View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4648_low_19 (Length: 237)

Name: NF4648_low_19
Description: NF4648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4648_low_19
NF4648_low_19
[»] chr6 (18 HSPs)
chr6 (10-227)||(18962624-18962841)
chr6 (95-227)||(20135520-20135654)
chr6 (95-227)||(22197215-22197349)
chr6 (95-223)||(18182968-18183098)
chr6 (84-228)||(19486882-19487028)
chr6 (154-227)||(23085433-23085506)
chr6 (84-139)||(5295514-5295569)
chr6 (84-223)||(8761344-8761485)
chr6 (98-148)||(23081050-23081100)
chr6 (101-227)||(21567598-21567726)
chr6 (84-194)||(30678614-30678725)
chr6 (93-226)||(25770391-25770526)
chr6 (95-223)||(18405545-18405675)
chr6 (101-227)||(19455569-19455697)
chr6 (101-227)||(21474146-21474274)
chr6 (106-227)||(15461882-15462005)
chr6 (95-140)||(22436504-22436549)
chr6 (101-227)||(24516021-24516149)
[»] scaffold0529 (1 HSPs)
scaffold0529 (84-223)||(4803-4944)
[»] chr7 (23 HSPs)
chr7 (84-227)||(15627195-15627340)
chr7 (95-227)||(14042366-14042500)
chr7 (95-227)||(14352396-14352530)
chr7 (93-227)||(12798942-12799078)
chr7 (101-227)||(15100052-15100180)
chr7 (101-223)||(16069746-16069870)
chr7 (101-221)||(14140357-14140479)
chr7 (101-227)||(13676123-13676251)
chr7 (93-227)||(14261686-14261822)
chr7 (93-227)||(19149683-19149819)
chr7 (93-227)||(20749082-20749218)
chr7 (168-227)||(48812792-48812851)
chr7 (101-223)||(15343107-15343231)
chr7 (95-223)||(14957229-14957359)
chr7 (116-227)||(14283838-14283951)
chr7 (126-227)||(11385903-11386006)
chr7 (98-223)||(12690177-12690304)
chr7 (95-223)||(11550567-11550697)
chr7 (101-221)||(18051402-18051524)
chr7 (101-148)||(19615428-19615475)
chr7 (93-227)||(12204241-12204377)
chr7 (95-148)||(16726848-16726901)
chr7 (95-148)||(17703920-17703973)
[»] scaffold0220 (1 HSPs)
scaffold0220 (84-227)||(16484-16630)
[»] scaffold0022 (2 HSPs)
scaffold0022 (95-227)||(41343-41477)
scaffold0022 (95-227)||(75063-75197)
[»] scaffold0042 (1 HSPs)
scaffold0042 (84-227)||(26063-26208)
[»] scaffold0037 (1 HSPs)
scaffold0037 (84-227)||(114486-114631)
[»] chr8 (24 HSPs)
chr8 (93-227)||(23887776-23887912)
chr8 (95-227)||(22989793-22989927)
chr8 (95-227)||(22421791-22421925)
chr8 (95-227)||(22523294-22523428)
chr8 (95-227)||(22246332-22246466)
chr8 (95-227)||(21391760-21391894)
chr8 (95-227)||(21781086-21781220)
chr8 (95-227)||(21920003-21920137)
chr8 (95-227)||(22375352-22375486)
chr8 (93-227)||(22373617-22373753)
chr8 (95-227)||(21253693-21253827)
chr8 (95-227)||(21786254-21786388)
chr8 (93-220)||(19984935-19985064)
chr8 (84-223)||(20390838-20390979)
chr8 (93-227)||(21928176-21928312)
chr8 (95-185)||(15536173-15536265)
chr8 (84-227)||(21323167-21323312)
chr8 (101-224)||(29301331-29301456)
chr8 (95-185)||(22042617-22042709)
chr8 (95-185)||(30311043-30311135)
chr8 (84-221)||(31568732-31568870)
chr8 (101-175)||(22028185-22028261)
chr8 (95-148)||(22129516-22129569)
chr8 (95-148)||(32602974-32603027)
[»] chr3 (27 HSPs)
chr3 (93-226)||(11888046-11888182)
chr3 (95-227)||(15261931-15262065)
chr3 (95-227)||(18437441-18437575)
chr3 (95-226)||(12843798-12843931)
chr3 (93-227)||(14291214-14291350)
chr3 (95-227)||(17492152-17492286)
chr3 (101-227)||(13318192-13318320)
chr3 (95-148)||(14579103-14579156)
chr3 (101-227)||(16825971-16826099)
chr3 (101-223)||(16832218-16832342)
chr3 (101-223)||(11949598-11949722)
chr3 (93-227)||(15229914-15230050)
chr3 (93-227)||(15235782-15235918)
chr3 (101-227)||(17493957-17494085)
chr3 (106-227)||(14575297-14575420)
chr3 (101-221)||(16378624-16378746)
chr3 (95-223)||(24185495-24185625)
chr3 (94-233)||(15013450-15013591)
chr3 (101-227)||(12272649-12272777)
chr3 (93-227)||(12858177-12858313)
chr3 (101-221)||(8745080-8745202)
chr3 (101-148)||(14089065-14089112)
chr3 (95-227)||(16694465-16694599)
chr3 (101-148)||(44779639-44779686)
chr3 (101-227)||(17188685-17188813)
chr3 (101-227)||(31941214-31941342)
chr3 (106-227)||(10417740-10417863)
[»] chr5 (18 HSPs)
chr5 (95-227)||(21336932-21337066)
chr5 (95-225)||(23473811-23473943)
chr5 (84-223)||(21983804-21983945)
chr5 (93-227)||(22233556-22233692)
chr5 (95-227)||(25429035-25429169)
chr5 (95-227)||(26736365-26736499)
chr5 (84-178)||(21561652-21561748)
chr5 (84-139)||(24618640-24618695)
chr5 (84-139)||(24714871-24714926)
chr5 (84-139)||(24747899-24747954)
chr5 (84-221)||(24796024-24796163)
chr5 (83-167)||(448-534)
chr5 (95-185)||(18781770-18781862)
chr5 (106-227)||(20824049-20824172)
chr5 (95-135)||(21882482-21882522)
chr5 (101-148)||(21676478-21676525)
chr5 (101-228)||(23563812-23563941)
chr5 (106-227)||(28892591-28892714)
[»] scaffold0016 (1 HSPs)
scaffold0016 (84-227)||(175793-175938)
[»] scaffold0333 (1 HSPs)
scaffold0333 (95-227)||(18361-18495)
[»] scaffold0040 (2 HSPs)
scaffold0040 (95-227)||(111366-111500)
scaffold0040 (98-227)||(17589-17720)
[»] scaffold0621 (1 HSPs)
scaffold0621 (95-227)||(4145-4279)
[»] scaffold0278 (1 HSPs)
scaffold0278 (95-227)||(1163-1297)
[»] scaffold0138 (2 HSPs)
scaffold0138 (95-223)||(6546-6676)
scaffold0138 (101-227)||(66-194)
[»] scaffold0080 (3 HSPs)
scaffold0080 (95-227)||(54348-54482)
scaffold0080 (95-148)||(10697-10750)
scaffold0080 (95-148)||(13352-13405)
[»] scaffold0074 (3 HSPs)
scaffold0074 (10-89)||(41598-41677)
scaffold0074 (101-227)||(5824-5952)
scaffold0074 (101-175)||(14886-14962)
[»] scaffold0004 (2 HSPs)
scaffold0004 (84-223)||(200916-201057)
scaffold0004 (101-227)||(325418-325546)
[»] chr4 (14 HSPs)
chr4 (93-227)||(15073041-15073177)
chr4 (95-227)||(14696783-14696917)
chr4 (84-227)||(22632382-22632527)
chr4 (95-227)||(14848561-14848695)
chr4 (95-227)||(16218912-16219046)
chr4 (95-227)||(16222232-16222366)
chr4 (93-223)||(8708593-8708725)
chr4 (95-227)||(16231-16365)
chr4 (95-227)||(14162152-14162286)
chr4 (95-227)||(16352726-16352860)
chr4 (95-223)||(14683253-14683383)
chr4 (101-208)||(14993829-14993938)
chr4 (95-178)||(16251046-16251131)
chr4 (101-227)||(15258609-15258737)
[»] scaffold0023 (3 HSPs)
scaffold0023 (95-227)||(1964-2098)
scaffold0023 (98-227)||(47426-47557)
scaffold0023 (95-227)||(151792-151926)
[»] scaffold0011 (2 HSPs)
scaffold0011 (95-227)||(23992-24126)
scaffold0011 (101-227)||(151278-151406)
[»] scaffold0010 (3 HSPs)
scaffold0010 (95-227)||(4626-4760)
scaffold0010 (95-148)||(14216-14269)
scaffold0010 (101-223)||(44892-45016)
[»] scaffold0001 (3 HSPs)
scaffold0001 (95-227)||(495731-495865)
scaffold0001 (84-227)||(452661-452806)
scaffold0001 (148-224)||(441404-441480)
[»] chr1 (15 HSPs)
chr1 (95-227)||(16378791-16378925)
chr1 (95-227)||(21861901-21862035)
chr1 (95-227)||(21751634-21751768)
chr1 (93-227)||(22359770-22359906)
chr1 (93-227)||(21739562-21739698)
chr1 (93-227)||(21743078-21743214)
chr1 (102-227)||(20140780-20140907)
chr1 (84-139)||(23196484-23196539)
chr1 (84-227)||(41311254-41311400)
chr1 (95-148)||(429685-429738)
chr1 (95-148)||(17042543-17042596)
chr1 (101-167)||(19857062-19857130)
chr1 (101-227)||(20833434-20833562)
chr1 (95-148)||(21233259-21233312)
chr1 (101-227)||(22016279-22016407)
[»] scaffold0243 (2 HSPs)
scaffold0243 (95-227)||(24404-24538)
scaffold0243 (101-222)||(10237-10360)
[»] scaffold0018 (2 HSPs)
scaffold0018 (84-226)||(23746-23890)
scaffold0018 (94-227)||(9809-9944)
[»] scaffold0342 (1 HSPs)
scaffold0342 (95-227)||(14725-14859)
[»] scaffold0282 (1 HSPs)
scaffold0282 (95-227)||(13938-14072)
[»] scaffold0020 (2 HSPs)
scaffold0020 (100-227)||(175699-175828)
scaffold0020 (101-227)||(99048-99176)
[»] scaffold0270 (2 HSPs)
scaffold0270 (95-233)||(6578-6718)
scaffold0270 (95-233)||(13708-13848)
[»] scaffold0234 (1 HSPs)
scaffold0234 (93-223)||(23045-23177)
[»] scaffold0100 (1 HSPs)
scaffold0100 (93-227)||(21644-21780)
[»] chr2 (11 HSPs)
chr2 (94-227)||(24817835-24817970)
chr2 (95-227)||(23105724-23105858)
chr2 (95-227)||(22733770-22733904)
chr2 (93-227)||(23098012-23098148)
chr2 (95-227)||(23074176-23074310)
chr2 (93-184)||(23113079-23113172)
chr2 (84-221)||(27790059-27790198)
chr2 (101-221)||(12576672-12576794)
chr2 (95-141)||(11351707-11351753)
chr2 (95-182)||(23204672-23204761)
chr2 (84-144)||(1066149-1066209)
[»] scaffold0993 (2 HSPs)
scaffold0993 (99-227)||(593-723)
scaffold0993 (95-145)||(777-827)
[»] scaffold0331 (1 HSPs)
scaffold0331 (84-204)||(15427-15549)
[»] scaffold0324 (1 HSPs)
scaffold0324 (95-227)||(12673-12806)
[»] scaffold0218 (1 HSPs)
scaffold0218 (95-227)||(25171-25305)
[»] scaffold1615 (1 HSPs)
scaffold1615 (99-227)||(1196-1326)
[»] scaffold0585 (1 HSPs)
scaffold0585 (93-227)||(4546-4682)
[»] scaffold0192 (1 HSPs)
scaffold0192 (93-227)||(29238-29374)
[»] scaffold0165 (1 HSPs)
scaffold0165 (93-227)||(11671-11807)
[»] scaffold0046 (2 HSPs)
scaffold0046 (93-227)||(60450-60586)
scaffold0046 (84-148)||(79279-79343)
[»] scaffold0012 (1 HSPs)
scaffold0012 (95-225)||(216879-217011)
[»] scaffold0647 (1 HSPs)
scaffold0647 (95-227)||(7118-7252)
[»] scaffold0575 (1 HSPs)
scaffold0575 (95-227)||(4294-4428)
[»] scaffold0413 (1 HSPs)
scaffold0413 (95-227)||(3312-3446)
[»] scaffold0006 (1 HSPs)
scaffold0006 (95-227)||(103938-104072)
[»] scaffold0509 (1 HSPs)
scaffold0509 (84-228)||(11540-11686)
[»] scaffold0358 (2 HSPs)
scaffold0358 (95-227)||(8661-8795)
scaffold0358 (95-227)||(17857-17991)
[»] scaffold0122 (1 HSPs)
scaffold0122 (95-227)||(40964-41098)
[»] scaffold0084 (1 HSPs)
scaffold0084 (95-227)||(7934-8068)
[»] scaffold0075 (1 HSPs)
scaffold0075 (95-227)||(55929-56063)
[»] scaffold0379 (1 HSPs)
scaffold0379 (84-227)||(5337-5482)
[»] scaffold0124 (1 HSPs)
scaffold0124 (84-227)||(14919-15064)
[»] scaffold0083 (2 HSPs)
scaffold0083 (84-227)||(7037-7182)
scaffold0083 (84-227)||(8494-8639)
[»] scaffold0523 (1 HSPs)
scaffold0523 (101-227)||(2582-2710)
[»] scaffold0239 (1 HSPs)
scaffold0239 (101-227)||(10251-10379)
[»] scaffold0114 (1 HSPs)
scaffold0114 (97-227)||(17804-17936)
[»] scaffold0026 (1 HSPs)
scaffold0026 (93-227)||(51523-51659)
[»] scaffold0077 (1 HSPs)
scaffold0077 (101-226)||(19099-19226)
[»] scaffold0335 (1 HSPs)
scaffold0335 (93-224)||(4707-4840)
[»] scaffold0130 (1 HSPs)
scaffold0130 (93-227)||(4346-4482)
[»] scaffold0108 (1 HSPs)
scaffold0108 (93-227)||(49816-49952)
[»] scaffold0067 (4 HSPs)
scaffold0067 (101-227)||(29335-29463)
scaffold0067 (101-227)||(49645-49773)
scaffold0067 (101-227)||(58679-58807)
scaffold0067 (101-227)||(65067-65195)
[»] scaffold0005 (1 HSPs)
scaffold0005 (101-223)||(262941-263065)
[»] scaffold0228 (1 HSPs)
scaffold0228 (84-148)||(21033-21097)
[»] scaffold0476 (1 HSPs)
scaffold0476 (95-215)||(10509-10631)
[»] scaffold0120 (2 HSPs)
scaffold0120 (99-227)||(8733-8863)
scaffold0120 (95-148)||(13876-13929)
[»] scaffold0865 (1 HSPs)
scaffold0865 (93-228)||(1729-1866)
[»] scaffold0133 (1 HSPs)
scaffold0133 (93-228)||(28742-28879)
[»] scaffold1423 (1 HSPs)
scaffold1423 (97-227)||(839-971)
[»] scaffold1288 (1 HSPs)
scaffold1288 (101-227)||(320-448)
[»] scaffold0908 (1 HSPs)
scaffold0908 (95-148)||(236-289)
[»] scaffold0751 (1 HSPs)
scaffold0751 (93-227)||(4892-5028)
[»] scaffold0104 (2 HSPs)
scaffold0104 (84-153)||(25003-25072)
scaffold0104 (93-227)||(43876-44012)
[»] scaffold0079 (3 HSPs)
scaffold0079 (101-227)||(3429-3557)
scaffold0079 (95-227)||(28789-28923)
scaffold0079 (95-141)||(36297-36343)
[»] scaffold0054 (1 HSPs)
scaffold0054 (101-227)||(63984-64112)
[»] scaffold0028 (1 HSPs)
scaffold0028 (101-178)||(47979-48058)
[»] scaffold0259 (1 HSPs)
scaffold0259 (95-223)||(7973-8103)
[»] scaffold0177 (1 HSPs)
scaffold0177 (95-227)||(11815-11949)
[»] scaffold0405 (1 HSPs)
scaffold0405 (93-227)||(5312-5449)
[»] scaffold0664 (1 HSPs)
scaffold0664 (101-223)||(6753-6877)
[»] scaffold0146 (1 HSPs)
scaffold0146 (101-227)||(5539-5667)
[»] scaffold0076 (2 HSPs)
scaffold0076 (101-175)||(53888-53964)
scaffold0076 (101-148)||(31142-31189)
[»] scaffold0034 (1 HSPs)
scaffold0034 (101-227)||(2418-2546)
[»] scaffold0031 (1 HSPs)
scaffold0031 (101-227)||(110321-110449)
[»] scaffold0109 (1 HSPs)
scaffold0109 (95-227)||(13583-13717)
[»] scaffold1477 (1 HSPs)
scaffold1477 (101-188)||(969-1058)
[»] scaffold0215 (1 HSPs)
scaffold0215 (95-141)||(27954-28000)
[»] scaffold1530 (1 HSPs)
scaffold1530 (101-227)||(294-422)
[»] scaffold0501 (1 HSPs)
scaffold0501 (95-227)||(12374-12508)
[»] scaffold0393 (1 HSPs)
scaffold0393 (95-140)||(15453-15498)
[»] scaffold0348 (1 HSPs)
scaffold0348 (101-175)||(5314-5390)
[»] scaffold0312 (1 HSPs)
scaffold0312 (95-148)||(812-865)
[»] scaffold0106 (1 HSPs)
scaffold0106 (101-227)||(34048-34176)
[»] scaffold0102 (1 HSPs)
scaffold0102 (101-227)||(42409-42537)
[»] scaffold0072 (1 HSPs)
scaffold0072 (101-227)||(53758-53886)
[»] scaffold0058 (1 HSPs)
scaffold0058 (101-175)||(21885-21961)
[»] scaffold1985 (1 HSPs)
scaffold1985 (95-135)||(31-71)


Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 10 - 227
Target Start/End: Original strand, 18962624 - 18962841
Alignment:
Q  10 gcagagagaggaggtatgttggagcagggtgaggtggcggactgtgggggtgtcggtggggggtagtagaaatcggttgtaggataaccatgttcatatt 109  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18962624 gcagagagaggaggtatgttggagcagggtgaggtggtggactgtgggggtgtcggtggggggtagtagaaatcggttgtaggataaccatgttcatatt 18962723  T
Q  110 aattgttttaataagtcggtgtatttttcttctgctgaaagagagtggagtagagttcttgactactaagcagctggagtagttagagtgtgatggaatc 209  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18962724 aattgttttaataagtcggtgtatttttcttctgcggaaagagagtggagtagagttcttgactactaagcagctggagcagttagagtgtgatggaatc 18962823  T
Q  210 ttgatgttttctttgatg 227  Q
    ||||||||||||||||||    
T  18962824 ttgatgttttctttgatg 18962841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 20135654 - 20135520
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||  |||| ||||||| |||||||||| |||||||||||||| || | |    
T  20135654 aaccatgttcatattaattgttttagtaagtcagtgtacttttcttttgctgaagaagaaagtggagcagagttcttgtctactaagcagctgaagcaat 20135555  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||   ||||||||| ||||||||||| ||||||    
T  20135554 tagaacatgatggaattttgatgttttccttgatg 20135520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 22197215 - 22197349
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||  |||| ||||||| |||||||||| |||||||||||||| || | |    
T  22197215 aaccatgttcatattaattgttttagtaagtcagtgtacttttcttttgctgaagaagaaagtggagcagagttcttgtctactaagcagctgaagcaat 22197314  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||   ||||||||| ||||||||||| ||||||    
T  22197315 tagaacatgatggaattttgatgttttccttgatg 22197349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 18182968 - 18183098
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||| ||||| |||||| ||||| ||||||||||||||  |||| ||||||| |||||||||| |||||||| ||||| || | |    
T  18182968 aaccatgttcatattaattattttagtaagtcagtgtacttttcttctgctgaagaagaaagtggagcagagttcttgtctactaagtagctgaagcaat 18183067  T
Q  193 tagagtgtgatggaatcttgatgttttcttt 223  Q
    |||   |||||||||| ||||||||||||||    
T  18183068 taggacgtgatggaattttgatgttttcttt 18183098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 228
Target Start/End: Original strand, 19486882 - 19487028
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||||||||| |||||||||| |||| || || ||||||||||||||||  |||| |||  ||  || |||||||||||||| ||    
T  19486882 ggttggagtataaccatgttcatatgaattgttttagtaagacgatgcatttttcttctgctgaggaagatagtaaagctgatttcttgactactaaaca 19486981  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatga 228  Q
    |||| || |||||||  ||||| | ||||| ||||||||||| ||||    
T  19486982 gctgaagcagttagaacgtgataggatcttaatgttttctttaatga 19487028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 23085433 - 23085506
Alignment:
Q  154 gtggagtagagttcttgactactaagcagctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||||| |||||||||| |||||||||||||| |  |||||||| |||||||||| |||||||||||| |||||    
T  23085433 gtggagcagagttcttgtctactaagcagctgaaacagttagagcgtgatggaattttgatgttttctctgatg 23085506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 5295514 - 5295569
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttct 139  Q
    ||||| || |||||||||||||| |||||||||||| |||||||||||||||||||    
T  5295514 ggttggagtataaccatgttcatgttaattgttttagtaagtcggtgtatttttct 5295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 223
Target Start/End: Original strand, 8761344 - 8761485
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||| ||||| ||||| ||||  ||| ||||| | |||||||||||  ||  ||||||||||| ||||||||| |||||||| ||    
T  8761344 ggttggagtataaccatgtccatatcaattgctttagcaagacggtgcaattttcttctgcgaaagaagagagtggagcagagttcttaactactaaaca 8761443  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttcttt 223  Q
    | || || |||| ||| ||||||||||  | |||||||||||    
T  8761444 gttgaagcagttggagcgtgatggaattcttatgttttcttt 8761485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 23081100 - 23081050
Alignment:
Q  98 catgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  23081100 catgttcatattaattgttttagtaagtcggtgtatttctcttcttctgaa 23081050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 21567598 - 21567726
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| |||| |||| ||||| ||||||||||||| ||  ||||| ||||||| || |||||||| || |||||| || || ||||| |      
T  21567598 gttcatatcaattgctttagtaagacggtgcatttttcttctgcggaagaagagggtggagttgaattcttgaccacgaagcagatgaagcagttaaaac 21567697  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  |||||| ||||||||||    
T  21567698 gtgatggaattctgatgtattctttgatg 21567726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 30678614 - 30678725
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||||||||| ||||||||||||| ||||    || |||||||||||||||||  |||||||| ||  |||||||||||||||| |||    
T  30678614 ggttggagtataaccatgttcacattaattgttttagtaagaaa-tgcatttttcttctgctgaagaagagagtgaagctgagttcttgactactacgca 30678712  T
Q  182 gctggagtagtta 194  Q
    |||| || |||||    
T  30678713 gctgaagcagtta 30678725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 25770526 - 25770391
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||||||||||| ||||| |||| |  |  ||||||||||||||||  ||||||||| ||| || || |||||||||||  || || || |    
T  25770526 ataaccgtgttcatattaattattttagtaagacaatacatttttcttctgctgaggaagagagtgaagttgacttattgactactaaatagttgaagca 25770427  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgat 226  Q
    ||||||  |  ||||||||||||||||||| |||||    
T  25770426 gttagaacgatatggaatcttgatgttttccttgat 25770391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 18405545 - 18405675
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| |||| |||||||| ||| || |||||||| |||||||||||  | || ||||| | | |||| ||| |||| ||||||||| || |||    
T  18405545 aaccatgttcacattacttgttttagtaaatcagtgtatttctcttctgctgaagaggaaagtggcgcaaagtttttgtctaccaagcagctgaagcagt 18405644  T
Q  193 tagagtgtgatggaatcttgatgttttcttt 223  Q
    ||||  ||||||| ||  |||||||||||||    
T  18405645 tagaacgtgatggtattctgatgttttcttt 18405675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 19455697 - 19455569
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||||| || ||  ||||||||||| ||||||| |  ||||||| ||| || || |||| |||     
T  19455697 gttcatatcaattgctttagcaagacggtgcatttttcttcttcttaagaagagagtggagcagagttcctatctactaaacagttgaagcagttggagc 19455598  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  | |||||||||||||||    
T  19455597 gtgatggaattcttatgttttctttgatg 19455569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 21474274 - 21474146
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    ||||||||||||||||||| |||| ||||  ||||||||||||||||  ||||  ||| ||| ||||| |||||||||||  || || || || ||||      
T  21474274 gttcatattaattgttttagtaagacggtacatttttcttctgctgaggaagaaggtgaagttgagttgttgactactaaatagatgaagcagctagaac 21474175  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||| |||||||| ||||||    
T  21474174 gtgatgagatcttaatgttttccttgatg 21474146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 15462005 - 15461882
Alignment:
Q  106 tattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagtgtgat 203  Q
    ||||||||||||||| ||| ||||| |||||||||||   ||  |||||||||||| ||||||  | |||||||| ||| || || |||| ||  | |||    
T  15462005 tattaattgttttaacaagacggtgcatttttcttctatggaagaagagagtggagcagagtttctaactactaaacagttgaagcagttggaacgagat 15461906  T
Q  204 ggaatcttgatgttttctttgatg 227  Q
    |||||| | |||||||||||||||    
T  15461905 ggaatccttatgttttctttgatg 15461882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 22436549 - 22436504
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttctt 140  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||    
T  22436549 aaccatgttcatattaattgttttagcaagtcagtgtatttctctt 22436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 24516021 - 24516149
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||||||||  ||| ||||| ||||||||||||| ||  |||||||||||| | | ||| | |||||||| ||| |  || |||| |||     
T  24516021 gttcatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagagagtggagcaaaattcctaactactaaacagttaaagcagttggagc 24516120  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||| | |||  |||||||||||||||||    
T  24516121 gtgacgtaattctgatgttttctttgatg 24516149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 4944 - 4803
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||| | |||| ||||||||||||||    
T  4944 ggttggagtataaccatgttcatattaattgtttcaataagtcggtatatttttcttctgctgaagaagagagtggagcaaagttattgactactaagca 4845  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttcttt 223  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  4844 gctgaagtagttagagcgtgatggaatcttgatgttttcttt 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 15627340 - 15627195
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||  |||||||| |||||||||||    
T  15627340 ggttggagtataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgcggaagaagagagtggagcggagttcttaactactaagca 15627241  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||| ||  ||||||| |||||| ||||||||||||||||||||||    
T  15627240 gctgaagctgttagagcgtgatgaaatcttgatgttttctttgatg 15627195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 14042500 - 14042366
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||| ||||| ||||||||||||||| |||||||||||  |||| ||||| | |||||||||| |||||||||||||| || | |    
T  14042500 aaccatgttcacattaatttttttagtaagtcggtgtatttctcttctgctgaagaagaaagtggcgcagagttcttgtctactaagcagctgaagcaat 14042401  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||| |||| ||||||||||||||||||    
T  14042400 tagatcgtgatagaattttgatgttttctttgatg 14042366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 14352530 - 14352396
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||| ||||| ||||||||||||||| |||||||||||  |||| ||||| | |||||||||| |||||||||||||| || | |    
T  14352530 aaccatgttcacattaatttttttagtaagtcggtgtatttctcttctgctgaagaagaaagtggcgcagagttcttgtctactaagcagctgaagcaat 14352431  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||| |||| ||||||||||||||||||    
T  14352430 tagatcgtgatagaattttgatgttttctttgatg 14352396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 12798942 - 12799078
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||||||||| |||  |||| ||||| ||||||||||||||||  ||||||||||||| |||||| | ||||| || ||| || || |    
T  12798942 ataaccgtgttcatattaattgctttggtaagacggtgcatttttcttctgctgaagaagagagtggagttgagttcctaactacgaaacagttgaagca 12799041  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||| ||| ||||||||||  |||||||||||||||||    
T  12799042 gttggagcgtgatggaattctgatgttttctttgatg 12799078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 15100052 - 15100180
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||| ||| ||||| ||||||||||||||||  ||||||||||||  |||||| |  ||||||| ||| || || |||| |||     
T  15100052 gttcatatcaattgctttaacaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctatctactaaacagttgaagcagttggagc 15100151  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  |||||||||||||||||    
T  15100152 gtgatggaattctgatgttttctttgatg 15100180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 16069746 - 16069870
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||||||||| |||| |||| ||||| ||||||||||||||||  ||||||||||||  |||||| | |||| ||| ||| || || |||| |||     
T  16069746 gttcatattaattgctttagtaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctaactaataaacagttgaagcagttggagc 16069845  T
Q  199 gtgatggaatcttgatgttttcttt 223  Q
    ||||||||||  |||||||||||||    
T  16069846 gtgatggaattctgatgttttcttt 16069870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 14140479 - 14140357
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| || ||||||| |||| ||||  ||||||||||||||||  ||||| ||||||| |||||||||| ||| |||||| || || |||||||      
T  14140479 gttcatatcaactgttttagtaagacggtacatttttcttctgctgaagaagagggtggagttgagttcttgaatacaaagcagatgaagcagttagaac 14140380  T
Q  199 gtgatggaatcttgatgttttct 221  Q
    |||||||||| ||||||| ||||    
T  14140379 gtgatggaattttgatgtattct 14140357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 13676251 - 13676123
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||||||| |||  ||||||||||| ||||||| |||||||||| ||  || || |||| |||     
T  13676251 gttcatatcaattgctttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagagttcctgactactaaacaattgaagcagttggagc 13676152  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  | |||||||||||||||    
T  13676151 gtgatggaattcttatgttttctttgatg 13676123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 14261686 - 14261822
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| | ||||||||||||| |||| |||| ||||| ||||||||||||||||  ||||||| | ||  |||||||||||||| || ||| || || |    
T  14261686 ataaccgtattcatattaattgctttagtaagacggtgcatttttcttctgctgaggaagagagcgaagctgagttcttgactacaaaacagttgaagca 14261785  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  |||||| |||  | |||||||||||||||    
T  14261786 gttagaacgtgatgaaattctaatgttttctttgatg 14261822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 19149819 - 19149683
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||||||||| |||| |||| || |  ||||||||||||||||  ||||||||| ||  |||||||||||||| || ||| || || |    
T  19149819 ataaccgtgttcatattaattgctttagtaagacgatacatttttcttctgctgaagaagagagtgaagctgagttcttgactacgaaacagttgaagca 19149720  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||||||  | |||||||| ||||||    
T  19149719 gttagaacgtgatggaattctaatgttttccttgatg 19149683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 20749218 - 20749082
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||||||||| |||| |||| || |  ||||||||||||||||  ||||||||| ||  |||||||||||||| || ||| || || |    
T  20749218 ataaccgtgttcatattaattgctttagtaagacgatacatttttcttctgctgaagaagagagtgaagctgagttcttgactacgaaacagttgaagca 20749119  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||||||  | |||||||| ||||||    
T  20749118 gttagaacgtgatggaattctaatgttttccttgatg 20749082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 48812792 - 48812851
Alignment:
Q  168 ttgactactaagcagctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||| |||||||||| || |||||||| |||||||||| ||||||||||||||||||    
T  48812792 ttgactagtaagcagctgaagcagttagagcgtgatggaattttgatgttttctttgatg 48812851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 15343231 - 15343107
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| |||| |||| ||||  |||||||||||||||||  |||| ||||||| |||||||||||||| || ||| || || |||||||      
T  15343231 gttcatatcaattgctttagtaagacggtacatttttcttctgctgaagaagagggtggagttgagttcttgactacgaaacagatgaagcagttagaac 15343132  T
Q  199 gtgatggaatcttgatgttttcttt 223  Q
     |||||||||  |||||| ||||||    
T  15343131 atgatggaattctgatgtattcttt 15343107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 223
Target Start/End: Complemental strand, 14957359 - 14957229
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||| || ||  | || ||||| | |||||||||  |||||||||||||| || |      
T  14957359 aaccatgttcatattaattgttttagcaagtcagtgtatttctcttccgccgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaa 14957260  T
Q  193 tagagtgtgatggaatcttgatgttttcttt 223  Q
    | ||  ||||||| || ||||||||||||||    
T  14957259 tggaacgtgatggtattttgatgttttcttt 14957229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 14283838 - 14283951
Alignment:
Q  116 tttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagtgtgatggaatcttga 213  Q
    |||| |||| ||||| ||||||||||||||||  ||||| ||||||| |||||||||||||| || ||  || || |||| ||  ||||||||||  |||    
T  14283838 tttagtaagacggtgcatttttcttctgctgaagaagagggtggagttgagttcttgactacgaaacatatgaagcagtttgaacgtgatggaattctga 14283937  T
Q  214 tgttttctttgatg 227  Q
    ||| ||||||||||    
T  14283938 tgtattctttgatg 14283951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 11385903 - 11386006
Alignment:
Q  126 cggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagtgtgatggaatcttgatgttttcttt 223  Q
    ||||| |||||||||||||||||  |||| ||||||| || ||||||||||| || ||  || || |||||||  ||||||||||  |||||| ||||||    
T  11385903 cggtgcatttttcttctgctgaagaagagggtggagttgaattcttgactacgaaacatatgaagcagttagaacgtgatggaattctgatgtattcttt 11386002  T
Q  224 gatg 227  Q
    ||||    
T  11386003 gatg 11386006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 12690304 - 12690177
Alignment:
Q  98 catgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttag 195  Q
    ||||||||||||||||||||||  ||||| |||||||| ||||| || ||  ||||  |||| | |||||||||  |||||||||||||| || |  | |    
T  12690304 catgttcatattaattgttttagcaagtcagtgtatttctcttccgccgaagaagaatgtggtgcagagttcttatctactaagcagctgaagcaaatgg 12690205  T
Q  196 agtgtgatggaatcttgatgttttcttt 223  Q
    |  ||||||| || ||||||||||||||    
T  12690204 aacgtgatggtattttgatgttttcttt 12690177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 11550567 - 11550697
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||||||||||||  ||||| |||||||  ||||| || ||  | || ||||| | |||||||||  |||||||||||||| || |      
T  11550567 aaccatgttcatattaattgttttagcaagtcagtgtattcctcttccgccgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaa 11550666  T
Q  193 tagagtgtgatggaatcttgatgttttcttt 223  Q
    | ||  ||||||| || ||||||||||||||    
T  11550667 tggaacgtgatggtattttgatgttttcttt 11550697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 18051402 - 18051524
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||| ||| | ||| ||||||||||||||||  ||||||||||||| ||  | ||  |||| |||||| || || |||||||      
T  18051402 gttcatatcaattgctttaacaagactgtgcatttttcttctgctgaagaagagagtggagttgaaattttatctacaaagcagatgaagcagttagaac 18051501  T
Q  199 gtgatggaatcttgatgttttct 221  Q
    ||||||||||  |||||||||||    
T  18051502 gtgatggaattctgatgttttct 18051524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 19615475 - 19615428
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||| |||||||||| |||| ||||| |||||||||||||||||    
T  19615475 gttcatatcaattgttttagtaagacggtgcatttttcttctgctgaa 19615428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 12204241 - 12204377
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||| |||||||||| |||| || |   ||||||||||| |||  ||||||||  ||  ||||||||||| ||||| ||| || |  |    
T  12204241 ataaccgtgttcatatcaattgttttagtaagacgatacttttttcttctgatgaggaagagagtaaagctgagttcttgaccactaaacagttgaaaca 12204340  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  |||||||  |||| |||||||||||||||    
T  12204341 gttagaacgtgatggggtcttaatgttttctttgatg 12204377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 16726848 - 16726901
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| ||||||    
T  16726848 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttccgctgaa 16726901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 17703920 - 17703973
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| ||||||    
T  17703920 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttccgctgaa 17703973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 16630 - 16484
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtattttt-cttctgctgaa--agagagtggagtagagttcttgactactaagc 180  Q
    ||||| || |||| |||||||||||||||||||||||||| ||||| ||||||| |||||||| ||  ||||||||||| |||||| |||||||||||||    
T  16630 ggttggagtataatcatgttcatattaattgttttaataaatcggtatattttttcttctgcttaagaagagagtggagcagagtttttgactactaagc 16531  T
Q  181 agctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  16530 agctgaaacagttagagcgtgatggaatcttgatgttttctttgatg 16484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 41477 - 41343
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||   || ||||| | |||||||||| |||||||||||||| || | |    
T  41477 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcagagttcttgtctactaagcagctgaagcaat 41378  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||| ||||||||||||||||||||||||||||||    
T  41377 tagaatgtgatggaatcttgatgttttctttgatg 41343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 75197 - 75063
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||   || ||||| | |||||||||| |||||||||||||| || | |    
T  75197 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcagagttcttgtctactaagcagctgaagcaat 75098  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||| ||||||||||||||||||||||||||||||    
T  75097 tagaatgtgatggaatcttgatgttttctttgatg 75063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 26208 - 26063
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||| | |  |||||||||| |  ||||| ||||||||||||||    
T  26208 ggttggagtataaccatgttcatattaattgttttaataagtcggtatatttttcttctgttaaagaagagagtggggcggagtttttgactactaagca 26109  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||  || |||||||| ||||||||||||||||| |||||||||||    
