 agtatcggtacaccttaatttgcgggtgtaccgtataagatcccatat 8770366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 45857617 - 45857475
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| |||||||||||||||||||||| || |||||||| | || ||| |||||| |||| | ||||||||||||||||  | | |||  ||    
T  45857617 gttttttcttattaaatgatattttctaaaatataaatatcaacaaatagctttttatttcat-aaaagtaatagttaatttataaatttttgaagtaag 45857519  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||    
T  45857518 agtaccggtacaccttaatttgcgggtgtaccgtaaaagttccc 45857475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 44963962 - 44963822
Alignment:
Q  11 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagt 109  Q
    |||| ||||||||||||||||||||||||| | || |||||||| | || ||| ||||||| ||||||||||||||||||||||  | | |||  |||||    
T  44963962 tttttttataaaatgatattttctaaaatacaaatatcaacaaataactttttatttcata-aaaatgatagttaatttataaatttttgaagtaagagt 44963864  T
Q  110 actggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    || |||||||||||| ||| || |||||| ||||||||||||    
T  44963863 accggtacaccttaaattgtgggtgtaccatagaagttccca 44963822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 45458829 - 45458884
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattt 63  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45458829 gttttatcttataaaatgatattttctaaaatatatatgtcaacaaacacctattt 45458884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 45461660 - 45461737
Alignment:
Q  78 gatagttaatttataaaaat-gtaagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttcccatat 154  Q
    ||||||||| |||||||||| |||||||||||||| |||||||| |||||||| | |||||||||||||||| |||||    
T  45461660 gatagttaaattataaaaattgtaagcgagagtaccggtacaccgtaatttgcaggtgtaccgtagaagttctcatat 45461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 42975160 - 42975301
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||||||||||||| || |||||||| |  | ||| |||||| |||||| ||||||||||||||||  | | |||  | |    
T  42975160 ttttttcttatgaaatgatattttctaaaatataaatatcaacaaatagttttttatttcat-aaaaataatagttaatttataaatttttgaagtaaaa 42975258  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
     ||  ||||||||||||||| |||||||||  |||||||||||    
T  42975259 atatcggtacaccttaatttacggatgtacaatagaagttccc 42975301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 11486259 - 11486342
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||||| |||||||||||||||||||| | || |||| ||| | || ||| |||||||||||| |||||||||||||||    
T  11486259 gttttttcttatgaaatgatattttctaaaatacaaatatcaataaatagctctttatttcataaaaaa-gatagttaatttata 11486342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 20438957 - 20438822
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||||||||||||||| ||||| ||||||||| || |||||||| | || ||| || ||| |||||| |||||||||||| | |  | | |||   ||    
T  20438957 ttttttcttataaaatgacattttttaaaatataaatatcaacaaatagctctttattccat-aaaaataatagttaatttaaagatttttgaagtagga 20438859  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  20438858 gtaccggtacaccttaatttgcgggtgtaccgtagaa 20438822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 18990450 - 18990494
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||    
T  18990450 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 18990494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 26605199 - 26605056
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    ||||||||| |||||||||| || | ||||||||| || |  | ||| | |||||| ||  ||||||||| || |||||||||||||| | | |||| ||    
T  26605199 gttttttctgataaaatgatgttctataaaatataaatattgataaataactatttattatataaaaaattatcgttaatttataaaattatgaagcaag 26605100  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||| | |||| |  ||||||||||||||||||    
T  26605099 agtaccggtacacctcattttgtgagtgtaccgtagaagttccc 26605056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 43750339 - 43750481
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| |||||| ||||||||||||||| || |||| ||| | || ||| || ||| |||||| |||||||||||| | |  | | |||   |    
T  43750339 gttttttcttatgaaatgacattttctaaaatataaatatcaataaatagctctttattccat-aaaaataatagttaatttaaagatttttgaagtagg 43750437  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||||||||||| | ||| ||||||||||||||    
T  43750438 agtaccggtacaccttaatttgcaggtgtcccgtagaagttccc 43750481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 23561371 - 23561452
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||| |||||||||||||||||||||  ||| | ||||| | |||||| |||||| |||| |||| |||||||||||    
T  23561371 tttttcttatgaaatgatattttctaaaatatcaatgcctacaaataactatttatttcat-aaaattgatcgttaatttata 23561452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 34118735 - 34118876
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||| ||||||||||||||| || |||||||| | |  ||| || |||||||| | |||||||||||| |    | | ||   |||    
T  34118735 ttttttcttatgaaatgacattttctaaaatataaatatcaacaaatagcactttattccataaaaa-taatagttaatttaaatttttttgaaataaga 34118833  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||  |||||||||||||||||| ||||||||||||||||||    
T  34118834 gtaccagtacaccttaatttgcgggtgtaccgtagaagttccc 34118876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 41046980 - 41046894
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||||||||| ||||||| || | ||||||||| || | |||||| | |||||| | ||||||||||| || ||||||||||||||    
T  41046980 ttttttcttatgaaatgatgttctataaaatataaatattaacaaataactatttatatcataaaaaattatcgttaatttataaaa 41046894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 41809466 - 41809546
Alignment:
Q  11 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||| |||| |||||||||||||||||||||| || |||||||| |  | ||| |||||| |||| ||||||||||||||||    
T  41809466 tttttttatgaaatgatattttctaaaatataaatatcaacaaataattctttatttcat-aaaattgatagttaatttata 41809546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 43631195 - 43631055
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    |||||||| | |||| ||||||||||||||||| ||||| ||||| | |||||| |||||| |||| |||| |||| |||||| |  | | |||| ||||    
T  43631195 tttttcttctgaaatcatattttctaaaatataaatgtcgacaaataactatttatttcat-aaaattgatcgttagtttatagatttatgaagcaagag 43631097  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| ||||||||| ||| | ||  |||||| |||||||||||    
T  43631096 taccggtacacctcaatctacgagtgtaccatagaagttccc 43631055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 15090934 - 15091017
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || | |||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  15090934 tttttcttatgaaatgatgttttctaaaatataaatattaacaaatacctttttatttcat-taaagtgatcgttaatttataaa 15091017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 16087086 - 16087022
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||| | |||| ||||||||||||||||| ||||| ||||| | |||||| ||||||||||    
T  16087086 tttttcttctgaaatcatattttctaaaatataaatgtcgacaaataactatttatttcataaaa 16087022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 40379111 - 40379079
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||||||||||||||||    
T  40379111 tttttcttataaaatgatattttctaaaatata 40379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 24203131 - 24203198
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||| | || ||| || ||||||||    
T  24203131 gttttttcttatgaaataatattttctaaaatataaaagtcaacaaatatctctttattacataaaaa 24203198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 31482637 - 31482719
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    ||||||||||| |||||||||||||||||||| | || |||  ||| | || ||| |||||| |||||| ||||||||||||||    
T  31482637 ttttttcttatgaaatgatattttctaaaatacaaatatcatgaaatagctctttatttcat-aaaaataatagttaatttata 31482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 35291418 - 35291327
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    ||||| ||||||||||||| || |||||||||||||| | | |||  ||||||| ||||||||| | |||| |  |||||||||||||||||    
T  35291418 tatttatttcataaaaaataatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttcc 35291327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 48900654 - 48900587
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    ||||||||||||||||| ||||||| ||||||||| | ||||||||| | || ||| || ||||||||    
T  48900654 gttttttcttataaaataatattttttaaaatataaaagtcaacaaatatctctttattacataaaaa 48900587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 1343285 - 1343319
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  1343285 gttttttcttataaaatgatgttttctaaaatata 1343319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 3214785 - 3214871
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||||||||| |||| || || | ||||||||| || |  ||||| | |||||| || ||||||||||||| ||||||||||||||    
T  3214785 ttttttcttatgaaataatgttctataaaatataaatattgacaaatagctatttattacataaaaaatgatcgttaatttataaaa 3214871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 8578064 - 8577982
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    ||||||||||| |||||||||||| ||||||||| || |  ||||| |||||||| |||  || |||||||| |||||||||||||    
T  8578064 ttttttcttatgaaatgatattttttaaaatata-atattgacaaatacctatttattt--tataaaatgatcgttaatttataaa 8577982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 43069341 - 43069387
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaa 54  Q
    |||||||||||| |||||||||||||||||||| | || ||||||||    
T  43069341 gttttttcttatgaaatgatattttctaaaatacaaatatcaacaaa 43069387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 27276042 - 27276075
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||| |||||||||||||||||    
T  27276042 ttttttcttataaaataatattttctaaaatata 27276075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 523800 - 523832
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||| |||||||||||||||||    
T  523800 tttttcttataaaataatattttctaaaatata 523832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 2291046 - 2291110
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||||| |||| ||||||||||||||||| ||  | ||||| | |||||| ||||||||||    
T  2291046 tttttcttatgaaataatattttctaaaatataaataccgacaaataactatttatttcataaaa 2291110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 15954587 - 15954667
Alignment:
Q  71 aaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||||||| |||||||||||||| | | |||  ||||||| ||||||||| | |||| |  ||||||||||||||||||    
T  15954587 aaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccc 15954667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 32529272 - 32529236
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  32529272 tatttatttcataaaaaatgatcgttaatttataaaa 32529236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 37504651 - 37504615
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  37504651 tatttatttcataaaaaatgatcgttaatttataaaa 37504615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 3e-70; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 34332375 - 34332517
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34332375 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 34332474  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  34332475 gtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 34332517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 28090454 - 28090602
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28090454 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacatctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 28090553  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccatattt 156  Q
    |||| |||||||||||| |||||| |||||||||||||||||| |||||    
T  28090554 gtaccggtacaccttaaattgcgggtgtaccgtagaagttcccttattt 28090602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 29773708 - 29773850
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29773708 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaaa 29773807  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| |||||||||||| |||||| ||||||||||||||||||    
T  29773808 gtaccggtacaccttaaattgcgggtgtaccgtagaagttccc 29773850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 44935162 - 44935304
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44935162 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaaccgaga 44935261  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| |||||||||||| |||||| ||||||||||||||||||    
T  44935262 gtaccggtacaccttaaattgcgggtgtaccgtagaagttccc 44935304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 39171224 - 39171103
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39171224 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttcttttataaaaaatgatagttaatttataaaaatgtaagcgaga 39171125  T
Q  108 gtactggtacaccttaatttgc 129  Q
    ||||||||||||||||||||||    
T  39171124 gtactggtacaccttaatttgc 39171103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 29459897 - 29460041
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  29459897 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcga 29459996  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||    
T  29459997 gagtaccggtacaccttaatttgcaggtgtaccgtagaagttccc 29460041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 23286828 - 23286970
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa-aatgatagttaatttataaaaatgtaagcgag 106  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23286828 gttttttcttataaaatgatattttctaaaatatatatttcaataaacacttatttctttcataaaaaaatgatagttaatttataaaaatgtaagcgag 23286927  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  23286928 agtaccggtacaccttaatttgcgggtgtaccgtagaagttcc 23286970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 37511359 - 37511495
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacacctattt-ctttcataaaaaatgatagttaatttataaaaat-gtaagcgagagtactg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||| |    
T  37511359 ttataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttaataaaaaatgatagttaatttataaaaattgtaagcgagagtaccg 37511458  T
Q  114 gtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||||||||||| ||||||||||||||||||||||    
T  37511459 gtacaccttaatttacggatgtaccgtagaagttccc 37511495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 15726032 - 15725890
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||    
T  15726032 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaattatagttaatttataaaaattgtaagcgaga 15725933  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||  |||||||| |||||||| | ||||||||||||||||||    
T  15725932 gtatcggtacaccgtaatttgcaggtgtaccgtagaagttccc 15725890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 946232 - 946377
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat--aaaaaatgatagttaatttataaaaa-tgtaagcg 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||  |||||||||||||||||||||||||| |||||| |    
T  946232 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacttattttcttcataaaaaaaatgatagttaatttataaaaattgtaagtg 946331  T
Q  105 agagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||    
T  946332 agagtaccggtacaccgtaatttgcgggtgtaccgtagaagttccc 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 23274887 - 23275031
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||    
T  23274887 ttttttcttataaaatgatattttctaaaatgcatatgtcaaaaaacacctattttcttcataaaaaataatagttaatttataaaaattgtaagcgaga 23274986  T
Q  108 gta-ctggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||| | ||||||||||||||||||| |||| ||||||||||||||    
