View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4648_high_20 (Length: 217)

Name: NF4648_high_20
Description: NF4648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4648_high_20
NF4648_high_20
[»] chr7 (39 HSPs)
chr7 (1-212)||(2413934-2414145)
chr7 (141-213)||(16567313-16567385)
chr7 (141-213)||(16598277-16598349)
chr7 (139-213)||(18157187-18157261)
chr7 (142-212)||(41966330-41966400)
chr7 (144-213)||(17500697-17500766)
chr7 (144-213)||(17552448-17552517)
chr7 (144-212)||(3247069-3247137)
chr7 (140-216)||(28824499-28824575)
chr7 (141-217)||(47424983-47425059)
chr7 (143-217)||(19426579-19426653)
chr7 (143-213)||(43079634-43079704)
chr7 (144-213)||(26153646-26153714)
chr7 (144-217)||(31982057-31982130)
chr7 (144-217)||(40842405-40842478)
chr7 (145-217)||(2790178-2790250)
chr7 (142-210)||(38023429-38023497)
chr7 (144-212)||(45607024-45607092)
chr7 (144-216)||(48866929-48867001)
chr7 (142-217)||(7990077-7990152)
chr7 (142-212)||(35600669-35600740)
chr7 (143-217)||(21752657-21752731)
chr7 (143-212)||(30769664-30769731)
chr7 (144-213)||(31364886-31364955)
chr7 (144-209)||(42431723-42431788)
chr7 (144-213)||(43107610-43107679)
chr7 (140-213)||(47644701-47644774)
chr7 (137-212)||(155984-156060)
chr7 (147-215)||(5198757-5198824)
chr7 (142-213)||(25332500-25332572)
chr7 (138-166)||(27704429-27704457)
chr7 (142-174)||(27778077-27778109)
chr7 (141-217)||(33684677-33684753)
chr7 (145-209)||(37325825-37325889)
chr7 (141-213)||(37392040-37392112)
chr7 (144-212)||(42663084-42663152)
chr7 (145-212)||(44216143-44216211)
chr7 (145-213)||(44564725-44564792)
chr7 (143-215)||(46651671-46651743)
[»] chr3 (53 HSPs)
chr3 (141-217)||(35272024-35272100)
chr3 (147-217)||(14207378-14207448)
chr3 (147-217)||(14215126-14215196)
chr3 (144-213)||(51672863-51672932)
chr3 (143-217)||(41877609-41877683)
chr3 (140-213)||(43499564-43499636)
chr3 (140-213)||(55344298-55344371)
chr3 (141-217)||(47849669-47849745)
chr3 (141-217)||(49196693-49196769)
chr3 (144-212)||(51464275-51464343)
chr3 (141-216)||(26279881-26279956)
chr3 (143-213)||(36799397-36799467)
chr3 (144-213)||(1295332-1295401)
chr3 (140-213)||(1901928-1902001)
chr3 (140-213)||(1911374-1911447)
chr3 (140-213)||(7867713-7867786)
chr3 (144-217)||(9027873-9027946)
chr3 (144-217)||(14957836-14957909)
chr3 (141-213)||(29800551-29800623)
chr3 (141-217)||(51410803-51410879)
chr3 (142-217)||(108429-108504)
chr3 (141-212)||(48945844-48945915)
chr3 (143-217)||(29705902-29705976)
chr3 (143-213)||(46315957-46316027)
chr3 (142-212)||(46473126-46473196)
chr3 (144-217)||(32457753-32457826)
chr3 (136-209)||(38944147-38944220)
chr3 (141-188)||(18169154-18169201)
chr3 (141-216)||(22813069-22813144)
chr3 (142-217)||(52727446-52727521)
chr3 (143-217)||(11173457-11173531)
chr3 (147-213)||(34733293-34733359)
chr3 (143-213)||(35425674-35425744)
chr3 (147-217)||(39540238-39540308)
chr3 (143-213)||(43900759-43900829)
chr3 (143-213)||(44334803-44334873)
chr3 (141-211)||(45528946-45529016)
chr3 (135-212)||(50559214-50559292)
chr3 (144-213)||(20380891-20380960)
chr3 (148-213)||(25959544-25959609)
chr3 (143-212)||(30796617-30796686)
chr3 (144-217)||(37303072-37303145)
chr3 (144-217)||(41309000-41309073)
chr3 (142-211)||(43176200-43176269)
chr3 (144-213)||(50294114-50294183)
chr3 (143-212)||(51032627-51032696)
chr3 (140-188)||(5398914-5398962)
chr3 (153-217)||(21217310-21217374)
chr3 (141-213)||(27198162-27198234)
chr3 (135-163)||(38359358-38359386)
chr3 (140-212)||(47988488-47988560)
chr3 (140-212)||(47997775-47997847)
chr3 (140-212)||(48007062-48007134)
[»] chr4 (52 HSPs)
chr4 (142-213)||(54800996-54801067)
chr4 (143-217)||(34116538-34116612)
chr4 (135-212)||(51318694-51318771)
chr4 (144-217)||(51039114-51039187)
chr4 (142-216)||(4896499-4896573)
chr4 (143-212)||(10994155-10994224)
chr4 (143-212)||(22257199-22257268)
chr4 (144-217)||(46794499-46794572)
chr4 (144-217)||(52392223-52392296)
chr4 (144-212)||(1031755-1031823)
chr4 (136-212)||(34974446-34974522)
chr4 (143-215)||(35017152-35017224)
chr4 (142-213)||(10096744-10096815)
chr4 (142-209)||(39449171-39449237)
chr4 (141-215)||(36444395-36444469)
chr4 (144-217)||(11064087-11064160)
chr4 (144-217)||(23347775-23347848)
chr4 (144-217)||(36123036-36123108)
chr4 (140-217)||(51296187-51296264)
chr4 (140-217)||(53583126-53583203)
chr4 (144-212)||(25725697-25725765)
chr4 (144-212)||(31240648-31240716)
chr4 (140-212)||(33820339-33820411)
chr4 (143-207)||(40629348-40629412)
chr4 (145-209)||(45548790-45548854)
chr4 (141-212)||(41952825-41952896)
chr4 (142-213)||(42853937-42854008)
chr4 (142-213)||(46566927-46566998)
chr4 (142-217)||(56379390-56379465)
chr4 (143-217)||(3664758-3664832)
chr4 (142-212)||(6953391-6953461)
chr4 (142-212)||(12241056-12241126)
chr4 (144-217)||(28203392-28203468)
chr4 (143-213)||(31804331-31804401)
chr4 (143-212)||(9472516-9472585)
chr4 (144-213)||(18880785-18880854)
chr4 (144-217)||(25523196-25523269)
chr4 (144-213)||(35332706-35332775)
chr4 (143-212)||(38133979-38134048)
chr4 (143-212)||(40409169-40409238)
chr4 (144-217)||(44165909-44165982)
chr4 (139-212)||(48722064-48722137)
chr4 (143-212)||(53781840-53781908)
chr4 (144-192)||(169525-169573)
chr4 (144-212)||(3968885-3968953)
chr4 (144-212)||(15596396-15596464)
chr4 (144-212)||(22071496-22071564)
chr4 (141-213)||(23094373-23094445)
chr4 (141-213)||(44272812-44272884)
chr4 (137-217)||(49194877-49194956)
chr4 (141-213)||(51397873-51397945)
chr4 (145-217)||(52224094-52224166)
[»] chr8 (39 HSPs)
chr8 (139-217)||(42047330-42047408)
chr8 (142-217)||(21418590-21418665)
chr8 (136-213)||(6004936-6005013)
chr8 (140-217)||(28927677-28927754)
chr8 (140-217)||(45101392-45101469)
chr8 (136-217)||(7596889-7596971)
chr8 (139-213)||(7678727-7678801)
chr8 (139-217)||(34473944-34474022)
chr8 (142-212)||(39021446-39021516)
chr8 (140-209)||(32725786-32725855)
chr8 (136-213)||(44380616-44380693)
chr8 (143-215)||(8074724-8074796)
chr8 (144-212)||(21273713-21273781)
chr8 (134-209)||(23952484-23952559)
chr8 (142-217)||(26294187-26294262)
chr8 (142-217)||(26307444-26307519)
chr8 (142-212)||(8841028-8841098)
chr8 (147-217)||(27836183-27836253)
chr8 (139-213)||(29910214-29910288)
chr8 (142-188)||(40842012-40842058)
chr8 (142-212)||(42012593-42012663)
chr8 (143-212)||(6161947-6162016)
chr8 (144-213)||(6849263-6849332)
chr8 (139-212)||(9738696-9738769)
chr8 (140-213)||(12045655-12045728)
chr8 (141-213)||(33863250-33863322)
chr8 (142-217)||(37033099-37033174)
chr8 (137-212)||(42716313-42716388)
chr8 (139-210)||(44090882-44090953)
chr8 (140-213)||(2621781-2621855)
chr8 (143-217)||(3988904-3988978)
chr8 (142-212)||(22852842-22852912)
chr8 (144-206)||(28623120-28623182)
chr8 (144-217)||(41344667-41344740)
chr8 (144-217)||(42543477-42543549)
chr8 (142-213)||(6440079-6440151)
chr8 (144-212)||(22767132-22767200)
chr8 (137-165)||(33301982-33302010)
chr8 (144-212)||(43873694-43873762)
[»] chr2 (35 HSPs)
chr2 (141-217)||(34139036-34139112)
chr2 (130-217)||(1889133-1889220)
chr2 (144-212)||(3091741-3091809)
chr2 (140-217)||(36132970-36133047)
chr2 (142-213)||(35792458-35792529)
chr2 (143-213)||(2308324-2308394)
chr2 (143-217)||(13711060-13711134)
chr2 (139-212)||(10749682-10749755)
chr2 (140-217)||(31296843-31296920)
chr2 (140-212)||(4738575-4738647)
chr2 (141-213)||(8352832-8352904)
chr2 (140-212)||(26321700-26321772)
chr2 (144-215)||(12600048-12600119)
chr2 (142-217)||(14140335-14140410)
chr2 (147-210)||(30339874-30339937)
chr2 (135-213)||(30856797-30856876)
chr2 (143-217)||(6365185-6365259)
chr2 (143-213)||(13553146-13553216)
chr2 (142-212)||(33296074-33296144)
chr2 (140-209)||(26321871-26321940)
chr2 (144-217)||(32688542-32688615)
chr2 (144-217)||(36435681-36435754)
chr2 (144-212)||(5455456-5455524)
chr2 (147-215)||(43665625-43665693)
chr2 (142-213)||(15283252-15283323)
chr2 (142-213)||(5167742-5167815)
chr2 (143-209)||(6884909-6884975)
chr2 (142-212)||(11229324-11229394)
chr2 (144-213)||(28165129-28165198)
chr2 (140-217)||(41353495-41353572)
chr2 (144-217)||(7428433-7428502)
chr2 (141-213)||(7497993-7498065)
chr2 (144-212)||(11980651-11980719)
chr2 (144-188)||(39247490-39247534)
chr2 (153-217)||(41056820-41056884)
[»] chr6 (18 HSPs)
chr6 (143-212)||(10521125-10521194)
chr6 (144-217)||(32457250-32457323)
chr6 (142-217)||(29383555-29383630)
chr6 (143-213)||(8173314-8173384)
chr6 (141-212)||(30796078-30796149)
chr6 (142-217)||(31480832-31480907)
chr6 (142-217)||(32253778-32253853)
chr6 (140-213)||(11742984-11743057)
chr6 (140-213)||(23633325-23633398)
chr6 (145-209)||(6435037-6435101)
chr6 (141-213)||(11785352-11785424)
chr6 (142-213)||(3088971-3089042)
chr6 (143-217)||(9954547-9954621)
chr6 (140-174)||(12441534-12441568)
chr6 (144-217)||(8395342-8395415)
chr6 (140-217)||(32853142-32853219)
chr6 (141-209)||(237404-237472)
chr6 (141-213)||(15722505-15722577)
[»] chr5 (35 HSPs)
chr5 (135-217)||(125083-125165)
chr5 (135-212)||(10232490-10232567)
chr5 (141-217)||(28811426-28811501)
chr5 (143-213)||(25364839-25364908)
chr5 (135-217)||(38500934-38501016)
chr5 (144-217)||(34381012-34381085)
chr5 (144-212)||(12779609-12779677)
chr5 (137-217)||(40223783-40223863)
chr5 (142-217)||(19376130-19376205)
chr5 (141-212)||(36572688-36572759)
chr5 (142-212)||(23991137-23991207)
chr5 (143-213)||(36713180-36713250)
chr5 (143-212)||(8897381-8897450)
chr5 (144-217)||(39595272-39595345)
chr5 (144-212)||(6538870-6538938)
chr5 (144-212)||(12718383-12718451)
chr5 (146-213)||(36624320-36624387)
chr5 (143-213)||(582869-582939)
chr5 (142-212)||(1774286-1774356)
chr5 (141-215)||(9714136-9714210)
chr5 (147-217)||(19827372-19827442)
chr5 (143-213)||(27340868-27340938)
chr5 (143-212)||(8787159-8787228)
chr5 (144-213)||(9277613-9277682)
chr5 (140-217)||(14073048-14073124)
chr5 (144-213)||(15639385-15639454)
chr5 (142-210)||(32872902-32872971)
chr5 (141-182)||(35165676-35165717)
chr5 (144-212)||(12661950-12662018)
chr5 (143-210)||(17097806-17097874)
chr5 (141-213)||(18638827-18638899)
chr5 (144-212)||(19127124-19127192)
chr5 (143-215)||(29402181-29402253)
chr5 (141-213)||(35098734-35098806)
chr5 (140-212)||(42909715-42909787)
[»] chr1 (33 HSPs)
chr1 (140-217)||(366653-366730)
chr1 (142-217)||(37843430-37843505)
chr1 (142-217)||(43755676-43755751)
chr1 (142-217)||(50226877-50226952)
chr1 (143-212)||(49425737-49425805)
chr1 (143-215)||(8905727-8905799)
chr1 (144-212)||(15061845-15061913)
chr1 (141-213)||(27352627-27352699)
chr1 (142-217)||(25302641-25302716)
chr1 (142-217)||(45042259-45042334)
chr1 (143-217)||(31436819-31436893)
chr1 (144-213)||(8464515-8464584)
chr1 (139-212)||(12717630-12717703)
chr1 (140-209)||(18610769-18610838)
chr1 (144-217)||(28253015-28253088)
chr1 (144-213)||(32821635-32821704)
chr1 (144-216)||(2362356-2362428)
chr1 (141-181)||(10384208-10384248)
chr1 (140-212)||(15182586-15182658)
chr1 (145-212)||(9882662-9882729)
chr1 (138-213)||(38019506-38019581)
chr1 (142-213)||(52369113-52369184)
chr1 (142-212)||(24158648-24158718)
chr1 (139-212)||(12708085-12708158)
chr1 (147-208)||(14247667-14247728)
chr1 (143-212)||(30439249-30439318)
chr1 (144-213)||(30687052-30687121)
chr1 (143-212)||(31427960-31428029)
chr1 (144-213)||(45350097-45350166)
chr1 (144-213)||(50528059-50528128)
chr1 (144-212)||(9445108-9445176)
chr1 (137-169)||(25061748-25061780)
chr1 (142-178)||(26585210-26585246)
[»] scaffold0018 (1 HSPs)
scaffold0018 (141-217)||(35999-36075)
[»] scaffold0154 (1 HSPs)
scaffold0154 (143-213)||(4314-4384)
[»] scaffold0508 (1 HSPs)
scaffold0508 (144-212)||(11539-11607)
[»] scaffold0011 (1 HSPs)
scaffold0011 (141-217)||(219662-219738)
[»] scaffold0131 (1 HSPs)
scaffold0131 (145-212)||(15537-15604)
[»] scaffold0026 (1 HSPs)
scaffold0026 (144-217)||(113625-113698)
[»] scaffold0001 (1 HSPs)
scaffold0001 (144-212)||(395861-395929)
[»] scaffold0618 (1 HSPs)
scaffold0618 (139-210)||(8957-9028)
[»] scaffold0330 (1 HSPs)
scaffold0330 (138-192)||(4035-4090)
[»] scaffold0041 (1 HSPs)
scaffold0041 (147-217)||(34411-34481)
[»] scaffold0014 (1 HSPs)
scaffold0014 (139-213)||(199261-199335)
[»] scaffold0002 (1 HSPs)
scaffold0002 (144-210)||(440718-440784)
[»] scaffold0087 (1 HSPs)
scaffold0087 (142-215)||(27063-27136)
[»] scaffold0057 (1 HSPs)
scaffold0057 (140-217)||(38875-38952)
[»] scaffold0036 (1 HSPs)
scaffold0036 (140-217)||(18000-18077)
[»] scaffold0076 (1 HSPs)
scaffold0076 (142-217)||(11208-11281)
[»] scaffold0032 (1 HSPs)
scaffold0032 (143-211)||(17435-17503)


Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-100; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 2413934 - 2414145
Alignment:
Q  1 gaaccctcaaggagcttgacggggcctcttccctttgatttcctgactctgctacattatctattgtctccaaatttaagatgtttgctaacaaccgttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2413934 gaaccctcaaggagcttgacggggcctcttccctttgatttcctggctctgctacattatctattgtctccaaatttaagatgtttgctaacaaccgttt 2414033  T
Q  101 tgtatgaatagtcgaatagtataaattacgacataaaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||| ||||||| |||    
T  2414034 tgtatgaatagtcgaatagtataaattacgacataaaataaaagagaaatgatatttatacaactacttcgtgacaattttttgacaactttatatctca 2414133  T
Q  201 tactcacattat 212  Q
    ||||||||||||    
T  2414134 tactcacattat 2414145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 16567313 - 16567385
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||| | ||  | ||||| ||||||||||||| | ||||||||||||||||||    
