View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4650_low_8 (Length: 237)

Name: NF4650_low_8
Description: NF4650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4650_low_8
NF4650_low_8
[»] chr2 (47 HSPs)
chr2 (1-221)||(25549573-25549780)
chr2 (1-107)||(12864170-12864276)
chr2 (1-107)||(34356152-34356258)
chr2 (1-107)||(20612589-20612696)
chr2 (1-94)||(25540458-25540551)
chr2 (1-107)||(7747220-7747326)
chr2 (1-107)||(8410077-8410183)
chr2 (9-107)||(18902592-18902690)
chr2 (1-107)||(38005348-38005454)
chr2 (1-105)||(6358205-6358309)
chr2 (5-107)||(331447-331549)
chr2 (1-107)||(3643941-3644047)
chr2 (1-107)||(10026670-10026776)
chr2 (1-107)||(14169663-14169769)
chr2 (1-107)||(18649080-18649186)
chr2 (1-107)||(21286390-21286496)
chr2 (1-103)||(41031960-41032061)
chr2 (1-107)||(42770705-42770811)
chr2 (17-107)||(44193425-44193515)
chr2 (1-107)||(2149248-2149355)
chr2 (1-84)||(15234115-15234198)
chr2 (24-99)||(19976884-19976959)
chr2 (61-107)||(2550814-2550860)
chr2 (1-107)||(14853421-14853527)
chr2 (1-107)||(15079429-15079535)
chr2 (1-107)||(22593081-22593186)
chr2 (1-107)||(38962709-38962815)
chr2 (61-106)||(20963223-20963268)
chr2 (62-107)||(21180429-21180474)
chr2 (62-107)||(44945540-44945585)
chr2 (3-107)||(16034883-16034987)
chr2 (19-107)||(29422161-29422249)
chr2 (37-84)||(14506546-14506593)
chr2 (32-99)||(32028367-32028434)
chr2 (69-107)||(10046598-10046636)
chr2 (61-107)||(23500795-23500841)
chr2 (61-107)||(31596546-31596592)
chr2 (1-107)||(41187655-41187761)
chr2 (1-107)||(44139430-44139536)
chr2 (1-106)||(7787003-7787108)
chr2 (78-107)||(21641945-21641974)
chr2 (39-107)||(4080409-4080477)
chr2 (1-45)||(28616433-28616477)
chr2 (1-85)||(34346341-34346425)
chr2 (39-107)||(34738416-34738484)
chr2 (1-113)||(41187789-41187901)
chr2 (1-93)||(41220595-41220687)
[»] chr6 (25 HSPs)
chr6 (1-107)||(13036058-13036164)
chr6 (1-103)||(9366477-9366579)
chr6 (1-107)||(5253277-5253383)
chr6 (1-107)||(14107412-14107518)
chr6 (1-107)||(21898598-21898704)
chr6 (39-107)||(2271393-2271461)
chr6 (1-107)||(6606151-6606257)
chr6 (1-107)||(24671920-24672026)
chr6 (1-107)||(29444819-29444925)
chr6 (3-107)||(3601034-3601138)
chr6 (17-107)||(9179806-9179896)
chr6 (37-107)||(19230648-19230717)
chr6 (51-107)||(3030722-3030778)
chr6 (8-107)||(8938661-8938760)
chr6 (1-107)||(8932611-8932717)
chr6 (1-107)||(8944077-8944183)
chr6 (1-107)||(9147251-9147357)
chr6 (61-107)||(15643942-15643988)
chr6 (1-103)||(32157221-32157323)
chr6 (62-107)||(5759578-5759623)
chr6 (70-107)||(21016874-21016911)
chr6 (1-104)||(10311523-10311626)
chr6 (5-107)||(8612032-8612134)
chr6 (61-107)||(13468883-13468929)
chr6 (62-103)||(17115012-17115053)
[»] chr3 (38 HSPs)
chr3 (1-103)||(29135863-29135965)
chr3 (1-107)||(48341966-48342072)
chr3 (1-107)||(6462358-6462464)
chr3 (1-107)||(25294906-25295012)
chr3 (1-107)||(29762210-29762316)
chr3 (1-107)||(49198297-49198403)
chr3 (1-107)||(54261172-54261278)
chr3 (4-107)||(928546-928649)
chr3 (1-107)||(29127865-29127971)
chr3 (1-107)||(45877400-45877506)
chr3 (1-107)||(51683009-51683115)
chr3 (1-106)||(30767302-30767407)
chr3 (62-107)||(37092621-37092666)
chr3 (1-116)||(10855321-10855436)
chr3 (32-107)||(26923347-26923422)
chr3 (1-107)||(42412829-42412935)
chr3 (1-99)||(47749160-47749257)
chr3 (7-91)||(7612987-7613071)
chr3 (19-107)||(7650173-7650261)
chr3 (39-107)||(47471778-47471846)
chr3 (52-107)||(39849018-39849073)
chr3 (1-107)||(10040503-10040608)
chr3 (1-107)||(11687164-11687270)
chr3 (1-107)||(13893872-13893978)
chr3 (69-107)||(26207924-26207962)
chr3 (1-107)||(35315902-35316008)
chr3 (1-107)||(40944829-40944935)
chr3 (1-106)||(3136749-3136853)
chr3 (61-106)||(22405658-22405703)
chr3 (3-107)||(7328790-7328894)
chr3 (39-107)||(46529963-46530031)
chr3 (1-106)||(3507588-3507694)
chr3 (1-107)||(30045767-30045873)
chr3 (1-107)||(32873604-32873709)
chr3 (50-107)||(11025476-11025532)
chr3 (62-107)||(15320132-15320177)
chr3 (61-106)||(47303604-47303649)
chr3 (47-107)||(55069780-55069840)
[»] chr1 (52 HSPs)
chr1 (1-107)||(10422735-10422841)
chr1 (1-107)||(48798125-48798231)
chr1 (1-107)||(5855469-5855575)
chr1 (1-107)||(26660085-26660191)
chr1 (1-107)||(49078061-49078167)
chr1 (1-107)||(2980986-2981092)
chr1 (1-107)||(17642059-17642165)
chr1 (1-107)||(18915814-18915920)
chr1 (1-107)||(33418170-33418276)
chr1 (1-107)||(34697282-34697388)
chr1 (1-107)||(34877937-34878043)
chr1 (1-107)||(41663911-41664017)
chr1 (1-98)||(10336472-10336569)
chr1 (28-107)||(40288559-40288638)
chr1 (20-106)||(892371-892457)
chr1 (1-107)||(8763938-8764044)
chr1 (1-107)||(12036799-12036905)
chr1 (1-107)||(18649407-18649513)
chr1 (1-107)||(25165349-25165453)
chr1 (43-107)||(10173068-10173132)
chr1 (51-107)||(15238211-15238267)
chr1 (3-107)||(18808212-18808316)
chr1 (1-88)||(34719742-34719829)
chr1 (1-107)||(2567223-2567329)
chr1 (69-107)||(11398011-11398049)
chr1 (1-107)||(12744578-12744684)
chr1 (1-107)||(12755568-12755674)
chr1 (1-107)||(15465912-15466018)
chr1 (1-107)||(33004070-33004176)
chr1 (1-107)||(41696653-41696758)
chr1 (61-107)||(41743220-41743266)
chr1 (61-106)||(14357703-14357748)
chr1 (1-106)||(43959876-43959981)
chr1 (31-107)||(5063928-5064004)
chr1 (3-106)||(9659236-9659338)
chr1 (3-90)||(17358528-17358615)
chr1 (63-106)||(32151039-32151082)
chr1 (20-59)||(35908752-35908791)
chr1 (4-99)||(45361940-45362035)
chr1 (61-107)||(8905265-8905311)
chr1 (61-107)||(26325759-26325805)
chr1 (1-107)||(31152663-31152769)
chr1 (4-90)||(34334353-34334439)
chr1 (41-107)||(42744734-42744800)
chr1 (1-107)||(45536656-45536761)
chr1 (61-107)||(46929852-46929898)
chr1 (1-107)||(50503416-50503522)
chr1 (2-107)||(17389719-17389823)
chr1 (10-107)||(21429662-21429759)
chr1 (3-56)||(32142903-32142956)
chr1 (50-107)||(47313002-47313059)
chr1 (62-106)||(32819-32863)
[»] chr4 (41 HSPs)
chr4 (1-107)||(1446777-1446883)
chr4 (1-107)||(29895738-29895844)
chr4 (1-107)||(43458564-43458670)
chr4 (1-105)||(20421727-20421830)
chr4 (1-107)||(2559258-2559364)
chr4 (1-107)||(3574500-3574606)
chr4 (1-107)||(6779162-6779268)
chr4 (1-107)||(26480003-26480109)
chr4 (1-107)||(33647672-33647778)
chr4 (1-107)||(55920985-55921091)
chr4 (39-107)||(24166401-24166469)
chr4 (19-107)||(48317347-48317435)
chr4 (39-107)||(54524883-54524951)
chr4 (1-107)||(38075384-38075490)
chr4 (1-107)||(38165978-38166084)
chr4 (1-107)||(47078409-47078515)
chr4 (62-107)||(6032755-6032800)
chr4 (39-107)||(27531749-27531817)
chr4 (1-107)||(8888973-8889079)
chr4 (1-107)||(15732502-15732608)
chr4 (61-107)||(27248379-27248425)
chr4 (61-107)||(41162996-41163042)
chr4 (1-107)||(52950033-52950139)
chr4 (62-107)||(14567202-14567247)
chr4 (39-96)||(15840026-15840083)
chr4 (12-107)||(12703610-12703705)
chr4 (3-94)||(20128273-20128364)
chr4 (1-55)||(8064852-8064906)
chr4 (1-107)||(14123967-14124073)
chr4 (61-107)||(15829650-15829696)
chr4 (61-107)||(19651559-19651605)
chr4 (1-107)||(53599011-53599117)
chr4 (62-107)||(1940889-1940934)
chr4 (17-106)||(2686525-2686614)
chr4 (1-106)||(5472902-5473007)
chr4 (62-107)||(34667717-34667762)
chr4 (62-107)||(41339510-41339555)
chr4 (20-104)||(13552068-13552152)
chr4 (63-107)||(29588687-29588731)
chr4 (11-107)||(38841430-38841525)
chr4 (1-105)||(40272385-40272489)
[»] chr8 (29 HSPs)
chr8 (1-106)||(33401853-33401958)
chr8 (1-107)||(2467172-2467278)
chr8 (1-107)||(8141052-8141158)
chr8 (5-107)||(3418571-3418673)
chr8 (1-107)||(14666125-14666231)
chr8 (32-107)||(30903286-30903361)
chr8 (1-107)||(1013031-1013137)
chr8 (1-107)||(10927556-10927662)
chr8 (3-107)||(38922470-38922574)
chr8 (1-107)||(15884610-15884715)
chr8 (1-107)||(44893332-44893438)