T  23274987 gtacccggtacaccttaatttgcgggtgtatcgtagaagttccca 23275031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 37161772 - 37161920
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| | |||||||||    
T  37161772 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaattatagttaatttataaaaattataagcgaga 37161871  T
Q  108 ------gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
          ||||||||||||| |||||| |||||||||| |||||||||||    
T  37161872 gtactggtactggtacaccgtaatttacggatgtaccatagaagttccc 37161920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 14498446 - 14498310
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||| ||||    
T  14498446 ttttttcatataaaataatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagtgaga 14498347  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||| |||| ||| |||||| ||| |||||| |||||    
T  14498346 gtaccggtagaccgtaatttacgggtgtaccatagaa 14498310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 39171103 - 39170998
Alignment:
Q  48 caacaaacacctatttctttcataaaaaatgatagt---taatttataaaaatgtaagcgagagtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  39171103 caacaaacacctatttctttcataaaaaatgatagtagttaatttataaaaatgtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaa 39171004  T
Q  145 gttccc 150  Q
    ||||||    
T  39171003 gttccc 39170998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 12163084 - 12162938
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat-aaaaaatgatagttaatttataaaaa-tgtaagcga 105  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | ||| |||||||||||||||||||||||||| |||||| ||    
T  12163084 gttttttcttataaaatgatattttctaaaatatatctgtcaacaaacacctattttctacataaaaaaatgatagttaatttataaaaattgtaagtga 12162985  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    |||||| |||||||  |||||||||| | ||||||| ||||| ||||    
T  12162984 gagtaccggtacactgtaatttgcgggtataccgtataagtttccat 12162938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 12407512 - 12407366
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat-aaaaaatgatagttaatttataaaaa-tgtaagcga 105  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | ||| |||||||||||||||||||||||||| |||||| ||    
T  12407512 gttttttcttataaaatgatattttctaaaatatatctgtcaacaaacacctattttctacataaaaaaatgatagttaatttataaaaattgtaagtga 12407413  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    |||||| |||||||  |||||||||| | ||||||| ||||| ||||    
T  12407412 gagtaccggtacactgtaatttgcgggtataccgtataagtttccat 12407366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 29229318 - 29229176
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaa-tgatagttaatttataaaaa-tgtaagcgag 106  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||| |||    
T  29229318 tttttttttatacaatgatattt-ctaaaatatatatgtcaacaaacacctattttcttcataaaaaagtgatagttaatttataaaaattgtaagtgag 29229220  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| |||||||| |||||| ||| ||||||||||||| ||||    
T  29229219 agtaccggtacaccgtaatttacgggtgtaccgtagaagatccc 29229176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 36002623 - 36002761
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||| |||||    
T  36002623 ttttttcatataaaatgatattttctaaaatagatatgtcaacaaacacctattttcttcataaaaaataatagttaatttataaaaattgtaaacgaga 36002722  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    ||||||   |||| |||||| | |||||||| |||||||    
T  36002723 gtactgaagcaccgtaatttacagatgtaccatagaagt 36002761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 38502463 - 38502592
Alignment:
Q  17 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||||||||| ||| | |    
T  38502463 tataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcat-aaaaatgatagttaatttataaaaattgtaagcgagaataccgat 38502561  T
Q  116 acaccttaatttgcggatgtaccgtagaagt 146  Q
    ||||| |||||| ||| |||||| |||||||    
T  38502562 acaccgtaatttacgggtgtaccatagaagt 38502592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 10280824 - 10280960
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||| | ||| |||||    
T  10280824 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgataattaatttataaaaattataaacgaga 10280923  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||| | |||||| |||||  ||| |||||| |||||    
T  10280924 gtaccgatacaccgtaattcacgggtgtaccatagaa 10280960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 17642338 - 17642479
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||||||||||||| || |||||||| | || ||| |||||| |||||||||||||||||||||||  | | |||  |||    
T  17642338 ttttttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttcat-aaaaatgatagttaatttataaatttttgaagtaaga 17642436  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  17642437 gtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 17642479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 2273274 - 2273412
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||||||||||||||||||||||||||||| | || |||||||| | || ||| |||||| |||||||| ||||||||||||||  | | |||  |||    
T  2273274 ttttttcttataaaatgatattttctaaaatacaaatatcaacaaatagctttttatttcat-aaaaatgacagttaatttataaatttttgaagtaaga 2273372  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagtt 147  Q
    |||| ||||||||||||||||| | |||||||||||||||    
T  2273373 gtaccggtacaccttaatttgcaggtgtaccgtagaagtt 2273412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 43049801 - 43049941
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    ||||| ||||||||||||||||||||||||||| || |||||||| | || ||| |||||| |||||| |||||||||||||| |  | | |||  ||||    
T  43049801 ttttttttataaaatgatattttctaaaatataaatatcaacaaatagctctttatttcat-aaaaataatagttaatttatagatttttgaagtaagag 43049899  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    || |||||||||||||||| ||||||||||||| | ||||||    
T  43049900 tattggtacaccttaatttacggatgtaccgtaaacgttccc 43049941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 23275078 - 23275173
Alignment:
Q  33 ctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagta-ctggtacaccttaatt 126  Q
    |||||||  ||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  23275078 ctaaaatgcatatgtcaaaaaacacctattttcttcataaaaaataatagttaatttataaaaattgtaagcgagagtacccggtacaccttaatt 23275173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 39029580 - 39029719
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| |||| ||||||||||||||||| || |||||||||| || ||| |||||| || ||| | | |||||||||| || | | |||  ||    
T  39029580 gttttttcttatgaaataatattttctaaaatataaatatcaacaaacaactctttatttcat-aataataacaattaatttatagaattttgaagtaag 39029678  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagtt 147  Q
    | ||||||||||| ||||||||| |||||||||||||||||    
T  39029679 aatactggtacactttaatttgcagatgtaccgtagaagtt 39029719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 31158820 - 31158960
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaat-gtaagcgagag 108  Q
    |||||||||| |||||||||||| ||||||||| ||| |  |||| | |||||| ||||||||||  | || ||||||||||| |  | | |||| ||||    
T  31158820 tttttcttatgaaatgatattttttaaaatataaatgccggcaaataactatttatttcataaaat-taatcgttaatttatagatttaggaagcaagag 31158918  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||| ||||||||  ||||||||||||||||||    
T  31158919 tactgatacacctcaatttgcgagtgtaccgtagaagttccc 31158960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 29454286 - 29454142
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    ||||||||||||  |||||| || | ||||||||| || |  ||||| |  ||||| || ||||||||||||| |||||||||||||| | | ||||  |    
T  29454286 gttttttcttatgcaatgatgttctataaaatataaatattgacaaatagttatttattacataaaaaatgatcgttaatttataaaattatgaagcagg 29454187  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||| ||||||||||| |||| |  |||||||||||||||||||    
T  29454186 agtaccggtacaccttactttgtgagtgtaccgtagaagttccca 29454142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 10706697 - 10706555
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| ||||||| || | ||||||||| ||||  | ||| |  ||||| ||||| |||||||||| |||||||||||||| | | |||| |||    
T  10706697 ttttttcttatgaaatgatgttctataaaatataaatgttgataaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaagcaaga 10706598  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||  |||||||| | |||| |  ||||||||||||||||||    
T  10706597 gtaccagtacacctcactttgtgagtgtaccgtagaagttccc 10706555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 29265731 - 29265587
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||| |  ||||||||| | ||||||||| ||||  | ||| |  ||||| |||||||||||||||| |||||||||||||| | | || | |||    
T  29265731 ttttttcttgtggaatgatattctataaaatataaatgttgataaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaaacaaga 29265632  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    |||| ||||||||| | |||| |  ||||| ||||||||||||||    
T  29265631 gtaccggtacacctcactttgtgagtgtacagtagaagttcccat 29265587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 144
Target Start/End: Complemental strand, 36886303 - 36886168
Alignment:
Q  10 tttttcttataaaatgatattttct-aaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||||||| ||||||| | |||||||| || |||||||| | || ||| ||||| |||||||||||||||||||||| |  | | ||   |||    
T  36886303 tttttcttataaaataatatttttttaaaatataaatatcaacaaatagctctttatttca-aaaaaatgatagttaatttatatatttttaaattaaga 36886205  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||| |||||| |||| |||||||||||| |||||||    
T  36886204 gtaccggtacatcttattttgcggatgtatcgtagaa 36886168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 39300226 - 39300086
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| |||||||||| | ||||||||| ||||  | ||| |  ||||| ||||| ||||||||||  ||||||||||||| | | |||| ||    
T  39300226 gttttttcttatgaaatgatattctttaaaatataaatgttgataaatagttatttatttcacaaaaaatgatcattaatttataaaattatgaagcaag 39300127  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagtt 147  Q
    ||||| ||||||||| | |||| |  ||||||||| |||||    
T  39300126 agtaccggtacacctcattttgtgagtgtaccgtaaaagtt 39300086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 43921398 - 43921477
Alignment:
Q  12 tttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||| |||||||||||||||||||| | || |||||||| | || ||| |||||| |||||||||||||||| ||||    
T  43921398 tttcttatgaaatgatattttctaaaatacaaatatcaacaaatagctctttatttcat-aaaaatgatagttaatgtata 43921477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 36162456 - 36162543
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| |||||||||| | ||||||||| ||||  | ||| |  ||||| ||||| |||||||||| ||||||||||||||    
T  36162456 gttttttcttatgaaatgatattctataaaatataaatgttgataaatagttatttatttcacaaaaaatgatcgttaatttataaaa 36162543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 529535 - 529580
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaa 54  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||    
T  529535 ttttttcttataaaatgacattttctaaaatataaatatcaacaaa 529580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 16323823 - 16323903
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    ||||||||||| |||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||| ||||||||||||    
T  16323823 ttttttcttatgaaatgacattttctaaaatataaatatcaacaaatagctctttattccat-aaaaataatagttaattta 16323903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 26439664 - 26439584
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    ||||||||||| |||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||| ||||||||||||    
T  26439664 ttttttcttatgaaatgacattttctaaaatataaatatcaacaaatagctctttattccat-aaaaataatagttaattta 26439584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 43485094 - 43485053
Alignment:
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  43485094 agtaccggtacaccttaatttgcgggtgtaccgtagaagttc 43485053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 2732145 - 2732189
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||    
T  2732145 gagtacaggtacaccttaatttgcggatgtaccgaagaaattccc 2732189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 26439553 - 26439509
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| | |||||||||||||| |||||||||||||||||||||    
T  26439553 gagtaccgatacaccttaatttgtggatgtaccgtagaagttccc 26439509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 3642938 - 3643005
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||| | || ||| || ||||||||    
T  3642938 gttttttcttatgaaataatattttctaaaatataaaagtcaacaaatatctctttattacataaaaa 3643005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 19725310 - 19725377
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||| | || ||| || ||||||||    
T  19725310 gttttttcttatgaaataatattttctaaaatataaaagtcaacaaatatctctttattacataaaaa 19725377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 37466054 - 37466089
Alignment:
Q  115 tacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37466054 tacaccttaatttgcggttgtaccgtagaagttccc 37466089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 38329543 - 38329452
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||||||| ||| ||||||||| |||||||||||||| | | |||||||||||| |||| | || | |||| |  |||||||||||||||||    
T  38329543 tatttcttacatgaaaaatgatcgttaatttataaaattataaagcgagagtaccggtatatctcactttgtgagtgtaccgtagaagttcc 38329452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 42444369 - 42444299
Alignment:
Q  21 aaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||||||||||||| | || |||||||| | || ||| ||||||| ||||||||||||||| ||||    
T  42444369 aaatgatattttctaaaatacaaatatcaacaaatagctctttatttcata-aaaatgatagttaatatata 42444299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 2732056 - 2732106
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacct 59  Q
    ||||||||| | |||||||||||||||||||||| || |||||||| ||||    
T  2732056 ttttttcttgtgaaatgatattttctaaaatataaatatcaacaaatacct 2732106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 12180185 - 12180231
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaa 54  Q
    |||||||||||| |||||||| ||||||||||||| ||| |||||||    
T  12180185 gttttttcttatgaaatgatactttctaaaatataaatgccaacaaa 12180231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 12424613 - 12424659
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaa 54  Q
    |||||||||||| |||||||| ||||||||||||| ||| |||||||    
T  12424613 gttttttcttatgaaatgatactttctaaaatataaatgccaacaaa 12424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 16871707 - 16871673
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  16871707 gttttttcttataaaataatattttctaaaatata 16871673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 27970276 - 27970310
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  27970276 gttttttcttataaaatgatgttttctaaaatata 27970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 36274704 - 36274623
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||| ||||  |||||||||||||||| ||||| || || | |||||| |||||| |||| |||| |||||||||||    
T  36274704 tttttcttatgaaatcttattttctaaaatataaatgtcgacgaataactatttatttcat-aaaattgatcgttaatttata 36274623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 39347274 - 39347193
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    ||||||||| || |||||| |||| |||||||||| || |||||||| | || ||| ||||||| ||||| ||||||||||||    