T  16567313 aaagagaaatgatatttgtacaaccattttattataactttttgacaattttctctttcatactcacattata 16567385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 16598349 - 16598277
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||| | ||  | ||||| ||||||||||||| | ||||||||||||||||||    
T  16598349 aaagagaaatgatatttgtacaaccattttattataactttttgacaattttctctttcatactcacattata 16598277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 18157261 - 18157187
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||| |||||||||||||||| |||| |||||||  ||| ||||||||| | | ||||||||||||||||    
T  18157261 taaaagagacatgatatttgtacaaccactttgtgataatttttagacaattttctctctcatactcacattata 18157187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 41966330 - 41966400
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||| |||| |||| ||  ||||||||| ||| ||||||||||||| |||||    
T  41966330 aagagaaatgatatttgtacaaccactttgtgacaattttttgacaactttctatttcatactcatattat 41966400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 17500697 - 17500766
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||| ||||  | ||||| ||||||||| ||||| | ||||||||||||||||    
T  17500697 gagaaatgatatttgtacaaccactttattataactttttgacaactttatctctcatactcacattata 17500766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 17552517 - 17552448
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||| ||||  | ||||| ||||||||| ||||| | ||||||||||||||||    
T  17552517 gagaaatgatatttgtacaaccactttattataactttttgacaactttatctctcatactcacattata 17552448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 3247069 - 3247137
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||  | || |||| ||  ||||||||||||| |||||||||||||||||||    
T  3247069 gagaaatgatatttgtacaatcatttagtgacaattttttgacaattttctatttcatactcacattat 3247137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 28824499 - 28824575
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactc 216  Q
    ||||||||||||||||||||||||| ||||  ||| ||| ||||||||| ||| | | ||||| |||||||||||||    
T  28824499 aaaagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatattcacattatactc 28824575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 47425059 - 47424983
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||| |||||||||||||| | | |||| ||||||| |||||||||||||| | | ||||||||||||||| ||||    
T  47425059 aaagataaatgatatttgtatatccactttgtgataatcttttgacaattttctctctcatactcacattatcctct 47424983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 19426579 - 19426653
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||| | || |||| ||| ||||||||| ||| | | ||||||||||||||| ||||    
T  19426579 agagaaatgatatttgtacaaccattttgtgacaactttttgacaactttctctctcatactcacattatcctct 19426653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 43079704 - 43079634
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||| |||| |||||||  ||| ||||| ||| | | ||||||||||||||||    
T  43079704 agagaaatgatatttgtacaaccactttgtgataatttttggacaactttctctctcatactcacattata 43079634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 26153646 - 26153714
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||| ||  ||| || |||||||||||||| | | ||||||||||||||||    
T  26153646 gagaaatgatatttgtacaactattttatgacaa-cttttgacaattttctctctcatactcacattata 26153714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 31982057 - 31982130
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| |||| || ||||||| || |||   | ||||||||||||||||||||    
T  31982057 gagaaatgatatttgtacaaccactttgtgacaatcttttgataacttttgctctcatactcacattatactct 31982130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 40842405 - 40842478
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||| | |||| |||| || |||||||||| ||| | | ||||||||||||||| ||||    
T  40842405 gagaaatgatatttgtacatccactttgtgacaatcttttgacaactttctctctcatactcacattatcctct 40842478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 2790178 - 2790250
Alignment:
Q  145 agaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||| |||| || | ||  ||||||||| ||| | | ||||||||||||||||||||    
T  2790178 agaaatgatatttgtacaaccactttgtaacaattttttgacaactttctctctcatactcacattatactct 2790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 38023497 - 38023429
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacatt 210  Q
    ||||||||||||||||||||||| |||| |||||||  ||| ||||| ||| | | |||||||||||||    
T  38023497 aagagaaatgatatttgtacaaccactttgtgataatttttagacaactttctctctcatactcacatt 38023429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 45607024 - 45607092
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||| |||||| |||| ||| | ||||||| ||| | | |||||||||||||||    
T  45607024 gagaaatgatatttgtacatctactttgtgacaacttcttgacaactttctctctcatactcacattat 45607092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 48867001 - 48866929
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactc 216  Q
    ||||||||||||||||||| | |||| |||| ||| ||||||||| ||| | |  ||||||||||||||||||    
T  48867001 gagaaatgatatttgtacagccactttgtgacaactttttgacaactttctctcacatactcacattatactc 48866929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 7990077 - 7990152
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| ||| ||  ||||||  |||||| |||||| | | | ||||||||||||||||||    
T  7990077 aagagaaatgatatttgtacatctattttatgataattttttgataattttctctcttatactcacattatactct 7990152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 35600669 - 35600740
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttt-tgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||  ||||| | || |||| ||||| | |||||||||||| |||||||||||||||||    
T  35600669 aagagaaatgatattttgacaaccattttgtgacaacctatgtgacaattttatctttcatactcacattat 35600740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 21752657 - 21752731
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||  ||||  | | ||| ||||||||| ||||| | ||||||||||||||| ||||    
T  21752657 agagaaatgatatttgtacaatcactttctcacaactttttgacaactttatctctcatactcacattattctct 21752731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 30769731 - 30769664
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||||| ||  | | ||| ||||||||| ||||| | |||||||||||||||    
T  30769731 agagaaatgatatttgtacaactattt--taacaactttttgacaactttatctctcatactcacattat 30769664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 31364955 - 31364886
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||| || ||||  | | ||  ||||||||||||| | ||||||||||||||||||    
T  31364955 gagaaatgatatttgtacgaccactttattacaattttttgacaattttctctttcatactcacattata 31364886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 42431723 - 42431788
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    |||||||||||||| |||| ||| || |||||||| |||  |||||||| ||| ||||||||||||    
T  42431723 gagaaatgatatttatacacctaatttgtgataacttttgtacaattttctatatcatactcacat 42431788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 43107610 - 43107679
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||| ||  ||||| ||| ||| ||| ||||| ||||| | ||||||||||||||||    
T  43107610 gagaaatgatatttgtaaaatcacttcatgacaacttttagacaactttatctctcatactcacattata 43107679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 47644701 - 47644774
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||| |||||||||||||||||| ||||  | ||||  ||||||||| ||| | | ||||||||||||||||    
T  47644701 aaaagataaatgatatttgtacaaccactttattataattttttgacaactttctctctcatactcacattata 47644774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 156060 - 155984
Alignment:
Q  137 aataaaagagaaatgatatttgtacaactacttcgtgataacct-tttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||||||| | |||| |||| ||| | || ||||| ||| | | |||||||||||||||    
T  156060 aataaaagagaaatgatatttgtacatccactttgtgacaacttcttagacaactttctctctcatactcacattat 155984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 5198824 - 5198757
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    ||||||||||||||||| || || |||| || |||||||||| ||| | ||| ||||||||||||||||    
T  5198824 aaatgatatttgtacaattattt-gtgacaatcttttgacaactttctcttttatactcacattatact 5198757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 25332572 - 25332500
Alignment:
Q  142 aagagaaatgatatttgtacaacta-cttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||| |  ||  ||||||| ||| ||||||||| | ||||||||||| ||||||    
T  25332572 aagagaaatgatatttgtacaaccatttttttgataacttttagacaattttctctttcatactcatattata 25332500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 27704429 - 27704457
Alignment:
Q  138 ataaaagagaaatgatatttgtacaacta 166  Q
    |||||||||||||||||||||||||||||    
T  27704429 ataaaagagaaatgatatttgtacaacta 27704457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 27778077 - 27778109
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtga 174  Q
    |||||||||||||||||||||||||||| ||||    
T  27778077 aagagaaatgatatttgtacaactactttgtga 27778109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 33684677 - 33684753
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||||| ||||  | | ||| |||| |||| ||| | | ||||||||||||||| ||||    
T  33684677 aaagagaaatgatatttgtacaaccactttctcacaacttttttacaactttctctctcatactcacattatcctct 33684753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 37325889 - 37325825
Alignment:
Q  145 agaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    |||||||||||||||||||| | || |||| ||| |||  |||||||| | ||||||||||||||    
T  37325889 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttctctttcatactcacat 37325825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 37392040 - 37392112
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||| | ||  ||| ||| |||  |||| ||||| | ||||||||||||||||    
T  37392040 aaagagaaatgatatttgtacaaccattttttgacaacttttaaacaactttatctctcatactcacattata 37392112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 42663084 - 42663152
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||| | | || |||| ||| ||||||||| | | ||||||||||| |||||||    
T  42663084 gagaaatgatatttgtacatccattttgtgacaactttttgacaactctctatttcatacttacattat 42663152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 44216211 - 44216143
Alignment:
Q  145 agaaatgatatttgtacaactacttc-gtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||| ||||| ||  |||| ||| ||||||||| | | |||||||||||||||||||    
T  44216211 agaaatgatatttgtataactatttttgtgacaactttttgacaactctctatttcatactcacattat 44216143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 44564792 - 44564725
Alignment:
Q  145 agaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||| ||  ||| ||  ||| ||||| ||| ||||||||||||||||||||    
T  44564792 agaaatgatatttgtacaactatttt-tgacaatttttagacaactttttatttcatactcacattata 44564725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 46651671 - 46651743
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    ||||||||||||| |||||||||||||  ||| ||  |||| |||| ||| | | ||||||||||||||||||    
T  46651671 agagaaatgatatatgtacaactactttatgacaattttttaacaactttctctctcatactcacattatact 46651743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 35272024 - 35272100
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||| ||||| ||||||||||| ||||||||||    
T  35272024 aaagagaaatgatatttgtacaaccactttgtgacaaccttttgacaactttatctttcatactcatattatactct 35272100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 14207378 - 14207448
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||| | | ||||||||||||||||||||    
T  14207378 aaatgatatttgtacaaccactttgtgataaccttttgacaactttctctctcatactcacattatactct 14207448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 14215126 - 14215196
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||| | | ||||||||||||||||||||    
T  14215126 aaatgatatttgtacaaccactttgtgataaccttttgacaactttctctctcatactcacattatactct 14215196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 51672863 - 51672932
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||| ||| | ||||||||||||||||||    
T  51672863 gagaaatgatatttgtacatctactttgtgataactttttgacaactttctttttcatactcacattata 51672932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 41877683 - 41877609
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||| |||| |||| | ||||||||||| ||| | | ||||||||||||||||||||    
T  41877683 agagaaatgatatttgtacaaccactttgtgacacccttttgacaactttttctctcatactcacattatactct 41877609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 43499636 - 43499564
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||| ||||  ||||||| ||| ||||||||| | ||||||||||||||||||    
T  43499636 aaaagagaaatgatatttgtacaaccactttatgataacttttggacaattttct-tttcatactcacattata 43499564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 55344371 - 55344298
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||| | || |||||||| | ||||||||||| | |||||||||| |||||||    
T  55344371 aaaagagaaatgatatttgtacaaccattttgtgataacttcttgacaattttctctttcatactcgcattata 55344298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 47849669 - 47849745
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||||| | || |||||||  ||||||||| ||| | || |||||||||||||||||||    
T  47849669 aaagagaaatgatatttgtacaaccattttgtgataattttttgacaactttctcttacatactcacattatactct 47849745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 49196693 - 49196769