chr8 (1-106)||(17981392-17981497)
chr8 (62-107)||(38235855-38235900)
chr8 (3-107)||(34710623-34710727)
chr8 (69-107)||(24837192-24837230)
chr8 (51-107)||(7673758-7673813)
chr8 (19-107)||(16893887-16893975)
chr8 (39-107)||(43027255-43027323)
chr8 (1-105)||(43032853-43032957)
chr8 (1-107)||(583764-583868)
chr8 (4-107)||(6100422-6100525)
chr8 (1-107)||(9860049-9860156)
chr8 (64-107)||(18091351-18091394)
chr8 (61-107)||(10535517-10535563)
chr8 (61-107)||(22810030-22810076)
chr8 (1-107)||(45521119-45521224)
chr8 (62-107)||(34846764-34846809)
chr8 (39-99)||(13085482-13085542)
chr8 (47-107)||(17845683-17845743)
[»] chr5 (34 HSPs)
chr5 (1-89)||(13664225-13664313)
chr5 (1-107)||(1538378-1538484)
chr5 (1-107)||(19572671-19572777)
chr5 (1-105)||(14588671-14588774)
chr5 (1-107)||(28857075-28857181)
chr5 (1-107)||(5731974-5732080)
chr5 (1-99)||(25417237-25417335)
chr5 (1-107)||(42086274-42086380)
chr5 (6-107)||(16755008-16755109)
chr5 (1-107)||(18136334-18136440)
chr5 (1-107)||(26077088-26077194)
chr5 (1-107)||(30349526-30349632)
chr5 (1-107)||(35561872-35561978)
chr5 (62-107)||(6767166-6767211)
chr5 (38-99)||(18327725-18327786)
chr5 (39-107)||(2485144-2485212)
chr5 (64-107)||(28856924-28856967)
chr5 (1-107)||(20525785-20525891)
chr5 (61-107)||(23383595-23383641)
chr5 (1-99)||(35403566-35403664)
chr5 (62-107)||(7866528-7866573)
chr5 (1-107)||(8513466-8513572)
chr5 (5-107)||(12704961-12705063)
chr5 (1-107)||(30995068-30995174)
chr5 (1-107)||(38897773-38897878)
chr5 (69-107)||(41163581-41163619)
chr5 (62-107)||(9812819-9812864)
chr5 (39-96)||(14152008-14152065)
chr5 (30-107)||(14728029-14728106)
chr5 (51-104)||(20156248-20156301)
chr5 (6-103)||(20516460-20516557)
chr5 (62-107)||(20692880-20692925)
chr5 (62-107)||(37263188-37263233)
chr5 (51-95)||(28862784-28862828)
[»] chr7 (31 HSPs)
chr7 (1-107)||(27875142-27875247)
chr7 (1-107)||(48804632-48804738)
chr7 (1-107)||(4195256-4195362)
chr7 (1-107)||(4973164-4973270)
chr7 (1-107)||(17748436-17748542)
chr7 (1-107)||(18785618-18785724)
chr7 (1-107)||(43925461-43925567)
chr7 (39-107)||(19914794-19914862)
chr7 (1-107)||(10047930-10048036)
chr7 (1-107)||(21530697-21530803)
chr7 (1-107)||(43346833-43346939)
chr7 (1-107)||(47341825-47341931)
chr7 (6-107)||(22268088-22268189)
chr7 (28-104)||(4706065-4706141)
chr7 (39-107)||(11607080-11607148)
chr7 (3-107)||(22573762-22573865)
chr7 (61-107)||(1797409-1797455)
chr7 (1-107)||(13095807-13095913)
chr7 (1-107)||(16802072-16802178)
chr7 (1-107)||(34659175-34659281)
chr7 (1-107)||(5069869-5069975)
chr7 (1-99)||(36619308-36619406)
chr7 (1-107)||(43862026-43862132)
chr7 (62-107)||(22993482-22993527)
chr7 (19-107)||(5039490-5039578)
chr7 (1-108)||(24969380-24969485)
chr7 (61-107)||(4228865-4228911)
chr7 (1-107)||(27028228-27028334)
chr7 (62-107)||(34127735-34127780)
chr7 (62-107)||(45447919-45447964)
chr7 (20-104)||(9685691-9685775)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-107)||(519-625)
scaffold0002 (1-96)||(319382-319477)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-107)||(9794-9900)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-107)||(40993-41099)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-107)||(1668-1774)
[»] scaffold0016 (1 HSPs)
scaffold0016 (61-107)||(8824-8870)
[»] scaffold0005 (2 HSPs)
scaffold0005 (62-107)||(250128-250173)
scaffold0005 (62-107)||(271189-271234)
[»] scaffold0209 (1 HSPs)
scaffold0209 (1-107)||(12524-12628)
[»] scaffold0050 (1 HSPs)
scaffold0050 (2-85)||(72604-72686)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-107)||(26132-26238)
[»] scaffold0006 (1 HSPs)
scaffold0006 (62-107)||(68466-68511)
[»] scaffold0009 (1 HSPs)
scaffold0009 (39-107)||(9385-9453)


Alignment Details
Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 25549780 - 25549573
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||||| ||| |||| ||  |||||| ||||||| ||||||||||| ||||||||  ||||||| |||||||||||||||||||||||     
T  25549780 agaggcatgtgcactagccaaatgttgttttccctaagaatcgaacccagtattccccaaatacgtacttggaaggagctccttgccactggagcccaa- 25549682  T
Q  101 caacttgctcaaaagacttttgtttagtcactaacttaaactattgatacatgcatatgtcaccttcaagaatgtaacaaaacaaggagaagataaaaaa 200  Q
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25549681 ------------aagacttttgtttagtcactaacttaaactattgatacatgcatatgtcaccttcaagaatgtaacaaaacaaggagaagataaaaaa 25549594  T
Q  201 gacacacatttatgaaagggg 221  Q
    |||||||||||||||||||||    
T  25549593 gacacacatttatgaaagggg 25549573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12864276 - 12864170
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||||||   |||||||| ||||||||  ||||||||||| ||||||||  |||||||||||||||| ||||||||| |||||||||||||     
T  12864276 agaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatccggtattccccgaatacgtcattggaaggagctccttgtcactggagcccaaa 12864177  T
Q  101 caacttg 107  Q
    |||||||    
T  12864176 caacttg 12864170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34356258 - 34356152
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||||||   |||||||| ||||||||  |||||||| || |||||||| | ||||||| ||||||  |||||||||||||||||||||||     
T  34356258 agaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatagctccttgccactggagcccaaa 34356159  T
Q  101 caacttg 107  Q
    |||||||    
T  34356158 caacttg 34356152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20612589 - 20612696
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccc-cctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    ||||||||||||||| | |||||||| ||||| ||| | ||||||| || ||||||||  |||||  | ||||||| |||||||||||||||||||||||    
T  20612589 agaggcatgcgcactggccaagtgttgttccctcctgagaatcgaacccggtattccccgaatacaaccttggaaggagctccttgccactggagcccaa 20612688  T
Q  100 gcaacttg 107  Q
    ||||||||    
T  20612689 gcaacttg 20612696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25540458 - 25540551
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggag 94  Q
    ||||||||||||||| | |||| ||| |||||||||  ||||||| ||||||||||| | ||||||| ||||||  ||||||||||||||||||    
T  25540458 agaggcatgcgcactggccaagcgttgttccccctaggaatcgaacccagtattccccagatacgtccttggaatgagctccttgccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7747326 - 7747220
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||| | |||  ||| |||| ||||  ||||||| || ||||||||   ||||||| ||||||| ||||||||||||||||||||||||    
T  7747326 agaggcatgcacactggccaaacgttgttcctcctaggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaag 7747227  T
Q  101 caacttg 107  Q
    |||||||    
T  7747226 caacttg 7747220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8410183 - 8410077
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   ||||||| ||  ||||| |    |||||| ||||||| ||||||||||||||||||||||||    
T  8410183 agaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactggagcccaag 8410084  T
Q  101 caacttg 107  Q
    |||||||    
T  8410083 caacttg 8410077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 18902592 - 18902690
Alignment:
Q  9 gcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| |||||| ||| |||||| |   ||||||| || ||||||||  | |||||| ||||||| |||||||||||||||||||||||||||||||    
T  18902592 gcgcactggtcaagcgttgttccccgtgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttg 18902690  T

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Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 38005454 - 38005348
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||||| |   ||||||| |||||||||||    |||||| ||||||| |||||||||||||||||||||||     
T  38005454 agaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaa 38005355  T