T  39347274 gttttttctaatgaaatgacatttcctaaaatataaatatcaacaaatagctctttatttcata-aaaataatagttaattta 39347193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 42165049 - 42165015
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  42165049 gttttttcttataaaatgatgttttctaaaatata 42165015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 17792470 - 17792610
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaat-gtaagcgagag 108  Q
    |||||||||| |||||||||||||| | ||||| ||| | ||||| | |||||| |||||| |||| |||| |||||| ||||||  | | ||||  |||    
T  17792470 tttttcttatgaaatgatattttctgagatataaatgccgacaaataactatttatttcat-aaaattgattgttaatgtataaatttaggaagcaggag 17792568  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| | |||||||||||||  |  |||||| |||||||||||    
T  17792569 taccgatacaccttaatttatgagtgtaccatagaagttccc 17792610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 24247699 - 24247732
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||| |||||||||||||||||    
T  24247699 ttttttcttataaaataatattttctaaaatata 24247732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 32238205 - 32238284
Alignment:
Q  13 ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    ||||||| |||||||||||| ||||||||| | ||| ||||| | || ||| |||||| ||||||||| |||||||||||||    
T  32238205 ttcttatgaaatgatattttttaaaatataaaagtcgacaaataact-tttatttcat-aaaaatgatcgttaatttataaa 32238284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 34634167 - 34634204
Alignment:
Q  58 ctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  34634167 ctatttatttcataaaaaatgatcgttaatttataaaa 34634204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 196207 - 196147
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat 70  Q
    |||||||||| ||||||| |||||||||||||| || | |||||| |||| ||| ||||||    
T  196207 tttttcttatgaaatgatgttttctaaaatataaatattaacaaatacctttttatttcat 196147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 311044 - 310984
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat 70  Q
    |||||||||| ||||||| |||||||||||||| || | |||||| |||| ||| ||||||    
T  311044 tttttcttatgaaatgatgttttctaaaatataaatattaacaaatacctttttatttcat 310984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 12266212 - 12266129
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  12266212 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 12266129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 24937725 - 24937661
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||||| |||||||||||||| | ||||| ||| | ||||| | |||||| ||||||||||    
T  24937725 tttttcttatgaaatgatattttctgagatataaatgccgacaaataactatttatttcataaaa 24937661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 27172180 - 27172244
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||||| |||||||||||||| | ||||| ||| | ||||| | |||||| ||||||||||    
T  27172180 tttttcttatgaaatgatattttctgagatataaatgccgacaaataactatttatttcataaaa 27172244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 45401414 - 45401446
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||| ||||||||||||||    
T  45401414 tttttcttataaaatgatgttttctaaaatata 45401446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 5e-69; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 1353771 - 1353911
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgagag 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1353771 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaattatagttaatttataaaaatgtaagcgagag 1353870  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  1353871 tactggtacaccttaatttgcgggtgtaccgtagaagttcc 1353911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 34665835 - 34665976
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgagag 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34665835 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaataatagttaatttataaaaatgtaagcgagag 34665934  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| ||||||||||||||||||| ||||||||||||||||||    
T  34665935 taccggtacaccttaatttgcgggtgtaccgtagaagttccc 34665976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 5389344 - 5389202
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5389344 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacatatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 5389245  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    || | ||||||||||||||||||| ||||||||||||||||||    
T  5389244 gtgccggtacaccttaatttgcgggtgtaccgtagaagttccc 5389202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 11227890 - 11228031
Alignment:
Q  8 gttttttcttataaaatgatatt-ttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgag 106  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11227890 gttttttcttataaaataatattattctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgag 11227989  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    ||||||| ||||||||||||||| | ||||||||||||||||    
T  11227990 agtactgatacaccttaatttgcaggtgtaccgtagaagttc 11228031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 37083476 - 37083617
Alignment:
Q  11 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagag 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37083476 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagag 37083575  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| | ||||||||||||||||||||||||||||||||||||    
T  37083576 taccgatacaccttaatttgcggatgtaccgtagaagttccc 37083617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 4673745 - 4673601
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  4673745 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcga 4673646  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| ||||||||||||||||| | |||||| |||||||||||    
T  4673645 gagtaccggtacaccttaatttgcaggtgtaccttagaagttccc 4673601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 38963211 - 38963068
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat--aaaaaatgatagttaatttataaaaatgtaagcga 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  38963211 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttcttttataaaaaaaatgatagttaatttataaaaatgtaagcga 38963112  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||||| ||| ||||||||||||| | |||| ||||||||||||    
T  38963111 gagtaccggtgcaccttaatttgcaggtgtaacgtagaagttcc 38963068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 3383335 - 3383189
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataa-aaaatgatagttaatttataaaaa-tgtaagcga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||| |||||| ||    
T  3383335 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaaatgatagttaatttataaaaattgtaagtga 3383236  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||||    
T  3383235 gagtaccggtacaccgtaatttacggatgtaccgtagaagttcccat 3383189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 11813335 - 11813198
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  11813335 tttttttttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcgag 11813236  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    ||||| |||||||||||||||| || ||||||||||||    
T  11813235 agtaccggtacaccttaatttgtgggtgtaccgtagaa 11813198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 15771452 - 15771314
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||||||||||| | ||||||||    
T  15771452 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacttattttctttataaaaaatgatagttaatttataaaaattataagcgag 15771353  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaag 145  Q
    ||||| ||||||||||||||| ||| |||||||||||||    
T  15771352 agtaccggtacaccttaatttacgggtgtaccgtagaag 15771314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 33423176 - 33423034
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  33423176 ttttttcttataaaatgatattttttaaaatatatatgtcaacaaacagctatttttttcattaaaaatgatagttaatttataaaaattgtaagcgaga 33423077  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| |||||||| |||||||||||||||  ||| ||||||||    
T  33423076 gtaccggtacaccgtaatttgcggatgtatagtaaaagttccc 33423034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 14532967 - 14532824
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||||| ||||||||||    
T  14532967 gttttatcttataaaatgatattttctaaaatatatatgttaacaaacacctattttcttcataaaaaatgatagttaaattataaaaattgtaagcgag 14532868  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||  | |||||| |||||||||| ||||||||||||||||||    
T  14532867 agtatcgatacaccgtaatttgcgggtgtaccgtagaagttccc 14532824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 6884422 - 6884571
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgt--caacaaacacctattt-ctttcataaaaaatgatagttaatttataaaaat-gtaagc 103  Q
    ||||||||||||||||||||||||||| |||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  6884422 gttttttcttataaaatgatattttcttaaatatatatatatcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagc 6884521  T
Q  104 gagagtactggtacaccttaatttgcggatgtaccgtagaagttcccata 153  Q
    |||||||| ||||||||||||||| |  |||||||||| |||||||||||    
T  6884522 gagagtaccggtacaccttaatttacaaatgtaccgtaaaagttcccata 6884571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 59182 - 59326
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||    
T  59182 ttttttcttataaaattatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaattatagttaatttataaaaattgtaagcgaga 59281  T
Q  108 gtactggtaca-ccttaatttgcggatgtaccgtagaagttccca 151  Q
    |||| |||||| | | ||||||| | |||||||||||||||||||    
T  59282 gtaccggtacatcataaatttgcaggtgtaccgtagaagttccca 59326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 42427702 - 42427566
Alignment:
Q  17 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||  |||    
T  42427702 tataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcaagagtatcggt 42427603  T
Q  116 acaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    ||||| |||||| ||| |||||| ||||||| |||||    
T  42427602 acaccgtaatttacgggtgtaccatagaagtccccat 42427566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 3810585 - 3810452
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactgg 114  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| ||||||||| ||||| ||    
T  3810585 ttataaaatgatattttctaaaatatatatgtcaaaaaacacctattttcttcataaaaaataatagttaatttataaaaattgtaagcgaaagtaccgg 3810486  T
Q  115 tacaccttaatttgcggatgtaccgtagaagttc 148  Q
    |||||||||||||| || |||  |||||||||||    
T  3810485 tacaccttaatttgtgggtgtgtcgtagaagttc 3810452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 6438313 - 6438164
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||||||||||||| || |||||||| | || ||| ||||||| ||||| ||||||||||||||||  | | ||   |||    
T  6438313 ttttttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttcata-aaaattatagttaatttataaatttttgaattaaga 6438215  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccatatttta 158  Q
    |||| || |||||||||||| ||||| |||||||||||||||| |||||||    
T  6438214 gtaccggcacaccttaatttacggatttaccgtagaagttcccttatttta 6438164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 12547632 - 12547759
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||||||||||||| || |||| ||| | || ||| |||||| |||||| ||||||||||||||||  | | |||  |||    
T  12547632 ttttttcttatgaaatgatattttctaaaatataaatatcaataaatagctttttatttcat-aaaaataatagttaatttataaatttttgaagtaaga 12547730  T
Q  108 gtactggtacaccttaatttgcggatgta 136  Q
    ||||| |||||||||||||||||| ||||    
T  12547731 gtactcgtacaccttaatttgcgggtgta 12547759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 6513403 - 6513262
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||| |||||||||||| |    | | |||   ||    
T  6513403 ttttttcttatgaaatgacattttctaaaatataaatatcaacaaatagctctttattccat-aaaaataatagttaatttaaatttttttaaagtagga 6513305  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| ||||||||||||||| | ||||||||||||||||||||    
T  6513304 gtaccggtacaccttaatttacagatgtaccgtagaagttccc 6513262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 1580390 - 1580241
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||||| || | ||||||||| || |  ||||| | |||||| || |||||||||| || ||||||| |||||| | | |||| ||    
T  1580390 gttttttcttatgaaatgatgttctataaaatataaatattgacaaatagctatttattacataaaaaattatcgttaattcataaaattatgaagcaag 1580291  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccatattt 156  Q
    ||||| ||||||||| | |||| |  |||||||||||| ||||| |||||    
T  1580290 agtaccggtacacctcactttgtgagtgtaccgtagaaattcccttattt 1580241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 151
Target Start/End: Complemental strand, 45690632 - 45690498
Alignment:
Q  17 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgta-agcgagagtactggt 115  Q
    |||||||||||||||||||||||||| || |  || || | || ||| ||||||||||  ||||  ||||||||||||  | || ||||||||||| |||    
T  45690632 tataaaatgatattttctaaaatataaatattgactaatagctttttatttcataaaa--tgatccttaatttataaatttatagagcgagagtaccggt 45690535  T
Q  116 acaccttaatttgcg-gatgtaccgtagaagttccca 151  Q
    |||||| |||||| | | |||||||||||||||||||    
T  45690534 acacctcaatttgtgaggtgtaccgtagaagttccca 45690498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 37909720 - 37909763
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  37909720 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttcc 37909763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 25332488 - 25332454
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||||||||||||||||||    
T  25332488 gttttttcttataaaatgatattttctaaaatata 25332454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 30981149 - 30981295
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaac-acctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    ||||||||||| ||||||| || | ||||||||| || | ||||||  | |||||| ||||||||||||||||  ||||||||||||| | | ||||| |    
T  30981149 ttttttcttatgaaatgatgttctataaaatataaatattaacaaaatagctatttatttcataaaaaatgatcattaatttataaaattatgaagcggg 30981248  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccata 153  Q
    ||||| | ||||||| | |||| |  ||||||||| || ||||||||    
T  30981249 agtaccgatacacctcactttgtgagtgtaccgtaaaaattcccata 30981295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 33494199 - 33494345
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa--aatgtaagcgag 106  Q
    ||||||||||| |||||||||||||||||||||| ||| | ||||| | || ||| | |||| |||| |||| |||||||||||||  || | |||| ||    
T  33494199 ttttttcttatgaaatgatattttctaaaatataaatgccgacaaataactctttatatcat-aaaattgatcgttaatttataaattaaag-aagcaag 33494296  T
Q  107 agtactggtac--accttaatttgcggatgtaccgtagaagttcccata 153  Q
    ||||| | |||  |||| ||||| ||  |||||||||||||||||||||    
T  33494297 agtaccgatacatacctcaatttacgagtgtaccgtagaagttcccata 33494345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 42640990 - 42640908
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    ||||||||||| ||||||| |||||||||||||| || |  ||||| |||||||| ||||||  |||||||| |||||||||||||    
T  42640990 ttttttcttatgaaatgatgttttctaaaatata-atattgacaaatacctatttatttcat--aaaatgatcgttaatttataaa 42640908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 26738298 - 26738381
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  |||||||| |||||||||||||    
T  26738298 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaaatgatcgttaatttataaa 26738381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 5155836 - 5155769