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||||| | || |||| ||| || |||||||||| | | ||||||||||||||||||||    
T  49196693 aaagagaaatgatatttgtacaaccattttgtgacaactttgtgacaattttctctctcatactcacattatactct 49196769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 51464343 - 51464275
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| |||| |||| ||| ||||||||| ||||| | |||||||||||||||    
T  51464343 gagaaatgatatttgtacaaccactttgtgacaactttttgacaactttatctctcatactcacattat 51464275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 26279881 - 26279956
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactc 216  Q
    |||||||||||||||||||||||| ||||  ||| ||| ||||||||| ||| | | |||||||||||||||||||    
T  26279881 aaagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacattatactc 26279956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 36799397 - 36799467
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||| ||  ||||||| |||  |||||||||| | ||||||||||||||||    
T  36799397 agagaaatgatatttgtacaactattttttgataacttttaaacaattttatttctcatactcacattata 36799467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 1295332 - 1295401
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||| ||| | | ||||||||||||||||    
T  1295332 gagaaatgatatttgtacaactattttgtgataacttttggacaactttttctctcatactcacattata 1295401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 1902001 - 1901928
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||| |||| |||| ||| ||| ||||| ||| | | ||||||||||||||||    
T  1902001 aaaagagaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacattata 1901928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 1911447 - 1911374
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||| |||| |||| ||| ||| ||||| ||| | | ||||||||||||||||    
T  1911447 aaaagagaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacattata 1911374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 7867786 - 7867713
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||||| || |||| ||| |||  |||||||| | | ||||||||||||||||    
T  7867786 aaaagagaaatgatatttgtacaactattttgtgacaacttttaaacaattttctttctcatactcacattata 7867713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 9027873 - 9027946
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| |||||||| |||||| || ||| | | ||||||||||||||| ||||    
T  9027873 gagaaatgatatttgtacaaccactttgtgataactttttgataactttctctctcatactcacattattctct 9027946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 14957836 - 14957909
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| |||| ||| |||| |||||||| | | ||||| ||||||||||||||    
T  14957836 gagaaatgatatttgtacaaccactttgtgacaactttttaacaattttttctctcatattcacattatactct 14957909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 29800623 - 29800551
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||||||| |||||||  ||| ||||| ||| | | ||||||| ||||||||    
T  29800623 aaagagaaatgatatttgtacaactactttgtgataatttttagacaactttttctctcatacttacattata 29800551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 51410803 - 51410879
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||||| ||||  | | ||| ||||||||||||| | ||||||| ||||||||| ||||    
T  51410803 aaagagaaatgatatttgtacaaccactttctcacaactttttgacaattttctctttcatattcacattatcctct 51410879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 108429 - 108504
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| |||| |||| ||  ||||||||| ||| | | ||||||||||||||| ||||    
T  108429 aagagaaatgatatttgtacaaccactttgtgacaattttttgacaactttctctctcatactcacattatcctct 108504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 48945844 - 48945915
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||||| |||| |||| ||| | ||||||||||| | | ||||| |||||||||    
T  48945844 aaagagaaatgatatttgtacaaccactttgtgacaacttcttgacaattttttctctcatattcacattat 48945915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 29705902 - 29705976
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||| ||||| || || |||||||  |||||| |||||| | ||||||||||||||||| ||||    
T  29705902 agagaaatgatatttatacaattattttgtgataattttttgataattttctctttcatactcacattattctct 29705976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 46316027 - 46315957
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||| ||||  ||| ||| |||||| ||| || | ||||||||||||||||||    
T  46316027 agagaaatgatatttgtacaaccactttatgacaactttttgataatcttctctttcatactcacattata 46315957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 46473126 - 46473196
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||| |||| | || ||| |||| |||||||| | | |||||||||||||||    
T  46473126 aagagaaatgatatttgtacaaccactttgcgacaactttttaacaattttctctctcatactcacattat 46473196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 32457826 - 32457753
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| ||||  ||| ||| || |||||| ||| | | ||||||||||||||||||||    
T  32457826 gagaaatgatatttgtacaaccactttttgacaactttgtgacaactttctctctcatactcacattatactct 32457753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 38944220 - 38944147
Alignment:
Q  136 aaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    |||||| |||||||||||||||||||||||| || |||| ||| |||  |||||||| | | ||||||||||||    
T  38944220 aaataatagagaaatgatatttgtacaactaatttgtgacaacttttgtacaattttctctctcatactcacat 38944147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 18169154 - 18169201
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaa 188  Q
    |||||||||||||||||||||||| |||| |||| ||| |||||||||    
T  18169154 aaagagaaatgatatttgtacaaccactttgtgacaactttttgacaa 18169201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 22813069 - 22813144
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactc 216  Q
    |||||||||||||||||||||||| ||||  ||| ||| ||||||||| ||| | |  |||| |||||||||||||    
T  22813069 aaagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctcccatattcacattatactc 22813144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 52727521 - 52727446
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||  ||||  ||||||  ||||||||| ||| | |  |||||||||||||||||||    
T  52727521 aagagaaatgatatttgtacaatcactttatgataattttttgacaactttctctcacatactcacattatactct 52727446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 11173457 - 11173531
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||| ||||||||||||||| |||| |||| ||| ||||||||| ||| | | ||||||||| ||||| ||||    
T  11173457 agagaattgatatttgtacaaccactttgtgacaactttttgacaactttctttctcatactcatattattctct 11173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 34733359 - 34733293
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||| |||| |||| ||| ||||||||| ||| | |  |||||||||||||||    
T  34733359 aaatgatatttgtacaaccactttgtgacaactttttgacaactttctttcacatactcacattata 34733293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 35425744 - 35425674
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||| |||||||| ||||  | | ||| ||||||||| ||||| | ||||||||||||||||    
T  35425744 agagaaatgatatatgtacaaccactttattacaactttttgacaactttatctctcatactcacattata 35425674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 39540238 - 39540308
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||| ||||  | | ||| ||||||||||||| | | ||||||||||||||| ||||    
T  39540238 aaatgatatttgtacaaccactttctcacaactttttgacaattttctctctcatactcacattattctct 39540308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 43900829 - 43900759
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||| ||||  | | ||| ||||||||| ||| | | ||||||||||||||||    
T  43900829 agagaaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacattata 43900759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 44334873 - 44334803
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||| ||||  | | ||| ||||||||| ||| | | ||||||||||||||||    
T  44334873 agagaaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacattata 44334803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 45529016 - 45528946
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacatta 211  Q
    |||||||||||||||||||||||||| ||  ||| ||| ||| ||||| ||| | | ||||||||||||||    
T  45529016 aaagagaaatgatatttgtacaactattttttgacaacttttagacaaatttctttctcatactcacatta 45528946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 50559292 - 50559214
Alignment:
Q  135 aaaataaaagagaaatgatatttgtacaactacttcgtgataaccttt-tgacaattttatatttcatactcacattat 212  Q
    |||| ||||||||||||||||||||||||||| ||  ||| ||| ||| |||||||||| | | ||||||| |||||||    
T  50559292 aaaaaaaaagagaaatgatatttgtacaactattttttgacaacttttgtgacaattttctctctcatacttacattat 50559214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 20380960 - 20380891
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||| |||| |||| ||| | ||||||| ||| | | |||||||||| |||||    
T  20380960 gagaaatgatatttgtacaaccactttgtgacaacttcttgacaactttctctctcatactcactttata 20380891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 25959609 - 25959544
Alignment:
Q  148 aatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||| ||||| |||| |||||||| ||| ||||| ||| | | ||||||||||||||||    
T  25959609 aatgatatttggacaaccactttgtgataacttttagacaactttctctctcatactcacattata 25959544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 30796686 - 30796617
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||| ||||| |||| |||| ||| | ||||||| ||| | | |||||||||||||||    
T  30796686 agagaaatgatatttgcacaaccactttgtgacaacttcttgacaactttttctctcatactcacattat 30796617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 37303145 - 37303072
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| ||||  | | ||| ||||||||| ||| | | ||||||||||||||| ||||    
T  37303145 gagaaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcacattatcctct 37303072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 41309000 - 41309073
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||| |||||||||||||||| |||| |||| ||  |||| |||||||| | | ||||||||||||||| ||||    
T  41309000 gagatatgatatttgtacaaccactttgtgacaattttttaacaattttctctctcatactcacattatcctct 41309073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 43176200 - 43176269
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacatta 211  Q
    ||||||||||||||||||||||| |||| || | ||  || |||||| ||||| | ||||||||||||||    
T  43176200 aagagaaatgatatttgtacaaccactttgttacaattttatgacaactttatctctcatactcacatta 43176269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 50294183 - 50294114
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||| |||| | || ||| |||  |||||||||| | ||| ||||||||||||    
T  50294183 gagaaatgatatttgtacaaccactttgcgacaacttttaaacaattttatctctcacactcacattata 50294114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 51032696 - 51032627
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| | ||  | | ||| ||||||||||||| | | |||||||||||||||    
T  51032696 agagaaatgatatttgtacaaccattttctaacaactttttgacaattttctctctcatactcacattat 51032627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 5398914 - 5398962
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaa 188  Q
    ||||||||||||||||||||||||| |||| |||| ||  |||||||||    
T  5398914 aaaagagaaatgatatttgtacaaccactttgtgacaattttttgacaa 5398962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 21217310 - 21217374
Alignment:
Q  153 tatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||| ||||  ||||||| |||||||||  |||| | |||||||||| |||||||||    
T  21217310 tatttgtacaaccactttatgataactttttgacaaccttatctctcatactcacgttatactct 21217374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 27198234 - 27198162
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||  | ||  ||||||| |||  |||||||||| | ||||||||| ||||||    
T  27198234 aaagagaaatgatatttgtacaatcattttttgataacttttaaacaattttatctctcatactcatattata 27198162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 163
Target Start/End: Complemental strand, 38359386 - 38359358
Alignment:
Q  135 aaaataaaagagaaatgatatttgtacaa 163  Q
    |||||||||||||||||||||||||||||    
T  38359386 aaaataaaagagaaatgatatttgtacaa 38359358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 47988560 - 47988488
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||| ||||||||||||||||||||| ||  | | ||| ||||||||| ||| | | |||||||||||||||    
T  47988560 aaaagtgaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 47988488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 47997847 - 47997775
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||| ||||||||||||||||||||| ||  | | ||| ||||||||| ||| | | |||||||||||||||    
T  47997847 aaaagtgaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 47997775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 48007134 - 48007062
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||| ||||||||||||||||||||| ||  | | ||| ||||||||| ||| | | |||||||||||||||    
T  48007134 aaaagtgaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 48007062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 54800996 - 54801067
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||| |||| |||||||| ||| ||||||||||| ||||||||||||||||||    
T  54800996 aagagaaatgatatttgtacaaccactttgtgataacttttagacaattttatctttcatactcacattata 54801067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 34116612 - 34116538
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||| |||| |||| ||| ||||||||||||| | | ||||||||||||||||||||    