T  26108 gctaaagcagttagagcgtgatggaatcttgatgctttctttgatg 26063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 114486 - 114631
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||  |||||||| ||   |||| ||||||||||||||    
T  114486 ggttggagtataaccatgtttatattaattgttttagtaagacggtgcatttttcttctgctgaagaagagagtgaagctaagtttttgactactaagca 114585  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||| || |||||||| |||||||||||||||||||||||||||||    
T  114586 gctgaagcagttagagcgtgatggaatcttgatgttttctttgatg 114631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 23887912 - 23887776
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||||||||||||||||||||||||||||| || | |||||||||||| |||||  ||| ||||||| ||||||||| ||||||||||||||| |  |    
T  23887912 ataaccatgttcatattaattgttttaataagccgatatatttttcttctactgaagaagaaagtggagcagagttcttaactactaagcagctgaatca 23887813  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  |||||||||||||||||||||||||||||    
T  23887812 gttagatcgtgatggaatcttgatgttttctttgatg 23887776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 22989927 - 22989793
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||  | || ||||  | | |||||||| |||||||||||||| || | |    
T  22989927 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtgacgcatagttcttgtctactaagcagctgaagcaat 22989828  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||||||||||||||||||||||    
T  22989827 tagaacgtgatggaatcttgatgttttctttgatg 22989793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 22421791 - 22421925
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaagag---agtggagtagagttcttgactactaagcagctggagtag 191  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||   ||||| | |||||||||| |||||||||||||| || |     
T  22421791 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctg-aagaggtaagtggcgcagagttcttgtctactaagcagctgaagcaa 22421889  T
Q  192 ttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    || ||  |||||||||| ||||||||||||||||||    
T  22421890 ttggaacgtgatggaattttgatgttttctttgatg 22421925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 22523428 - 22523294
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||  |||| ||| | | | |||||||| |||| ||||||||| || | |    
T  22523428 aaccatgttcatattaattgttttagtaagttggtgtatttctcttctgctgaagaagaaagtagcgcaaagttcttgtctaccaagcagctgaagcaat 22523329  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||| ||||||||||| ||||||||||||||||||    
T  22523328 tagaatgtgatggaattttgatgttttctttgatg 22523294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 22246332 - 22246466
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||||  | || ||||| | | | |||||| |||||||||||||| || | |    
T  22246332 aaccatgttcatattagttgttttagtaagtcgatgtatttttcttctgctgaagaggaaagtggtgcataattcttgtctactaagcagctgaagcaat 22246431  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| ||||||||||||||||||    
T  22246432 tagaacgtgatggaattttgatgttttctttgatg 22246466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 21391760 - 21391894
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||| || || ||||||||||||||  |||||||||||  | || ||||| | |||||| ||| |||||||||||||| || |||    
T  21391760 aaccatgttcacattaattattatagtaagtcggtgtattactcttctgctgaggaggaaagtggtgcagagtttttgtctactaagcagctgaagcagt 21391859  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| |||||||||||||||||||||    
T  21391860 tagaacgtgatggtatcttgatgttttctttgatg 21391894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 21781086 - 21781220
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||| || || ||||||||||||||  |||||||||||  | || ||||| | |||||| ||| |||||||||||||| || |||    
T  21781086 aaccatgttcacattaattattatagtaagtcggtgtattactcttctgctgaggaggaaagtggtgcagagtttttgtctactaagcagctgaagcagt 21781185  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| |||||||||||||||||||||    
T  21781186 tagaacgtgatggtatcttgatgttttctttgatg 21781220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 21920003 - 21920137
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| ||||||||||||||| | |||||||||  | || ||||| | |||||| ||| |||||||||||||| || |||    
T  21920003 aaccatgttcacattaattgttttagtaagtcggtgtatttcttttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagt 21920102  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||| || || ||||||||||||||||||    
T  21920103 tagaacgtgacggtattttgatgttttctttgatg 21920137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 22375352 - 22375486
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||  | || ||||| | ||| |||||| |||||||| ||||| |  | |    
T  22375352 aaccatgttcatattaattgttttagtaagtcggtgtatttttcttctgccgacgaggaaagtggcgcagaattcttgtctactaagtagctgaatcaat 22375451  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||| ||||| ||||||||||||||||||    
T  22375452 tagaacgtgaaggaattttgatgttttctttgatg 22375486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 22373753 - 22373617
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||||||||||||||||| |||| ||||  ||||||||||||||||  ||||||||| ||  |||||||||||||||||  || || || |    
T  22373753 ataaccgtgttcatattaattgttttagtaagacggtacatttttcttctgctgaggaagagagtgaagccgagttcttgactactaaatagttgaagca 22373654  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
     |||||  ||||||||||||| ||||| |||||||||    
T  22373653 tttagaacgtgatggaatcttaatgttctctttgatg 22373617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 21253827 - 21253693
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| |||||||||| || ||||||| ||||||| |||||||||||  | || ||||| | |||||| ||| |||||||||||||| || |||    
T  21253827 aaccatgttcacattaattgttatagtaagtcgctgtatttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagt 21253728  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | ||  ||||||| || ||||||||||||||||||    
T  21253727 tggaacgtgatggcattttgatgttttctttgatg 21253693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 21786254 - 21786388
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||| || || ||||||||||||||  |||||||||||  | || ||||| | |||||| ||| |||||||||||||| || |||    
T  21786254 aaccatgttcacattaattattatagtaagtcggtgtattactcttctgctgaggaggaaagtggtgcagagtttttgtctactaagcagctgaagcagt 21786353  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| || ||||||||||||||||||    
T  21786354 tagaacgtgatggtattttgatgttttctttgatg 21786388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 19985064 - 19984935
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||||||||||||||||| |||| || |  ||||||| ||||||||  ||||||||| ||  ||||||||||||||||| ||| || || |    
T  19985064 ataaccgtgttcatattaattgttttagtaagacgatacatttttcgtctgctgaggaagagagtgaagctgagttcttgactactaaacagttgaagca 19984965  T
Q  191 gttagagtgtgatggaatcttgatgttttc 220  Q
    ||||||  ||||||||||||| ||||||||    
T  19984964 gttagaacgtgatggaatcttaatgttttc 19984935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 20390979 - 20390838
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||||||||| |||| ||||| |||| || || ||||||||||||||||  ||||||||  ||  ||||||||||||||||| ||    
T  20390979 ggttggagtataaccatgttcatatcaattattttagtaagacgatgcatttttcttctgctgaggaagagagtaaagctgagttcttgactactaaaca 20390880  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttcttt 223  Q
    |||| || | |||||  ||||||| ||||| |||||||||||    
T  20390879 gctgaagcaattagaacgtgatgggatcttaatgttttcttt 20390838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 21928312 - 21928176
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||||||||| |||| |||| ||||  ||||| || |||||||  ||||||||| ||  ||||||||||||||||| ||| || || |    
T  21928312 ataaccgtgttcatattaattgctttagtaagacggtacattttgctactgctgaggaagagagtgaagctgagttcttgactactaaacagttgaagca 21928213  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||| || || |||||||||||||||    
T  21928212 gttagaacgtgatgggattttaatgttttctttgatg 21928176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 15536265 - 15536173
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctg 185  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||| |||||  | || ||||| | |||||||||  ||||||||||||||    
T  15536265 aaccatgttcatattaattgttttagcaagtcagtgtatttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagcagctg 15536173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 21323167 - 21323312
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||| ||||| ||||||||||  ||| ||||| ||||||||||||| ||  |||||||||||| ||| ||| |  |||| || ||    
T  21323167 ggttggagtataaccatgtccatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagaattcctatctacgaaaca 21323266  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | || ||||||| ||| | ||||||||  | |||||||| ||||||    
T  21323267 gttgaagtagttggagcgcgatggaattcttatgttttccttgatg 21323312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 29301331 - 29301456
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    ||||| ||||| ||||  || ||| ||||| ||||||||||||||||  ||||  ||| ||| |||||||| |||||||||||| || || |||||||      
T  29301331 gttcacattaactgttacaacaagacggtgcatttttcttctgctgaggaagaaggtgaagttgagttcttaactactaagcagttgaagcagttagaac 29301430  T
Q  199 gtgatggaatcttgatgttttctttg 224  Q
    ||||||| || ||||||| |||||||    
T  29301431 gtgatggcattttgatgtgttctttg 29301456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 22042709 - 22042617
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctg 185  Q
    |||||||||||||| ||||||||||  ||||  |||||||| ||||| |||||  | || ||||| | ||||||||| |||||||||||||||    
T  22042709 aaccatgttcatatcaattgttttagcaagttagtgtatttctcttccgctgaagaggaaagtggtgcagagttcttaactactaagcagctg 22042617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 30311043 - 30311135
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctg 185  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| |||||  | || ||||| | |||||||||  ||||||||||||||    
T  30311043 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagcagctg 30311135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 31568732 - 31568870
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||||||||| ||||| ||||| ||| ||||| | ||||||||||| ||  ||||||||| ||| ||||| || | ||| |||||    
T  31568732 ggttggagtataaccatgttcatatcaattgctttaacaagacggtgca-ttttcttctgcggaagaagagagtgaagttgagtttttaaatacgaagca 31568830  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttct 221  Q
      || || |||||||  ||||||||||  |||||||||||    
T  31568831 aatgaagcagttagaacgtgatggaattctgatgttttct 31568870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 22028185 - 22028261
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactac 175  Q
    |||||||| |||||||||| |||| ||||| |||||||||||| |||  ||||| ||| ||| ||||||||| ||||    
T  22028185 gttcatataaattgttttagtaagacggtgcatttttcttctgttgaagaagagggtgaagtggagttcttgtctac 22028261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 22129516 - 22129569
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| ||||||    
T  22129516 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttccgctgaa 22129569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 32603027 - 32602974
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| ||||||    
T  32603027 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttccgctgaa 32602974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 11888046 - 11888182
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtattttt-cttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagt 189  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||  ||||||||||| |||||| |||||||||||||||||| |      
T  11888046 ataaccatgttcatattaattgttttaataaatcggtatattttttcttctgttgaagaagagagtggagcagagtttttgactactaagcagctgaaac 11888145  T
Q  190 agttagagtgtgatggaatcttgatgttttctttgat 226  Q
    |||||||| | ||||||||||||||||||||||||||    
T  11888146 agttagagcgggatggaatcttgatgttttctttgat 11888182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 15262065 - 15261931
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||  |||| ||||| | |||||| ||| |||||||||||||| || | |    
T  15262065 aaccatgttcatattaattgttttagtaagtcagtgtatttttcttctactgaagaagaaagtggcgcagagtttttgtctactaagcagctgaagcaat 15261966  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| ||||||||||||||||||    
T  15261965 tagaacgtgatggaattttgatgttttctttgatg 15261931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 18437575 - 18437441
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||  | || ||||| | |||||| ||  |||||||||||||| || |||    
T  18437575 aaccatgttcatagtaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcagt 18437476  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||||||||| |||||||||||||||    
T  18437475 tagaacgtgatggaatcttaatgttttctttgatg 18437441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 226
Target Start/End: Original strand, 12843798 - 12843931
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| ||||||  | || ||||| | | | |||||| |||||||||||| | || |||    
T  12843798 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttatgctgaagaggaaagtggcgcataattcttgtctactaagcagcagaagcagt 12843897  T
Q  193 tagagtgtgatggaatcttgatgttttctttgat 226  Q
    ||||  |||||||||| |||||||||||||||||    
T  12843898 tagaacgtgatggaattttgatgttttctttgat 12843931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 14291214 - 14291350
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||||||||||||||||||| |||| |||| ||||| ||||||||  || ||||  |||||||| ||  ||||||||||||||||| ||  || || |    
T  14291214 ataaccatgttcatattaattgctttagtaagacggtgcatttttctcttgttgaagaagagagtgaagctgagttcttgactactaaacaattgaagca 14291313  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||||||||| |||||||||||||||    
T  14291314 gttagaacgtgatggaatcttaatgttttctttgatg 14291350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 17492286 - 17492152
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| ||| || |||||||| ||||||||||||   || ||||| |  ||||| ||| |||||||||||||| || |||    
T  17492286 aaccatgttcacattaattgttttagtaaatctgtgtatttctcttctgctgaagaggaaagtggcgcggagtttttgtctactaagcagctgaagcagt 17492187  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| || ||||||||||||||||||    
T  17492186 tagaacgtgatggtattttgatgttttctttgatg 17492152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 13318192 - 13318320
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||| ||  |||||||||||| ||||||| | |||||||| ||| || || |||| ||      
T  13318192 gttcatataaattgttttaacaagacggtgtatttttcttctgcggaagaagagagtggaggagagttcctaactactaaacagttgaagcagttggaac 13318291  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    | ||||||||  | |||||||||||||||    
T  13318292 gagatggaattcttatgttttctttgatg 13318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 14579103 - 14579156
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  14579103 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctgaa 14579156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 16825971 - 16826099
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| |||| |||| || || |||||||||||||||||  |||||||||||  |||||| | |||||||| ||| || ||  |||||| |    
T  16825971 gttcatatcaattgctttagtaagacgatgcatttttcttctgctgaagaagagagtggagctgagttcctaactactaaacagttgaagcggttagaat 16826070  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||||||||| || |||||||||||||||    
T  16826071 gtgatggaattttaatgttttctttgatg 16826099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 16832218 - 16832342
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| |||| |||| ||||  |||||||||||||||||  |||| ||||||| |||||||||||||| |||||| || || |||||||      
T  16832218 gttcatatcaattgctttagtaagacggtacatttttcttctgctgaagaagagggtggagttgagttcttgactacgaagcagatgaagcagttagaac 16832317  T
Q  199 gtgatggaatcttgatgttttcttt 223  Q
    |||||||| | ||||||| ||||||    
T  16832318 gtgatggagttttgatgtattcttt 16832342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 11949598 - 11949722
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||||||||  ||| ||||| ||||||||||||| |||  ||||||||||| ||||||| | |||||||| ||| || || |||| |||     
T  11949598 gttcatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagagttcctaactactaaacagttgaagcagttggagc 11949697  T
Q  199 gtgatggaatcttgatgttttcttt 223  Q
    ||||||||||  | |||||||||||    
T  11949698 gtgatggaattcttatgttttcttt 11949722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 15230050 - 15229914
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||| |||||||||| |||| ||||  ||||||||||||||||  ||||||||  ||  ||||||||||| ||||| ||| || |  |    
T  15230050 ataaccgtgttcatatcaattgttttagtaagacggtacatttttcttctgctgaggaagagagtaaagctgagttcttgaccactaaacagttgaaaca 15229951  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||| ||||| |||||||| ||||||    
T  15229950 gttagaacgtgatgggatcttaatgttttccttgatg 15229914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 15235918 - 15235782