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||| | || ||| || ||||||||    
T  5155836 gttttttcttatgaaataatattttctaaaatataaaagtcaacaaatatctctttattacataaaaa 5155769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 27400993 - 27401080
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| ||||| | || | ||||||||| || |  ||||| |  ||||| |||||||||||||||| ||||||||||||||    
T  27400993 gttttttcttatgaaatggtgttctataaaatataaatatttacaaataattatttatttcataaaaaatgatcgttaatttataaaa 27401080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 39620457 - 39620544
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| |||| || || | ||||||||| || | || ||| | |||||| || ||||||||||||| ||||||||||||||    
T  39620457 gttttttcttatgaaataatgttctataaaatataaatattaaaaaatagctatttgttacataaaaaatgatcgttaatttataaaa 39620544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 2640181 - 2640215
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  2640181 gttttttcttataaaataatattttctaaaatata 2640215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 3261220 - 3261312
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaa--atgtaagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||||| ||| ||||||||| |||||||| |||||  ||| |||||||||||| |||||| || | |||  | |||||||||||||||||||    
T  3261220 tatttcttacatgaaaaatgatcgttaatttgtaaaatcatg-aagcgagagtaccggtacatctcactttatgaatgtaccgtagaagttccc 3261312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 12071419 - 12071453
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  12071419 gttttttcttataaaatgatgttttctaaaatata 12071453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 15426166 - 15426132
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  15426166 gttttttcttataaaatgatgttttctaaaatata 15426132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 16637170 - 16637105
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    ||||||||||||||| |||||||||| |||||||| ||| ||||||| | || ||| ||||||||||    
T  16637170 gttttttcttataaa-tgatattttcaaaaatataaatgccaacaaataactctttatttcataaaa 16637105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 25712860 - 25712826
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  25712860 gttttttcttataaaatgatgttttctaaaatata 25712826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 34438329 - 34438248
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    ||||||| |||| |||||| ||||||||||||||| || |||||||| | || ||| || ||| |||||| ||||||||||||    
T  34438329 gtttttttttatgaaatgacattttctaaaatataaatatcaacaaatagctctttattccat-aaaaataatagttaattta 34438248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 43690162 - 43690021
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    ||||||||||||||| | ||||||||||||||| || |||||||| | || ||| || ||| |||||| || ||||||||| |    | | ||| | |||    
T  43690162 tttttcttataaaataaaattttctaaaatataaatatcaacaaatagctctttattccat-aaaaataattgttaatttaaatttttttgaagtgggag 43690064  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    |||   ||||||||||||||||| |||| ||||||||||||||    
T  43690063 taccaatacaccttaatttgcgggtgtatcgtagaagttccca 43690021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 8362542 - 8362509
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||||| ||||||||||||||    
T  8362542 ttttttcttataaaatgatgttttctaaaatata 8362509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 20212294 - 20212214
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    ||||||||||| ||||||  |||||||||||||| || |||||||| | || ||| || ||| |||||| ||||||||||||    
T  20212294 ttttttcttatgaaatgacgttttctaaaatataaatatcaacaaatagctctttattccat-aaaaataatagttaattta 20212214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 28181431 - 28181398
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatata 42  Q
    |||||| |||||||||||||||||||||||||||    
T  28181431 tttttttttataaaatgatattttctaaaatata 28181398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 31928399 - 31928338
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttca 69  Q
    ||||||||||||||||||||||||| || ||||||||  || ||||| | |||||| |||||    
T  31928399 gttttttcttataaaatgatattttatataatatataaatcgacaaatagctatttatttca 31928338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 40370737 - 40370802
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    |||||||||| |||||| ||||||||||||||| || |||||||| | || ||| || ||||||||    
T  40370737 tttttcttatgaaatgacattttctaaaatataaatatcaacaaataactctttattccataaaaa 40370802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 5084980 - 5084948
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  5084980 tttttcttatgaaatgatattttctaaaatata 5084948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 6657711 - 6657794
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  6657711 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 6657794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 7504163 - 7504080
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  7504163 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 7504080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 16814992 - 16814960
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  16814992 tttttcttatgaaatgatattttctaaaatata 16814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 16854272 - 16854240
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  16854272 tttttcttatgaaatgatattttctaaaatata 16854240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 21836551 - 21836583
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  21836551 tttttcttatgaaatgatattttctaaaatata 21836583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 36049605 - 36049573
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  36049605 tttttcttatgaaatgatattttctaaaatata 36049573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 39879060 - 39878977
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  39879060 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 39878977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 131; Significance: 8e-68; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 48273 - 48415
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48273 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 48372  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| |||||||||||| |||||| ||||||||||||||||||    
T  48373 gtaccggtacaccttaaattgcgggtgtaccgtagaagttccc 48415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 58123 - 58170
Alignment:
Q  103 cgagagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  58123 cgagagtaccggtacaccttaaattgcgggtgtaccgtagaagttccc 58170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 8e-68; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 55722741 - 55722883
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55722741 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 55722840  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||    
T  55722841 gtaccggtacaccttaatttgcgggtgtaccgtaaaagttccc 55722883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 41759801 - 41759660
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41759801 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 41759702  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||| ||||||| ||||||| ||| |||||||||||||||||    
T  41759701 gtaccggtacactttaatttacgggtgtaccgtagaagttcc 41759660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 48579041 - 48578907
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgagagtactggt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  48579041 ttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgagagtaccggt 48578942  T
Q  116 acaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||||||||| ||| ||||||||||||||||||    
T  48578941 acaccttaatttacgggtgtaccgtagaagttccc 48578907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 28037948 - 28038093
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa-aatgatagttaatttataaaaatgtaagcgag 106  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28037948 gttttttcttataaaatgatattttctaaaatatatatttcaacaaaaacctatttctttcataaaaaaatgatagttaatttataaaaatgtaagcgag 28038047  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||    
T  28038048 agtaccggtacaccttaatttgtgggtgtaccgtagaagttcccat 28038093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 53388989 - 53388848
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataa-aaaatgatagttaatttataaaaatgtaagcgag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  53388989 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaaatgatggttaatttataaaaatgtaaacgag 53388890  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    ||||| ||||||||||||||||| |||||||| |||||||||    
T  53388889 agtaccggtacaccttaatttgcagatgtaccatagaagttc 53388848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 47302243 - 47302386
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||||    
T  47302243 gttttttcttataaaatgatattttttaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattataagcgag 47302342  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| |||||||| |||||| ||| ||||||||||||||||||    
T  47302343 agtaccggtacaccgtaatttacgggtgtaccgtagaagttccc 47302386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 37855384 - 37855526
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcga 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |||||||||    
T  37855384 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacttattttctttcataaaaaatgacagttaatttataaaaattgtaagcga 37855483  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    | |||| ||||||||||||||| | ||||||||||||||||||    
T  37855484 gggtaccggtacaccttaatttacagatgtaccgtagaagttc 37855526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 3716589 - 3716736
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||    
T  3716589 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaattatagttaatttataaaaattgtaagcgaga 3716688  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccatatt 155  Q
    |||| |||||||| |||||| |   |||||||||||||||||| ||||    
T  3716689 gtaccggtacaccgtaatttccaagtgtaccgtagaagttcccttatt 3716736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 51435956 - 51435812
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataa-aaaatgatagttaattt-ataaaaatgtaagcga 105  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||  ||    
T  51435956 gttttttcttataaaatggtattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaaatgatagttaatttaaaaaaaatgtaaatga 51435857  T
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| | ||||||||||||||||||| |||||| |||||||||||    
T  51435856 gagttccggtacaccttaatttgcgggtgtaccatagaagttccc 51435812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 38836114 - 38836256
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa-atgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||  |||||||||||    
T  38836114 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttttttcataaaaaattataattaatttacaaaagttgtaagcgaga 38836213  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| | |||||| |||||||| | ||||||||||||||||||    
T  38836214 gtaccgatacaccgtaatttgcaggtgtaccgtagaagttccc 38836256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 11109733 - 11109596
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacacctattt-ctttcataaaaaa-tgatagttaatttataaaaatgt-aagcgagagtact 112  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||||| | ||||||||||||     
T  11109733 ttataaaatgatattttctaaaatatatatgtcaacaaacatcaattttctttcataaaaaaatgatagttaatttataaaaattttaagcgagagtacc 11109634  T
Q  113 ggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  11109633 ggtacaccttaatttgcgggtgtaccgtagaagttccc 11109596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 34280366 - 34280221
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  34280366 ttttttcatataaaatgatattttttaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgaga 34280267  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccata 153  Q
    |||| ||||||||  ||||| ||| |||||| ||||||| ||||||    
T  34280266 gtaccggtacaccgcaatttacgggtgtaccatagaagtccccata 34280221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 37519108 - 37518965
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  37519108 gtttcttcttataaaattatattttctaaaatatatatgtcaacaaacacttattttcttcataaaaaatgatagttaatttataaaaattgtaagcgag 37519009  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||||| || ||  |||||| ||| ||||||||||||||||||    
T  37519008 agtactgatatactgtaatttacgggtgtaccgtagaagttccc 37518965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 37523324 - 37523181
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  37523324 gtttcttcttataaaattatattttctaaaatatatatgtcaacaaacacttattttcttcataaaaaatgatagttaatttataaaaattgtaagcgag 37523225  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||||| || ||  |||||| ||| ||||||||||||||||||    
T  37523224 agtactgatatactgtaatttacgggtgtaccgtagaagttccc 37523181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 33076122 - 33075978
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataa-aaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  33076122 ttttttcgtataaaataatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaaatgatagttaatttataaaaattgtaagcgag 33076023  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||| |||||||| |||||| ||| |||||| ||||||| ||||    
T  33076022 agtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 33075978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 27539181 - 27539317
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||| | ||||| |||    
T  27539181 ttttttcatataaaatgatattttctaaaatatatatatcaacaaacacctattttcttcataaaaaattatagttaatttataaaaattataagcaaga 27539280  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||| |||||||| |||||| |||||||||| |||||    
T  27539281 gtaccggtacaccataatttacggatgtaccatagaa 27539317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 30343089 - 30343232
Alignment:
Q  9 ttttttcttataaaatgatattttctaaa--atatatatgtcaacaaacacctatttctttcat-aaaaaatgatagttaatttataaaaa-tgtaagcg 104  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||| |||||| |    
T  30343089 ttttttcttataaaatgatattttctaaaatatatatatgtcaacaaacacctattttcttcataaaaaaatgatagttaatttataaaaattgtaagtg 30343188  T
Q  105 agagtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    ||||||  |||| ||| |||||||||| ||||||||||||||||    
T  30343189 agagtagcggtaaaccgtaatttgcgggtgtaccgtagaagttc 30343232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 30539841 - 30539962
Alignment:
Q  26 atattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggtacaccttaa 124  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||  ||||||| |||    
T  30539841 atattttctaaaatatatatgtcaacaaacacctatttttttcataaaaaatgatagttaatttataaaaattataagcgagagtaccagtacaccgtaa 30539940  T
Q  125 tttgcggatgtaccgtagaagt 146  Q
    ||| ||| |||||| |||||||    
T  30539941 tttacgggtgtaccatagaagt 30539962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 52592074 - 52592199
Alignment:
Q  26 atattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggtacaccttaa 124  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||||||||||| ||| |||||||||| |||| |||||||||| |||||||| |||    
T  52592074 atattttctaaaatatatatgtcaacaaacacttattttcttcataaaaaatgataattactttataaaaattgtatgcgagagtaccggtacaccgtaa 52592173  T