Q  101 caacttg 107  Q
    |||||||    
T  38005354 caacttg 38005348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 6358205 - 6358309
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||  ||||||||||  ||||||||   ||||||| || |||  |||| ||||||||||||||||||     
T  6358205 agaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccggatacgtcctttgaatgagcttcttgccactggagcccaaa 6358304  T
Q  101 caact 105  Q
    |||||    
T  6358305 caact 6358309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 331549 - 331447
Alignment:
Q  5 gcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaac 104  Q
    ||||||||||| | |||||||| ||||||||   ||||||| || ||||||||    |||||| ||||||  ||||| ||||||||||||||||||||||    
T  331549 gcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaagagctcattgccactggagcccaagcaac 331450  T
Q  105 ttg 107  Q
    |||    
T  331449 ttg 331447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3643941 - 3644047
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||| | || ||||| || || ||||||||   ||||||| ||||||  |||||||| |||||||||||||||    
T  3643941 agaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtattccccggatacgtccttggaatgagctcctttccactggagcccaag 3644040  T
Q  101 caacttg 107  Q
    |||||||    
T  3644041 caacttg 3644047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10026670 - 10026776
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||  ||| |||||||| | ||||||| || |||||  |  | |||||| ||||||| |||||||||||| |||||||||||    
T  10026670 agaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtattttccgagtacgtccttggaaggagctccttgccattggagcccaag 10026769  T
Q  101 caacttg 107  Q
    |||||||    
T  10026770 caacttg 10026776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14169663 - 14169769
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||| |||||||||| |||||||||| |||||||  | ||||||| ||  |||||||  |||||||| ||||||  | ||||||| |||||||||||||     
T  14169663 agagacatgcgcactggtcaagtgttgttcccccggagaatcgaacccgatattccccgaatacgtccttggaaagatctccttgtcactggagcccaaa 14169762  T
Q  101 caacttg 107  Q
    |||||||    
T  14169763 caacttg 14169769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18649080 - 18649186
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||||||   ||| | || |||| ||| | |||||||||| ||||||||| ||| | || ||||||| |||| ||||||||||||||||||     
T  18649080 agaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtattccctgaatgcatccttggaagcagcttcttgccactggagcccaaa 18649179  T
Q  101 caacttg 107  Q
    |||||||    
T  18649180 caacttg 18649186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21286496 - 21286390
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||||| ||| || | |||   ||||||| || ||||||||   ||||||| ||||||| ||||||||||||||||||| |||     
T  21286496 agaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagctcaaa 21286397  T
Q  101 caacttg 107  Q
    |||||||    
T  21286396 caacttg 21286390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41031960 - 41032061
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||| | |||||||| ||||||||   ||||||| || || ||||||   |||||| ||||||| ||||||||||||||||||||||||    
T  41031960 agaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtgttccctgg-tacgtccttggaaggagctccttgccactggagcccaag 41032058  T
Q  101 caa 103  Q
    |||    
T  41032059 caa 41032061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 42770705 - 42770811
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||||||| | ||| ||| || ||||| |    ||||||| ||||||| ||||| ||||||||||||||||||    
T  42770705 agaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgtccttggaaggagctctttgccactggagcccaag 42770804  T
Q  101 caacttg 107  Q
    |||||||    
T  42770805 caacttg 42770811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 44193515 - 44193425
Alignment:
Q  17 gtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||| |||||||||||||||||| |  |||||||    ||||||||||||||  ||||| |||||||||||| ||||||||||||    
T  44193515 gtcaagcgttgttccccctaaaaatcgaacctggtattcctcggatacgtcattggaaagagctcattgccactggagtccaagcaacttg 44193425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2149248 - 2149355
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaa-tccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    ||||||||||||||| | |||  |||||||||||    ||||||| ||| |||||||| | |||| || ||| |||||| ||||||||||||||||||||    
T  2149248 agaggcatgcgcactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatccttgaaagaagttccttgccactggagcccaa 2149347  T
Q  100 gcaacttg 107  Q
     |||||||    
T  2149348 acaacttg 2149355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15234115 - 15234198
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctcctt 84  Q
    ||||||||||||||| |||||||||| |||||||| | ||||||| | |||||||||    |||||| ||||||| ||||||||    
T  15234115 agaggcatgcgcactggtcaagtgttgttccccctgagaatcgaacctagtattccccgggtacgtccttggaaggagctcctt 15234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 19976884 - 19976959
Alignment:
Q  24 gttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    |||||||||||| ||||||||| || ||||||||   ||||||| ||||||  |||| ||||||||||||||||||    
T  19976884 gttattccccctgaaaatcgaacccggtattccccggatacgtccttggaaagagctacttgccactggagcccaa 19976959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 2550860 - 2550814
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  2550860 atacgtccttgtaaggagctccttgccactggagcccaagcaacttg 2550814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14853421 - 14853527
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||| |||||| | |||  ||| |||||||| |||||||||||  ||||||||   |||| || ||| ||| || ||||||||||||||||||||     
T  14853421 agaggcatacgcactggccaaaagttgttccccctgaaaatcgaatctggtattccccggatacatccttgaaaggagttccttgccactggagcccaaa 14853520  T
Q  101 caacttg 107  Q
    |||||||    
T  14853521 caacttg 14853527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15079535 - 15079429
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||| ||||| |||| |||||| ||| ||||||||  |||||||| || ||||||||    |||||| |||||||  | |||||||||| ||||||||||    
T  15079535 agagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggtgttccttgccaccggagcccaag 15079436  T
Q  101 caacttg 107  Q
    |||||||    
T  15079435 caacttg 15079429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22593186 - 22593081
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||  ||| ||||||||   |||||||  ||||||||||    |||||| ||||||| ||||||||||||||||||| ||||    
T  22593186 agaggcatgcgcactggccaac-gttgttccccctgggaatcgaactcagtattccccgggtacgtccttggaaggagctccttgccactggagcacaag 22593088  T
Q  101 caacttg 107  Q
    |||||||    
T  22593087 caacttg 22593081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 38962815 - 38962709
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||| ||| ||||||||| || ||||||||   ||||||| ||| ||  |||||||| ||||||||| ||||     
T  38962815 agaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattccccggatacgtccttgaaatgagctccttaccactggagtccaaa 38962716  T
Q  101 caacttg 107  Q
    |||||||    
T  38962715 caacttg 38962709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 20963223 - 20963268
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaactt 106  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||    
T  20963223 atacgtcattggaaggaggtccttgccactggagcccaaacaactt 20963268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 21180429 - 21180474
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||    
T  21180429 tacgtccttggaaggagctccttgccactggagcccaaacaacttg 21180474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 44945585 - 44945540