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||| |||||||||| |||| ||||  ||||||||||||||||  ||||||||  ||  ||||||||||| ||||| ||| || |  |    
T  15235918 ataaccgtgttcatatcaattgttttagtaagacggtacatttttcttctgctgaggaagagagtaaagctgagttcttgaccactaaacagttgaaaca 15235819  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||| ||||| |||||||| ||||||    
T  15235818 gttagaacgtgatgggatcttaatgttttccttgatg 15235782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 17494085 - 17493957
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| |||||||||||||||||  ||||||||| | ||| ||| | ||||| || ||| || || |||| ||||    
T  17494085 gttcatatcaattgctttagcaagacggtggatttttcttctgctgaagaagagagtggggcagaattcctaactacgaaacagttgaagcagttggagt 17493986  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||| || || |||||||||||||||    
T  17493985 gtgatggcattttaatgttttctttgatg 17493957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 14575420 - 14575297
Alignment:
Q  106 tattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagtgtgat 203  Q
    ||||||||| |||| |||| || || |||||||||||||||||  |||||||| ||  |||||||||||||| || ||| || || |||| ||| |||||    
T  14575420 tattaattgctttagtaagacgatgcatttttcttctgctgaagaagagagtgaagctgagttcttgactacgaaacagttgaagcagttggagcgtgat 14575321  T
Q  204 ggaatcttgatgttttctttgatg 227  Q
    |||||  | |||||||| ||||||    
T  14575320 ggaattataatgttttccttgatg 14575297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 16378624 - 16378746
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| || ||||||| |||| ||||  ||||||||||||||||  ||||| ||| ||| |||||||||| ||| |||||  || || |||||||      
T  16378624 gttcatatcaactgttttagtaagacggtacatttttcttctgctgaagaagagggtgaagttgagttcttgaatacaaagcaaatgaagcagttagaac 16378723  T
Q  199 gtgatggaatcttgatgttttct 221  Q
    |||||||||| ||||||| ||||    
T  16378724 gtgatggaattttgatgtattct 16378746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 223
Target Start/End: Complemental strand, 24185625 - 24185495
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||| || ||  | || ||||| | |||||||||  |||||||||||||| || |      
T  24185625 aaccatgttcatattaattgttttagcaagtcagtgtatttctcttccgccgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaa 24185526  T
Q  193 tagagtgtgatggaatcttgatgttttcttt 223  Q
    | ||  ||||||| || ||||||||||||||    
T  24185525 tggaacgtgatggtattttgatgttttcttt 24185495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 233
Target Start/End: Original strand, 15013450 - 15013591
Alignment:
Q  94 taaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtag 191  Q
    |||| |||||||||| |||||||||| |||| |||||  |||||||||||||||  ||||  ||| |   |||||||||||||| |||||| || || |     
T  15013450 taactatgttcatataaattgttttagtaagacggtgcgtttttcttctgctgaagaagaaggtgaaactgagttcttgactaccaagcagttgaagcaa 15013549  T
Q  192 ttagagtgtgatggaatcttgatgttttctttgatgatgtcc 233  Q
    |||  | ||||||||||||  |||||||| |||||| |||||    
T  15013550 ttaatgagtgatggaatctaaatgttttcgttgatggtgtcc 15013591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 12272777 - 12272649
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||||||||||  ||||||||||||  |||||| | |||||| | ||| || || |||| |||     
T  12272777 gttcatatcaattgctttagcaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctaactactgaacagttgaagcagttggagc 12272678  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||||| ||| || |||||||| ||||||    
T  12272677 gtgatgaaattttaatgttttccttgatg 12272649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 12858177 - 12858313
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||||||||||||||||| |||| ||||  |||| ||||||| |||  || | |||  |   |||||||||||||||||||||||| |  |    
T  12858177 ataaccgtgttcatattaattgttttagtaagacggtacatttctcttctgttgaggaaaaaagtaaaactgagttcttgactactaagcagctgaaaca 12858276  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
     |||||  ||||||  ||||| |||||||||||||||    
T  12858277 attagaacgtgatgagatcttaatgttttctttgatg 12858313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 8745080 - 8745202
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||| ||| | ||| ||||||||||||||||  ||||||||||||| ||  | ||  |||| |||||| || || |||||||      
T  8745080 gttcatatcaattgctttaacaagactgtgcatttttcttctgctgaagaagagagtggagttgaaattttatctacaaagcagatgaagcagttagaac 8745179  T
Q  199 gtgatggaatcttgatgttttct 221  Q
    ||||||||||  |||||||||||    
T  8745180 gtgatggaattctgatgttttct 8745202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 14089112 - 14089065
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||| |||||||||| |||| ||||| |||||||||||||||||    
T  14089112 gttcatatcaattgttttagtaagacggtgcatttttcttctgctgaa 14089065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 16694599 - 16694465
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||| ||||||||||  |||||  ||||||| ||||| |||||  | || ||||| | |||||||||  |||||||||||||| || |      
T  16694599 aaccatgttcatatcaattgttttagcaagtcaatgtatttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaa 16694500  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | ||  | ||||| || ||||||||||||||||||    
T  16694499 tggaacgcgatggtattttgatgttttctttgatg 16694465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 44779686 - 44779639
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||| |||||||||| |||| ||||| |||||||||||||||||    
T  44779686 gttcatatcaattgttttagtaagacggtgcatttttcttctgctgaa 44779639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 17188813 - 17188685
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| || || ||||  ||| ||||| ||||||||||||| |||  |||| ||||||| || ||||||||||| || ||| || || || ||||      
T  17188813 gttcatatcaactgctttagcaagacggtgcatttttcttctgcggaagaagagggtggagttgaattcttgactacgaaacagatgaagcagctagaac 17188714  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  |||||| ||||||||||    
T  17188713 gtgatggaattctgatgtattctttgatg 17188685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 31941342 - 31941214
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||||||||  ||| | ||| ||||||||||||| |||  ||||||||||| ||| ||| | |||||||| ||| || || | || |||     
T  31941342 gttcatataaattgttttagcaagacagtgcatttttcttctgcggaagaagagagtggagcagaattcctaactactaaacagttgaagcaattggagc 31941243  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    | ||||||||  | |||||||||||||||    
T  31941242 gcgatggaattcttatgttttctttgatg 31941214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 10417740 - 10417863
Alignment:
Q  106 tattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagtgtgat 203  Q
    ||||||||||||||| ||| ||||| | ||||||||||  ||  |||||||||||| ||||||  | |||||||| ||| || || |||| ||  | |||    
T  10417740 tattaattgttttaacaagacggtgcacttttcttctgtggaagaagagagtggagcagagtttctaactactaaacagttgaagcagttggaacgagat 10417839  T
Q  204 ggaatcttgatgttttctttgatg 227  Q
    |||||  | |||||||||||||||    
T  10417840 ggaattcttatgttttctttgatg 10417863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 21336932 - 21337066
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||| ||||| | |||||||||| |||||||||||||| || | |    
T  21336932 aaccatgttcatattaattgttttagtaagtcggtgtatttttcttctgctgaagaagaaagtggcgcagagttcttgtctactaagcagctgaagcaat 21337031  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||| ||| ||||||||||||||||||    
T  21337032 tagaacgtgatgaaattttgatgttttctttgatg 21337066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 225
Target Start/End: Complemental strand, 23473943 - 23473811
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||| ||||| | ||| |||||| |||||||||||||| || | |    
T  23473943 aaccatgttcatattaattgttttagtaagtcggtgtatttttcttctgctgaagaagaaagtggtgcagaattcttgtctactaagcagctgaagcaat 23473844  T
Q  193 tagagtgtgatggaatcttgatgttttctttga 225  Q
    ||||  ||||||||||  |||||||||||||||    
T  23473843 tagaacgtgatggaattatgatgttttctttga 23473811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 223
Target Start/End: Original strand, 21983804 - 21983945
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||  ||||| ||  ||  ||||||||||||||||| ||    
T  21983804 ggttggagtataaccatgttcatatcaattgttttagtaagacggtgcatttttcttctgctgaggaagagggtaaagctgagttcttgactactaaaca 21983903  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttcttt 223  Q
    |||| || | |||||  ||||||| ||||| |||||||||||    
T  21983904 gctgaagcaattagaacgtgatgggatcttaatgttttcttt 21983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 22233556 - 22233692
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||||||||||||||||||| |||| |||| ||||| ||||||||||||||||  ||||||||| ||  |||||||||||||| || ||| || || |    
T  22233556 ataaccatgttcatattaattgctttagtaagacggtgcatttttcttctgctgaagaagagagtgaagctgagttcttgactacgaaacagttgaagca 22233655  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||||||  | |||||||| ||||||    
T  22233656 gttagaacgtgatggaattctaatgttttccttgatg 22233692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 25429169 - 25429035
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| ||| || |||||||| |||||||||||  | || ||||| | |||||| ||| |||| ||||||||| || |||    
T  25429169 aaccatgttcacattaattgttttagtaaatcagtgtatttctcttctgctgaagaggaaagtggcgcagagtttttgtctaccaagcagctgaagcagt 25429070  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| || ||||||||||||||||||    
T  25429069 tagaacgtgatggtattttgatgttttctttgatg 25429035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 26736365 - 26736499
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||  | || ||||| | | | || ||| |||  ||||||||| || | |    
T  26736365 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcaaaatttttgtctatgaagcagctgaagcaat 26736464  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||| |||||| ||||||||||||||||||    
T  26736465 tagaacgtggtggaattttgatgttttctttgatg 26736499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 21561652 - 21561748
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaa 178  Q
    ||||| || |||||||||||||||| |||||||||| |||  ||||| ||||||||||||||||  ||||||||  ||  |||||||||||||||||    
T  21561652 ggttggagtataaccatgttcatatcaattgttttagtaaaacggtgcatttttcttctgctgaggaagagagtaaagctgagttcttgactactaa 21561748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 24618640 - 24618695
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttct 139  Q
    ||||| || |||||||||||||| |||||||||||| |||||||||||||||||||    
T  24618640 ggttggagtataaccatgttcatgttaattgttttagtaagtcggtgtatttttct 24618695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 24714871 - 24714926
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttct 139  Q
    ||||| || |||||||||||||| |||||||||||| |||||||||||||||||||    
T  24714871 ggttggagtataaccatgttcatgttaattgttttagtaagtcggtgtatttttct 24714926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 24747899 - 24747954
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttct 139  Q
    ||||| || |||||||||||||| |||||||||||| |||||||||||||||||||    
T  24747899 ggttggagtataaccatgttcatgttaattgttttagtaagtcggtgtatttttct 24747954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 24796024 - 24796163
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||| |||||||||||| ||||| || || ||| ||||| ||||||||||||| ||  |||||||||||| ||||||||| ||||| || ||    
T  24796024 ggttggagtatacccatgttcatatcaattgcttaaacaagacggtgcatttttcttctgcggaggaagagagtggagcagagttcttaactacaaaaca 24796123  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttct 221  Q
    | || || |||| ||  ||||||| ||| |||||| ||||    
T  24796124 gttgaagcagtttgaacgtgatggtatcctgatgtattct 24796163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 448 - 534
Alignment:
Q  83 cggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttc 167  Q
    |||||| || |||||||||| ||||| ||||| ||||  ||| ||||| ||||||||||||| ||  ||||||||||||||||||||    
T  448 cggttggagtataaccatgtccatatcaattgctttagcaagacggtgcatttttcttctgcggaagaagagagtggagtagagttc 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 18781862 - 18781770
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctg 185  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| |||||  | || ||||| | |||||||||  ||||||||||||||    
T  18781862 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagcagctg 18781770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 20824172 - 20824049
Alignment:
Q  106 tattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagtgtgat 203  Q
    ||||||||||||||| ||| ||||| | ||||||||||  |||  ||||||||||| ||||||  | |||||||| ||| || || |||| ||| | |||    
T  20824172 tattaattgttttaacaagacggtgcacttttcttctgtggaagaagagagtggagcagagtttctaactactaaacagttgaagcagttggagcgagat 20824073  T
Q  204 ggaatcttgatgttttctttgatg 227  Q
    |||||  | |||||||||||||||    
T  20824072 ggaattcttatgttttctttgatg 20824049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 21882522 - 21882482
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtattt 135  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  21882522 aaccatgttcatattaattgttttagcaagtcggtgtattt 21882482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 21676478 - 21676525
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||| |||||||||| |||| ||||| |||||||||||||||||    
T  21676478 gttcatatcaattgttttagtaagacggtgcatttttcttctgctgaa 21676525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 23563812 - 23563941
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||||| | |||  ||||||||||| ||||||  |  ||||||| ||| || || |||| |||     
T  23563812 gttcatatcaattgctttagcaagacggtgcatttttcttctacagaagaagagagtggagcagagttgctatctactaaacagttgaagcagttggagc 23563911  T
Q  199 gtgatggaatcttgatgttttctttgatga 228  Q
    ||||||||||  | ||||||||||||||||    
T  23563912 gtgatggaattcttatgttttctttgatga 23563941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 28892591 - 28892714
Alignment:
Q  106 tattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagtgtgat 203  Q
    ||||||||||||||| ||| ||||| | ||||||||||  ||  |||||||||||| ||||||  | |||||||| ||| || || |||| ||  | |||    
T  28892591 tattaattgttttaacaagacggtgcacttttcttctgtggaagaagagagtggagcagagtttctaactactaaacagttgaagcagttggaacgagat 28892690  T
Q  204 ggaatcttgatgttttctttgatg 227  Q
    |||||  | |||||||||||||||    
T  28892691 ggaattcttatgttttctttgatg 28892714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 175793 - 175938
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||||||||||  ||||||||||| ||||||||| ||||||||||||| ||||  ||||||||||| || ||||||||||||||||||    
T  175793 ggttgaagtataaccatgttcattataattgttttagtaagtcggtatatttttcttctgttgaagaagagagtggagcagggttcttgactactaagca 175892  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||| | |||||||||  ||||||||| |||||||||||| |||||    
T  175893 gctgaaatagttagagcatgatggaattttgatgttttctctgatg 175938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 18495 - 18361
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||   || ||||| | |||||| ||| |||||||||||||| ||||||    
T  18495 aaccatgttcacattaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagtagt 18396  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| ||||||||||||||||||    
T  18395 tagaacgtgatggaattttgatgttttctttgatg 18361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 111366 - 111500
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||  || ||||| | |||||| ||| |||||||||||||| || |||    
T  111366 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctgaaaaggaaagtggcgcagagtttttgtctactaagcagctgaagcagt 111465  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||||||||| |||||||| ||||||    
T  111466 tagaacgtgatggaatcttaatgttttccttgatg 111500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 98 - 227
Target Start/End: Complemental strand, 17720 - 17589
Alignment:
Q  98 catgttcatattaattgttttaataagtcggtgtatttttcttctgctg--aaagagagtggagtagagttcttgactactaagcagctggagtagttag 195  Q
    |||||||||||||||||||||  |||||||||||||||||||||| |||   |||| ||||||| |||||| ||| |||||||| ||||| || | ||||    
T  17720 catgttcatattaattgttttgttaagtcggtgtatttttcttctactgtagaagaaagtggagcagagtttttgtctactaagtagctgaagcaattag 17621  T
Q  196 agtgtgatggaatcttgatgttttctttgatg 227  Q
    |  | |||||||| ||||||||||||||||||    
T  17620 aacgcgatggaattttgatgttttctttgatg 17589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 4279 - 4145
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||  | || |||||   |||||| ||| |||||||||||||| || |||    
T  4279 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcacagagtttttgtctactaagcagctgaagcagt 4180  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||   ||||||||||||||||||||||||||||    
T  4179 tagaacatgatggaatcttgatgttttctttgatg 4145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 1297 - 1163
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||   || ||||| |||||||| ||| ||||||||||| || || |||    