T  34116612 agagaaatgatatttgtacaaccactttgtgacaactttttgacaattttctctctcatactcacattatactct 34116538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 51318694 - 51318771
Alignment:
Q  135 aaaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||||  | | |||||||||||||||    
T  51318694 aaaagaaaagagaaatgatatttgtacaaccactttgtgataactttttgacaatttcttctatcatactcacattat 51318771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 51039187 - 51039114
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||| ||||| | ||||| ||||||||| ||||    
T  51039187 gagaaatgatatttgtacaactactttgtgacaactttttgacaactttatctctcataatcacattattctct 51039114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 4896573 - 4896499
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactc 216  Q
    ||||||||||||||||||||||| |||| |||| ||| ||||||||| ||| | |  ||||||||||||||||||    
T  4896573 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctcgcatactcacattatactc 4896499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 10994224 - 10994155
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| | || |||| || |||||||||| ||||| | |||||||||||||||    
T  10994224 agagaaatgatatttgtacaaccattttgtgacaatcttttgacaactttatctctcatactcacattat 10994155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 22257268 - 22257199
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||||||  | | |||||||||||||||    
T  22257268 agagaaatgatatttgaacaactactttgtgacaactttttgacaatttcctctatcatactcacattat 22257199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 46794572 - 46794499
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| ||||  ||| ||| ||||||||| ||| | | ||||||||||||||||||||    
T  46794572 gagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacattatactct 46794499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 52392296 - 52392223
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||| | |||| |||| ||| ||||||||| ||||| | ||||||||||||||| ||||    
T  52392296 gagaaatgatatttgtacatccactttgtgacaactttttgacaactttatctctcatactcacattatcctct 52392223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 1031755 - 1031823
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| |||| |||||||| | ||||||| ||| | | |||||||||||||||    
T  1031755 gagaaatgatatttgtacaaccactttgtgataacttcttgacaactttctctctcatactcacattat 1031823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 34974446 - 34974522
Alignment:
Q  136 aaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||| ||||||||||||||||||| | ||||||| |||   ||||||||||| | | |||||||||||||||    
T  34974446 aaataaaagggaaatgatatttgtacaaccatttcgtgacaactccttgacaattttttctctcatactcacattat 34974522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 35017152 - 35017224
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    |||||||||||||||||||||||| || |||| ||| |||| |||| ||||| | ||||||| ||||||||||    
T  35017152 agagaaatgatatttgtacaactattttgtgacaacttttttacaactttatctctcatactaacattatact 35017224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 10096815 - 10096744
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||| ||||  | | ||| ||||||||||||| | | ||||||||||||||||    
T  10096815 aagagaaatgatatttgtacaaccactttattacaactttttgacaattttctttctcatactcacattata 10096744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 39449171 - 39449237
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    |||||||||||||||| |||||||| || ||||||| |||||||||||||| | | ||||||||||||    
T  39449171 aagagaaatgatatttatacaactattttgtgataa-cttttgacaattttttctctcatactcacat 39449237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 36444469 - 36444395
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    |||||||||||||||||||||||| | ||  ||||||| |||| |||| ||| | | ||||||||||||||||||    
T  36444469 aaagagaaatgatatttgtacaaccattttatgataactttttaacaactttctctctcatactcacattatact 36444395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 11064160 - 11064087
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| |||| ||| |||||||||  || | | ||||||||||||||| ||||    
T  11064160 gagaaatgatatttgtacaaccactttgtgacaactttttgacaacattctctctcatactcacattatgctct 11064087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 23347775 - 23347848
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||| | |||| |||| ||| |||| |||||||| | | ||||||||||||||| ||||    
T  23347775 gagaaatgatatttgtacatccactttgtgacaactttttaacaattttctctctcatactcacattatcctct 23347848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 36123108 - 36123036
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||| ||||||| |||| || ||||  ||||||||||||| | ||| ||||||||||||||||||    
T  36123108 gagaaatgatattcgtacaaccactttgtaataat-ttttgacaattttctcttttatactcacattatactct 36123036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 51296264 - 51296187
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||  ||||  ||| ||| ||||||||| ||| | |  |||||||||||||||||||    
T  51296264 aaaagagaaatgatatttgtacaatcactttatgacaactttttgacaactttctctcacatactcacattatactct 51296187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 53583203 - 53583126
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||| ||||  | | ||| ||||||||| ||| | | ||||||||||||||| ||||    
T  53583203 aaaagagaaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcacattatcctct 53583126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 25725765 - 25725697
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| ||||  | | ||| ||||||||| ||| | |||||||||||||||||    
T  25725765 gagaaatgatatttgtacaaccactttctaacaactttttgacaactttctctttcatactcacattat 25725697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 31240648 - 31240716
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| |||| |||||||| |||| |||| ||| | | ||| |||||||||||    
T  31240648 gagaaatgatatttgtacaaccactttgtgataacttttttacaactttctctctcaaactcacattat 31240716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 33820411 - 33820339
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||||||| ||  | | ||| ||||||||| ||| | | |||||||||||||||    
T  33820411 aaaagagaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 33820339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 40629412 - 40629348
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcac 207  Q
    |||||||||||||||||||||||| || || ||||||||| ||||| ||| | | ||||||||||    
T  40629412 agagaaatgatatttgtacaactattttgtaataacctttggacaactttctctctcatactcac 40629348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 45548854 - 45548790
Alignment:
Q  145 agaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    |||||||||||||||||||| | || |||||||  ||||||||| ||| | ||||||||||||||    
T  45548854 agaaatgatatttgtacaaccattttgtgataattttttgacaactttttctttcatactcacat 45548790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 41952825 - 41952896
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||| || ||||| |||||||  ||||||||| ||| | | |||||||||| ||||    
T  41952825 aaagagaaatgatatttgtataaatactttgtgataattttttgacaactttctctatcatactcaccttat 41952896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 42853937 - 42854008
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||| ||  ||| ||| ||| ||||| ||| | | ||||||||||||||||    
T  42853937 aagagaaatgatatttgtacaactattttttgacaacttttagacaactttctctatcatactcacattata 42854008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 46566927 - 46566998
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||| | |||| |||| ||| ||| ||||| ||| | | ||||||||||||||||    
T  46566927 aagagaaatgatatttgtacatccactttgtgacaacttttagacaactttctctctcatactcacattata 46566998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 56379390 - 56379465
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| ||||| | | ||| |||| |||| ||| | | ||||||||||||||| ||||    
T  56379390 aagagaaatgatatttgtacaaccacttcctcacaacttttttacaactttctctctcatactcacattattctct 56379465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 3664832 - 3664758
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||| || ||| |||||| |||| ||| |||||||||| || | | |||||| |||||||||||||    
T  3664832 agagaaatgatatatgcacatctactttgtgacaacattttgacaatcttctctctcatacccacattatactct 3664758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 6953461 - 6953391
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| | |||| |||| ||| |||| |||| ||||| | ||||||||| |||||    
T  6953461 aagagaaatgatatttgtacatccactttgtgacaactttttaacaactttatctctcatactcatattat 6953391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 12241056 - 12241126
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||||| ||  | | ||| ||||||||| ||| | | |||||||||||||||    
T  12241056 aagagaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 12241126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 28203392 - 28203468
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttata---tttcatactcacattatactct 217  Q
    ||||||||||||||||||||  | || || ||||  ||||||||| ||||||   ||||||||||||||||||||||    
T  28203392 gagaaatgatatttgtacaatcattttgtaataattttttgacaactttatactctttcatactcacattatactct 28203468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 31804401 - 31804331
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||  |||| |||||||  |||||| |||||| | | ||||||||| ||||||    
T  31804401 agagaaatgatatttgtacaatcactttgtgataattttttgataattttctctctcatactcagattata 31804331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 9472585 - 9472516
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||||| ||  | ||||  ||||||||| ||| | | |||||||||||||||    
T  9472585 agagaaatgatatttgtacaactattttctaataattttttgacaactttctctctcatactcacattat 9472516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 18880785 - 18880854
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||| |||||||| | ||  ||||||| ||| ||||||||| | | ||||||||||||||||    
T  18880785 gagaaatgatatatgtacaacaattttatgataacttttagacaattttctctctcatactcacattata 18880854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 25523269 - 25523196
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| ||  | | ||| ||||||||| ||| | | ||||||||||||||| ||||    
T  25523269 gagaaatgatatttgtacaactattttctcacaactttttgacaactttctctctcatactcacattatcctct 25523196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 35332706 - 35332775
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||| ||||  ||||||  |||||| || ||| | | ||||||||||||||||    
T  35332706 gagaaatgatatttgtacaaccactttatgataattttttgataactttctctctcatactcacattata 35332775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 38133979 - 38134048
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||| ||||||||||||| |||| |||| ||  ||||||||| | ||| |||| ||||||||||||    
T  38133979 agagaaattatatttgtacaaccactttgtgacaattttttgacaactctatctttcgtactcacattat 38134048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 40409238 - 40409169
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||| |||||| |||| |   ||||||||| ||| | | |||||||||||||||    
T  40409238 agagaaatgatatttgtacatctactttgtgacagttttttgacaactttctctctcatactcacattat 40409169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 44165909 - 44165982
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| | || ||  ||||||||| ||| | | ||||||||||||||| ||||    
T  44165909 gagaaatgatatttgtacaaccactttgcgacaattttttgacaactttctctctcatactcacattattctct 44165982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 48722064 - 48722137
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||||| | | || |  | ||| ||||||||||||| | | |||||||||||||||    
T  48722064 taaaagagaaatgatatttgtacatccattttgcaacaactttttgacaattttctctctcatactcacattat 48722137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 53781908 - 53781840
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||||| || || | ||| |||  |||||||| | |||||||||||||||||    
T  53781908 agagaaatgatatttgtacaactattttgt-acaacttttatacaattttctctttcatactcacattat 53781840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 169573 - 169525
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaatttt 192  Q
    ||||||||||||||||||||| | || |||| ||| |||||||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaactttttgacaatttt 169525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 3968885 - 3968953
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| | ||  | | ||| |||||||||||||   |||||||||||||||||    
T  3968885 gagaaatgatatttgtacaaccattttctaacaactttttgacaattttccctttcatactcacattat 3968953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 15596396 - 15596464
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| |||| |||| ||| | ||||||| | | | | |||||||||||||||    
T  15596396 gagaaatgatatttgtacaaccactttgtgacaacttcttgacaactctctctctcatactcacattat 15596464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 22071496 - 22071564
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||| || || |||| ||| ||||||||| | | | ||||||| |||||||||    
T  22071496 gagaaatgatatttgtacaattatttagtgacaactttttgacaactatctctttcatattcacattat 22071564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 23094373 - 23094445
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||  | || |||||||| ||| ||||| ||| | ||||||| | ||||||||    
T  23094373 aaagagaaatgatatttgtacaatcattttgtgataacttttagacaactttctctttcatatttacattata 23094445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 44272884 - 44272812