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||    
T  44945585 tacgtccttggaaggagctccttgccacttgagcccaagcaacttg 44945540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 16034987 - 16034883
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagca 102  Q
    |||||||| |||| |||||| ||| |||| ||| ||||||||| || |||||||    ||||||| ||||||| || ||||| |||||| || |||||||    
T  16034987 aggcatgcacactggtcaagcgttgttccgcctgaaaatcgaacccggtattcctcggatacgtccttggaaggagttccttaccactgaagtccaagca 16034888  T
Q  103 acttg 107  Q
    |||||    
T  16034887 acttg 16034883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 29422249 - 29422161
Alignment:
Q  19 caagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||| ||||| ||  |||||||| |||||||||||    |||||| ||| ||| |||||||||| |||||||||||| |||||||    
T  29422249 caagtgttgttccctctggaaatcgaacccagtattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaacttg 29422161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 14506546 - 14506593
Alignment:
Q  37 aaaatcgaatccagtattccctaaatacgtcattggaagaagctcctt 84  Q
    ||||||||| |||||||||| | |||||||| ||||||||||||||||    
T  14506546 aaaatcgaacccagtattccttcaatacgtctttggaagaagctcctt 14506593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 32028434 - 32028367
Alignment:
Q  32 ccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    |||| |||||||||| |  |||| || ||||||||| ||||||| |||||||||||||| ||||||||    
T  32028434 ccctgaaaatcgaattcgatatttcccaaatacgtccttggaagcagctccttgccactagagcccaa 32028367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 10046598 - 10046636
Alignment:
Q  69 ttggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  10046598 ttggaaggagctccttgccattggagcccaagcaacttg 10046636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 23500795 - 23500841
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| ||||||||||||| ||||||||| |||||||    
T  23500795 atacgtctttggaaggagctccttgccaccggagcccaaacaacttg 23500841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 31596546 - 31596592
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||    
T  31596546 atacgtctttggaaggagctccttgccactggaatccaagcaacttg 31596592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41187761 - 41187655
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||  |||| |||||||||| |||||||| | ||||||| || ||||||   | ||||||| || |||| |||||||||| ||| | || ||||    
T  41187761 agaggcatggacactggtcaagtgttgttccccctcataatcgaacccggtattcttcagatacgtccttagaaggagctccttgctacttgcgcgcaag 41187662  T
Q  101 caacttg 107  Q
    |||||||    
T  41187661 caacttg 41187655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44139536 - 44139430
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||| ||||||| | |||| ||| ||||||||   ||||||| || |||||||| | || | || ||||||| || ||||  |||||||||||||||    
T  44139536 agaggcacgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccagatgcatccttggaaggagttcctcaccactggagcccaag 44139437  T
Q  101 caacttg 107  Q
    |||||||    
T  44139436 caacttg 44139430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7787108 - 7787003
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||| ||| | ||||| || ||||||||  |||||||| || ||||||||    |||||| | | ||| || ||||||||||||||||||||     
T  7787108 agaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtattccccgggtacgtcctagaaaggagttccttgccactggagcccaac 7787009  T
Q  101 caactt 106  Q
    ||||||    
T  7787008 caactt 7787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 107
Target Start/End: Complemental strand, 21641974 - 21641945
Alignment:
Q  78 gctccttgccactggagcccaagcaacttg 107  Q
    ||||||||||||||||||||||||||||||    
T  21641974 gctccttgccactggagcccaagcaacttg 21641945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 4080409 - 4080477
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||||||||||| ||   ||||||||||||||| |||| || | |||||||| |||| |||||||    
T  4080409 aatcgaatccagtatttcccggatacgtcattggaaggagcttctcgtcactggagtccaaacaacttg 4080477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28616433 - 28616477
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaa 45  Q
    |||||||||||||||   ||||||||||||||||| |||||||||    
T  28616433 agaggcatgcgcactgcccaagtgttattccccctgaaaatcgaa 28616477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 34346341 - 34346425
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttg 85  Q
    |||||||||| |||| | |||||||| |||||||| | |||| || ||||||||||| |  |||||| ||||||  |||||||||    
T  34346341 agaggcatgcacactggccaagtgttgttccccctgataatcaaacccagtattccccaggtacgtccttggaatgagctccttg 34346425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 34738416 - 34738484
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||||||||||||||    ||||||| ||||||| | ||||| ||||||||||| |||| ||||||    
T  34738416 aatcgaatccagtattcctcggatacgtccttggaaggaactcctcgccactggagctcaagtaacttg 34738484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41187901 - 41187789
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||||| ||| ||   ||||| ||| |||| | |||||||    ||||||| ||||||| ||||||||||||| | ||||||      
T  41187901 agaggcatgcgcactggtcaagcgttgtttttcctaagaattgaattcggtattcctcggatacgtccttggaaggagctccttgccaccgaagcccaga 41187802  T
Q  101 caacttgctcaaa 113  Q
    ||||||| |||||    
T  41187801 caacttggtcaaa 41187789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41220687 - 41220595
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactgga 93  Q
    ||||||||||||||| | |||| ||| |||| |||   ||||||| || ||||||||    |||||| ||||||| |||||||||||||||||    
T  41220687 agaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 41220595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 13036058 - 13036164
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| |||||||| ||||||||| ||  |||||||  |||||||| ||||||| ||||||||||||||||||||||||    
T  13036058 agaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccgatattccccgaatacgtccttggaaggagctccttgccactggagcccaag 13036157  T
Q  101 caacttg 107  Q
    |||||||    
T  13036158 caacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9366477 - 9366579
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| |||||||||||||||||||||| |   ||||||| || ||| || ||||||| ||||||||| ||||||||||||||    
T  9366477 agaggcatgcgcactggccaagcgttattccccctaaaaatcgaacctgatattccccaagtacatccttggaaggagctccttgtcactggagcccaag 9366576  T
Q  101 caa 103  Q
    |||    
T  9366577 caa 9366579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5253277 - 5253383
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   ||||||| || ||||||||    |||||| ||||||| |||||||||||| |||||||||||    
T  5253277 agaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccattggagcccaag 5253376  T
Q  101 caacttg 107  Q
    |||||||    
T  5253377 caacttg 5253383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14107412 - 14107518
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| |||||| ||| |||| |||   ||||||| || ||||||||  |||||||| ||||||| |||||||||||||||||||||||     
T  14107412 agaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaa 14107511  T
Q  101 caacttg 107  Q
    |||||||    
T  14107512 caacttg 14107518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21898704 - 21898598
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||| |||   ||||||| || ||||||||   ||||||| ||||||| ||||||||||||||||||||||||    
T  21898704 agaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaag 21898605  T
Q  101 caacttg 107  Q
    |||||||    
T  21898604 caacttg 21898598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 2271393 - 2271461