T  1297 aaccatgtccatattaattgttttagtaagttggtgtatttctcttctgctgaagaggaaagtggcgtagagtttttgtctactaagcagttgaagcagt 1198  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||||||||||||||||||||||    
T  1197 tagaacgtgatggaatcttgatgttttctttgatg 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 6546 - 6676
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||||||||||  | || ||||| |||||||||||  |||||||||||||| || |||    
T  6546 aaccatgttcatattaattgtttaagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgtagagttcttatctactaagcagctgaagcagt 6645  T
Q  193 tagagtgtgatggaatcttgatgttttcttt 223  Q
    ||||  |||||||||| ||||||||||||||    
T  6646 tagaacgtgatggaattttgatgttttcttt 6676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 194 - 66
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||| ||| ||||| |||||||||||||||||  |||||||||||  |||||| |  ||||||| ||| || || |||| |||     
T  194 gttcatatcaattgctttaacaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctatctactaaacagttgaagcagttggagc 95  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  |||||||||||||||||    
T  94 gtgatggaattctgatgttttctttgatg 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 54482 - 54348
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||  | || ||||| | |||||| ||| ||||||||||| || || |||    
T  54482 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagttgaagcagt 54383  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||||||| ||||||||||||||    
T  54382 tagaacgtgatggaatcttgttgttttctttgatg 54348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 10697 - 10750
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| ||||||    
T  10697 aaccatgttcatataaattgttttagcaagtcagtgtatttctcttccgctgaa 10750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 13352 - 13405
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| ||||||    
T  13352 aaccatgttcatataaattgttttagcaagtcagtgtatttctcttccgctgaa 13405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 41677 - 41598
Alignment:
Q  10 gcagagagaggaggtatgttggagcagggtgaggtggcggactgtgggggtgtcggtggggggtagtagaaatcggttgt 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  41677 gcagagagaggaggtatgttggaggagggtgaggtggcgaactgtgggggtgtcggtgggggatagtagaaatcggttgt 41598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 5952 - 5824
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||  |||| ||||||| |||||||||  |||||||||||||| || | |||||      
T  5952 gttcatattaattgttttagtaagtcggtgtatttttcttcggttgaagaagaaagtggagcagagttcttatctactaagcagctgaagcaattagaac 5853  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  |||||||| | ||||||    
T  5852 gtgatggaattctgatgtttacgttgatg 5824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 14962 - 14886
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactac 175  Q
    |||||||| ||||| |||| |||| ||||| ||||||||||||||||  ||||| ||| ||| ||||||||| ||||    
T  14962 gttcatatcaattgctttagtaagacggtgcatttttcttctgctgaagaagagggtgaagttgagttcttgtctac 14886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 84 - 223
Target Start/End: Original strand, 200916 - 201057
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||||||||| |||||||||| |||| ||||| ||||||||||||| ||  ||||||||  ||| ||||||||||||||||| ||    
T  200916 ggttggagtataaccatgttcatatcaattgttttagtaagacggtgcatttttcttctgcggaggaagagagtaaagttgagttcttgactactaaaca 201015  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttcttt 223  Q
    |||| ||||||||||  ||||||| ||||| |||||||||||    
T  201016 gctgaagtagttagaacgtgatgggatcttaatgttttcttt 201057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 325546 - 325418
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| |||| |||||  ||| ||||| ||||||||||||| |||  ||||||||||| ||| ||| | |||||||| ||| || || |||| |||     
T  325546 gttcatatcaattattttagaaagacggtgcatttttcttctgcggaagaagagagtggagcagaattcctaactactaaacagttgaagcagttggagc 325447  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    | ||||||||  | |||||||||||||||    
T  325446 gcgatggaattcttatgttttctttgatg 325418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 15073177 - 15073041
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||||||||||||||||| |||| ||||  ||||||||||||||||  ||||||||| ||  ||||||||||||| ||| ||| || || |    
T  15073177 ataaccgtgttcatattaattgttttagtaagacggtacatttttcttctgctgaggaagagagtgaagccgagttcttgactaataaacagttgaagca 15073078  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||||| |||||||||||||| |||||||||||||||    
T  15073077 gttagaatgtgatggaatcttaatgttttctttgatg 15073041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 14696917 - 14696783
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||  | || ||||| | | | |||||  |||||||||||||| || | |    
T  14696917 aaccatgttcatattaattgttttagtaagtcagtgtatttttcttctgctgaagaggaaagtggcgcaaaattcttttctactaagcagctgaagcaat 14696818  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| ||||||||||||||||||    
T  14696817 tagaacgtgatggaattttgatgttttctttgatg 14696783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 22632527 - 22632382
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||  | || ||||| | |||||| ||| ||||||||||    
T  22632527 ggttggagtataaccatgttcatattaattgttttagtaaatcggtgtatttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagca 22632428  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | || || |||||||  ||||||| || ||||||||||| ||||||    
T  22632427 gttgaagcagttagaacgtgatggtattttgatgttttcgttgatg 22632382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 14848561 - 14848695
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||  | || ||||| | | |  ||||| |||||||||||||| || | |    
T  14848561 aaccatgttcatattaattattttattaaatcggtgtatttttcttctgctgaagaggaaagtggcgcaaaactcttgtctactaagcagctgaagcaat 14848660  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| ||||||||||||||||||    
T  14848661 tagaacgtgatggaattttgatgttttctttgatg 14848695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 16219046 - 16218912
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||||||||||  | || ||||| | |||||||||| |||  ||||||||| || | |    
T  16219046 aaccatgttcatattaattggtttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcagagttcttgtctatcaagcagctgaagcaat 16218947  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| |||||||||| |||||||    
T  16218946 tagaacgtgatggaattttgatgttttttttgatg 16218912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 16222366 - 16222232
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||||||||||  | || ||||| | |||||||||| |||  ||||||||| || | |    
T  16222366 aaccatgttcatattaattggtttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcagagttcttgtctatcaagcagctgaagcaat 16222267  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| |||||||||| |||||||    
T  16222266 tagaacgtgatggaattttgatgttttttttgatg 16222232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 8708725 - 8708593
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||||||||||||| |||||||||| |||| || || ||||||||||||||||  ||||||||  ||| ||||||||||||||||| || ||| || |    
T  8708725 ataaccatgttcatatcaattgttttagtaagacgatgcatttttcttctgctgaggaagagagtaaagttgagttcttgactactaaacaactgaagca 8708626  T
Q  191 gttagagtgtgatggaatcttgatgttttcttt 223  Q
    |||| |   |||||| ||||| |||||||||||    
T  8708625 gttaaaacatgatgggatcttaatgttttcttt 8708593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 16231 - 16365
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| |||||||||||||||  ||||||||||  | || ||||| | | |||| ||| ||||||| |||||| || |||    
T  16231 aaccatgttcacattaattgttttagtaagtcggtgtatttcccttctgctgaagaggaaagtggcgcaaagtttttgtctactaaacagctgaagcagt 16330  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| || ||||||||||| ||||||    
T  16331 tagaacgtgatggtattttgatgttttccttgatg 16365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 14162286 - 14162152
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||| ||||||||||||||  ||||||||||  || || |||| ||||  ||| || ||||||||||||||| |||| ||||| ||| || |      
T  14162286 aaccatgttcttattaattgttttagcaagtcggtgtccttctcctctgttgaagaagaaagcggagtagagttcttgtctaccaagcaactgaagcaac 14162187  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| ||||||||||| ||||||    
T  14162186 tagaacgtgatggaattttgatgttttccttgatg 14162152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 16352726 - 16352860
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||| |  ||  | || ||||| | |||||||||| |||||||||||||| || |      
T  16352726 aaccatgttcatattaattgttttagcaagtcagtgtatttctcttccgtcgaagaggaaagtggtgcagagttcttgtctactaagcagctgaagcaac 16352825  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | ||  | ||||| || ||||||||||||||||||    
T  16352826 tggaacgcgatggtattttgatgttttctttgatg 16352860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 223
Target Start/End: Complemental strand, 14683383 - 14683253
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||||||||||||  | ||| |||||||| ||||| || ||  | || ||||| | |||||||||  |||||||||||||| || |      
T  14683383 aaccatgttcatattaattgttttagcatgtcagtgtatttctcttccgccgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaa 14683284  T
Q  193 tagagtgtgatggaatcttgatgttttcttt 223  Q
    | ||  ||||||| || ||||||||||||||    
T  14683283 tggaacgtgatggtattttgatgttttcttt 14683253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 208
Target Start/End: Original strand, 14993829 - 14993938
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||||||||| |||| |||| ||||| |||||||||||||| |  ||| ||||||||  || ||| | |||||||| ||| || || |||| |||     
T  14993829 gttcatattaattgctttagtaagacggtgcatttttcttctgctaaagaagtgagtggagctgaattcctaactactaaacagttgaagcagttggagc 14993928  T
Q  199 gtgatggaat 208  Q
    ||||||||||    
T  14993929 gtgatggaat 14993938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 16251046 - 16251131
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaa 178  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| |||||  | || ||||| | ||||||||| ||||||||    
T  16251046 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttccgctgaagaggaaagtggtgcagagttcttaactactaa 16251131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 15258737 - 15258609
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||||||||||  |||||| |||||  |||||| |  ||||||| ||| || || |||| |||     
T  15258737 gttcatatcaattgctttagcaagacggtgcatttttcttctgctgaagaagagactggagctgagttcctatctactaaacagttgaagcagttggagc 15258638  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||| |||||  | |||||||||||||||    
T  15258637 gtgacggaattcttatgttttctttgatg 15258609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 1964 - 2098
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||| ||||  | |||||||||  ||||||| |||||| || | |    
T  1964 aaccatgttcatattaattgttttagtaagtcggtgtatttttcttctgctgaagaagacagtgacgcagagttcttatctactaaacagctgaagcaat 2063  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| || ||||||||||||||||||    
T  2064 tagaacgtgatggtattttgatgttttctttgatg 2098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 227
Target Start/End: Original strand, 47426 - 47557
Alignment:
Q  98 catgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagttag 195  Q
    |||||||| ||||||||||||| ||||||  ||||||| ||||||||||||   || ||||| | |||||| | | |||||||||||||| || ||||||    
T  47426 catgttcacattaattgttttagtaagtcaatgtatttctcttctgctgaagaggaaagtggcgcagagttttagtctactaagcagctgaagcagttag 47525  T
Q  196 agtgtgatggaatcttgatgttttctttgatg 227  Q
    |  ||||||||||||| |||||||||||||||    
T  47526 aacgtgatggaatcttaatgttttctttgatg 47557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 151926 - 151792
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| |||||||||| || |||||||||||||||  ||||||||||  | || ||||| | |||||| ||| |||||||||||||| || |||    
T  151926 aaccatgttcacattaattgttatagtaagtcggtgtatttcgcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagt 151827  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | ||  ||||||| || ||||||||||| ||||||    
T  151826 tggaacgtgatggcattttgatgttttccttgatg 151792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 23992 - 24126
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||  | || ||||| | |||||||||| |||| ||||||||| || | |    
T  23992 aaccatgttcatattaattgttttagtaagtcggtatatttttcttctgctgaagaggaaagtggcgcagagttcttgtctaccaagcagctgaagcaat 24091  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||| ||| ||||||||||||||||||    
T  24092 tagaacgtgatgaaattttgatgttttctttgatg 24126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 151406 - 151278
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||||||||  ||| ||||| ||||||||||||| |||  ||||||||||| ||||||| |  |||| || ||| || || |||| |||     
T  151406 gttcatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagagttcctatctacgaaacagttgaagcagttggagc 151307  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||||| |||||| ||||||||    
T  151306 gtgatggaatcttaatgtttcctttgatg 151278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 4760 - 4626
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||| | |||  ||||||||||| ||| |||||| |||||||||||||| || | |    
T  4760 aaccatgttcatattaattgttttagtaagtcagtatatttttcttctaccgaagaagagagtggagcagaattcttgtctactaagcagctgaagcaat 4661  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  | |||||||| ||||||||||||||||||    
T  4660 tagaacgcgatggaattttgatgttttctttgatg 4626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 14269 - 14216
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||||||||| ||||||||||  ||||| |||||||||||||| ||||||    
T  14269 aaccatgttcatatcaattgttttagcaagtcagtgtatttttcttccgctgaa 14216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 44892 - 45016
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||||||||  ||| ||||| ||||||||||| | |||  ||||||||||| ||||||| | ||||| || ||| || || |||| |||     
T  44892 gttcatatcaattgttttagcaagacggtgcatttttcttctacggaagaagagagtggagcagagttcctaactacgaaacagttgaagcagttggagc 44991  T
Q  199 gtgatggaatcttgatgttttcttt 223  Q
    ||||||||||  | |||||||||||    
T  44992 gtgatggaattcttatgttttcttt 45016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 495865 - 495731
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||  | || ||||| | |||||||||| |||| ||||||||| || | |    
T  495865 aaccatgttcatattaattgttttagtaagtcggtttatttttcttcttctgaagatgaaagtggcgcagagttcttgtctaccaagcagctgaagcaat 495766  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| ||||||||||||||||||    
T  495765 tagaacgtgatggaattttgatgttttctttgatg 495731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 452661 - 452806
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||  ||||||||||||  |||||| | |||||||| ||    
T  452661 ggttggagtataaccatgttcatattaattgttttagtaagacggtgtacttttcttctgctgaagaagagagtggagctgagttcctaactactaaaca 452760  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | || || |||| ||| ||||||||||  | || ||||||||||||    
T  452761 gttgaagcagttggagcgtgatggaattctaatattttctttgatg 452806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 441480 - 441404
Alignment:
Q  148 aagagagtggagtagagttcttgactactaagcagctggagtagttagagtgtgatggaatcttgatgttttctttg 224  Q
    |||||||||||| |||||||||| |||||||||||||| |  ||||||||  ||||||||| ||||| |||||||||    
T  441480 aagagagtggagcagagttcttgtctactaagcagctgaaacagttagagcatgatggaattttgatattttctttg 441404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 16378925 - 16378791
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||||||||||||  ||||| |||||||| |||||||||||  |||||||||||| | |||| ||| |||||||||||||| || | |    
T  16378925 aaccatgttcatattaattgttttagcaagtcagtgtatttctcttctgctgaggaagagagtggagcaaagtttttgtctactaagcagctgaagcaat 16378826  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| | ||||||||||||||||    
T  16378825 tagaacgtgatggaatttagatgttttctttgatg 16378791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 21861901 - 21862035
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||||||||||  ||||  |||| | |||||||||  |||| ||||||||| || | |    
T  21861901 aaccatgttaatattaattgttttattaagtcggtgtatttctcttctgctgaagaagaatgtggcgcagagttcttatctacgaagcagctgaagcaat 21862000  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||||||||| ||||||||||||    
T  21862001 tagaacgtgatggaatcttgatattttctttgatg 21862035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 21751768 - 21751634
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| ||| ||||||||||| |||||| |||||   || ||||| | |||||| ||| ||||||| |||||| || |||    
T  21751768 aaccatgttcacattaattgttttagtaaatcggtgtatttctcttctactgaagaggaaagtggcgcagagtttttgtctactaaacagctgaagcagt 21751669  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||||||||| |||||||||||||||    
T  21751668 tagaacgtgatggaatcttaatgttttctttgatg 21751634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 22359770 - 22359906
