View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4648_high_13 (Length: 263)
Name: NF4648_high_13
Description: NF4648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4648_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 21 - 254
Target Start/End: Complemental strand, 32868221 - 32867988
Alignment:
| Q |
21 |
gaacaacaatgaatagggaaatgaggaaaaataaatgaagctctcgagtaactaactaaaccaaagacaaagaggattgggaaacaagcagcttggaaca |
120 |
Q |
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| T |
32868221 |
gaacaacaatgaatagggaaatgaggaaaaataaatgaagctctcgagtaactaactaaaccaaagacaaagaggattgggaaacaagcagcttggaaca |
32868122 |
T |
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| Q |
121 |
aaagtggtttggttcgtgttagagaagacacgttttgtgtaaataacaatcgcttaaaaggagcgtagctttataactcctcacaccacgcagtcacgca |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32868121 |
aaagtggtttggttcgtgttagagaagacacgttttgtgtaaataacaatcgcttaaaaggagcgtagctttataactcctcacaccacgcagtcacgca |
32868022 |
T |
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| Q |
221 |
cacacgcacgcgccgtagtttcttcttctctctc |
254 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
32868021 |
cacacgcacgcgccgtagtttcttcttctctctc |
32867988 |
T |
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