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||||| ||  ||| ||| |||  |||| ||| | | ||||||||||||||||    
T  44272884 aaagagaaatgatatttgtacaactattttttgacaacttttaaacaactttctctctcatactcacattata 44272812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 49194877 - 49194956
Alignment:
Q  137 aataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||||||||| | ||  ||| || |||||||||| ||| | | | |||||||||||| |||||    
T  49194877 aataaaagagaaatgatatttgtacaacca-tttatgacaatcttttgacaactttctctcttatactcacattagactct 49194956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 51397945 - 51397873
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||| ||||  | | ||| ||||||||| ||| |||  |||| ||||||||||    
T  51397945 aaagagaaatgatatttgtacaaccactttattacaactttttgacaactttctatcccatattcacattata 51397873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 52224094 - 52224166
Alignment:
Q  145 agaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||| ||||||| ||||  ||||||  ||||||||| ||| | |  |||||||||||||||||||    
T  52224094 agaaatgatattagtacaaccactttatgataattttttgacaactttctctcacatactcacattatactct 52224166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 42047330 - 42047408
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||||||||| | || || |||||||||||||| | | ||||||||||||||||||||    
T  42047330 taaaagagaaatgatatttgtacaactactttgggacaatcttttgacaattttctctctcatactcacattatactct 42047408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 21418665 - 21418590
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||||| ||| | | ||||||||||||||||||||    
T  21418665 aagagaaatgatatttgtacaaccactttctgacaaccttttgacaactttctctctcatactcacattatactct 21418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 6004936 - 6005013
Alignment:
Q  136 aaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||||||||||||| |||| ||  ||| ||||| ||| | | ||||||||||||||||    
T  6004936 aaataaaagagaaatgatatttgtacaactactttgtgacaatttttagacaactttctctctcatactcacattata 6005013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 28927677 - 28927754
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||| |||| |||| ||| |||| |||||||| | | ||||||||||||||| ||||    
T  28927677 aaaagagaaatgatatttgtacaaccactttgtgacaactttttaacaattttttctctcatactcacattattctct 28927754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 45101392 - 45101469
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||| |||| |||| ||| ||||||||| ||| | | ||||||||||||||| ||||    
T  45101392 aaaagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacattatcctct 45101469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 7596971 - 7596889
Alignment:
Q  136 aaataaaa-gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||| ||||||||||||||||||||  |||| |||| ||| | ||||||||||||| | || |||||||||||||||||    
T  7596971 aaataaaatgagaaatgatatttgtacaatcactttgtgacaacttcttgacaattttatctctcttactcacattatactct 7596889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 7678727 - 7678801
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||||| ||||  ||| ||| || |||||||||| | | ||||||||||||||||    
T  7678727 taaaagagaaatgatatttgtacaaccactttttgacaactttgtgacaattttctctctcatactcacattata 7678801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 34473944 - 34474022
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||   |||| |||| || |||||||||||||| | | ||||||||||||||| ||||    
T  34473944 taaaagagaaatgatatttgtacattcactttgtgacaatcttttgacaattttctctctcatactcacattatcctct 34474022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 39021516 - 39021446
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||| | || |||||||| ||||||||| | | | |||||||||||||||||    
T  39021516 aagagaaatgatatttgtacaaccattttgtgataactttttgacaactctctctttcatactcacattat 39021446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 32725855 - 32725786
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    ||||||||||||||||||||||||| |||| |||||||  ||| ||||||||| | | ||||||||||||    
T  32725855 aaaagagaaatgatatttgtacaaccactttgtgataatttttagacaattttttctctcatactcacat 32725786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 44380693 - 44380616
Alignment:
Q  136 aaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||||||| | || |||| |||||||  |||| ||| | | ||||||||||||||||    
T  44380693 aaataaaagagaaatgatatttgtacaaccattttgtgacaacctttaaacaactttctctctcatactcacattata 44380616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 8074796 - 8074724
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    |||||||||||||||||||||| ||||  ||| ||  |||| |||||||||||| |||||||||| |||||||    
T  8074796 agagaaatgatatttgtacaaccactttatgacaattttttaacaattttatatctcatactcacgttatact 8074724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 21273781 - 21273713
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| | || |||| ||| | ||||||||||||| | |||||||||||||||    
T  21273781 gagaaatgatatttgtacaaccattttgtgacaacttcttgacaattttatctctcatactcacattat 21273713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 23952484 - 23952559
Alignment:
Q  134 taaaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    |||||| ||||||||||||||||||||||| || || ||||| || |||  |||||||| | ||||||||||||||    
T  23952484 taaaattaaagagaaatgatatttgtacaattattttgtgatgacttttgtacaattttctttttcatactcacat 23952559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 26294187 - 26294262
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||| ||||||| | || |||| ||| ||||||||||||| | |  |||||||||||||||||||    
T  26294187 aagagaaatgatattggtacaaccattttgtgacaactttttgacaattttctctcacatactcacattatactct 26294262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 26307444 - 26307519
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||| ||||||| | || |||| ||| ||||||||||||| | |  |||||||||||||||||||    
T  26307444 aagagaaatgatattggtacaaccattttgtgacaactttttgacaattttctctcacatactcacattatactct 26307519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 8841028 - 8841098
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||| |||| |||| ||  ||||||||||||| | | ||||||| |||||||    
T  8841028 aagagaaatgatatttgtacaaccactttgtgagaattttttgacaattttctctatcatacttacattat 8841098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 27836183 - 27836253
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||| |||| |||| ||| ||||||||| ||  | ||||||||||||| ||||||||    
T  27836183 aaatgatatttgtacaaccactttgtgacaactttttgacaacttactctttcatactcacactatactct 27836253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 29910288 - 29910214
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||| ||||| ||||  | ||||  ||||||||| ||| | ||||||||||||||||||    
T  29910288 taaaagagaaatgatatttgcacaaccactttattataattttttgacaactttctctttcatactcacattata 29910214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 40842012 - 40842058
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaa 188  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||    
T  40842012 aagagaaatgatatttgtacaaccactttgtgataactttttgacaa 40842058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 42012663 - 42012593
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||| |||||||||||  ||||||| ||||||||| ||| | | |||||||||| ||||    
T  42012663 aagagaaatgatatttatacaactactttatgataactttttgacaactttctctctcatactcacgttat 42012593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 6161947 - 6162016
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| | ||  ||| ||||||||||||| | | | |||||||||||||||||    
T  6161947 agagaaatgatatttgtacaaccattttatgacaaccttttgacaactctctctttcatactcacattat 6162016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 6849332 - 6849263
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||| |||||| | || |||| ||| ||| ||||| ||||| ||||||||||||||||||    
T  6849332 gagaaatgatatttatacaaccattttgtgacaacttttagacaactttatctttcatactcacattata 6849263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 9738769 - 9738696
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||||||| ||||  | | ||  ||||||||||||| | | |||||||||||||||    
T  9738769 taaaagagaaatgatatttgtacaaccactttctcacaattttttgacaattttctctctcatactcacattat 9738696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 12045728 - 12045655
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||| | || |||| ||| ||| ||||| ||| | | ||||||||||||||||    
T  12045728 aaaagagaaatgatatttgtacaaccatttagtgacaacttttagacaactttctctctcatactcacattata 12045655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 33863322 - 33863250
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||| |||||||| | ||  ||||||  ||| ||||||||||| | ||||||||||||||||    
T  33863322 aaagagaaatgatatatgtacaaccattttctgataatttttagacaattttatctctcatactcacattata 33863250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 37033174 - 37033099
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||| ||||| ||||  ||| ||| |||||| |||||| | | ||||||||| ||||||||||    
T  37033174 aagagaaatgatatttgcacaaccactttctgacaactttttgataattttctttctcatactcatattatactct 37033099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 42716313 - 42716388
Alignment:
Q  137 aataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||| ||||||||||||||||||||||| ||||  | ||||  ||||||||| ||| | | |||||||||||||||    
T  42716313 aatataagagaaatgatatttgtacaaccactttttcataattttttgacaactttctctctcatactcacattat 42716388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 44090882 - 44090953
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacatt 210  Q
    |||||||||||||||||||| ||||||||||   |||||| || |||||||||| | | |||||| ||||||    
T  44090882 taaaagagaaatgatatttgaacaactacttttcgataactttgtgacaattttctctctcatacacacatt 44090953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 2621781 - 2621855
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttt-tgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||| |||||||| || |||||||| ||| |||||| ||||| | | ||||| ||||||||    
T  2621781 aaaagagaaatgatatttatacaactaatttgtgataacttttgtgacaactttatctcttatacttacattata 2621855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 3988904 - 3988978
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||| ||||  | | ||  ||||||||| ||| | | ||||||||||||||||||||    
T  3988904 agagaaatgatatttgtacaaccactttctaacaaatttttgacaaatttttctctcatactcacattatactct 3988978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 22852912 - 22852842
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||| |||| |||| ||| | ||||||| ||| | | ||||||||| |||||    
T  22852912 aagagaaatgatatttgtacaaccactttgtgacaacttcttgacaactttttctctcatactcaaattat 22852842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 28623182 - 28623120
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactca 206  Q
    ||||||||||||||||||||| | |  |||||||| ||||||||| ||| | |||||||||||    
T  28623182 gagaaatgatatttgtacaaccattatgtgataactttttgacaactttctctttcatactca 28623120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 41344740 - 41344667
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||  | || |||||||| |||||||||  || | | ||||||||| ||||||||||    
T  41344740 gagaaatgatatttgtacaatcagtttgtgataactttttgacaaccttctctctcatactcatattatactct 41344667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 42543549 - 42543477
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| |||||||| |||| |||| ||| | | ||| ||||||||||| ||||    
T  42543549 gagaaatgatatttgtacaaccactt-gtgataacttttttacaactttctttctcaaactcacattatcctct 42543477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 6440079 - 6440151
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttt-tgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||| ||| | | ||| ||| |||||| ||| | | ||||||||||||||||    
T  6440079 aagagaaatgatatttgtacaactatttctttacaacttttgtgacaactttctctctcatactcacattata 6440151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 22767132 - 22767200
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| | ||  | | ||| ||||||||||||| | | |||||||||||||||    
T  22767132 gagaaatgatatttgtacaaccattttctcacaactttttgacaattttctctctcatactcacattat 22767200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 33302010 - 33301982
Alignment:
Q  137 aataaaagagaaatgatatttgtacaact 165  Q
    |||||||||||||||||||||||||||||    
T  33302010 aataaaagagaaatgatatttgtacaact 33301982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 43873762 - 43873694
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| | || |||| ||  ||||||||| | | | |||||||||||||||||    
T  43873762 gagaaatgatatttgtacaaccattttgtgacaattttttgacaactctctctttcatactcacattat 43873694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 3e-19; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 34139112 - 34139036
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||| |||||| |||||||  ||||||||||||||| | ||||||||||||||| ||||    
T  34139112 aaagagaaatgatatttgtacatctactttgtgataattttttgacaattttatctctcatactcacattatcctct 34139036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 1889133 - 1889220
Alignment:
Q  130 gacataaaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||| ||  ||||||||| ||| | | ||||||||||||||||||||    
T  1889133 gacataaaataaaagagaaatgatatttgtacaaccactttctgacaattttttgacaactttctctctcatactcacattatactct 1889220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 3091741 - 3091809
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||| | | |||||||||||||||    