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa-agaga-gtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||||||||||||||| ||| |||| ||| || |||||| | |||||||||||| ||| | |||| | |||||| ||| |||||||||||||| ||||    
T  22359770 ataaccatgttcatattatttgctttagtaaatcagtgtatatctcttctgctgaagagaaaagtggtgcagagtttttgtctactaagcagctgaagta 22359869  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||| || ||||| ||||||||||||    
T  22359870 gttagaacgtgatggtattttgattttttctttgatg 22359906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 21739562 - 21739698
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||||||||| |||| |||| ||| | ||||||||||||||||  ||||||||| ||  |||||||| |||||||| ||| || || |    
T  21739562 ataaccgtgttcatattaattgctttagtaagacggcgcatttttcttctgctgaagaagagagtgaagctgagttcttaactactaaacagttgaagca 21739661  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
     || ||| ||||||||||  | |||||||||||||||    
T  21739662 attggagcgtgatggaattctaatgttttctttgatg 21739698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 21743078 - 21743214
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||||| |||||||||| || |||| |||| ||||| ||||||||||||||||  ||||||||| ||   ||||||||||||| || ||| || || |    
T  21743078 ataaccattttcatattaactgctttagtaagacggtgcatttttcttctgctgaagaagagagtgaagctaagttcttgactacgaaacagttgaagca 21743177  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||| ||| ||||||||||  | |||||||||||||||    
T  21743178 gttggagcgtgatggaattataatgttttctttgatg 21743214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 20140907 - 20140780
Alignment:
Q  102 ttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagttagagtg 199  Q
    |||| |||||||| |||| ||||||||||||||| |||| |||||||   || ||||| | | | ||| || |||||||||||||| || |||||||  |    
T  20140907 ttcacattaattgctttagtaagtcggtgtatttctcttatgctgaagaggaaagtggcgcataattcatgtctactaagcagctgaagcagttagaacg 20140808  T
Q  200 tgatggaatcttgatgttttctttgatg 227  Q
    |||||| || ||||||||||||||||||    
T  20140807 tgatggtattttgatgttttctttgatg 20140780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 23196484 - 23196539
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttct 139  Q
    ||||| || |||||||||||||| |||||||||||| |||||||||||||||||||    
T  23196484 ggttggagtataaccatgttcatgttaattgttttagtaagtcggtgtatttttct 23196539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 41311400 - 41311254
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtattttt-cttctgctgaa--agagagtggagtagagttcttgactactaagc 180  Q
    ||||| || |||| ||||| ||||| |||||||||| | || ||||| |||||| |||||||||||  |||||| | ||| |||||||||||||| || |    
T  41311400 ggttggagtataatcatgtccatatcaattgttttagttagacggtgcattttttcttctgctgaagaagagagcgaagttgagttcttgactacgaaac 41311301  T
Q  181 agctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    || || || |||||||  ||||||||||  | |||||||||||||||    
T  41311300 agttgaagcagttagaacgtgatggaattataatgttttctttgatg 41311254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 429685 - 429738
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||| || ||||||||||  | ||||||||||||||| ||||||||||||    
T  429685 aaccatgtgcacattaattgttacagtaagtcggtgtatttctcttctgctgaa 429738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 17042543 - 17042596
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| ||||||    
T  17042543 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttccgctgaa 17042596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 19857130 - 19857062
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttc 167  Q
    |||||||| ||||||||||  ||| | ||| ||||||||||||||||  |||||||||||| |||||||    
T  19857130 gttcatatcaattgttttagcaagacagtgcatttttcttctgctgaagaagagagtggagcagagttc 19857062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 20833434 - 20833562
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||||||||  ||| ||||| ||||||||||| | ||  |||||||||||| ||| ||| | |||| ||| ||| || || |||| |||     
T  20833434 gttcatatcaattgttttagcaagacggtgcatttttcttctacggaagaagagagtggagcagaattcctaactattaaacagttgaagcagttggagc 20833533  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    | ||||||||  | |||||||||||||||    
T  20833534 gcgatggaattcttatgttttctttgatg 20833562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 21233259 - 21233312
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| ||||||    
T  21233259 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttccgctgaa 21233312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 22016279 - 22016407
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||||||| ||  |||| |||||||  |||||| | ||||||||  || || || |||| |||     
T  22016279 gttcatatcaattgctttagcaagacggtgcatttttcttctgcagaagaagatagtggagctgagttcctaactactaaatagatgaaggagttggagc 22016378  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||||||||| || |||||||| ||||||    
T  22016379 gtgatggaattttaatgttttccttgatg 22016407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 24404 - 24538
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa-ag-agagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||| || | ||||| | |||||| ||| |||||||||||||| || |||    
T  24404 aaccatgttcatattaattgttttagtaaatcggtgtatttctcttctgctgaagagaaaagtggtgcagagtttttgtctactaagcagctgaagcagt 24503  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| |||||| |||||||||||    
T  24504 tagaacgtgatggaattttgatgatttctttgatg 24538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 10237 - 10360
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||||||||  ||| ||||| ||||||||| ||| |||  ||||||||||| ||||||| | |||||||| ||| || || |||| |||     
T  10237 gttcatatcaattgttttagcaagacggtgcatttttcttttgcggaagaagagagtggagcagagttcctaactactaaacagttgaagcagttggagc 10336  T
Q  199 gtgatggaatcttgatgttttctt 222  Q
    ||||||||||  | ||||||||||    
T  10337 gtgatggaattcttatgttttctt 10360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 23746 - 23890
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||||||||| |||||||||| ||| ||||||||||||||||||||||  ||  |||||||||||| |||||||||| | ||||||||    
T  23746 ggttggagtataaccatgttcacattaattgttataacaagtcggtgtatttttcttctgtcgaataagagagtggagcagagttcttgtcaactaagca 23845  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgat 226  Q
    |||| |  |||||||| |||||| ||| || |||||||| |||||    
T  23846 gctgaaccagttagagcgtgatgaaattttaatgttttcattgat 23890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 9809 - 9944
Alignment:
Q  94 taaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtag 191  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||  ||  ||||||||| || |||||||||| ||||||| || ||| |  ||    
T  9809 taaccatgttcacattaattgttataataagtcggtgtatttttcttttgtcgaagaagagagtgcagcagagttcttgtctactaatcaactgaaacag 9908  T
Q  192 ttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||||| |||||||||| || || ||||||||||||    
T  9909 ttagagcgtgatggaattttaatattttctttgatg 9944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 14725 - 14859
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||  | || ||||| | | | |||||| |||||||||||||| || | |    
T  14725 aaccatgttcatattaattgttttagtaagttggtgtatttttcttctgctgaagaggaaagtggcgcataattcttgtctactaagcagctgaagcaat 14824  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| || |||||||||||||||    
T  14825 tagaacgtgatggaattttaatgttttctttgatg 14859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 13938 - 14072
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||  | || ||||| | | | |||||| |||||||||||||| ||   |    
T  13938 aaccatgttcatattaattgttttagtaagtcagtgtatttttcttctgctgaagaggaaagtggcgcataattcttgtctactaagcagctgaagctat 14037  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| ||||||||||||||||||    
T  14038 tagaacgtgatggaattttgatgttttctttgatg 14072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 175828 - 175699
Alignment:
Q  100 tgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagag 197  Q
    ||||||||| |||||||||| |||| || |  |||||||||||||||   ||||||||| ||| ||||||||||||||||| ||| || ||||||||||     
T  175828 tgttcatatcaattgttttagtaagacgatacatttttcttctgctggggaagagagtgaagttgagttcttgactactaaacagttgaagtagttagaa 175729  T
Q  198 tgtgatggaatcttgatgttttctttgatg 227  Q
     |||||||||| ||||||||||||||||||    
T  175728 cgtgatggaattttgatgttttctttgatg 175699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 99048 - 99176
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||||||||  ||| ||||| ||||||||||||| ||  |||||||||||| ||| ||| | |||||||| ||| || ||||||| |||     
T  99048 gttcatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagaattcctaactactaaacagttgaagtagttggagc 99147  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |  |||||||  | |||||||||||||||    
T  99148 gcaatggaattcttatgttttctttgatg 99176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 233
Target Start/End: Complemental strand, 6718 - 6578
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||  | || |||||   |||||||||  |||| ||||||||| || | |    
T  6718 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcacagagttcttatctaccaagcagctgaagcaat 6619  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatgatgtcc 233  Q
    ||||  |||||||||| || ||||||||||||||| |||||    
T  6618 tagaacgtgatggaattttaatgttttctttgatggtgtcc 6578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 233
Target Start/End: Complemental strand, 13848 - 13708
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||  | || |||||   |||||||||  |||| ||||||||| || | |    
T  13848 aaccatgttcatattaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcacagagttcttatctaccaagcagctgaagcaat 13749  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatgatgtcc 233  Q
    ||||  |||||||||| || ||||||||||||||| |||||    
T  13748 tagaacgtgatggaattttaatgttttctttgatggtgtcc 13708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 23045 - 23177
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||||||||||||| |||||||||| |||| | ||| ||||||||||||||||  ||||||||  ||  ||||||||||||||||| |||||| || |    
T  23045 ataaccatgttcatatcaattgttttagtaagacagtgcatttttcttctgctgaggaagagagtaaagctgagttcttgactactaaacagctgaagca 23144  T
Q  191 gttagagtgtgatggaatcttgatgttttcttt 223  Q
    | |||| |||||||| ||||| |||||||||||    
T  23145 gctagaatgtgatgggatcttaatgttttcttt 23177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 21644 - 21780
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagta 190  Q
    ||||||||||| ||||||| ||||||| |||| ||||  |||||||||||||||||  |||||||| ||  |||||||||||||||||||||||  || |    
T  21644 ataaccatgtttatattaactgttttagtaagacggtacatttttcttctgctgaagaagagagtgaagctgagttcttgactactaagcagcttaagca 21743  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||| | ||||||||||   ||||||||||||||||    
T  21744 gttagcgcgtgatggaattccgatgttttctttgatg 21780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 24817835 - 24817970
Alignment:
Q  94 taaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtag 191  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||  ||  ||||||||| || |||||||||| ||||||| || ||| |  ||    
T  24817835 taaccatgttcacattaattgttataataagtcggtgtatttttcttttgtcgaagaagagagtgcagcagagttcttgtctactaatcaactgaaacag 24817934  T
Q  192 ttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||||| |||||||||| || || ||||||||||||    
T  24817935 ttagagcgtgatggaattttaatattttctttgatg 24817970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 23105724 - 23105858
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| |||||||||| || ||||||||||||||| ||||||| ||||   || ||||| | |||||| ||| |||||||||||||| ||||||    
T  23105724 aaccatgttcacattaattgttatagtaagtcggtgtatttctcttctgatgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagtagt 23105823  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | ||  ||||||| || ||||||||||||||||||    
T  23105824 tggaacgtgatggcattttgatgttttctttgatg 23105858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 22733770 - 22733904
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| |||||||||| || ||||||||||| ||| |||||||||||  | || ||||| | |||||| ||| |||||||||||||| || |||    
T  22733770 aaccatgttcacattaattgttatagtaagtcggtgtttttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagt 22733869  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
     |||  ||||||| || ||||||||||||||||||    
T  22733870 aagaacgtgatggtattttgatgttttctttgatg 22733904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 23098012 - 23098148
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||| ||||||||||  ||| ||||| ||||||||||||||||  ||||| ||||||| || ||||||||||| || ||| || || |    
T  23098012 ataaccgtgttcatatcaattgttttagcaagacggtgcatttttcttctgctgaagaagagggtggagttgaattcttgactacgaaacagatgaagca 23098111  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||||||  |||||| ||||||||||    
T  23098112 gttagaacgtgatggaattctgatgtattctttgatg 23098148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 23074310 - 23074176
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| |||||||||| || ||||||||||||||| |||||||||||  | || ||||| | | |||| ||  |||| ||||||||| || |||    
T  23074310 aaccatgttcacattaattgttatagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcaaagtttttatctaccaagcagctgaagcagt 23074211  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| || ||||||||||||||||||    
T  23074210 tagaacgtgatggtattttgatgttttctttgatg 23074176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 23113172 - 23113079
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagct 184  Q
    |||||| |||| |||| |||||||||| |||| || |  ||||||||||||||||  ||||||||  ||| ||||||||||||||||| |||||    
T  23113172 ataaccgtgtttatataaattgttttagtaagacgatacatttttcttctgctgaggaagagagtaaagttgagttcttgactactaaacagct 23113079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 27790198 - 27790059
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||  |||||||| ||||| ||||| ||| | ||| ||||||||||||||||  ||||||||||||| ||  | ||  |||| |||||    
T  27790198 ggttggagtataaccgagttcatatcaattgctttaacaagactgtgcatttttcttctgctgaagaagagagtggagttgaaattttatctacaaagca 27790099  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttct 221  Q
    | || || |||||||  ||||||||||  |||||||||||    
T  27790098 gatgaagcagttagaacgtgatggaattctgatgttttct 27790059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 12576794 - 12576672
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||| ||| | ||| ||||||||||||||||  ||||||||||||| ||  | ||  |||| |||||| || || |||||||      
T  12576794 gttcatatcaattgctttaacaagactgtgcatttttcttctgctgaagaagagagtggagttgaaattttatctacaaagcagatgaagcagttagaac 12576695  T
Q  199 gtgatggaatcttgatgttttct 221  Q
    ||||||||||  |||||||||||    
T  12576694 gtgatggaattctgatgttttct 12576672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 11351707 - 11351753
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttc 141  Q
    |||||||||||||||||||||||||  ||||| |||||||| |||||    
T  11351707 aaccatgttcatattaattgttttagcaagtcagtgtatttctcttc 11351753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 23204761 - 23204672
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcag 182  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| |||||  | |||||||  | |||||||||  |||||||||||    
T  23204761 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttccgctgaagaggagagtgatgcagagttcttatctactaagcag 23204672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 1066209 - 1066149
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgc 144  Q
    ||||| || |||||||||||||||| ||||| |||| |||| ||||||| ||| |||||||    
T  1066209 ggttggagaataaccatgttcatatcaattgctttagtaagacggtgtactttccttctgc 1066149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 723 - 593
Alignment:
Q  99 atgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaa--gagagtggagtagagttcttgactactaagcagctggagtagttaga 196  Q
    ||||||| ||||||||||||| |||||| |||||||| ||||||||| ||   |||||||| | |||||| ||| |||||||||||||| || |||||||    
T  723 atgttcacattaattgttttagtaagtcagtgtatttctcttctgctaaagaggagagtggcgcagagtttttgtctactaagcagctgaagcagttaga 624  T
Q  197 gtgtgatggaatcttgatgttttctttgatg 227  Q
      |||||||||| |||||||||||| |||||    
T  623 acgtgatggaattttgatgttttctctgatg 593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 827 - 777
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgct 145  Q
    ||||||||||| ||||||||||||| |||||| |||||||| |||||||||    
T  827 aaccatgttcacattaattgttttagtaagtcagtgtatttctcttctgct 777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 204
Target Start/End: Original strand, 15427 - 15549
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||||||||| |||||||||| ||| ||||| ||||||||||||||||  ||  |||||||||||| |||||||||| ||||||||||    
T  15427 ggttggagtataaccatgttcacattaattgttataacaagtcagtgtatttttcttctgtcgaagaagagagtggagcagagttcttgtctactaagca 15526  T
Q  182 gctggagtagttagagtgtgatg 204  Q
    |||| |  |||||||| ||||||    
