View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4650_low_7 (Length: 238)
Name: NF4650_low_7
Description: NF4650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4650_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 9946922 - 9947119
Alignment:
| Q |
18 |
ggatttgaggggagcaaatcttacaattaattaagagtaatcacagaaatgatttggataccacatctccaccaaaaaccttaaggcattaaggtatata |
117 |
Q |
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| T |
9946922 |
ggatttgaggggagcaaatcttacaattaattaagagtaatcacaaaaatgatttggataccacatcttcaccaaaaaccttaaggcattaaggtatata |
9947021 |
T |
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| Q |
118 |
agtcctcttacttgcatattgttcataatctactttttcaaataatgtggaaacatttgacacaccaacaatctctccctctagtgcatgactctccac |
216 |
Q |
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| T |
9947022 |
agtcctc-tacttacatattgttcataatctactttttcaaataatgtggaaacatttgacacaccaacaatctctccctctaatgcatgattctccac |
9947119 |
T |
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