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| || ||||||||  |||||||| ||||||| |||||||||||||||||||||||||||||||    
T  2271393 aatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttg 2271461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6606151 - 6606257
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||  |||| | |||||||| |||||||| | ||||||| || ||||||||   ||||||| ||||||| |||||||||||||||  |||||||    
T  6606151 agaggcatgtacactggccaagtgttgttccccctgagaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgtggcccaag 6606250  T
Q  101 caacttg 107  Q
    |||||||    
T  6606251 caacttg 6606257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 24671920 - 24672026
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||| |||||||||| ||||| ||   ||| ||| || |||||| | | ||||||| ||| ||| ||||||||||||||||||||||||    
T  24671920 agaggcatgcacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgtccttgaaaggagctccttgccactggagcccaag 24672019  T
Q  101 caacttg 107  Q
    |||||||    
T  24672020 caacttg 24672026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 29444819 - 29444925
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| ||||||||| |||||||| || |||| |||    |||||| ||||||| |||||||||||||| |||||||||    
T  29444819 agaggcatgcgcactggccaagcgttgttccccctagaaatcgaacccggtatcccccgggtacgtctttggaaggagctccttgccactagagcccaag 29444918  T
Q  101 caacttg 107  Q
     ||||||    
T  29444919 taacttg 29444925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 3601138 - 3601034
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagca 102  Q
    ||||||||||||| | |||| ||| |||||||| | ||||||| || ||||||||  |||||||  ||||||  ||||| |||||||| |||||||||||    
T  3601138 aggcatgcgcactggccaagcgttgttccccctgagaatcgaaaccggtattccccgaatacgtatttggaaagagctctttgccactagagcccaagca 3601039  T
Q  103 acttg 107  Q
    |||||    
T  3601038 acttg 3601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 9179806 - 9179896
Alignment:
Q  17 gtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||||| ||||||||   ||||||| || |||||||||   |||||| ||||||  ||||||||||||||||||||||| |||||||    
T  9179806 gtcaagtgttgttccccctgggaatcgaacccggtattccctgggtacgtccttggaatgagctccttgccactggagcccaaacaacttg 9179896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 19230648 - 19230717
Alignment:
Q  37 aaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||||||| |||||||| |  |||||| ||||||| ||||||||||||||||||||||| |||||||    
T  19230648 aaaatcgaatccggtattcccgag-tacgtccttggaaggagctccttgccactggagcccaaacaacttg 19230717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 3030722 - 3030778
Alignment:
Q  51 tattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||||| ||||||  ||||||||||||||||||||||| |||||||    
T  3030722 tattcccgaaatacgtccttggaatgagctccttgccactggagcccaaacaacttg 3030778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 8938760 - 8938661
Alignment:
Q  8 tgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||| |||||||||| |||| |||   ||||||| | |||||||||   ||| ||| ||||||| ||||||||| ||||||||||||| |||||||    
T  8938760 tgcgcactggtcaagtgttgttcctcctgggaatcgaaccaagtattccccggatatgtctttggaaggagctccttgtcactggagcccaaacaacttg 8938661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8932717 - 8932611
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||||| |||||||| ||||||||   ||||||| ||  |||||||   |||| || ||||||| | ||||||||||||||||  |||     
T  8932717 agaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccggatacatccttggaaggaactccttgccactggagttcaaa 8932618  T
Q  101 caacttg 107  Q
    |||||||    
T  8932617 caacttg 8932611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8944183 - 8944077
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||||| |||||||| ||||||||   ||||||| ||  |||||||   |||| || ||||||| | ||||||||||||||||  |||     
T  8944183 agaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccggatacatccttggaaggaactccttgccactggagttcaaa 8944084  T
Q  101 caacttg 107  Q
    |||||||    
T  8944083 caacttg 8944077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9147357 - 9147251
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| |||||||||  ||||||||   ||||||| ||  ||||||| |  |||||| ||||||  |||||||| ||||||||||||||     
T  9147357 agaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgagctccttcccactggagcccaaa 9147258  T
Q  101 caacttg 107  Q
    |||||||    
T  9147257 caacttg 9147251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 15643942 - 15643988
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||||    
T  15643942 atacgtccttggaatgagctccttgccactggagcccaagcaacttg 15643988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32157221 - 32157323
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||| ||||||||| |||||||||| ||||| ||||||||  || |   ||||||||||||| ||| || |||| ||||||||  || |||||||||||    
T  32157221 agaggtatgcgcactggtcaagtgttgttccctctaaaaattaaacctgatattccctaaatatgtccttagaaggagctccttatcagtggagcccaag 32157320  T
Q  101 caa 103  Q
    |||    
T  32157321 caa 32157323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 5759623 - 5759578
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| || ||||||||||||||||||||||||||||    
T  5759623 tacgtccttggaaggagttccttgccactggagcccaagcaacttg 5759578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 21016874 - 21016911
Alignment:
Q  70 tggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| |||||||||||||||||||||||||||||||    
T  21016874 tggaaggagctccttgccactggagcccaagcaacttg 21016911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10311523 - 10311626
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||| |||||||||| | |||| ||| |||||| | |  |||||| || ||||||||   ||||||  ||||||| |||||||||| |||||||||||||    
T  10311523 agagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacgttcttggaaggagctccttgctactggagcccaag 10311622  T
Q  101 caac 104  Q
    ||||    
T  10311623 caac 10311626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 8612032 - 8612134
Alignment:
Q  5 gcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaac 104  Q
    |||||| |||| |||||| ||| |||| |||   ||||||| || ||||||||    |||||| ||||||| |||||||||||||||||| |||| ||||    
T  8612032 gcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaac 8612131  T
Q  105 ttg 107  Q
    |||    
T  8612132 ttg 8612134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 13468929 - 13468883
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| |||||||||||||  ||||||||||||||||    
T  13468929 atacgtccttggaaggagctccttgccaccagagcccaagcaacttg 13468883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 17115012 - 17115053
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaa 103  Q
    |||||| ||||||| |||| ||||||||||||||||||||||    
T  17115012 tacgtccttggaaggagcttcttgccactggagcccaagcaa 17115053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29135965 - 29135863
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   |||||||||| ||||||||   ||||||| ||||||||||||||||||||||||||||||||    
T  29135965 agaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccggatacgtccttggaagaagctccttgccactggagcccaag 29135866  T
Q  101 caa 103  Q
    |||    
T  29135865 caa 29135863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 48342072 - 48341966
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||||| |||| ||| |||||||||  ||| ||| || |||||||| |  |||||| ||||||| |||||||||||||||||||||||     
T  48342072 agaggcatgcgcactagccaagcgttgttccccctaggaatagaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaa 48341973  T
Q  101 caacttg 107  Q
    |||||||    
T  48341972 caacttg 48341966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6462464 - 6462358