T  15527 gctgaaacagttagagcgtgatg 15549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 12673 - 12806
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||| | ||||||||| |||||||||||  | || ||||| | ||||||| |  |||||||||||||| || |||    
T  12673 aaccatgttcatattaattgttttagtaaattggtgtatttctcttctgctgaagaggaaagtggtgcagagttc-tatctactaagcagctgaagcagt 12771  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||||||||||||||| ||||||    
T  12772 tagaacgtgatggaatcttgatgttttccttgatg 12806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 25171 - 25305
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| |||||||||| || ||||||||||||||| |||||||||||  | || ||||| | |||||| ||| |||||||||||||| || |||    
T  25171 aaccatgttcacattaattgttatagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagt 25270  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | || |||||||| || ||||||||||| ||||||    
T  25271 tggaatgtgatggcattttgatgttttccttgatg 25305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 227
Target Start/End: Original strand, 1196 - 1326
Alignment:
Q  99 atgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaagag---agtggagtagagttcttgactactaagcagctggagtagttag 195  Q
    |||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||   ||||| | |||||| ||| |||||||| ||||| || ||||||    
T  1196 atgttcatattatttgttttagtaagtcggtgtatttctcttctgct-aaagaggaaagtggcgcagagtttttgtctactaagtagctgaagcagttag 1294  T
Q  196 agtgtgatggaatcttgatgttttctttgatg 227  Q
    |  ||||||| || ||||||||||||||||||    
T  1295 aacgtgatggtattttgatgttttctttgatg 1326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 4546 - 4682
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||| || ||||||| |||| ||||  |||| |||||||||||  |||| |||  ||  |||||||||||||||||||||||| ||||    
T  4546 ataaccgtgttcatatcaactgttttagtaagacggtacatttctcttctgctgaggaagaaagtaaagctgagttcttgactactaagcagctgaagta 4645  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||| ||||| |||||||||||||||    
T  4646 gttagaacgtgatgggatcttaatgttttctttgatg 4682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 29374 - 29238
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||||||||||||||||| ||||  |||  ||||||||| || |||  ||||||||| ||  ||||||||||||||||| ||| || || |    
T  29374 ataaccgtgttcatattaattgttttagtaagatggtacatttttcttatgttgaggaagagagtgaagctgagttcttgactactaaacagttgaagca 29275  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  |||||||||||||||||||||| ||||||    
T  29274 gttagaacgtgatggaatcttgatgttttccttgatg 29238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 11807 - 11671
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||||||||| |||| |||| ||||  ||||||||||||||||  ||||||||| ||  ||||||||||||||||| ||| || || |    
T  11807 ataaccgtgttcatattaattgctttagtaagacggtacatttttcttctgctgaggaagagagtgaagctgagttcttgactactaaacagttgaagca 11708  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||| || || |||||||||||||||    
T  11707 gttagaacgtgatgggattttaatgttttctttgatg 11671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 60586 - 60450
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||||||||| |||| |||| ||||| ||||||||||||||||  |||| |||| ||  ||||||||||||||||| ||| || || |    
T  60586 ataaccgtgttcatattaattgctttagtaagacggtgcatttttcttctgctgaagaagaaagtgaagctgagttcttgactactaaacagttgaagca 60487  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
     |||||| ||||||| || || |||||||||||||||    
T  60486 tttagagcgtgatgggattttaatgttttctttgatg 60450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 79279 - 79343
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    ||||| || |||||||||| ||||| ||||| |||| ||||  |||| |||||||||||||||||    
T  79279 ggttggagtataaccatgtccatatcaattgctttagtaagatggtgcatttttcttctgctgaa 79343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 225
Target Start/End: Original strand, 216879 - 217011
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||   || ||||| | | | |||||| |||||||||||||| |  | |    
T  216879 aaccatgttcatattaattgttttagtaagtcggtgtatttttcttctgctgaagcggaaagtggcgcaaaattcttgtctactaagcagctgaaacaat 216978  T
Q  193 tagagtgtgatggaatcttgatgttttctttga 225  Q
    ||||  | ||||| || ||||||||||||||||    
T  216979 tagaacgcgatgggattttgatgttttctttga 217011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 7118 - 7252
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| || ||||||| || ||||||||||||||| |||||||||||  | || ||||| | ||| || ||| |||||||||||||| || |||    
T  7118 aaccatgttcacatgaattgttctagtaagtcggtgtatttctcttctgctgaagaggaaagtggcggagaatttttgtctactaagcagctgaagcagt 7217  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| || ||||||||||||||||||    
T  7218 tagaacgtgatggtattttgatgttttctttgatg 7252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 4428 - 4294
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||  | || ||| | | |||||||||  ||||||| |||||| || | |    
T  4428 aaccatgttcacattaattgttttagtaagtcggtgtatttctcttctgctgaagaggaaagttgcgcagagttcttatctactaaacagctgaagcaat 4329  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||| ||| ||||||||||||||||||    
T  4328 tagaacgtgatgaaattttgatgttttctttgatg 4294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 3446 - 3312
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| ||||||||||||||| |||||||| ||  | || ||||| | |||||| ||  ||||||| |||||| || |||    
T  3446 aaccatgttcacattaattgttttagtaagtcggtgtatttctcttctgcggaagaggaaagtggcgcagagtttttatctactaaacagctgaagcagt 3347  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  || ||||||| ||||||||||||||||||    
T  3346 tagaacgttatggaattttgatgttttctttgatg 3312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 104072 - 103938
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| |||| ||||||||  |||||||||||||| |||||||||||  | || ||||| | |||||| ||| |||| ||||||||| || | |    
T  104072 aaccatgttcacattacttgttttagcaagtcggtgtatttctcttctgctgaagaggaaagtggcgcagagtttttgtctaccaagcagctgaagcaat 103973  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  |||||||||| ||||||||||||||||||    
T  103972 tagaacgtgatggaattttgatgttttctttgatg 103938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 228
Target Start/End: Complemental strand, 11686 - 11540
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||||||||| || ||||||| |||| | ||| ||||||||| ||||||  ||||||||  ||| ||||||||||||||||| ||    
T  11686 ggttggagtataaccatgttcatatcaactgttttagtaagacagtgcatttttcttttgctgaggaagagagtaaagttgagttcttgactactaaaca 11587  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatga 228  Q
    |||  || |||||||  ||||||| ||||| || ||||| |||||||    
T  11586 gctaaagcagttagaacgtgatgggatcttaatcttttccttgatga 11540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 8795 - 8661
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| |||||||||| || ||||||||||||||| |||||||||||  | || ||||| | ||| || ||| |||||||||||  | ||||||    
T  8795 aaccatgttcacattaattgttatagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcagattttttgtctactaagcagtcgaagtagt 8696  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | ||  ||||||| || ||||||||||||||||||    
T  8695 tggaacgtgatggcattttgatgttttctttgatg 8661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 17991 - 17857
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| |||||||||| || ||||||||||||||| |||||||||||  | || ||||| | ||| || ||| |||||||||||  | ||||||    
T  17991 aaccatgttcacattaattgttatagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcagattttttgtctactaagcagtcgaagtagt 17892  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | ||  ||||||| || ||||||||||||||||||    
T  17891 tggaacgtgatggcattttgatgttttctttgatg 17857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 40964 - 41098
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||| ||||||| ||||||||||||||| |||||||||||  | || ||||| | | |||| ||| ||||||| ||  || ||||||    
T  40964 aaccatgttcacattaaatgttttagtaagtcggtgtatttctcttctgctgaagaggaaagtggcgcaaagtttttgtctactaaacatttgaagtagt 41063  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| || ||||||||||||||||||    
T  41064 tagaacgtgatggtattttgatgttttctttgatg 41098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 8068 - 7934
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| ||| || |||||||| |||||||||||  | || ||||| | |||||| ||| | | |||||||||| || |||    
T  8068 aaccatgttcacattaattgttttagtaattctgtgtatttctcttctgctgaagaggaaagtggcgcagagtttttgtcaattaagcagctgaagcagt 7969  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| || ||||||||||||||||||    
T  7968 tagaacgtgatggtattttgatgttttctttgatg 7934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 55929 - 56063
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| |||||||||||||||  ||||||||||  | || ||||| | | |||| ||| ||||||| |||||| || |||    
T  55929 aaccatgttcacattaattgttttagtaagtcggtgtatttcccttctgctgaagaggaaagtggcgcaaagtttttgtctactaaacagctgaagcagt 56028  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||  ||||||| || ||||||||||| ||||||    
T  56029 tagaacgtgatggtattttgatgttttccttgatg 56063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 5337 - 5482
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || ||||||||||||| ||| |||||| || |||||||||||||||||||||||  ||  |||| ||||||| |||||||||| |||||||  |    
T  5337 ggttggagtataaccatgttcacattcattgttatagtaagtcggtgtatttttcttctgtcgaagaagatagtggagcagagttcttgtctactaacta 5436  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||| |  |||| ||| |||||||||  || ||||||| |||||||    
T  5437 gctgaaagagttggagcgtgatggaagtttaatgttttatttgatg 5482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 15064 - 14919
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||| ||||| ||||| |||| |||| || |  ||||||||||||| |||  |||||||||||| |||||| |  ||||||||||    
T  15064 ggttggagtataaccatgtccatatcaattgctttagtaagacgttacatttttcttctgcggaagaagagagtggagtggagttcctatctactaagca 14965  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | || || |||| ||||||||||||||  | |||||||||||||||    
T  14964 gttgaagcagttggagtgtgatggaattcttatgttttctttgatg 14919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 7182 - 7037
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||||||||||| |||||||| |||| ||||  ||| ||||||| ||||  ||||||||| ||  |||||||||||||| |||||    
T  7182 ggttggagtataaccatgttcatattagttgttttagtaagacggtacattattcttcttctgaagaagagagtgaagctgagttcttgactaccaagca 7083  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||   | |||||| | ||||||||||   ||||||||||||||||    
T  7082 gctaaggcagttagcgcgtgatggaattccgatgttttctttgatg 7037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 8494 - 8639
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagca 181  Q
    ||||| || |||||||||||||||||| |||||||| |||| ||||  ||| ||||||| ||||  ||||||||| ||  |||||||||||||| |||||    
T  8494 ggttggagtataaccatgttcatattagttgttttagtaagacggtacattattcttctactgaagaagagagtgaagctgagttcttgactaccaagca 8593  T
Q  182 gctggagtagttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    |||   | |||||| | ||||| ||||   ||||||||||||||||    
T  8594 gctaaggcagttagcgcgtgatagaattccgatgttttctttgatg 8639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 2710 - 2582
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||||||||| |||| |||| ||||| |||||||||| ||||||  |||||||| ||  |||||||||||||| || ||| || ||||||| |||     
T  2710 gttcatattaattgctttagtaagacggtgcatttttcttccgctgaagaagagagtgaagctgagttcttgactacgaaacagttgaagtagttggagc 2611  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  | |||||||| ||||||    
T  2610 gtgatggaattctaatgttttccttgatg 2582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 10251 - 10379
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| |||| |||| ||||  |||||||||||||||||  |||| ||||||| |||||||||||||| || ||| || || |||||||      
T  10251 gttcatatcaattgctttagtaagacggtacatttttcttctgctgaagaagagggtggagttgagttcttgactacgaaacagatgaagcagttagaac 10350  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||||||||| ||||||| ||| ||||||    
T  10351 gtgatggaattttgatgtattccttgatg 10379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 227
Target Start/End: Original strand, 17804 - 17936
Alignment:
Q  97 ccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagtta 194  Q
    ||||||||| |||||||||| || |||||| |||||||| |||||||||||  | || ||||| | |||||| ||| |||||||||||||| || ||||     
T  17804 ccatgttcacattaattgttatagtaagtcagtgtatttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagttg 17903  T
Q  195 gagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||  ||||||| || ||||||||||||| ||||    
T  17904 gaacgtgatggcattttgatgttttcttcgatg 17936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 51659 - 51523
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||||||||||||||||| |||| | ||  ||||||||||| ||||  ||||||||| ||| |||||||||||||||||  || || || |    
T  51659 ataaccgtgttcatattaattgttttattaagactgtacatttttcttctactgaggaagagagtgaagttgagttcttgactactaaatagttgaagca 51560  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||| || || || ||||||||||||    
T  51559 gttagaacgtgatgggattttaatattttctttgatg 51523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 19099 - 19226
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| |||||||||||||||||  ||||||||||| ||||||| || |||| || ||| || || |||| ||||    
T  19099 gttcatatcaattgctttagcaagacggtgcatttttcttctgctgaagaagagagtggagcagagttcctgtctacgaaacagttgaagcagttggagt 19198  T
Q  199 gtgatggaatcttgatgttttctttgat 226  Q
    ||||| |||| || ||||||||||||||    
T  19199 gtgatagaattttaatgttttctttgat 19226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 4707 - 4840
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||||||||||||||||| |||| || |  ||||||||||||||||  ||||||||| ||  |||||| ||||||| || ||| || || |    
T  4707 ataaccgtgttcatattaattgttttagtaagacgatacatttttcttctgctgaggaagagagtgaagctgagttcgtgactacgaaacagttgaagca 4806  T
Q  191 gttagagtgtgatggaatcttgatgttttctttg 224  Q
    | ||||| ||||||| || || ||||||||||||    
T  4807 ggtagagcgtgatgggattttaatgttttctttg 4840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 4346 - 4482
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||| |||||||||| |||| ||||  | ||||||||||| ||  ||||||||  ||  ||||||||||||||||| ||| || | ||    
T  4346 ataaccgtgttcatatcaattgttttagtaagacggtacacttttcttctgcagaggaagagagtaaagctgagttcttgactactaaacagttgaaata 4445  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
     |||||  ||||||| ||||| |||||||||||||||    
T  4446 cttagaacgtgatgggatcttaatgttttctttgatg 4482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 49952 - 49816
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    ||||||| |||||||| ||||| |||| |||| ||||| ||||||||||||| ||  ||||||||| ||  |||||| | |||||||| ||| |  ||||    
T  49952 ataaccaagttcatatcaattgctttagtaagacggtgcatttttcttctgcggaagaagagagtgaagctgagttcctaactactaaacagttcaagta 49853  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||||||  | |||||||||||||||    
T  49852 gttagaacgtgatggaattctaatgttttctttgatg 49816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 29463 - 29335
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||| ||| || || |||||||||||||||||  |||||||||||  |||||| |  ||||||| ||| || || |||| |||     
T  29463 gttcatatcaattgctttaacaagacgatgcatttttcttctgctgaagaagagagtggagctgagttcctatctactaaacagttgaagcagttggagc 29364  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  |||||||||||||||||    
T  29363 gtgatggaattctgatgttttctttgatg 29335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 49645 - 49773
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| |||| |||| ||||| ||||| ||||||||||  ||||  ||| ||| ||||||||| |||| || ||| || ||||| ||||      
T  49645 gttcatatcaattgctttagtaagacggtgcattttgcttctgctgaagaagaaggtgaagttgagttcttgtctacgaaacagatgaagtagctagaac 49744  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||||||||| ||||||| ||||||||||    
T  49745 gtgatggaattttgatgtattctttgatg 49773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 58679 - 58807
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| |||| |||| ||||| ||||| ||||||||||  ||||  ||| ||| ||||||||| |||| || ||| || ||||| ||||      
T  58679 gttcatatcaattgctttagtaagacggtgcattttgcttctgctgaagaagaaggtgaagttgagttcttgtctacgaaacagatgaagtagctagaac 58778  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||||||||| ||||||| ||||||||||    
T  58779 gtgatggaattttgatgtattctttgatg 58807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 65067 - 65195
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| |||| |||| ||||| ||||| ||||||||||  ||||  ||| ||| ||||||||| |||| || ||| || ||||| ||||      
T  65067 gttcatatcaattgctttagtaagacggtgcattttgcttctgctgaagaagaaggtgaagttgagttcttgtctacgaaacagatgaagtagctagaac 65166  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||||||||| ||||||| ||||||||||    
T  65167 gtgatggaattttgatgtattctttgatg 65195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 263065 - 262941