Q  125 tttgcggatgtaccgtagaagttccc 150  Q
    ||| ||||||||||||||||||||||    
T  52592174 tttacggatgtaccgtagaagttccc 52592199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 46041965 - 46042101
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||| |||||    
T  46041965 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattataaacgaga 46042064  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||| |||||| | |||||  ||| |||||| |||||    
T  46042065 gtaccggtacatcgtaattcacgggtgtaccatagaa 46042101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 14802983 - 14803080
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtac 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14802983 ttataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtac 14803080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 52589336 - 52589474
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| | ||| | |||    
T  52589336 ttttttcatataaaatgatattttctaaaatatatatgtcaataaacacctattttcttcataaaaaattatagttaatttataaaaattataaacaaga 52589435  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||  |||||||| |||||| ||  |||||| |||||||    
T  52589436 gtatcggtacaccgtaatttacgagtgtaccatagaagt 52589474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 43137505 - 43137375
Alignment:
Q  17 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta-taaaaatgtaagcgagagtactggt 115  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  || | |||||||||||||||||||| ||||| |||||| |||||||| | |    
T  43137505 tataaaatgatattttttaaaatatatatgtcaacaaacacctattttctttacaaaaaatgatagttaatttattaaaattgtaagtgagagtaccgat 43137406  T
Q  116 acaccttaatttgcggatgtaccgtagaagt 146  Q
    ||||| |||||  ||| |||||| |||||||    
T  43137405 acaccgtaattcacgggtgtaccatagaagt 43137375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 9858514 - 9858654
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||||||||||||||||||||||||||||||| || |||||||| | || ||| |||||| |||||| ||||||||||||||||  | | |||  |||    
T  9858514 ttttttcttataaaatgatattttctaaaatataaatatcaacaaatagctttttatttcat-aaaaataatagttaatttataaatttttgaagtaaga 9858612  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||| ||||||||||||||||| | |||||||||||||||||    
T  9858613 gtaccggtacaccttaatttgcaggtgtaccgtagaagttcc 9858654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 31908707 - 31908846
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||| | || ||| |||||| |||| ||||||||||||||||||  | | |||  |||    
T  31908707 ttttttcttatgaaatgatattttttaaaatataaatatcaacaaatagctttttatttcat-aaaattgatagttaatttataaatttttgaagtaaga 31908805  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  31908806 gtaccggtacaccttaatttgcgggtgtaccgtagaagttc 31908846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 36091323 - 36091463
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||||||||||| | || |||||||| | || ||| |||||| |||||||||||||||||||||||  | | |||  |||    
T  36091323 ttttttcttatgaaatgatattttctaaaatacaaatatcaacaaatagctttttatttcat-aaaaatgatagttaatttataaatttttgaagtaaga 36091421  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||| ||||||||||||||| | | |||||||||||||||||    
T  36091422 gtaccggtacaccttaatttacaggtgtaccgtagaagttcc 36091463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 36631178 - 36631091
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| ||||||| |||| ||||||||| || | |||||| |  ||||| |||||||||||||||| ||||||||||||||    
T  36631178 gttttttcttatgaaatgatgttttataaaatataaatattaacaaatagttatttatttcataaaaaatgatcgttaatttataaaa 36631091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 47302661 - 47302802
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||| ||||||||||||||| || |||||||| | || ||| |||||| |||||| |||||||||||| | |  | | |||   ||    
T  47302661 ttttttcttatgaaatgacattttctaaaatataaatatcaacaaataactctttatttcat-aaaaataatagttaatttaaagatttttaaagtagga 47302759  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| |||| | |||||||| ||||||||||||||||||||||    
T  47302760 gtaccggtaaaacttaatttacggatgtaccgtagaagttccc 47302802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 24980084 - 24979944
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa-atgtaagcgag 106  Q
    ||||||||| |||||||||| || | ||||||||| || |  ||||| | |||||| || |||||||||| || |||||||||||||| ||| |||| |     
T  24980084 gttttttctaataaaatgatgttctataaaatataaatattgacaaatagctatttattacataaaaaattatcgttaatttataaaatatg-aagcaat 24979986  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    ||||| ||||||||||| |||| |  ||||||||||||||||    
T  24979985 agtaccggtacaccttattttgtgagtgtaccgtagaagttc 24979944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 42177485 - 42177337
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||||| || | ||||||||| || |  | ||| |  ||||| |||||||||||||||| |||||||||||||| | | |||  ||    
T  42177485 gttttttcttatgaaatgatgttctataaaatataaatattgataaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaag 42177386  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccatatt 155  Q
    ||||| | ||||||| | |||| |  |||||||||||||||||||||||    
T  42177385 agtaccgatacacctcattttgtgagtgtaccgtagaagttcccatatt 42177337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 50776035 - 50776122
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| ||||||| |||| ||||||||| || |  ||||| |  ||||| |||||||||||||||| ||||||||||||||    
T  50776035 gttttttcttatgaaatgatgttttataaaatataaatattgacaaataattatttatttcataaaaaatgattgttaatttataaaa 50776122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 5970842 - 5970700
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| |||||||||| | ||||||||| || |  ||||| | |||||| || |||||||||||||  ||||||||||||| | | |||| ||    
T  5970842 gttttttcttatgaaatgatattctataaaatataaatattgacaaatagctatttattacataaaaaatgattattaatttataaaattatgaagcaag 5970743  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    ||||| |||||| || | | || |  |||||||||||||||||    
T  5970742 agtaccggtacatctcactatgtgagtgtaccgtagaagttcc 5970700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 32570634 - 32570776
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||| ||||| ||||||| |||||||||||||| || |  ||||| |||||||| ||||||  |||||||| |||||||||||||  | | |||  |||    
T  32570634 tttttccttatgaaatgatgttttctaaaatata-atattgacaaatacctatttatttcat--aaaatgatcgttaatttataaatttatgaagtaaga 32570730  T
Q  108 gtactggtacaccttaatttgcg-gatgtaccgtagaagttcccat 152  Q
    |||| ||||||||| |||||| | | ||||||||||||||||||||    
T  32570731 gtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccat 32570776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 31681548 - 31681592
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||    
T  31681548 gagtactggtacaccttaatttacgggtgtaccgtagaagttccc 31681592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 32289046 - 32288959
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| ||||||| || | |||| |||| || | |||||| | |||||| |||||||||||||||| |||||| |||||||    
T  32289046 gttttttcttatgaaatgatgttctataaagtataaatattaacaaatagctatttatttcataaaaaatgatcgttaatatataaaa 32288959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 53695528 - 53695386
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgag- 106  Q
    |||||||||||| |||| | ||||||||||||||| || |||||||| | || ||| || |||||||| | |||||||||||| | |  | | |   ||     
T  53695528 gttttttcttatgaaataacattttctaaaatataaatatcaacaaataactctttattccataaaaa-taatagttaatttaaagatttttgaattagg 53695430  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||    
T  53695429 agtaccggtacaccttaatttgcaggtgtaccgtagaagttccc 53695386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 9356523 - 9356437
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||||||||| |||| ||||| | ||||||||| || | |||||| | |||||| ||| ||||||||||||  |||||||||||||    
T  9356523 ttttttcttatgaaataatattctataaaatataaatattaacaaatagctatttattttataaaaaatgatttttaatttataaaa 9356437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 46215913 - 46215772
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||| |||||||||||| ||||| ||||||||| || |||||||| | || ||| || ||| |||||| |||||||||||| | |  | | |||   ||    
T  46215913 tttttccttataaaatgacattttttaaaatataaatatcaacaaatagctttttattccat-aaaaataatagttaatttaaagatttttgaagtagga 46215815  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||    
T  46215814 gtaccggtacacattaatttgcgagtgtaccgtagaagttccc 46215772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 50383472 - 50383358
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||  |||||||||| | ||||||||| || | || ||| |  |||||||| ||| ||||||||| |||||||||||||| | | |||||||    
T  50383472 gttttttcttacgaaatgatattctataaaatataaatattaaaaaatagatatttcttacatgaaaaatgatcgttaatttataaaattatgaagcgag 50383373  T
Q  107 agtactggtacacct 121  Q
    ||||| | |||||||    
T  50383372 agtaccgatacacct 50383358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 50607999 - 50608089
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    ||||| |||||||||||||||| |||||||||||||| | | |||  |||||| |||||||||| | |||| |  ||||||||||||||||    
T  50607999 tatttatttcataaaaaatgattgttaatttataaaattatgaagaaagagtattggtacacctcattttgtgagtgtaccgtagaagttc 50608089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 23058857 - 23058764
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    |||||||| ||| ||||||||| |||||||| ||||| | | |||||||||||| |||||| || | |||| |  |||||||||||||||||||    
T  23058857 tatttcttacatgaaaaatgatcgttaatttgtaaaagtatgaagcgagagtaccggtacatctcactttgtgagtgtaccgtagaagttccca 23058764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 30060670 - 30060530
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    |||||||| | |||| ||||||||||||||||| ||| | ||||| | |||||| |||||| |||| |||| |||| |||||| |  | | |||| ||||    
T  30060670 tttttcttctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcat-aaaattgatcgttagtttatagatttatgaagcaagag 30060572  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||  ||||||||| ||||| ||  ||||||||||||||||||    
T  30060571 tatcggtacacctcaatttacgagtgtaccgtagaagttccc 30060530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 30891286 - 30891170
Alignment:
Q  21 aaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacac 119  Q
    |||||||||||||||||||| | || |||||||| | || ||| ||||||| ||||||||||||||| |||| |  | | |||  | ||||| |||||||    
T  30891286 aaatgatattttctaaaatacaaatatcaacaaatagctctttatttcata-aaaatgatagttaatatatagatttttaaagttaaagtaccggtacac 30891188  T
Q  120 cttaatttgcggatgtac 137  Q
    ||||||||| ||||||||    
T  30891187 cttaatttgtggatgtac 30891170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 18052077 - 18052041
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatat 45  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18052077 ttttttcttataaaatgatgttttctaaaatatatat 18052041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 25607830 - 25607694
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||| ||||| ||||||| |||||||||||||| || |  ||||| |||||||| ||||||  ||||| || |||||||||||||  | | ||| ||||    
T  25607830 tttttccttatgaaatgatgttttctaaaatata-atattgacaaatacctatttatttcat--aaaataatcgttaatttataaatttatgaagtgaga 25607734  T
Q  108 gtactggtacaccttaatttgcg-gatgtaccgtagaagt 146  Q
    |||| ||||||||| |||||| | | ||||||||||||||    
T  25607733 gtaccggtacacctcaatttgtgaggtgtaccgtagaagt 25607694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 30348255 - 30348163
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| |||||||||||||||| |||||||||||||| | | |||  ||||||| ||||||||| | |||| |  |||||||||| |||||||    
T  30348255 tatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgattgtaccgtagtagttccc 30348163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 27761543 - 27761400
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||||| || | ||||||||| || |  ||||| | |||||| || |||||||||| || ||||||| |||||| | | |||| ||    
T  27761543 gttttttcttatgaaatgatgttctataaaatataaatattgacaaatagctatttattacataaaaaattatcgttaattcataaaattatgaagcaag 27761444  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| | ||||||| | |||| |  |||||||||||| |||||    
T  27761443 agtaccgatacacctcactttgtgagtgtaccgtagaaattccc 27761400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 38008417 - 38008504
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| ||||||| || | || |||||| || |  ||||| |  ||||| |||||||||||||||| ||||||||||||||    
T  38008417 gttttttcttatgaaatgatgttctatacaatataaatattgacaaatagttatttatttcataaaaaatgatcgttaatttataaaa 38008504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 43959134 - 43958996
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaat-gtaagcgagag 108  Q
    |||||||||| ||||||| |||||||||||||| ||| | |||||   |||||| |||||| |||| |||| ||||||||||| |  | | |||  ||||    
T  43959134 tttttcttatgaaatgatgttttctaaaatataaatgccgacaaatgactatttatttcat-aaaattgatcgttaatttatagatttaggaagtaagag 43959036  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    ||| |||||||| |||||| |   ||||||||||||||||    
T  43959035 taccggtacaccataatttacaagtgtaccgtagaagttc 43958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 46564855 - 46564788
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||| | || ||| || ||||||||    
T  46564855 gttttttcttatgaaataatattttctaaaatataaaagtcaacaaatatctctttattacataaaaa 46564788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 48647162 - 48647075
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||| ||| ||||||| || | ||||||||| ||||  ||||| |  ||||| ||||| |||||||||| ||||||||||||||    
T  48647162 gttttttcatatgaaatgatgttctataaaatataaatgttgacaaatagttatttatttcacaaaaaatgatcgttaatttataaaa 48647075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 9579806 - 9579772
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  9579806 gttttttcttataaaatgatgttttctaaaatata 9579772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 9585501 - 9585467
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  9585501 gttttttcttataaaatgatgttttctaaaatata 9585467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 20927705 - 20927739
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  20927705 gttttttcttataaaataatattttctaaaatata 20927739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 23390764 - 23390798
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  23390764 gttttttcttataaaataatattttctaaaatata 23390798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 25814523 - 25814489
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  25814523 gttttttcttataaaataatattttctaaaatata 25814489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 30839385 - 30839351
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  30839385 gttttttcttataaaataatattttctaaaatata 30839351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 30951266 - 30951232
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  30951266 gttttttcttataaaataatattttctaaaatata 30951232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 40319264 - 40319298
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  40319264 gttttttcttataaaataatattttctaaaatata 40319298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 43363593 - 43363678
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||||||||| || |||| |||| ||||||||| || | || ||| | |||||| |||||| ||||||||| ||||||||||||||    