T  3091741 gagaaatgatatttgtacaactattttgtgataactttttgacaattttctctctcatactcacattat 3091809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 36132970 - 36133047
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||| |||| |||| ||  || |||||| ||||| | ||||||||||||||||||||    
T  36132970 aaaagagaaatgatatttgtacaaccactttgtgacaattttgtgacaactttatctctcatactcacattatactct 36133047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 35792529 - 35792458
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||| |||| |||||||  ||| ||||| ||| ||| ||||||||||||||||    
T  35792529 aagagaaatgatatttgtacaacaactttgtgataatttttagacaactttttatctcatactcacattata 35792458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 2308394 - 2308324
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||| | ||  ||| ||||||||||||| ||||| | ||||||||||||||||    
T  2308394 agagaaatgatatttgtacaaccaatttttgacaaccttttgacaactttatctctcatactcacattata 2308324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 13711060 - 13711134
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||| ||||  ||||||| || |||||| ||| | | ||||||||||||||||||||    
T  13711060 agagaaatgatatttgtacaaccactttttgataactttgtgacaactttctctctcatactcacattatactct 13711134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 10749755 - 10749682
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||||||| | ||  ||| || |||||||||||| | | |||||||||||||||||    
T  10749755 taaaagagaaatgatatttgtacaaccattttatgacaatcttttgacaattctctctttcatactcacattat 10749682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 31296920 - 31296843
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||| | || |||| ||| ||||||||| ||||| | |||||||||| ||| |||||    
T  31296920 aaaagagaaatgatatttgtacaaccattttgtgacaacgttttgacaactttatctctcatactcacgttaaactct 31296843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 4738647 - 4738575
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||||| |||| |||| ||| ||||||||| ||  | | |||||||||||||||    
T  4738647 aaaagagaaatgatatttgtacaaccactttgtgacaactttttgacaacttcctctatcatactcacattat 4738575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 8352832 - 8352904
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||||| ||  | ||||| ||| ||||||||| | | ||||||||||||||||    
T  8352832 aaagagaaatgatatttgtacaactattttttaataacttttagacaattttctctctcatactcacattata 8352904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 26321772 - 26321700
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||| |||||||||||||||||||| | || |||||||| ||||||||||||  | | |||||||||||||||    
T  26321772 aaaaaagaaatgatatttgtacaaccattttgtgataactttttgacaatttcctctatcatactcacattat 26321700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 12600048 - 12600119
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    ||||||||||||||||||||| |||| |||||||  || |||||| ||| | | ||||||||||||||||||    
T  12600048 gagaaatgatatttgtacaaccactttgtgataattttgtgacaactttctctctcatactcacattatact 12600119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 14140410 - 14140335
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||| || |||| ||| ||||||||| | | | | |||| |||||||||||||||    
T  14140410 aagagaaatgatatttgtacaactaatttgtgacaactttttgacaactatctctctcattctcacattatactct 14140335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 30339937 - 30339874
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacatt 210  Q
    |||||||||||||||||  | ||  ||||||| ||||||||| |||||||||||||||||||||    
T  30339937 aaatgatatttgtacaatcattttttgataactttttgacaactttatatttcatactcacatt 30339874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 30856797 - 30856876
Alignment:
Q  135 aaaataaaa-gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||| ||||||||||||||||||||| |||| |||| ||| ||| ||||| ||| | | ||||||||||||||||    
T  30856797 aaaataaaatgagaaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacattata 30856876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 6365185 - 6365259
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||| |||| |||| ||  ||||||||||||| | |  |||| ||||||||||||||    
T  6365185 agagaaatgatatttgtacaaccactttgtgacaattttttgacaattttctctcacatattcacattatactct 6365259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 13553146 - 13553216
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||| |||| |||||||  ||| ||||||||| | | ||||||||| ||||||    
T  13553146 agagaaatgatatttgtacaaccactttgtgataatttttggacaattttctctctcatactcatattata 13553216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 33296144 - 33296074
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||| |||| |||| ||| ||||||||| ||  | | |||||||||||||||    
T  33296144 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaacttcctctatcatactcacattat 33296074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 26321940 - 26321871
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    |||| |||||||||||||||||||| | || |||||||| ||||||||||||  | | ||||||||||||    
T  26321940 aaaaaagaaatgatatttgtacaaccattttgtgataactttttgacaatttcctctatcatactcacat 26321871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 32688615 - 32688542
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| ||||  ||| ||  ||||||||| ||| | | ||||||||||||||||||||    
T  32688615 gagaaatgatatttgtacaaccactttctgacaattttttgacaactttctctctcatactcacattatactct 32688542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 36435681 - 36435754
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| |||| ||| |||| |||| ||| | |  |||||||||||||||||||    
T  36435681 gagaaatgatatttgtacaaccactttgtgacaactttttaacaactttctctcacatactcacattatactct 36435754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 5455524 - 5455456
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||| | |||| |||| ||||||||||||| ||| | | | |||||||||||||    
T  5455524 gagaaatgatatttgtacatccactttgtgacaaccttttgacaactttctctcttatactcacattat 5455456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 43665625 - 43665693
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    |||||||||||||||||| ||||  | | ||| ||||||||||||| | | ||||||||||||||||||    
T  43665625 aaatgatatttgtacaaccactttttaacaactttttgacaattttttctctcatactcacattatact 43665693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 15283323 - 15283252
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||| |||| |||| ||  ||| ||||| ||| | | ||||||||||||||||    
T  15283323 aagagaaatgatatttgtacaaccactttgtgacaatttttagacaactttctctctcatactcacattata 15283252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 5167815 - 5167742
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataacctttt--gacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||| |||| |||| ||  ||||  ||||||||| | | ||||||||||||||||    
T  5167815 aagagaaatgatatttgtacaaccactttgtgacaatttttttagacaattttctctctcatactcacattata 5167742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 6884909 - 6884975
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    |||||||||||||||||||||||| || |||||||| |||  |||| ||| | | ||||||||||||    
T  6884909 agagaaatgatatttgtacaactaatttgtgataacttttatacaactttctctctcatactcacat 6884975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 11229394 - 11229324
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| | |||| |||| ||| | ||||||| ||| | | |||||||||||||||    
T  11229394 aagagaaatgatatttgtacatccactttgtgacaacttcttgacaactttctctctcatactcacattat 11229324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 28165129 - 28165198
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||| ||||||||| | || |||| ||| ||| ||||||||| | | ||||||||||||||||    
T  28165129 gagaaatgatacttgtacaaccattttgtgacaacttttagacaattttctctctcatactcacattata 28165198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 41353572 - 41353495
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||  | ||  ||||||  |||| |||| ||| | | ||||||||||||||||||||    
T  41353572 aaaagagaaatgatatttgtacaatcaatttatgataattttttaacaactttctctctcatactcacattatactct 41353495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 7428433 - 7428502
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| || |||||    |||| |||||||| | | ||||||||||||||| ||||    
T  7428433 gagaaatgatatttgtacaactattttgtgat----tttttacaattttctctctcatactcacattatcctct 7428502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 7498065 - 7497993
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||| | ||  | | ||| ||||||||| ||| | | ||||||||||||||||    
T  7498065 aaagagaaatgatatttgtacaaccattttattacaactttttgacaactttctctctcatactcacattata 7497993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 11980651 - 11980719
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| | ||  | | ||| ||||||||| ||| ||| |||||||||||||||    
T  11980651 gagaaatgatatttgtacaaccattttctaacaactttttgacaactttttatctcatactcacattat 11980719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 39247534 - 39247490
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaa 188  Q
    ||||||||||||||||||||| | || |||||||| |||||||||    
T  39247534 gagaaatgatatttgtacaaccattttgtgataactttttgacaa 39247490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 41056884 - 41056820
Alignment:
Q  153 tatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||| ||||  ||||||| |||||||||| || | | |||||||||| |||||||||    
T  41056884 tatttgtacaaccactttatgataactttttgacaatcttctctctcatactcacgttatactct 41056820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 10521125 - 10521194
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| |||||||| | |||||||||||||||    
T  10521125 agagaaatgatatttgtacaattactttgtgataactttttgataattttatctctcatactcacattat 10521194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 32457323 - 32457250
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| |||| ||| ||||||||||||| | |  |||||||||||||||||||    
T  32457323 gagaaatgatatttgtacaaccactttgtgacaactttttgacaattttctctcacatactcacattatactct 32457250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 29383555 - 29383630
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| ||||  ||| ||| ||||||||| ||| | | ||||||||||||||||||||    
T  29383555 aagagaaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatactcacattatactct 29383630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 8173384 - 8173314
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||| |||| |||| |||||||| ||| ||||||||| | ||||||| ||||||||||    
T  8173384 agagaaatgatatttgtgcaaccactttgtgataacttttagacaattttctctttcatattcacattata 8173314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 30796149 - 30796078
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||||| |||| |||| ||  |||| |||| ||| | |||||||||||||||||    
T  30796149 aaagagaaatgatatttgtacaaccactttgtgacaatttttttacaactttctctttcatactcacattat 30796078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 31480907 - 31480832
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||| |||||||||||||||||| ||||  ||| ||| ||||||||| ||| | | ||||||||||||||||||||    
T  31480907 aagataaatgatatttgtacaaccactttctgacaacattttgacaactttttctctcatactcacattatactct 31480832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 32253778 - 32253853
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| ||||  ||||||  || ||| |||||| | | ||||||||||||||||||||    
T  32253778 aagagaaatgatatttgtacaaccactttttgataattttgtgataattttctctctcatactcacattatactct 32253853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 11743057 - 11742984
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||| ||||||||||||||| ||  ||||||  ||| ||||||||| | | ||||||||||||||||    
T  11743057 aaaagagaaataatatttgtacaactattttttgataatttttagacaattttttctctcatactcacattata 11742984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 23633398 - 23633325
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||| |||||| ||||  | ||||| ||||||||| ||| | | ||||||||||||||||    
T  23633398 aaaagagaaatgatatttctacaaccactttattataactttttgacaactttctctctcatactcacattata 23633325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 6435037 - 6435101
Alignment:
Q  145 agaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    |||||||||||||||||||| |||| |||| ||| ||| ||||| ||||| | ||||||||||||    
T  6435037 agaaatgatatttgtacaaccactttgtgacaacttttagacaactttatctctcatactcacat 6435101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 11785352 - 11785424
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||| | || |||| ||  ||||||||| ||| ||| ||||| ||||||||||    
T  11785352 aaagagaaatgatatttgtacaaccattttgtgacaattttttgacaactttctatctcatattcacattata 11785424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 3088971 - 3089042
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||| | || |||| ||| ||| ||||||||| | | ||| ||||||||||||    
T  3088971 aagagaaatgatatttgtacaaccatttagtgacaacttttagacaattttctctctcacactcacattata 3089042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 9954547 - 9954621
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||| | || |||| ||| ||||||||| ||| | | ||||||| ||||||| ||||    
T  9954547 agagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttctctctcatacttacattatcctct 9954621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 174
Target Start/End: Original strand, 12441534 - 12441568
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtga 174  Q