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| |||| |||| ||||  |||||||||||||||||  |||| ||||||| |||||||||||||| || ||| || || |||||||      
T  263065 gttcatatcaattgctttagtaagacggtacatttttcttctgctgaagaagagggtggagttgagttcttgactacgaaacagatgaagcagttagaac 262966  T
Q  199 gtgatggaatcttgatgttttcttt 223  Q
    ||||||||||  |||||| ||||||    
T  262965 gtgatggaattctgatgtattcttt 262941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 21097 - 21033
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    ||||| || ||||||||||| ||||||||||||||| ||||||||||||||| |||||| |||||    
T  21097 ggttggagtataaccatgtttatattaattgttttagtaagtcggtgtatttctcttctactgaa 21033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 10631 - 10509
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    ||||||||||| ||||||||||||| |||||| |||||||| |||||||| ||  | || ||| | |||||||| ||| |||||||||||||| || |||    
T  10631 aaccatgttcacattaattgttttagtaagtcagtgtatttctcttctgcggaagaggaaagtagcgtagagtttttgtctactaagcagctgaagcagt 10532  T
Q  193 tagagtgtgatggaatcttgatg 215  Q
    | ||   ||||||||| ||||||    
T  10531 tggaacctgatggaattttgatg 10509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 8863 - 8733
Alignment:
Q  99 atgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttaga 196  Q
    ||||||| ||||||||||||| ||| || |||||||| |||||||||||  | || ||||| | |||||| ||| |||| ||||||||| || ||||| |    
T  8863 atgttcacattaattgttttagtaaatcagtgtatttctcttctgctgaagaggaaagtggcgcagagtttttgtctaccaagcagctgaagcagttaaa 8764  T
Q  197 gtgtgatggaatcttgatgttttctttgatg 227  Q
     |||||||| ||  | |||||||||||||||    
T  8763 atgtgatggtattctaatgttttctttgatg 8733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 13929 - 13876
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    ||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||    
T  13929 aaccatgttcacattaattgttttagtaagtcggtgtatttctcttctgttgaa 13876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 228
Target Start/End: Original strand, 1729 - 1866
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||||||||||||||||| |||| || |  ||||||||||||| ||  ||||  ||| ||| ||||| ||||||||||| ||| || || |    
T  1729 ataaccgtgttcatattaattgttttagtaagacgatacatttttcttctgcggaggaagaaggtgaagttgagttgttgactactaaacagatgaagca 1828  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatga 228  Q
     || ||  ||||||||||||| |||||||| |||||||    
T  1829 attggaacgtgatggaatcttaatgttttccttgatga 1866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 228
Target Start/End: Original strand, 28742 - 28879
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||||||||||||||||| |||| || |  ||||||||||||| ||  ||||  ||| ||| ||||| ||||||||||| ||| || || |    
T  28742 ataaccgtgttcatattaattgttttagtaagacgatacatttttcttctgcggaggaagaaggtgaagttgagttgttgactactaaacagatgaagca 28841  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatga 228  Q
     || ||  ||||||||||||| |||||||| |||||||    
T  28842 attggaacgtgatggaatcttaatgttttccttgatga 28879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 227
Target Start/End: Original strand, 839 - 971
Alignment:
Q  97 ccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagtta 194  Q
    ||||||||| |||||||||| || ||||||||||||||| |||||| ||||  | || ||||| | | |||| ||  |||| ||||||||| || |||||    
T  839 ccatgttcacattaattgttatagtaagtcggtgtatttctcttctactgaagaggaaagtggcgaaaagtttttatctacaaagcagctgaagcagtta 938  T
Q  195 gagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||  ||||||| || ||||||||||| ||||||    
T  939 gaacgtgatggcattttgatgttttccttgatg 971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 320 - 448
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||||||||| ||||  ||  ||||| ||||||||||||||||  ||||||||||||  |||||| |  ||||||| ||| || || |||| |||     
T  320 gttcatattaattgctttagcaaaacggtgcatttttcttctgctgaagaagagagtggagcggagttcctatctactaaacagttgaagcagttggagc 419  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  |||||||||| ||||||    
T  420 gtgatggaattctgatgttttccttgatg 448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 236 - 289
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    ||||||||||| |||||||||| || ||||||||||||||| ||||||||||||    
T  236 aaccatgttcacattaattgttatagtaagtcggtgtatttctcttctgctgaa 289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 5028 - 4892
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| |||||| || | ||| |||| |||| ||||| |||||||||||||||||  |||||||| ||  |||||||| ||||||||  || || ||||    
T  5028 ataaccgtgttcacatcatttgctttagtaagacggtgcatttttcttctgctgaagaagagagtgaagctgagttcttaactactaaatagttgaagta 4929  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||| | | ||||||||||  | |||||||||||||||    
T  4928 gttggggcgtgatggaattctaatgttttctttgatg 4892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 25072 - 25003
Alignment:
Q  84 ggttgtaggataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaagaga 153  Q
    ||||| || |||||||||||||||||||||| |||| |||| | ||| ||||||||||||||||| ||||    
T  25072 ggttgaagtataaccatgttcatattaattgctttagtaagaccgtgcatttttcttctgctgaaggaga 25003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 43876 - 44012
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctg--aaagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||||||||  |||| |||| | ||| |||||||||||| ||  |||||||||| ||  |||||||||||||| || ||  || || |    
T  43876 ataaccgtgttcatattaatttctttagtaagacagtgcatttttcttctgttgaaaaagagagtgaagctgagttcttgactacgaaacaattgaagca 43975  T
Q  191 gttagagtgtgatggaatcttgatgttttctttgatg 227  Q
    ||||||  ||||||||||  | |||||||||||||||    
T  43976 gttagaacgtgatggaattctaatgttttctttgatg 44012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 3557 - 3429
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||  ||||  ||| ||||| |||||||||||||||||  |||||||||||  |||||| | |||||||| ||| || || |||| |||     
T  3557 gttcatatcaattactttagcaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctaactactaaacagttgaagcagttggagc 3458  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  | |||||||||||||||    
T  3457 gtgatggaattcttatgttttctttgatg 3429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 28923 - 28789
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||| |  ||  | || ||||| | |||||||||| |||||||||||||| || |      
T  28923 aaccatgttcatattaattgttttagcaagtcagtgtatttctcttccgtcgaagaggaaagtggtgcagagttcttgtctactaagcagctgaagcaac 28824  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | ||  | ||||| || ||||||||||||||||||    
T  28823 tggaacgcgatggtattttgatgttttctttgatg 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 36343 - 36297
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttc 141  Q
    |||||||||||||||||||||||||  ||||| |||||||| |||||    
T  36343 aaccatgttcatattaattgttttagcaagtcagtgtatttctcttc 36297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 63984 - 64112
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| |||| |||| || || ||||||||||| |||||  |||||||| ||  |||||||| |||||||| ||| || || |||| |||     
T  63984 gttcatatcaattgctttagtaagacgatgcatttttcttctactgaagaagagagtgaagctgagttcttaactactaaacagttgaagcagttggagc 64083  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  | |||||||||||||||    
T  64084 gtgatggaattctaatgttttctttgatg 64112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 47979 - 48058
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaa 178  Q
    |||||||| |||||||||| |||| ||||| ||||||||||| | ||  |||||||||||| ||||||||| ||||||||    
T  47979 gttcatatcaattgttttagtaagacggtgcatttttcttctacggaagaagagagtggagcagagttcttaactactaa 48058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 223
Target Start/End: Complemental strand, 8103 - 7973
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||| || ||  | || ||||| | |||||||||  |||||||||||||| || |      
T  8103 aaccatgttcatattaattgttttagcaagtcagtgtatttctcttccgccgaagaggatagtggtgcagagttcttatctactaagcagctgaagcaaa 8004  T
Q  193 tagagtgtgatggaatcttgatgttttcttt 223  Q
    | ||  ||||||| || ||||||||||||||    
T  8003 tggaacgtgatggtattttgatgttttcttt 7973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 11815 - 11949
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||| ||||||||||  ||||| |||||||| |||||||  ||  | || ||||| |||||||||||  |||||||||||||| ||||      
T  11815 aaccatgttcatatcaattgttttagcaagtcagtgtatttctcttctgtcgaagaggaaagtggtgtagagttcttatctactaagcagctgaagtaac 11914  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | ||  | ||||| || ||||||| ||||||||||    
T  11915 tggaacgcgatggtattttgatgtattctttgatg 11949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 5449 - 5312
Alignment:
Q  93 ataaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagta 190  Q
    |||||| ||||||||||||||| |||| |||| ||||  |||||||||||| |||  ||||||| | ||  ||||||||| ||||||| ||| || || |    
T  5449 ataaccgtgttcatattaattgctttagtaagacggtacatttttcttctgttgaagaagagagcgaagctgagttcttgcctactaaacagttgaagca 5350  T
Q  191 gttagagtgtga-tggaatcttgatgttttctttgatg 227  Q
    ||||||  |||| ||| ||||| |||||||| ||||||    
T  5349 gttagaacgtgattgggatcttaatgttttccttgatg 5312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 6877 - 6753
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||||||||  ||| ||||| ||||||||| ||| |||  |||||||||| |||||||| |  ||||||| ||| || || |||| |||     
T  6877 gttcatatcaattgttttagcaagacggtgcatttttcttttgcggaagaagagagtggaatagagttcctatctactaaacagttgaagcagttggagc 6778  T
Q  199 gtgatggaatcttgatgttttcttt 223  Q
    ||||||||||  |||||| ||||||    
T  6777 gtgatggaattctgatgtattcttt 6753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 5539 - 5667
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||||||||||  ||||||||||||  |||||| |  ||||||| ||| || || |||| |||     
T  5539 gttcatatcaattgctttagcaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctatctactaaacagttgaagcagttggagc 5638  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||| |||||  | |||||||||||||||    
T  5639 gtgacggaattcttatgttttctttgatg 5667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 53888 - 53964
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactac 175  Q
    |||||||| ||||| |||| |||| ||||| ||||||||||||||||  ||||||||| ||| ||||||||| ||||    
T  53888 gttcatatcaattgctttagtaagacggtgcatttttcttctgctgaagaagagagtgaagttgagttcttgtctac 53964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 31142 - 31189
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||| |||||||||| |||| ||||| |||||||||||||||||    
T  31142 gttcatatcaattgttttagtaagacggtgcatttttcttctgctgaa 31189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 2418 - 2546
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||| ||| |||  |||||||||||  |||||| |  ||||||| ||| || ||||||| |||     
T  2418 gttcatatcaattgctttagcaagacggtgcatttttcttttgcggaagaagagagtggagcggagttcctatctactaaacagttgaagtagttggagc 2517  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  | |||||||||||||||    
T  2518 gtgatggaattcttatgttttctttgatg 2546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 110449 - 110321
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||||||| |||  |||||||||||  |||||| |  ||||||| ||| || || |||| |||     
T  110449 gttcatatcaattgctttagcaagacggtgcatttttcttctgcagaagaagagagtggagccgagttcctatctactaaacagttgaagcagttggagc 110350  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  | |||||||||||||||    
T  110349 gtgatggaattctaatgttttctttgatg 110321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 13583 - 13717
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagt 192  Q
    |||||||||||||| ||||||||||  ||||| |||||||| ||||| |||||  | || ||||| | ||| |||||  |||||||||||||| || |      
T  13583 aaccatgttcatataaattgttttagcaagtcagtgtatttctcttccgctgaagaggaaagtggtgcagaattcttatctactaagcagctgaagcaaa 13682  T
Q  193 tagagtgtgatggaatcttgatgttttctttgatg 227  Q
    | ||  | ||||| || ||||||||||||||||||    
T  13683 tggaacgcgatggtattttgatgttttctttgatg 13717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 1058 - 969
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggag 188  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||||||||||  |||||||||||| ||||||| |  ||||||| ||| |||||    
T  1058 gttcatatcaattgctttagcaagacggtgcatttttcttctgctgaagaagagagtggagcagagttcctatctactaaacagttggag 969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 27954 - 28000
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttc 141  Q
    |||||||||||||||||||||||||  ||||| |||||||| |||||    
T  27954 aaccatgttcatattaattgttttagcaagtcagtgtatttctcttc 28000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 422 - 294
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||| ||||  ||| ||||| ||||||||||||| ||  |||||||||||| ||||||| |   ||| || ||| || || |||| |||     
T  422 gttcatatcaattgctttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagagttcctatgtacgaaacagttgaagcagttggagc 323  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  | |||||||||||||||    
T  322 gtgatggaattcttatgttttctttgatg 294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 12508 - 12374
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaaagag---agtggagtagagttcttgactactaagcagctggagtag 191  Q
    |||||||||||||||||||||||||  ||||| |||||||| || || | | ||||||   ||||| | |||||||||| |||| ||||||||| || |     
T  12508 aaccatgttcatattaattgttttagcaagtcagtgtatttctcctccg-tcaaagaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaa 12410  T
Q  192 ttagagtgtgatggaatcttgatgttttctttgatg 227  Q
     ||||  | ||||| || ||||||||||| ||||||    
T  12409 ctagaacgcgatggtattttgatgttttccttgatg 12374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 15453 - 15498
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttctt 140  Q
    ||||||||||||||||| |||||||  |||||||||||||| ||||    
T  15453 aaccatgttcatattaactgttttagcaagtcggtgtatttctctt 15498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 5314 - 5390
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactac 175  Q
    |||||||| | ||| |||| |||| ||||| ||||||||||||||||  ||||||||| ||| ||||||||| ||||    
T  5314 gttcatatcagttgctttagtaagacggtgcatttttcttctgctgaagaagagagtgaagtggagttcttgtctac 5390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 865 - 812
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtatttttcttctgctgaa 148  Q
    |||||||| || ||||||||||  | ||||||||||||||| ||||||||||||    
T  865 aaccatgtgcacattaattgttacagtaagtcggtgtatttctcttctgctgaa 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 34176 - 34048
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||| ||||  ||||  ||| ||||| ||||||||||| |||||  |||||||||||  |||||| |  ||||||| ||| || || |||| ||      
T  34176 gttcatatcaattactttagcaagacggtgcatttttcttctactgaagaagagagtggagcggagttcctatctactaaacagttgaagcagttggaac 34077  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    ||||||||||  |||||||||||||||||    
T  34076 gtgatggaattctgatgttttctttgatg 34048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 42537 - 42409
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    |||||||||||||| |||| |||| ||||| ||| ||||||| ||||  ||||  ||| ||| ||| ||||| |||| || ||| || || |||||||      
T  42537 gttcatattaattgctttagtaagccggtgcattattcttctactgaagaagaaggtgaagttgagctcttgtctacgaaacagttgaagcagttagaac 42438  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    |||||||||| || |||||||| ||||||    
T  42437 gtgatggaattttaatgttttccttgatg 42409  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 53886 - 53758
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctgaa--agagagtggagtagagttcttgactactaagcagctggagtagttagagt 198  Q
    ||||||||  |||||||||  ||| ||||| ||||||||||||| |||  ||| ||||||| ||| ||| | |||||||| ||| || || |||| |||     
T  53886 gttcatatctattgttttagcaagacggtgcatttttcttctgcggaagaagatagtggagcagaattcctaactactaaacagttgaagcagttggagc 53787  T
Q  199 gtgatggaatcttgatgttttctttgatg 227  Q
    | ||||||||  | |||||||||||||||    
T  53786 gcgatggaattcttatgttttctttgatg 53758  T

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Target: scaffold0058 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 21961 - 21885
Alignment:
Q  101 gttcatattaattgttttaataagtcggtgtatttttcttctgctga--aagagagtggagtagagttcttgactac 175  Q
    |||||||| ||||| |||| |||| ||||| ||||||||||||||||  ||||| ||| ||| ||||||||| ||||    
T  21961 gttcatatcaattgctttagtaagacggtgcatttttcttctgctgaagaagagggtgaagttgagttcttgtctac 21885  T

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Target: scaffold1985 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1985
Description:

Target: scaffold1985; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 31 - 71
Alignment:
Q  95 aaccatgttcatattaattgttttaataagtcggtgtattt 135  Q
    |||||||||||||||||||||||||  ||||| ||||||||    
T  31 aaccatgttcatattaattgttttagcaagtcagtgtattt 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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