T  43363593 ttttttcttatgaattgatgttttataaaatataaatattaataaataactatttatttcat-aaaaatgatcgttaatttataaaa 43363678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 52104550 - 52104516
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  52104550 gttttttcttataaaataatattttctaaaatata 52104516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 52257398 - 52257479
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  |||||||| |||||||||||    
T  52257398 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaaatgatcgttaatttata 52257479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 52940745 - 52940779
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  52940745 gttttttcttataaaatgatgttttctaaaatata 52940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 10332900 - 10332933
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||| |||||||||||||||||    
T  10332900 ttttttcttataaaataatattttctaaaatata 10332933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 47920541 - 47920606
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaa 75  Q
    ||||||||||||||| ||||||||||||||||| || || ||| | | || ||| |||||||||||    
T  47920541 tttttcttataaaataatattttctaaaatataaatatcgacatataactttttatttcataaaaa 47920606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 48254082 - 48254049
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||| |||||||||||||||||    
T  48254082 ttttttcttataaaataatattttctaaaatata 48254049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 50498470 - 50498389
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattt 89  Q
    |||||||||||| |||||||||| | ||||||||| ||||  ||||| | ||||||  | |||||||||| || ||||||||    
T  50498470 gttttttcttatgaaatgatattctataaaatataaatgttgacaaatagctatttactacataaaaaataatcgttaattt 50498389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 16004674 - 16004642
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  16004674 tttttcttatgaaatgatattttctaaaatata 16004642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 27736728 - 27736664
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||| | |||| ||||||||||||||||| ||| | ||||| | |||||| ||||||||||    
T  27736728 tttttcttctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcataaaa 27736664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 32845795 - 32845711
Alignment:
Q  11 ttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||| |||| |||||||||| | |||||||||  | |  ||||| | |||||| || ||||||||||||| ||||||||||||||    
T  32845795 tttttttatgaaatgatattctataaaatataactattgacaaaaagctatttattacataaaaaatgatcgttaatttataaaa 32845711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 33491741 - 33491677
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||| | |||| ||||||||||||||||| ||| | ||||| | |||||| ||||||||||    
T  33491741 tttttcttctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcataaaa 33491677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 38955183 - 38955151
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  38955183 tttttcttatgaaatgatattttctaaaatata 38955151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 38961105 - 38961073
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    ||||| |||||||||||||||||||||||||||    
T  38961105 ttttttttataaaatgatattttctaaaatata 38961073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 39512920 - 39512988
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaa 76  Q
    |||||||||||| |||||||||||| ||||||||| | ||| | ||||| || ||| || |||||||||    
T  39512920 gttttttcttatgaaatgatattttttaaaatataaaagtcgataaacatctctttattacataaaaaa 39512988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 45692765 - 45692621
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||| | || | ||||||||| || |  | ||| | |||||| || |||||||||| || ||| |||||||||| |   |||| ||    
T  45692765 gttttttcttatgaaatgttgttctataaaatataaatattgataaatagctatttattacataaaaaattatcgttcatttataaaattaagaagcaag 45692666  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||  ||||||||||| ||| ||  |||||||||||||||||||    
T  45692665 agtatcggtacaccttattttacgagtgtaccgtagaagttccca 45692621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 46222133 - 46222101
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||| ||||||||||||||||||||||    
T  46222133 tttttcttatgaaatgatattttctaaaatata 46222101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 54499840 - 54499923
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || | |||||| |||| ||| | ||||  ||| |||| |||||||||||||    
T  54499840 tttttcttatgaaatgatgttttctaaaatataaatattaacaaatacctttttatctcat-taaagtgatcgttaatttataaa 54499923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 56361350 - 56361318
Alignment:
Q  115 tacaccttaatttgcggatgtaccgtagaagtt 147  Q
    ||||||||||||||||| |||||||||||||||    
T  56361350 tacaccttaatttgcgggtgtaccgtagaagtt 56361318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 2259167 - 2259318
Alignment:
Q  8 gttttttcttataaaatgatatt-ttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgag 106  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2259167 gttttttcttataaaatgatattattttaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgag 2259266  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccatatttta 158  Q
    |||||  |||||||||||||||||| |||||||||||||||||| |||||||    
T  2259267 agtacctgtacaccttaatttgcgggtgtaccgtagaagttcccttatttta 2259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 17545867 - 17546009
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17545867 gttttttcttataaaataatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga 17545966  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||  |||||||||||||||||| |||||  |||||||||||    
T  17545967 gtaccagtacaccttaatttgcgggtgtactatagaagttccc 17546009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 6848774 - 6848920
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttc------ataaaaaatgatagttaatttataaaaatgtaagc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||    
T  6848774 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttttttttttttataaaaaatgatagttaatttataaaaatgtaagc 6848873  T
Q  104 gagagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  6848874 gagagtaccggtacaccttaatttacgggtgtaccgtagaagttccc 6848920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 32833917 - 32833774
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  32833917 gttttttcttataaaatgatattttctaaaatatatatgtcaatagacacttattttcttcataaaaaatgatagttaatttataaaaattgtaagcgag 32833818  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||  ||||||| |||||||||||||||||||||||||||||    
T  32833817 agtaccagtacaccgtaatttgcggatgtaccgtagaagttccc 32833774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 13390652 - 13390797
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  13390652 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgaga 13390751  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccata 153  Q
    |||| |||||||| |||||| | | |||||| ||||||| ||||||    
T  13390752 gtaccggtacaccgtaatttacaggtgtaccatagaagtccccata 13390797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 24213175 - 24213318
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||| ||     
T  24213175 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagtgaa 24213274  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| | || ||| |||||||||| |||||||||||| |||||    
T  24213275 agtaccgatataccgtaatttgcgggtgtaccgtagaaattccc 24213318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 24487421 - 24487286
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  24487421 ttataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaacttataaaaattgtaagcgagagtaccg 24487322  T
Q  114 gtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||||||||||||| |||||  ||||||||| ||||    
T  24487321 gtacaccttaatttacggatacaccgtagaaattcc 24487286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 8401559 - 8401412
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatat--atatgtcaacaaacacctatttctttcat-aaaaaatgatagttaatttataaaaa-tgtaagcg 104  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||  ||||| |||||||||||||||||||||||||| |||||| |    
T  8401559 ttttttcttataaaatgatattttctaaaatatatatatgtcaacaaacacctattttcttcataaaaaaatgatagttaatttataaaaattgtaagtg 8401460  T
Q  105 agagtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    ||||||  |||||||| |||||||||| |||||||||||| |||||||    
T  8401459 agagtagcggtacaccgtaatttgcgggtgtaccgtagaaattcccat 8401412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 4110827 - 4110957
Alignment:
Q  17 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggt 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| || |||    
T  4110827 tataaaatgatattttcgaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagaaccggt 4110926  T
Q  116 acaccttaatttgcggatgtaccgtagaagt 146  Q
    ||||| |||||| ||| |||||| |||||||    
T  4110927 acaccgtaatttacgggtgtaccatagaagt 4110957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 26358686 - 26358564
Alignment:
Q  17 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggt 115  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  26358686 tataaaatgatattttttaaaatatatatgtcaacaaacacgtattttcttcataaaaaatgatagttaatttataaaaattataagcgagagtactggt 26358587  T
Q  116 acaccttaatttgcggatgtacc 138  Q
    ||||| |||||| ||| ||||||    
T  26358586 acaccataatttacggttgtacc 26358564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 1096481 - 1096618
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||| |||||||||||||||||| | |||||||||    
T  1096481 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcctcat-aaaaattatagttaatttataaaaattataagcgaga 1096579  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||| |||||||| |||||| ||| |||||| |||||||    
T  1096580 gtaccggtacaccgtaatttacgggtgtaccatagaagt 1096618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 15383344 - 15383204
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||| |||| |||||| ||||||||||||||| || |||||||| | || ||| || |||||||| | |||||||||||| | |  | | |||   ||    
T  15383344 tttttttttatgaaatgacattttctaaaatataaatatcaacaaatagctttttattccataaaaa-taatagttaatttaaagatttttgaagtagga 15383246  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  15383245 gtaccggtacaccttaatttgcgggtgtaccgtagaagttcc 15383204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 20469178 - 20469095
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||||| |||||||||||||||||||| | || |||| ||| | || ||| ||||||| ||||||||||||||||||||    
T  20469178 gttttttcttatgaaatgatattttctaaaatacaaatatcaataaatagctctttatttcata-aaaatgatagttaatttata 20469095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 34195922 - 34195878
Alignment:
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  34195922 agtaccggtacaccttaatttgcggatgtaccgtagaagttccca 34195878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 2564990 - 2565077
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||  ||||||| || | ||||||||| || | |||||| | |||||| |||||||||||||||| ||||||||||||||    
T  2564990 gttttttcttaagaaatgatgttctataaaatataaatattaacaaataactatttatttcataaaaaatgatcgttaatttataaaa 2565077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 9687039 - 9687126
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| |||||||||||| ||||||||| || |  | ||| |  ||||| |||||||||||||||| ||||||||||||||    
T  9687039 gttttttcttatgaaatgatattttataaaatataaatattgataaatagttatttatttcataaaaaatgatcgttaatttataaaa 9687126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 33574666 - 33574759
Alignment:
Q  58 ctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| || ||||||||||||| |||||||||||||| | | |||| ||||||| ||||||||| | |||| |  ||||||||||||||||||    
T  33574666 ctatttattacataaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 33574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 33574844 - 33574937
Alignment:
Q  58 ctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| || ||||||||||||| |||||||||||||| | | |||| ||||||| ||||||||| | |||| |  ||||||||||||||||||    
T  33574844 ctatttattacataaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 33574937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 7344463 - 7344429
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||||||||||||||||||    
T  7344463 gttttttcttataaaatgatattttctaaaatata 7344429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 18772136 - 18772210
Alignment:
Q  21 aaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||||| || | ||||||||| || | |||||| |  |||||||||||||||||||||| ||||||||||||||    
T  18772136 aaatgatgttctataaaatataaatattaacaaatagttatttctttcataaaaaatgatcgttaatttataaaa 18772210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 21970573 - 21970654
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    |||||||||| |||||||||||| ||||||||| ||| | ||||| | |||||| |||||| |||| |||| |||||||||||    
T  21970573 tttttcttatgaaatgatattttgtaaaatataaatgccgacaaataactatttatttcat-aaaattgatcgttaatttata 21970654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 31644550 - 31644410
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    |||||||| | |||| ||||||||||||||||| ||| | ||||| | |||||| |||||| |||| |||| |||| |||||| |  | | |||| ||||    
T  31644550 tttttcttctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcat-aaaattgattgttagtttatagatttatgaagcaagag 31644452  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| | ||||||| ||||| ||  ||||||||||||||||||    
T  31644451 taccgatacacctcaatttacgagtgtaccgtagaagttccc 31644410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 3448243 - 3448209
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  3448243 gttttttcttataaaataatattttctaaaatata 3448209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 5078411 - 5078445
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  5078411 gttttttcttataaaataatattttctaaaatata 5078445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 6265085 - 6265039
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaa 54  Q
    |||||||||||| |||||| ||||||||||||||| || ||||||||    
T  6265085 gttttttcttatgaaatgacattttctaaaatataaatatcaacaaa 6265039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 8376161 - 8376024
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcga-ga 107  Q
    ||||||||||| |||||| || |||||||||||| || |||||||| | || ||| || ||| |||||| |||||||||||| |||  | |||   | ||    
T  8376161 ttttttcttatgaaatgacatcttctaaaatataaatatcaacaaatagctttttattccat-aaaaataatagttaatttaaaaatttttaaaatagga 8376063  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||  | |||||||||||||| || ||||||||||||||    
T  8376062 gtatcgatacaccttaatttgtgggtgtaccgtagaagt 8376024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 17010626 - 17010672
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaa 54  Q
    ||||||||||||||||| | ||||||||||||||| || ||||||||    
T  17010626 gttttttcttataaaattacattttctaaaatataaatatcaacaaa 17010672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 22734966 - 22735000
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  22734966 gttttttcttataaaataatattttctaaaatata 22735000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 26958655 - 26958741
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    ||||||||||| ||||||| || | ||||||||| || |  ||||| | |||||| || |||||||||||||  |||||||||||||    