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| ||| ||||   ||||||| || |||||||| | ||||||| ||||||| |||||||||||||| |||||||||    
T  6462464 agaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgtccttggaaggagctccttgccactagagcccaag 6462365  T
Q  101 caacttg 107  Q
    |||||||    
T  6462364 caacttg 6462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25295012 - 25294906
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| || ||||  | |||| || || ||||||||   ||||||| ||||||| ||||||||||||||||||||||||    
T  25295012 agaggcatgcgcactggccaagtgttgtttccccagagaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaag 25294913  T
Q  101 caacttg 107  Q
    |||||||    
T  25294912 caacttg 25294906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 29762210 - 29762316
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| || ||||| | ||||| | ||  |||||||  ||||| || ||||||| ||||||||||||||||||||||||    
T  29762210 agaggcatgcgcactggccaagtgttgttgcccctgagaatcggacccgatattccccgaatacatccttggaaggagctccttgccactggagcccaag 29762309  T
Q  101 caacttg 107  Q
    |||||||    
T  29762310 caacttg 29762316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 49198403 - 49198297
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| |||||||||  ||||||| || ||||||||   ||| ||| ||||||||| ||||||| |||||||||||||     
T  49198403 agaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccggatatgtccttggaagaaactccttgtcactggagcccaaa 49198304  T
Q  101 caacttg 107  Q
    |||||||    
T  49198303 caacttg 49198297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 54261278 - 54261172
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||| ||||  ||||||| || |||||||| |  |||||| ||||||| |||||||||||||||||||||||     
T  54261278 agaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaa 54261179  T
Q  101 caacttg 107  Q
    |||||||    
T  54261178 caacttg 54261172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 928649 - 928546
Alignment:
Q  4 ggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaa 103  Q
    |||||||||||| |||||||||| |||||||| | |||||||||  ||||||||||  |||||| ||||||  |||||||||||| | ||||| || |||    
T  928649 ggcatgcgcactggtcaagtgttgttccccctgagaatcgaatctggtattccctaggtacgtccttggaatgagctccttgccagttgagcctaaacaa 928550  T
Q  104 cttg 107  Q
    ||||    
T  928549 cttg 928546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29127971 - 29127865
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||||||   |||||||| ||| ||||  |||||||| ||  ||||||| | ||||||| ||||||| | |||||||||||||||||||||     
T  29127971 agaggcatgcgcactgaccaagtgttgttctccctggaaatcgaacccgatattccccagatacgtccttggaaggatctccttgccactggagcccaaa 29127872  T
Q  101 caacttg 107  Q
    |||||||    
T  29127871 caacttg 29127865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 45877506 - 45877400
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| | |||||||| || |||||  |||||||| || ||||||||   ||||||| |||||||  ||||||||||||||||||||||     
T  45877506 agaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtccttggaaggggctccttgccactggagcccaaa 45877407  T
Q  101 caacttg 107  Q
    |||||||    
T  45877406 caacttg 45877400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 51683009 - 51683115
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||||| ||| ||||||||   ||||||| |  ||||||||   ||||||| ||||||| ||||||| |||||||||||||||     
T  51683009 agaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattccccggatacgtctttggaaggagctcctcgccactggagcccaaa 51683108  T
Q  101 caacttg 107  Q
    |||||||    
T  51683109 caacttg 51683115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 30767302 - 30767407
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||| | |||||||| ||||||||  |||||||| ||  ||||||| |  ||| || ||||||| | ||||||||||||||||||||||    
T  30767302 agaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatattccccaggtacatccttggaaggaactccttgccactggagcccaag 30767401  T
Q  101 caactt 106  Q
    ||||||    
T  30767402 caactt 30767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 37092621 - 37092666
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  37092621 tacgtccttggaagaagctccttgccactggagcccaagcaacttg 37092666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10855436 - 10855321
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||| ||| | |||| ||| ||||||||  ||||| || || ||||| || || ||| || ||||||| |||||||||||||||||||||||     
T  10855436 agaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaaggagctccttgccactggagcccaaa 10855337  T
Q  101 caacttgctcaaaaga 116  Q
    ||||||| | ||||||    
T  10855336 caacttggttaaaaga 10855321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 26923347 - 26923422
Alignment:
Q  32 ccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||||||||||||  |||||| |||||||||||||| ||| |||||||||| || ||||||||  |||||||    
T  26923347 ccctaaaaatcgaatccgatattccttaaatacgtcattgaaaggagctccttgctaccggagcccagacaacttg 26923422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 42412829 - 42412935
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| | |||| ||| |||||||    ||||||| || ||||||||   ||||||| ||||||| |||||||||||| |||||||||||    
T  42412829 agaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccattggagcccaag 42412928  T
Q  101 caacttg 107  Q
    |||||||    
T  42412929 caacttg 42412935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 47749160 - 47749257
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    ||||||||||||||| | |||| ||| |||||| ||  ||||||| || |||||||||  ||||||| ||||||||||||| || ||||||||||||||    
T  47749160 agaggcatgcgcactggccaagagttgttcccc-taggaatcgaacccggtattccctggatacgtccttggaagaagctcattaccactggagcccaa 47749257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 7612987 - 7613071
Alignment:
Q  7 atgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactg 91  Q
    ||||||||||| |||| ||| ||||||||   ||||||| || |||||||| || |||||| ||||||| |||||||||||||||    
T  7612987 atgcgcactagccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactg 7613071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 7650261 - 7650173
Alignment:
Q  19 caagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||| ||||||||  |||||||| || ||||||||||| ||| || ||| ||| | ||||||||||||||| ||||| |||||||    
T  7650261 caagtgttgttccccctggaaatcgaacccggtattccctaagtacatccttgaaaggaactccttgccactggaacccaaacaacttg 7650173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 47471846 - 47471778
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| || ||||||||||  |||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  47471846 aatcgaacccggtattccctaggtacgtccttggaaggagctctttgccactagagcccaagcaacttg 47471778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 39849073 - 39849018
Alignment:
Q  52 attccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| | |||||| ||||||| ||||||||||||||||||||||||| |||||    
T  39849073 attccctgagtacgtccttggaaggagctccttgccactggagcccaagcgacttg 39849018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10040608 - 10040503
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||||| | | ||||||| ||  |||||||    |||||| || |||| ||||||||||||||||||||||||    
T  10040608 agaggcatgcgcactggccaagcgttgttcccc-tgagaatcgaacccgatattccccgggtacgtccttagaaggagctccttgccactggagcccaag 10040510  T
Q  101 caacttg 107  Q
    |||||||    
T  10040509 caacttg 10040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11687164 - 11687270
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | ||||  || |||||||| | |||| || || |||||| | |  |||||| ||||||| |||| ||||||||||||||||||     
T  11687164 agaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactggagcccaaa 11687263  T