    |||||||||||||||||||||||||||||| ||||    
T  12441534 aaaagagaaatgatatttgtacaactactttgtga 12441568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 8395342 - 8395415
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| ||||  | | ||| ||||||||| ||| | | ||||||||||||||| ||||    
T  8395342 gagaaatgatatttgtacaaccactttctcacaactttttgacaactttctctctcatactcacattattctct 8395415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 32853219 - 32853142
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||| ||||||||||||  ||||  ||| ||| || |||||| ||| | | ||||||||||||||||||||    
T  32853219 aaaagagaaattatatttgtacaatcactttttgacaactttgtgacaactttctctctcatactcacattatactct 32853142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 237472 - 237404
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    |||||||||||||||||||||||| |  | ||||| || ||||||||| ||| | | ||||||||||||    
T  237472 aaagagaaatgatatttgtacaaccatcttgtgattactttttgacaactttctctctcatactcacat 237404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 15722577 - 15722505
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||  | || |||| ||| |||||||||  || | | ||||||||||||||||    
T  15722577 aaagagaaatgatatttgtacaatcattttgtgacaactttttgacaaccttctctctcatactcacattata 15722505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 125083 - 125165
Alignment:
Q  135 aaaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| |||||| || ||| | | | ||||||||||||| ||||    
T  125083 aaaataaaagagaaatgatatttgtacaactactttgtgacaactttttgataactttctttctaatactcacattattctct 125165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 10232490 - 10232567
Alignment:
Q  135 aaaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||| ||||||||||||||||||||||| | |||| |||||||||||||||||| ||| | | ||||| |||||||||    
T  10232490 aaaaaaaaagagaaatgatatttgtacatcaactttgtgataaccttttgacaactttctctctcatattcacattat 10232567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 28811426 - 28811501
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||||| |||| |||| || ||||||| |||||| | || |||||||||||||||||||    
T  28811426 aaagagaaatgatatttgtacaaccactttgtgacaa-cttttgataattttctcttacatactcacattatactct 28811501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 25364908 - 25364839
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||| |||| |||| ||| |||||||||  |||| ||||||||||||||||||    
T  25364908 agagaaatgatatttgtacaaccactt-gtgacaactttttgacaacattatctttcatactcacattata 25364839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 38500934 - 38501016
Alignment:
Q  135 aaaataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||| |||||||||||||||||||||||| | || |||| ||  ||||||||| ||| | ||||||||||| ||||||||||    
T  38500934 aaaatcaaagagaaatgatatttgtacaaccattttgtgacaattttttgacaactttctctttcatactcatattatactct 38501016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 34381012 - 34381085
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| |||| ||| ||||||||| ||| | | ||||||||||||||| ||||    
T  34381012 gagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacattattctct 34381085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 12779677 - 12779609
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| | || |||| ||| ||||||||| ||||| | |||||||||||||||    
T  12779677 gagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttatctctcatactcacattat 12779609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 40223863 - 40223783
Alignment:
Q  137 aataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||| ||||||| ||||||||||||| |||| |||| ||| ||||||||| ||| | | ||||||||||||||| ||||    
T  40223863 aataaatgagaaattatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacattatcctct 40223783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 19376205 - 19376130
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| ||||  ||| ||| |||||| || ||| | | ||||||||||||||||||||    
T  19376205 aagagaaatgatatttgtacaaccactttctgacaactttttgataactttctctctcatactcacattatactct 19376130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 36572688 - 36572759
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||| ||||| || |||| ||| ||||||||| | | | |||||||||||||||||    
T  36572688 aaagagaaatgatatttgtataactattttgtgacaactttttgacaactctctctttcatactcacattat 36572759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 23991207 - 23991137
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||| |||| |||| ||| |  |||||| ||||| | |||||||||||||||    
T  23991207 aagagaaatgatatttgtacaaccactttgtgacaacttcctgacaactttatctctcatactcacattat 23991137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 36713250 - 36713180
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||| |||| |||| ||| | ||||||| ||| | | ||||||||||||||||    
T  36713250 agagaaatgatatttgtacaaccactttgtgacaacttcttgacaactttctctctcatactcacattata 36713180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 8897381 - 8897450
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| | ||  ||| ||||||||||||| | | | |||||||||||||||||    
T  8897381 agagaaatgatatttgtacaaccattttatgacaaccttttgacaactctctctttcatactcacattat 8897450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 39595272 - 39595345
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| |||| ||| ||||||||| ||| | | |||||||||| |||| ||||    
T  39595272 gagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacgttattctct 39595345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 6538870 - 6538938
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||| || || |||||||  ||||||||| ||| | ||||||| |||||||||    
T  6538870 gagaaatgatatttgtacaattattttgtgataattttttgacaactttctctttcatattcacattat 6538938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 12718451 - 12718383
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| | || |||| ||| ||||||||| ||||| | ||||| |||||||||    
T  12718451 gagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttatctctcatattcacattat 12718383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 36624320 - 36624387
Alignment:
Q  146 gaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||   |||| |||||||| ||| ||||||||| | | ||||||||||||||||    
T  36624320 gaaatgatatttgtacattcactttgtgataacttttagacaattttctctctcatactcacattata 36624387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 582939 - 582869
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||| |||||||| || |||||||| |||  |||||||| | | ||||||||| ||||||    
T  582939 agagaaatgatatttttacaactattttgtgataacttttaaacaattttctctctcatactcatattata 582869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 1774356 - 1774286
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| |||||| |||| ||| | ||||||| ||| | | ||||||||| |||||    
T  1774356 aagagaaatgatatttgtacatctactttgtgacaacttcttgacaactttctctctcatactcatattat 1774286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 9714210 - 9714136
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    ||||||||||||||| |||||||| ||||  ||| ||| |||| |||||||| | | |||||||| |||||||||    
T  9714210 aaagagaaatgatatatgtacaaccactttatgacaactttttaacaattttctctctcatactcgcattatact 9714136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 19827442 - 19827372
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||| |||| ||| |||| |||| ||  ||||||||||||||| | |||||||||||| |||||||    
T  19827442 aaatgatatctgtataaccactttgtgacaattttttgacaattttatctctcatactcacatgatactct 19827372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 27340868 - 27340938
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||  ||||  | ||||  ||||||||||||| | | ||||||||||||||||    
T  27340868 agagaaatgatatttgtacaatcactttattataattttttgacaattttctctctcatactcacattata 27340938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 8787228 - 8787159
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| | || |||||||  ||||||||| ||| | | ||||| |||||||||    
T  8787228 agagaaatgatatttgtacaacaatttagtgataattttttgacaagtttttctctcatattcacattat 8787159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 9277682 - 9277613
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||||||||  | ||||  ||||||| | ||| | |||||||||||| |||||    
T  9277682 gagaaatgatatttgtacaactactttattataattttttgacgactttctctttcatactcacgttata 9277613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 14073048 - 14073124
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| | | || |||| |||||||||| |||||| | | ||||||| ||||||| ||||    
T  14073048 aaaagagaaatgatatttgtacatcca-tttgtgacaaccttttgataattttctctctcatacttacattatcctct 14073124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 15639385 - 15639454
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||| | || |||| ||| ||| ||||| ||| | | ||||||||||||||||    
T  15639385 gagaaatgatatttgtacaaccatttggtgacaacttttagacaactttttctctcatactcacattata 15639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 32872971 - 32872902
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttt-tgacaattttatatttcatactcacatt 210  Q
    ||||||||||||||||| ||||||| ||  ||| ||| ||| |||||||||| | |||||||||||||||    
T  32872971 aagagaaatgatatttgaacaactattttttgacaacttttgtgacaattttctttttcatactcacatt 32872902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 35165676 - 35165717
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttt 182  Q
    |||||||||||||||||||||||||| ||  |||||||||||    
T  35165676 aaagagaaatgatatttgtacaactattttttgataaccttt 35165717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 12662018 - 12661950
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||| | |||| |||| ||  ||||||||| ||| | | |||||||||||||||    
T  12662018 gagaaatgatatttgtacatccactttgtgacaattttttgacaactttctctctcatactcacattat 12661950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 17097874 - 17097806
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttt-tgacaattttatatttcatactcacatt 210  Q
    |||||||||||||||| ||||| | ||  ||||||| ||| |||||||||| ||| |||||||||||||    
T  17097874 agagaaatgatatttgaacaaccattttttgataacttttgtgacaattttctatctcatactcacatt 17097806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 18638899 - 18638827
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||| ||||| | ||  | | ||| ||||||||| ||||| | ||||||||||||||||    
T  18638899 aaagagaaatgatatttgcacaaccattttattacaactttttgacaaatttatctctcatactcacattata 18638827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 19127124 - 19127192
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||| |||| |||| ||| | ||||||| | | | | |||||||||||||||    
T  19127124 gagaaatgatatttgtacaaccactttgtgacaacttcttgacaactctctctctcatactcacattat 19127192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 29402181 - 29402253
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    |||||||||||||||||||||  |||| || ||||  ||||||||| ||| | ||||||| | ||||||||||    
T  29402181 agagaaatgatatttgtacaatcactttgtaataattttttgacaactttctttttcatagtaacattatact 29402253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 35098806 - 35098734
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||| | ||  ||||||| |||  |||||||| | | ||||||||| ||||||    
T  35098806 aaagagaaatgatatttgtacaaccattttttgataacatttaaacaattttttctctcatactcatattata 35098734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 42909715 - 42909787
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||| ||||||||||||| ||||  | | ||| ||||||||| ||| | | |||||||||||||||    
T  42909715 aaaagagaaattatatttgtacaaccactttctcacaactttttgacaactttctttctcatactcacattat 42909787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 366653 - 366730
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||| |||||| ||||  ||||||| ||||||||| ||| | | ||||||||||||||||||||    
T  366653 aaaagagaaatgatatttatacaaccactttctgataactttttgacaactttctctctcatactcacattatactct 366730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 37843505 - 37843430
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||||||  ||| ||| || |||||| ||| | | ||||||||||||||||||||    
T  37843505 aagagaaatgatatttgtacaactactttttgacaactttgtgacaactttctctctcatactcacattatactct 37843430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 43755751 - 43755676
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| | ||  ||||||  ||||||||||||| | ||||||||||| ||||||||||    
T  43755751 aagagaaatgatatttgtacaaccattttatgataattttttgacaattttctctttcatactcatattatactct 43755676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 50226952 - 50226877
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| |||| |||| ||| ||||||||| ||| | | |||||||| |||||||||||    
T  50226952 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcgcattatactct 50226877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 49425737 - 49425805
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| |||| |||| || |||||||||| ||||| | |||||||||||||||    
T  49425737 agagaaatgatatttgtacaaccactttgtgacaa-cttttgacaactttatctctcatactcacattat 49425805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 8905727 - 8905799
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    |||||||||||||||||||||||| ||  | | ||||||||||||| ||| ||| ||||||| ||||||||||    
T  8905727 agagaaatgatatttgtacaactattttttaacaaccttttgacaactttctatctcatacttacattatact 8905799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 15061845 - 15061913
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||| ||| |||| |||| ||| ||||||||||||| | | |||||||||||||||    