T  26958655 ttttttcttatgaaatgatgttctataaaatataaatattgacaaatagctatttattacataaaaaatgatcattaatttataaaa 26958741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 8549656 - 8549619
Alignment:
Q  58 ctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  8549656 ctatttatttcataaaaaatgatcgttaatttataaaa 8549619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 18667830 - 18667793
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgt 47  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  18667830 ttttttttataaaatgatattttctaaaatataaatgt 18667793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 30020498 - 30020418
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    ||||||||||| |||| | ||||||||||||||| || |||||||| |  | ||| ||||||| ||||| ||||||||||||    
T  30020498 ttttttcttatgaaataacattttctaaaatataaatatcaacaaatagttctttatttcata-aaaataatagttaattta 30020418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 33610843 - 33610798
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaa 53  Q
    |||||||||||| |||| ||||||||||||||||| | ||||||||    
T  33610843 gttttttcttatgaaataatattttctaaaatataaaagtcaacaa 33610798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 6264987 - 6264943
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| | |||| ||||||||| |||||||||||||||||||||    
T  6264987 gagtaccgatacatcttaatttgtggatgtaccgtagaagttccc 6264943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 9226467 - 9226550
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  9226467 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 9226550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 11763266 - 11763174
Alignment:
Q  58 ctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||||| || ||||||||||||| |||||||||||||| | | ||||  |||||| ||||||||| | | || |  |||||||||||||||||    
T  11763266 ctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactctgtgagtgtaccgtagaagttcc 11763174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 32430323 - 32430291
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaata 40  Q
    |||||||||||| ||||||||||||||||||||    
T  32430323 gttttttcttatgaaatgatattttctaaaata 32430291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 34315265 - 34315182
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  34315265 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 34315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 7e-59; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 13410812 - 13410951
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacacctattt-ctttcataaaaaatgatagttaatttataaaaat-gtaagcgagagtactg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  13410812 ttataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccg 13410911  T
Q  114 gtacaccttaatttgcggatgtaccgtagaagttcccata 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13410912 gtacaccttaatttgcggatgtaccgtagaagttcccata 13410951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 42917381 - 42917525
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat-aaaaaatgatagttaatttataaaaatgtaagcgag 106  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42917381 gttttttcttataaaatgatattttctaaaatatatatttcaacaaacacctatttctttcataaaaaaatgatagttaatttataaaaatgtaagcgag 42917480  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||| |||||||||||||||| || |||||| || |||||||||    
T  42917481 agtaccggtacaccttaatttgtgggtgtaccataaaagttccca 42917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 32467307 - 32467450
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| || ||||||||    
T  32467307 ttttttcttataaaatgatattttctgaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgcaagcgaga 32467406  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    |||| |||||||| |||||||||| |||||||||||||||||||    
T  32467407 gtaccggtacaccgtaatttgcgggtgtaccgtagaagttccca 32467450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 34302912 - 34303057
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | |||| ||||    
T  34302912 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttttttcataaaaaattatagttaatttataaaaattataagtgaga 34303011  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccata 153  Q
    |||| |||||||| |||||||| | |||||||||||||||||||||    
T  34303012 gtaccggtacaccgtaatttgcaggtgtaccgtagaagttcccata 34303057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 6561090 - 6561229
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||| |||    
T  6561090 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaattatagttaatttataaaaattgtaagcaaga 6561189  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagtt 147  Q
     ||| |||||||| |||||||| | |||||||||||||||    
T  6561190 ataccggtacaccgtaatttgcaggtgtaccgtagaagtt 6561229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 1661834 - 1661715
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  1661834 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacctatttttttcataaaaaatgatagttaatttataaaaattgtaagcgaga 1661735  T
Q  108 gtactggtacaccttaattt 127  Q
    | || |||||||| ||||||    
T  1661734 gcaccggtacaccgtaattt 1661715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 21605920 - 21606055
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  21605920 ttataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaacttataaaaattgtaagcgagagtaccg 21606019  T
Q  114 gtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||||||||||||| |||||  ||||||||| ||||    
T  21606020 gtacaccttaatttacggatacaccgtagaaattcc 21606055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 36338984 - 36338849
Alignment:
Q  12 tttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagta 110  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  36338984 tttcatataaaatgatattttccaaaatatacatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagta 36338885  T
Q  111 ctggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||||||||| |||||| ||| |||||| |||||||    
T  36338884 ctggtacaccgtaatttacgggtgtaccatagaagt 36338849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 43237497 - 43237350
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||| ||| |||||||||||||| |||||||||||    
T  43237497 ttttttcttataaaatgatattttctaaaatatatatgtcaaccaacacctattttcttcataaaaaattataattaatttataaaaattgtaagcgaga 43237398  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccatatt 155  Q
    |||| | |||||| |||||||| | |||||| ||||||||||| ||||    
T  43237397 gtaccgatacaccgtaatttgcaggtgtaccatagaagttcccttatt 43237350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 3056668 - 3056798
Alignment:
Q  17 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  3056668 tataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggt 3056767  T
Q  116 acaccttaatttgcggatgtaccgtagaagt 146  Q
    ||||| |||||| ||  |||||| |||||||    
T  3056768 acaccgtaatttacgagtgtaccatagaagt 3056798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 6532843 - 6532986
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| ||||||||||| ||||||||| ||||||||||    
T  6532843 gttttatcttataaaatgatattttctaaaatatatatgttaacaaacacctattttcttcataaaacatgatagttaaattataaaaattgtaagcgag 6532942  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||  | |||||| |||||||||||||||| ||| ||||||||    
T  6532943 agtatcgatacaccgtaatttgcggatgtacagtaaaagttccc 6532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 18228602 - 18228466
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||| ||||    
T  18228602 ttttttcatataaaatgatattttctaaaatatatatgtcaacaaacacgtattttcttcataaaaaatgatagttaatttataaaaattgtaagtgaga 18228503  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||| |||| ||| |||||| ||| |||||| |||||    
T  18228502 gtaccggtagaccgtaatttacgggtgtaccatagaa 18228466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 2414188 - 2414335
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||| ||||    
T  2414188 ttttttcatataaaatgatgttttctaaaatatatatgtcaacaaacacttattttcttcataaaaaatgatagttaatttataaaaattgtaagtgaga 2414287  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccatatt 155  Q
    |||| | |||||  |||||| |||||||||| ||||||| ||| ||||    
T  2414288 gtaccgttacactgtaatttacggatgtaccatagaagtccccttatt 2414335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 9535131 - 9535274
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||| ||||    
T  9535131 ttttttcatataaaatgatgttttctaaaatatatatgtcaacaaacacttattttcttcataaaaaatgatagttaatttataaaaattgtaagtgaga 9535230  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    |||| | ||||| ||||||| ||| |||||| ||||||| ||||    
T  9535231 gtaccgttacactttaatttacgggtgtaccatagaagtcccca 9535274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 24098143 - 24098283
Alignment:
Q  18 ataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggta 116  Q
    ||||||||||||||||||||||||||||||||||||| || |||||  |||||||||||||||| || ||||||||||| |||||||||||||||  |||    
T  24098143 ataaaatgatattttctaaaatatatatgtcaacaaagacttattttcttcataaaaaatgatattttatttataaaaattgtaagcgagagtaccagta 24098242  T
Q  117 caccttaatttgcggatgtaccgtagaagttcccatatttt 157  Q
    |||| |||||||| | ||||| |||||||||||| ||||||    
T  24098243 caccgtaatttgcaggtgtactgtagaagttcccttatttt 24098283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 2141506 - 2141644
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  2141506 ttttttcatataaaatgatgttttctaaaatatatatatcaacaaacacttattttcttcataaaaaatgatagttaatttataaaaattgtaagcgaga 2141605  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||  |||||||| ||||||  || |||||| |||||||    
T  2141606 gtaacggtacaccgtaatttatgggtgtaccatagaagt 2141644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 6113909 - 6113812
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtac 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  6113909 ttataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattataagcgagagtac 6113812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 6318428 - 6318325
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgaga 107  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||| |||||||||||||||||| |||||||||||    
T  6318428 tttttttttataaaatgatattttctaaaatatatatgtcaacaaatacctattttcttcgtaaaaaattatagttaatttataaaaattgtaagcgaga 6318329  T
Q  108 gtac 111  Q
    ||||    
T  6318328 gtac 6318325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 2029616 - 2029719
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgag 106  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||||| ||||||||| ||||||||||    
T  2029616 gttttatcttataaaataatattttctaaaatatataagtcaacaaacacctattttcttcataaaaaatgacagttaaattataaaaattgtaagcgag 2029715  T
Q  107 agta 110  Q
    ||||    
T  2029716 agta 2029719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 13091178 - 13091319
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||||||||||||| || |||||||| | || ||| |||||| |||||||||||||||||||||||  | | |||  |||    
T  13091178 ttttttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttcat-aaaaatgatagttaatttataaatttttgaagtaaga 13091276  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||    
T  13091277 gtaccggtacaccttaatttacgggtgtaccgtagaagttccc 13091319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 22780778 - 22780920
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa-aatgtaagcgagag 108  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||| |||||| ||||| ||||||||||||||||||||||||   | ||| | ||||    
T  22780778 tttttcttatgaaatgatattttctaaactataaatgtcaacaaacaactatttttttcacaaaaaatgatagttaatttataaattttttaaacaagag 22780877  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    | | |||||| ||||||||||   |||||||||||||||||||    
T  22780878 tgccggtacatcttaatttgcaagtgtaccgtagaagttccca 22780920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 14967496 - 14967637
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||||||||||||| || |||||||| | || ||| |||||| |||||||||||||||||||||||  | | |||  |||    
T  14967496 ttttttcttatgaaatgatattttctaaaatatagatatcaacaaatagctttttatttcat-aaaaatgatagttaatttataaatttttgaagtaaga 14967594  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| | ||||||||||||||| | ||||||||||||||||||    
T  14967595 gtaccgatacaccttaatttgcaggtgtaccgtagaagttccc 14967637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 9589473 - 9589610
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||||| || ||||||||||||||||| |||| || |||||||| | || ||| |||||| |||||||||||||||||||||||  | | |||  |||    
T  9589473 ttttttctcatgaaatgatattttctaaagtataaatatcaacaaatagctttttatttcat-aaaaatgatagttaatttataaatttttgaagtaaga 9589571  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagt 146  Q
    |||| | |||||||||||||| |||||||||||||||||    
T  9589572 gtaccgatacaccttaatttgtggatgtaccgtagaagt 9589610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 29744166 - 29744307
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| |||||||||||||||||||||| || |||| ||| | || ||| |||||| |||||||||||||||||||||||  | | |||| |     
T  29744166 gttttttcttatgaaatgatattttctaaaatataaatatcaataaatagctctttatttcat-aaaaatgatagttaatttataaatttttgaagcaaa 29744264  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    ||||| ||||||| |||||||| |  ||||||||| |||||||    
T  29744265 agtaccggtacactttaatttgtgagtgtaccgtataagttcc 29744307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 12362498 - 12362357
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgaga- 107  Q
    ||||| ||||| |||||| |||||||||||||||||| |||||||| | || ||| || |||||||| | |||||||||||| | |  | | ||  |||     
T  12362498 tttttccttatgaaatgacattttctaaaatatatatatcaacaaatagctctttattccataaaaa-taatagttaatttaaagatttttgagatagaa 12362400  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  12362399 gtaccggtacaccttaatttgcggatgtaccttagaagttccc 12362357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 41802371 - 41802507
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||| |||||||||||||| | || |||||||| | || ||| |||||| |||||||||||||||||||||||  | | ||   ||    
T  41802371 gttttttcttattaaatgttattttctaaaatacaaatatcaacaaatagctctttatttcat-aaaaatgatagttaatttataaatttttaaaataag 41802469  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||||  ||||||||||||||  |||||||||||||||    
T  41802470 agtaccagtacaccttaatttatggatgtaccgtagaa 41802507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 2318567 - 2318431
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||||||| ||||||| ||||||||||||||| || |||||||| | || ||| || |||||||||| ||| |||||||| | |  | | |||   ||    
T  2318567 ttttttcttacaaaatgacattttctaaaatataaatatcaacaaatagctctttattccataaaaaataataattaatttaaagatttttgaagtagga 2318468  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaa 144  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  2318467 gtaccggtacaccttaatttgcgggtgtaccgtagaa 2318431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 13127244 - 13127389
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||||| || | ||||||||| || |  | ||| |  ||||| ||||||||||||| || |||||||||||||| | | |||  ||    
T  13127244 gttttttcttatgaaatgatgttctataaaatataaatattgataaatagttatttatttcataaaaaattatcgttaatttataaaattatgaagaaag 13127343  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcccat 152  Q
    ||||| ||||||||| | |||| | |||||||||||||||||||||    
T  13127344 agtaccggtacacctcattttgtgaatgtaccgtagaagttcccat 13127389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 1490829 - 1490746