Q  101 caacttg 107  Q
    |||||||    
T  11687264 caacttg 11687270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 13893978 - 13893872
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||| |   |||| ||| ||||||||  ||||| || || ||||||||   | ||||| ||||||| |||||||||||||||||||||||     
T  13893978 agaggcatgcgcattgaccaagcgttgttccccctggaaatccaacccggtattccccggacacgtccttggaaggagctccttgccactggagcccaaa 13893879  T
Q  101 caacttg 107  Q
    |||||||    
T  13893878 caacttg 13893872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 26207924 - 26207962
Alignment:
Q  69 ttggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  26207924 ttggaaggagctccttgccactggagcccaagcaacttg 26207962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 35316008 - 35315902
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   ||||||| ||  ||||| |    |||||| ||||||| ||||| |||||||||||||||||     
T  35316008 agaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctctttgccactggagcccaaa 35315909  T
Q  101 caacttg 107  Q
    |||||||    
T  35315908 caacttg 35315902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40944935 - 40944829
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||  ||| || ||||||| ||||||||   |||||||  | |||||| ||  ||||||| ||||||| |||| |||||||| ||||||||||    
T  40944935 agaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattctctggatacgtccttggaaggagcttcttgccaccggagcccaag 40944836  T
Q  101 caacttg 107  Q
    |||||||    
T  40944835 caacttg 40944829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3136749 - 3136853
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||||||   |||||||| |||||| | |||||||||||| ||||||||    |||||| ||| ||| |||| |||||||| |||||||||     
T  3136749 agaggcatgcgcactgcccaagtgttgttcccc-tgaaaatcgaatccggtattccccgggtacgtccttgaaaggagcttcttgccacgggagcccaaa 3136847  T
Q  101 caactt 106  Q
    ||||||    
T  3136848 caactt 3136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 22405658 - 22405703
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaactt 106  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||    
T  22405658 atacgtcattggtaggagctccttgccactggagcccaaacaactt 22405703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 7328894 - 7328790
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagca 102  Q
    ||||||||||||| | |||||||| ||||||||   ||||||| || ||||| ||    |||||| ||||||| | |||||||||||| |||| ||||||    
T  7328894 aggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatttcccgggtacgtccttggaaggaactccttgccactagagcacaagca 7328795  T
Q  103 acttg 107  Q
    |||||    
T  7328794 acttg 7328790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 46529963 - 46530031
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| || |||||||| |  |||||| ||| ||| ||||||||||||||||||||||| |||||||    
T  46529963 aatcgaacccggtattccccaggtacgtccttgaaaggagctccttgccactggagcccaaacaacttg 46530031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3507588 - 3507694
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattg-gaagaagctccttgccactggagcccaa 99  Q
    ||||||||||||||| | |||||||| ||||| |||  |||| || || |||||||||   |||||| ||  |||| |||||||||||||| ||| ||||    
T  3507588 agaggcatgcgcactggccaagtgttgttccctctaggaatcaaacccggtattccctgtgtacgtccttttgaaggagctccttgccactagagtccaa 3507687  T
Q  100 gcaactt 106  Q
    |||||||    
T  3507688 gcaactt 3507694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30045873 - 30045767
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||| |||||||||| | |||| ||| |||||||||  ||||||| || |||||||| |  |||||  ||  ||| ||||| |||||||| |||||||||    
T  30045873 agagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtattccccatgtacgttcttaaaaggagctcattgccacttgagcccaag 30045774  T
Q  101 caacttg 107  Q
    |||||||    
T  30045773 caacttg 30045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 32873604 - 32873709
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| |||||| ||| ||| |||||  ||||||| |  ||||||||    |||||| ||||||  |||||||||||||||||||||||     
T  32873604 agaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattcccggg-tacgtccttggaatgagctccttgccactggagcccaaa 32873702  T
Q  101 caacttg 107  Q
    |||||||    
T  32873703 caacttg 32873709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 11025476 - 11025532
Alignment:
Q  50 gtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||| | ||||||| |||||||  ||||||| ||||||||||||||||||||||    
T  11025476 gtattccccagatacgtccttggaagg-gctccttaccactggagcccaagcaacttg 11025532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 15320177 - 15320132
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||||||| |||| |||||||    
T  15320177 tacgtccttggaaggagctccttgccactggagtccaaacaacttg 15320132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 47303604 - 47303649
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaactt 106  Q
    ||||||| |||||| ||||||||| |||| ||||||||||||||||    
T  47303604 atacgtccttggaaaaagctccttaccaccggagcccaagcaactt 47303649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 55069780 - 55069840
Alignment:
Q  47 ccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||||||| |||||||| ||| ||  ||||| ||| ||||||||||||| |||||||    
T  55069780 ccagtattccctgaatacgtccttgaaaagagctcattgtcactggagcccaaacaacttg 55069840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10422841 - 10422735
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| |||| |||| |||||||| || ||||||||  |||||||||||||||| ||||||||||||||| |||||||     
T  10422841 agaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccgaatacgtcattggaaggagctccttgccactgtagcccaaa 10422742  T
Q  101 caacttg 107  Q
    |||||||    
T  10422741 caacttg 10422735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 48798125 - 48798231
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||||||||||||| ||| ||||||||  |||||||| ||  |||||||   ||||||||||||||| ||||||||||||||||||||| |     
T  48798125 agaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagctccttgccactggagccccaa 48798224  T
Q  101 caacttg 107  Q
    |||||||    
T  48798225 caacttg 48798231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5855575 - 5855469
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||| |||   ||||||| || ||||||||  |||||||| ||||||| |||||||||||||||||||||||     
T  5855575 agaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaaa 5855476  T
Q  101 caacttg 107  Q
    |||||||    
T  5855475 caacttg 5855469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26660191 - 26660085
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||| |||  |||| |||| |||||| |  |||||||| || ||||||||  ||||||||||| |||||| ||| ||||||||||||||||||    
T  26660191 agaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtattccccgaatacgtcattcgaagaaactctttgccactggagcccaag 26660092  T
Q  101 caacttg 107  Q
    |||||||    
T  26660091 caacttg 26660085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 49078167 - 49078061
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| || |||||   ||||||| || ||||||||   ||||||| || |||| ||||||||||||||||||||||||    
T  49078167 agaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaag 49078068  T
Q  101 caacttg 107  Q
    |||||||    
T  49078067 caacttg 49078061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2980986 - 2981092
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||| | |||||||| ||||| ||   ||||||| |||||||||||   |||||||  |||||| |||||||||||||| |||||||||    
T  2980986 agaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagctccttgccactagagcccaag 2981085  T
Q  101 caacttg 107  Q
    |||||||    