T  15061845 gagaaatgatatttgtataaccactttgtgacaactttttgacaattttctctctcatactcacattat 15061913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 27352627 - 27352699
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||| | || |||||||| ||| ||||| ||| | | ||||||||||||||||    
T  27352627 aaagagaaatgatatttgtacaaccattttgtgataacttttggacaactttctctctcatactcacattata 27352699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 25302716 - 25302641
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||| |||| |||| |||||||| | || ||| |   ||||||||||||||||||||    
T  25302716 aagagaaatgatatttgtacaaccactttgtgacaaccttttaataactttctcactcatactcacattatactct 25302641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 45042259 - 45042334
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||| ||  | | ||  ||||||||||||| | | ||||||||||||||||||||    
T  45042259 aagagaaatgatatttgtacaactattttctaacaattttttgacaattttttctctcatactcacattatactct 45042334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 31436819 - 31436893
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||| ||||  | | ||| ||||||||||||| | | ||||||||||||||| ||||    
T  31436819 agagaaatgatatttgtacaaccactttctcacaactttttgacaattttctctctcatactcacattatcctct 31436893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 8464584 - 8464515
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||| ||||  | | ||| ||||||||||||| | | ||||||||||||||||    
T  8464584 gagaaatgatatttgtacaaccactttattacaactttttgacaattttctctctcatactcacattata 8464515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 12717630 - 12717703
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| ||| | ||  | | ||| ||||||||||||| | |||||||||||||||||    
T  12717630 taaaagagaaatgatatttgtagaaccattttctaacaactttttgacaattttctctttcatactcacattat 12717703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 18610769 - 18610838
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacat 209  Q
    ||||||||||||||||||||||||||| || |||| ||| |||| |||| ||| | | ||||||||||||    
T  18610769 aaaagagaaatgatatttgtacaactattttgtgacaacttttttacaactttctctctcatactcacat 18610838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 28253015 - 28253088
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| ||||  | | ||| ||||||||||||| | | ||||||||||||||| ||||    
T  28253015 gagaaatgatatttgtacaaccactttctcacaactttttgacaattttctctctcatactcacattatcctct 28253088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 32821635 - 32821704
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||| |||| |||| ||| |||  |||||||| | | ||||||||||||||||    
T  32821635 gagaaatgatatttgtacaaccactttgtgacaacttttaaacaattttctctctcatactcacattata 32821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 2362356 - 2362428
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactc 216  Q
    ||||||||||||||||||||  ||||  ||||||| || |||||| ||||| | ||||||||| |||||||||    
T  2362356 gagaaatgatatttgtacaatcactttttgataactttgtgacaactttatctctcatactcatattatactc 2362428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 10384208 - 10384248
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataacctt 181  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  10384208 aaagagaaatgatatttgtacaactactttgtgacaacctt 10384248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 15182658 - 15182586
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||| |||||||||||||||||||||| ||  | | ||| |||||||||| || | |||||||||||||||||    
T  15182658 aaaaaagaaatgatatttgtacaactattttctaacaactttttgacaatattttctttcatactcacattat 15182586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 9882729 - 9882662
Alignment:
Q  145 agaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| || |||| ||| ||||||||| ||||| | ||||| ||| |||||    
T  9882729 agaaatgatatttgtacaactattttgtgacaacattttgacaactttatctctcatattcatattat 9882662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 38019581 - 38019506
Alignment:
Q  138 ataaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||| ||||||||||||||||| || || || |||||||| ||| ||||| ||| |  |||||||||||||||||    
T  38019581 ataaatgagaaatgatatttgtataattattttgtgataacttttagacaactttctccttcatactcacattata 38019506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 52369184 - 52369113
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||| |||||||||||||||||||||||  | ||||| ||||||||| ||| | | | ||||||||||||||    
T  52369184 aagataaatgatatttgtacaactactttattataactttttgacaactttttctctaatactcacattata 52369113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 24158648 - 24158718
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||||||| | ||||  | ||| |||  |||| ||||| |||||||||||||||||    
T  24158648 aagagaaatgatatttgtacaaccatttcggtacaacttttatacaactttatctttcatactcacattat 24158718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 12708085 - 12708158
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| ||| | ||  | | ||| ||||||||||||| | ||||||| |||||||||    
T  12708085 taaaagagaaatgatatttgtagaaccattttctaacaactttttgacaattttctctttcataatcacattat 12708158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 14247667 - 14247728
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcaca 208  Q
    |||||||||||||||||| |||| |||||||  ||||||||| ||| | | |||||||||||    
T  14247667 aaatgatatttgtacaacgactttgtgataattttttgacaactttctctctcatactcaca 14247728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 30439249 - 30439318
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| | ||  ||| ||  ||||||||| ||||| | |||||||||||||||    
T  30439249 agagaaatgatatttgtacaaccaatttatgacaattttttgacaactttatctctcatactcacattat 30439318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 30687052 - 30687121
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||| | || |||| ||| ||| ||||| ||| | | ||||||||||||||||    
T  30687052 gagaaatgatatttgtacaaccatttagtgacaacttttagacaactttttctatcatactcacattata 30687121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 31428029 - 31427960
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||||| |||| |||| ||  | ||||||| ||| | | |||||||||||||||    
T  31428029 agagaaatgatatttgtacaaccactttgtgacaatttcttgacaactttctctatcatactcacattat 31427960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 45350166 - 45350097
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||| || || |||||||  ||| || |||||| | | ||||||||||||||||    
T  45350166 gagaaatgatatttgtacaattattttgtgataatttttagataattttttctctcatactcacattata 45350097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 50528128 - 50528059
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    ||||||||||||||||||||  | || |||| ||| ||| ||||||||| | | ||||||||||||||||    
T  50528128 gagaaatgatatttgtacaatcaatttgtgacaacttttagacaattttttctctcatactcacattata 50528059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 9445108 - 9445176
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||| ||||||| | || || | ||| ||||||||| ||| | |||||||||||||||||    
T  9445108 gagaaatgatattcgtacaaccattttgtaacaactttttgacaactttctctttcatactcacattat 9445176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 25061748 - 25061780
Alignment:
Q  137 aataaaagagaaatgatatttgtacaactactt 169  Q
    |||||||||||||||||||||||||||| ||||    
T  25061748 aataaaagagaaatgatatttgtacaaccactt 25061780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 26585246 - 26585210
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataac 178  Q
    ||||||||||||||||||||||||| || ||||||||    
T  26585246 aagagaaatgatatttgtacaactattttgtgataac 26585210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 35999 - 36075
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||| ||| | | | ||||||||||||| ||||    
T  35999 aaagagaaatgatatttgtacaactactttgtgataattttttgacaactttctctcttatactcacattattctct 36075  T

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Target: scaffold0154 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 4314 - 4384
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||| | ||  ||||||| ||||||||| ||| ||| ||||||||||||||||    
T  4314 agagaaatgatatttgtacaaccattttatgataactttttgacaactttctatctcatactcacattata 4384  T

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Target: scaffold0508 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 11607 - 11539
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    ||||||||||||||||||| |||||| |||| ||| | ||||||||||| | | |||||||||||||||    
T  11607 gagaaatgatatttgtacatctactttgtgacaacttcttgacaattttctctctcatactcacattat 11539  T

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Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 219738 - 219662
Alignment:
Q  141 aaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||||||| |||| |||| ||| ||||||||| ||| | | | ||| ||||||||||||||    
T  219738 aaagagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctttcttatattcacattatactct 219662  T

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Target: scaffold0131 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 15604 - 15537
Alignment:
Q  145 agaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||||||||| |||| |||| ||| ||||||||||||| | | ||| |||||||||||    
T  15604 agaaatgatatttgtacaaccactttgtgacaactttttgacaattttctctctcaaactcacattat 15537  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 113625 - 113698
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||||| |||| |||| ||| |||| |||| ||| | |  |||||||||||||||||||    
T  113625 gagaaatgatatttgtacaaccactttgtgacaactttttaacaactttctctcacatactcacattatactct 113698  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 395861 - 395929
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattat 212  Q
    |||||||||||||| |||||||  || |||||||  |||||||||||| || ||||||||| |||||||    
T  395861 gagaaatgatatttctacaactcttttgtgataattttttgacaatttcatctttcatacttacattat 395929  T

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Target: scaffold0618 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 9028 - 8957
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacatt 210  Q
    |||||||||||||||||||| ||||||||||   |||||| || |||||||||| | | |||||| ||||||    
T  9028 taaaagagaaatgatatttgaacaactacttttcgataactttgtgacaattttctctctcatacacacatt 8957  T

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Target: scaffold0330 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 4035 - 4090
Alignment:
Q  138 ataaaagagaaatgatatttgtacaactacttcgtgat-aaccttttgacaatttt 192  Q
    ||||||||||||||||||||||||||| | || ||||| ||| |||||||||||||    
T  4035 ataaaagagaaatgatatttgtacaaccattttgtgataaactttttgacaatttt 4090  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 34411 - 34481
Alignment:
Q  147 aaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    |||||||||||||||||||| ||  ||| ||| || |||||| ||| | | ||||||||||||||||||||    
T  34411 aaatgatatttgtacaactattttttgacaactttgtgacaactttctctctcatactcacattatactct 34481  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 199261 - 199335
Alignment:
Q  139 taaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattata 213  Q
    |||||||||||||||||||||||||| ||||  | | ||  ||||||||| ||| | | ||||||||||||||||    
T  199261 taaaagagaaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatactcacattata 199335  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 440718 - 440784
Alignment:
Q  144 gagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacatt 210  Q
    ||||||||||||||||||||||||||  ||| ||| ||| ||||| ||| | | |||||||||||||    
T  440718 gagaaatgatatttgtacaactactttatgacaacttttagacaactttctctctcatactcacatt 440784  T

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Target: scaffold0087 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 27136 - 27063
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatact 215  Q
    ||||||||||||||||||||||| | ||| | | || |||||||||| ||| | | ||||||||| ||||||||    
T  27136 aagagaaatgatatttgtacaaccatttcttaacaatcttttgacaactttctctctcatactcatattatact 27063  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 38875 - 38952
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||| ||||||||||||| |||| |||| ||  |||||| |||||| | |   ||||||||||||||||||    
T  38875 aaaagagaaataatatttgtacaaccactttgtgacaattttttgaaaattttctctcatatactcacattatactct 38952  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 18000 - 18077
Alignment:
Q  140 aaaagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||||||| |||| || ||  ||| ||| || |||||||||| | | ||||||| ||||||||||||    
T  18000 aaaagagaaatgatatttggacaattattttttgacaactttgtgacaattttctctctcatacttacattatactct 18077  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 11208 - 11281
Alignment:
Q  142 aagagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacattatactct 217  Q
    ||||||||||||||| ||||||| | || |||| ||  ||||||||||||| | |  |||||||||||||||||||    
T  11208 aagagaaatgatattggtacaaccattttgtgacaa--ttttgacaattttctctcacatactcacattatactct 11281  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 17435 - 17503
Alignment:
Q  143 agagaaatgatatttgtacaactacttcgtgataaccttttgacaattttatatttcatactcacatta 211  Q
    |||||||||||||||||||||| | || || | ||  ||| ||||| ||||| ||||||||||||||||    
T  17435 agagaaatgatatttgtacaaccattttgtcacaatttttagacaactttatgtttcatactcacatta 17503  T

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