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttata 92  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||| | || ||| |||||| |||| ||||| ||||||||||    
T  1490829 gttttttcttataaaatgatagtttttaaaatataaatgtcaacaaaaaactttttatttcat-aaaagtgatatttaatttata 1490746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 6260282 - 6260424
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||||||||||| || | ||||||||| || |  ||||| | |||||| || ||||||||| ||||||| |||||||||| | | |||  |||    
T  6260282 ttttttcttataaaatgatgttctataaaatataaatattgacaaatagctatttattacataaaaaaagatagtttatttataaaattatgaaggaaga 6260381  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||| ||||||||| | |||  |  ||||||||||||||||||    
T  6260382 gtaccggtacacctcattttatgagtgtaccgtagaagttccc 6260424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 13795414 - 13795272
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgag- 106  Q
    |||||||||||| |||||| |||| |||||||||| || |||||||| | || ||| || |||||||| | |||||||||||| | |  | |||   ||     
T  13795414 gttttttcttatgaaatgacatttcctaaaatataaatatcaacaaatagctctttattccataaaaa-taatagttaatttaaagatttttaaagtagg 13795316  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||  ||||||||||||||||||| |||||||||||||||||||    
T  13795315 agtatcggtacaccttaatttgcgg-tgtaccgtagaagttccca 13795272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 37431490 - 37431411
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    |||||||||| |||||| ||||||||||||||| || |||||||| | || ||| ||||||| ||||| ||||||||||||    
T  37431490 tttttcttatgaaatgacattttctaaaatataaatatcaacaaatagctctttatttcata-aaaataatagttaattta 37431411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 36428048 - 36427905
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaat-gtaagcgag 106  Q
    |||||||||||| |||| || || | ||||||||| ||||  | ||| |  ||||| ||||| |||||||||| |||||||||||||| |  | ||| ||    
T  36428048 gttttttcttatgaaataatgttctataaaatataaatgttgataaatagttatttatttcacaaaaaatgatcgttaatttataaaattattgagcaag 36427949  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||| ||||||||| | |||| |  ||||||||||||||||||    
T  36427948 agtaccggtacacctcactttgtgagtgtaccgtagaagttccc 36427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 35682359 - 35682440
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttat 91  Q
    ||||||||||| |||||||||||| ||||||||| || |||||| | | || ||| |||||| ||||||||||| ||||||||    
T  35682359 ttttttcttatgaaatgatattttttaaaatataaatatcaacatatagctctttatttcat-aaaaatgataggtaatttat 35682440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 40563258 - 40563116
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    |||||||||||| ||||||| || | ||||||||| ||||  ||||| |  ||||| ||||| | |||||||| |||||||||||||| | | |||| ||    
T  40563258 gttttttcttatgaaatgatgttctataaaatataaatgttgacaaataattatttatttcacacaaaatgatcgttaatttataaaattatgaagcaag 40563159  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    ||||  ||||||||| | |||  |  |||||||||||||||||    
T  40563158 agtatcggtacacctcattttatgagtgtaccgtagaagttcc 40563116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 27117980 - 27118060
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    |||||||||||||||||| ||||||||||||||| || |||| ||| | || ||| || ||| |||||| ||||||||||||    
T  27117980 ttttttcttataaaatgacattttctaaaatataaatatcaataaataactctttattccat-aaaaataatagttaattta 27118060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 39816646 - 39816506
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||| | ||||||||| ||||  | ||| |  ||||| ||| |  ||||||||| |||||||||||||| | | |||| |||    
T  39816646 ttttttcttatgaaatgatattctataaaatataaatgttgataaatagttatttattt-aacaaaaatgatcgttaatttataaaattatgaagcaaga 39816548  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||| ||||||||| | |||| |  |||||||||||||||||    
T  39816547 gtaccggtacacctcactttgtgagtgtaccgtagaagttcc 39816506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 13589005 - 13588922
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| |||||||||||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  13589005 tttttcttatgaaatgatattttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 13588922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 35817491 - 35817412
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatt 88  Q
    |||||| ||||| |||||||||||||||||||||| || |||||||| | |  ||| ||||||| ||||| ||||||||||    
T  35817491 gtttttccttatgaaatgatattttctaaaatataaatatcaacaaatagcattttatttcata-aaaattatagttaatt 35817412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 39041446 - 39041382
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||| | |||||||||||||||||||||| ||| | ||||| | |||||| ||||||||||    
T  39041446 tttttcttgtgaaatgatattttctaaaatataaatgccgacaaataactatttatttcataaaa 39041382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 40585003 - 40584939
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||||| |||||||||||||||||||||| ||| | ||||| | |||||| | ||||||||    
T  40585003 tttttcttatgaaatgatattttctaaaatataaatgccgacaaataactatttatctcataaaa 40584939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 3425133 - 3425090
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||    
T  3425133 gagtaccggtacactttaatttgcgggtgtaccgtagaagttcc 3425090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 34259803 - 34259890
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaa 95  Q
    |||||||||||| ||||||| || | ||||||||| || |  ||||| |  ||||| || ||||||||||||| ||||||||||||||    
T  34259803 gttttttcttatgaaatgatgttctataaaatataaatattgacaaatagttatttattacataaaaaatgatcgttaatttataaaa 34259890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 148
Target Start/End: Complemental strand, 479766 - 479676
Alignment:
Q  59 tatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagagtactggtacaccttaatttgcggatgtaccgtagaagttc 148  Q
    |||||||| ||| ||||||||| |||||||| ||||| | | ||||||||||||  |||||||| | |||| |  ||||||||||||||||    
T  479766 tatttcttacatgaaaaatgatcgttaatttgtaaaattatgaagcgagagtaccagtacacctcactttgtgagtgtaccgtagaagttc 479676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 10400841 - 10400704
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    |||||||| | |||| ||||||||||||||||| ||| | ||||| | |||||| |||||| |||| |||| |||| |||||| |  | | |||| ||||    
T  10400841 tttttcttctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcat-aaaattgatcgttagtttatagatttatgaagcaagag 10400743  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagtt 147  Q
    ||||| ||||||| ||||| |  |||||| |||||||||    
T  10400742 tactgatacacctcaatttacaaatgtactgtagaagtt 10400704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 14054677 - 14054711
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  14054677 gttttttcttataaaataatattttctaaaatata 14054711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 31588500 - 31588643
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||||||||||||||||||| || |  ||||| |  | ||| ||||||  ||||||||  ||||||||||||  | | || | | |    
T  31588500 ttttttcttatgaaatgatattttctaaaatataaatattgacaaatagttttttatttcat--aaaatgatcattaatttataaatttatgaaacaaaa 31588597  T
Q  108 gtactggtacaccttaatttgcg-gatgtaccgtagaagttcccat 152  Q
    |||| ||||||||| |||||| | | ||||||||||||||||||||    
T  31588598 gtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccat 31588643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 32092345 - 32092379
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    ||||||||||||||||| |||||||||||||||||    
T  32092345 gttttttcttataaaataatattttctaaaatata 32092379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 36156107 - 36156244
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgagag 108  Q
    |||||||| | |||| ||||||||||||||||| ||| | ||||| | |||||| |||||| |||| |||| |||| |||||| |  | | |||| ||||    
T  36156107 tttttcttctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcat-aaaattgatcgttagtttatagatttataaagcaagag 36156205  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagtt 147  Q
    ||| ||||||||| ||||| ||  ||||| |||||||||    
T  36156206 taccggtacacctcaatttacgagtgtactgtagaagtt 36156244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 12334572 - 12334657
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    ||||||||||| ||||||| ||   ||||||||| || |  ||||| | |||||| || ||||||||||||| |||||||||||||    
T  12334572 ttttttcttatgaaatgatgttccataaaatataaatattgacaaatagctatttattacataaaaaatgatcgttaatttataaa 12334657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 21051462 - 21051382
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaattta 90  Q
    ||||||||||| |||||| ||||||||| ||||| || |||||||| | || ||| || ||| |||||| ||||||||||||    
T  21051462 ttttttcttatgaaatgacattttctaagatataaatatcaacaaatagctctttattccat-aaaaataatagttaattta 21051382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 5512727 - 5512675
Alignment:
Q  106 gagtactggtacaccttaatttgcg-gatgtaccgtagaagttcccatatttt 157  Q
    |||||| ||||||||| |||||| | | |||||||||||||||||||||||||    
T  5512727 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccatatttt 5512675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 10453546 - 10453606
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcat 70  Q
    |||||||||| ||||||| |||||||||||||| || | |||||| |||| ||| ||||||    
T  10453546 tttttcttatgaaatgatgttttctaaaatataaatattaacaaatacctttttatttcat 10453606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 15264308 - 15264352
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaa 53  Q
    ||||||||||| |||| ||||||||||||||||| | ||||||||    
T  15264308 ttttttcttatgaaataatattttctaaaatataaaagtcaacaa 15264352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 19189373 - 19189409
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatat 45  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  19189373 ttttttcttgtaaaatgatgttttctaaaatatatat 19189409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 24431940 - 24431876
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||| | |||| ||||||||||||||| | ||||| ||||| | |||||| ||||||||||    
T  24431940 tttttcttctgaaatcatattttctaaaatagaaatgtcgacaaataactatttatttcataaaa 24431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 28332484 - 28332528
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| |||||||||||||||||   ||||||||||||||||||    
T  28332484 gagtaccggtacaccttaatttgcaagtgtaccgtagaagttccc 28332528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 28770087 - 28770004
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaa 94  Q
    |||||||||| ||||||| |||||||||||||| || |  ||||| |||| ||| ||||||  ||| |||| |||||||||||||    
T  28770087 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcat-taaagtgatcgttaatttataaa 28770004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 32455562 - 32455626
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||||| |||||||||||||| | ||||| ||| | ||||| | |||||| ||||||||||    
T  32455562 tttttcttatgaaatgatattttctgagatataaatgccgacaaataactatttatttcataaaa 32455626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 43059625 - 43059561
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaa 74  Q
    |||||||||| |||||||||||||||| ||||| ||| | ||||| | ||| || ||||||||||    
T  43059625 tttttcttatgaaatgatattttctaagatataaatgccgacaaataactaattatttcataaaa 43059561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 6510 - 6644
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgtaagcgagagtactggt 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||| ||  | |||||||||||||||| ||||||||| |||    
T  6510 ttataaaatgatattttgtaaaatatatatgtcaacaaacacctatttctgtcataaggaatggtaagtgatttataaaaatgtaaccgagagtaccggt 6609  T
Q  116 acaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||||||||| |||||| ||||||||||||||||||    
T  6610 acaccttaaattgcgggtgtaccgtagaagttccc 6644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 36744 - 36647
Alignment:
Q  16 ttataaaatgatattttctaaaatatatatgtcaacaaacaccta-tttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtac 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36744 ttataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtac 36647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 29509 - 29657
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    |||||||||| ||||||| ||||||||||||||| || |||||||| | || ||| || |||||||||| |||||||||||| | |  | | |||   ||    
T  29509 ttttttcttacaaaatgacattttctaaaatataaatatcaacaaatagctctttattccataaaaaataatagttaatttaaagatttttgaagtagga 29608  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcccatattt 156  Q
    |||| ||||||||||||||||| | ||||||||||| |||||| |||||    
T  29609 gtaccggtacaccttaatttgcaggtgtaccgtagatgttcccttattt 29657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 2285 - 2425
Alignment:
Q  9 ttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgaga 107  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||| | || ||| || | | |||||| |||||||||||| | |  | | |||   ||    
T  2285 ttttttcttatgaaatgacattttctaaaatatatatatcaacaaatagctctttattccgt-aaaaataatagttaatttaaagatttttgaagtagga 2383  T
Q  108 gtactggtacaccttaatttgcggatgtaccgtagaagttcc 149  Q
    |||| ||||||||||||||||||| |||| ||||||| ||||    
T  2384 gtaccggtacaccttaatttgcgggtgtatcgtagaaattcc 2425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 96 - 240
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaatgt-aagcgag 106  Q
    ||||||| |||| ||||||| || | ||||||||| || |  ||||| | |||||| || ||||||||||||| |||||||||||||| | | ||||       
T  96 gtttttttttatgaaatgatgttatataaaatataaatattgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaga 195  T
Q  107 agtactggtacaccttaatttgcggatgtaccgtagaagttccca 151  Q
    ||||| ||||||||| | |||| |  |||||||||||||||||||    
T  196 agtaccggtacacctcactttgtgagtgtaccgtagaagttccca 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 6310 - 6266
Alignment:
Q  106 gagtactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||    
T  6310 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 6266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 45339 - 45479
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaat-gtaagcgagag 108  Q
    |||||||||| ||||||| |||||| ||||||| ||| | ||||| | |||||| ||||||||||  |||| ||||||||||| |  | |||||  ||||    
T  45339 tttttcttatgaaatgatgttttctgaaatataaatgccgacaaataactatttatttcataaaat-tgatcgttaatttatagatttagtaagtaagag 45437  T
Q  109 tactggtacaccttaatttgcggatgtaccgtagaagttccc 150  Q
    ||| |||||||| |||||| ||  ||||  ||||||||||||    
T  45438 taccggtacaccataatttacgagtgtagtgtagaagttccc 45479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 13869 - 13901
Alignment:
Q  10 tttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||||||||||||||||    
T  13869 tttttcttataaaatgatattttctaaaatata 13901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0841 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0841
Description:

Target: scaffold0841; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 3198 - 3164
Alignment:
Q  8 gttttttcttataaaatgatattttctaaaatata 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  3198 gttttttcttataaaatgatgttttctaaaatata 3164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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