T  2981086 caacttg 2981092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 17642059 - 17642165
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   ||||||| |||||||| |||   ||||||  |||||| ||||||||| |||||||||||||     
T  17642059 agaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaa 17642158  T
Q  101 caacttg 107  Q
    |||||||    
T  17642159 caacttg 17642165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18915920 - 18915814
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||| | |||||||| ||||||||   ||||||| || ||||||||    |||||| ||||||||||||||||||||||| |||||||     
T  18915920 agaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaagaagctccttgccactgaagcccaaa 18915821  T
Q  101 caacttg 107  Q
    |||||||    
T  18915820 caacttg 18915814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33418170 - 33418276
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| | |||||||  |||||||||| |||||| |    |||||| ||||||| |||||||||||||||||||||||     
T  33418170 agaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattctccgggtacgtctttggaaggagctccttgccactggagcccaaa 33418269  T
Q  101 caacttg 107  Q
    |||||||    
T  33418270 caacttg 33418276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34697388 - 34697282
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||||| |||||||| |||||||||| ||||||| |  ||||||||  |||||||  ||||||| |||||||||||||   || |||||    
T  34697388 agaggcatgcacactagccaagtgttgttccccctaagaatcgaacctggtattccccgaatacgtttttggaaggagctccttgccaccaaagtccaag 34697289  T
Q  101 caacttg 107  Q
    |||||||    
T  34697288 caacttg 34697282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34878043 - 34877937
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| |||| ||||  ||||||| |  ||||||||  |||||||| |||||||  |||||||||||||| |||||||     
T  34878043 agaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctccttgccactgaagcccaaa 34877944  T
Q  101 caacttg 107  Q
    |||||||    
T  34877943 caacttg 34877937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 41663911 - 41664017
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||||||   |||||||| ||||||||   ||||||| || ||||||||   ||||||| || |||| |||||||||||||||||||||||     
T  41663911 agaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaaa 41664010  T
Q  101 caacttg 107  Q
    |||||||    
T  41664011 caacttg 41664017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10336569 - 10336472
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagccca 98  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||||| ||  ||||| |   ||||||| ||||||| ||||||||||||||||| ||||    
T  10336569 agaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccggatacgtctttggaaggagctccttgccactggaaccca 10336472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 40288559 - 40288638
Alignment:
Q  28 ttccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||||  |||||||| || ||||||||  |||||||| ||||||  |||||||||||||| ||||||||||||||||    
T  40288559 ttccccctggaaatcgaacccggtattccccgaatacgtccttggaaagagctccttgccactcgagcccaagcaacttg 40288638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 892371 - 892457
Alignment:
Q  20 aagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaactt 106  Q
    ||||||| |||||||||  ||||||| || ||||||||  |||||||| ||| ||| ||||||||||||||| ||||||| ||||||    
T  892371 aagtgttgttccccctaggaatcgaacccggtattccccgaatacgtccttgaaaggagctccttgccactgaagcccaaacaactt 892457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8764044 - 8763938
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   || |||| ||  |||||||    |||||| ||||||| ||||||||||||| ||||||||||    
T  8764044 agaggcatgcgcactggccaagtgttgttccccctgggaaacgaacccgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaag 8763945  T
Q  101 caacttg 107  Q
    |||||||    
T  8763944 caacttg 8763938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 12036799 - 12036905
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | ||||  || |||||||||  |||| || ||||||||| |||  |||||| ||||||| |||| |||||||| |||||||||     
T  12036799 agaggcatgcgcactggccaagcattgttccccctaggaatcaaacccagtattctctaggtacgtccttggaaggagcttcttgccaccggagcccaaa 12036898  T
Q  101 caacttg 107  Q
    |||||||    
T  12036899 caacttg 12036905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18649407 - 18649513
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||||| ||  ||||| | | ||||||| ||||||| ||||| || ||||| |||  ||||    
T  18649407 agaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccagatacgtccttggaaggagctcattaccactagagttcaag 18649506  T
Q  101 caacttg 107  Q
    |||||||    
T  18649507 caacttg 18649513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25165453 - 25165349
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |   |||||| |||||| | | |||||||||| |||||||| |  |||||| ||||||| |||||||||||||| |||||||||    
T  25165453 agaggcatgcgcactggcagagtgttgttcccc-tgataatcgaatccggtattccccaggtacgtc-ttggaaggagctccttgccactagagcccaag 25165356  T
Q  101 caacttg 107  Q
    |||||||    
T  25165355 caacttg 25165349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 10173068 - 10173132
Alignment:
Q  43 gaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| |||||||| | ||||||| ||||||| ||| ||||||||||||||||||| |||||||    
T  10173068 gaatccggtattccccagatacgtccttggaaggagcaccttgccactggagcccaaacaacttg 10173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 15238211 - 15238267
Alignment:
Q  51 tattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||||  |||||| ||||||| |||||||||||| ||||||||||||||||||    
T  15238211 tattccctaggtacgtccttggaaggagctccttgccattggagcccaagcaacttg 15238267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 18808316 - 18808212
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagca 102  Q
    ||||||||||||| |||||| ||| ||||| || | ||| ||| |   |||||| || ||||||| ||||||||| ||| ||||||||||||||||| ||    
T  18808316 aggcatgcgcactggtcaagcgttgttccctctgagaattgaacctgttattccttagatacgtccttggaagaaactcattgccactggagcccaaaca 18808217  T
Q  103 acttg 107  Q
    |||||    
T  18808216 acttg 18808212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34719829 - 34719742
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgcca 88  Q
    ||||||||||||||| |||||| |||||||||  |   ||||||| ||||||||||| |  |||||| ||||||| ||||||||||||    
T  34719829 agaggcatgcgcactggtcaagcgttattcccagtgggaatcgaacccagtattccccaggtacgtccttggaaggagctccttgcca 34719742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 2567329 - 2567223
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| ||  |||  ||||||||| || |||||| |  |||||||| ||||||| |||||||||||| || |||||||     
T  2567329 agaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggtattctccgaatacgtccttggaaggagctccttgccagtgaagcccaaa 2567230  T
Q  101 caacttg 107  Q
    |||||||    
T  2567229 caacttg 2567223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 11398011 - 11398049
Alignment:
Q  69 ttggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  11398011 ttggaaggagctccttgccactggagcccaagcaacttg 11398049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 12744578 - 12744684
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||| ||||||||||||||||| ||| |||||||| |||||||||||   ||||||  | ||||||| ||||||| || ||  || |||||||| ||||     
T  12744578 agagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatacgtccttggaaggagttcaatgtcactggagtccaaa 12744677  T
Q  101 caacttg 107  Q
    |||||||    
T  12744678 caacttg 12744684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 12755568 - 12755674
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||| ||||||||||||||||| ||| |||||||| |||||||||||   ||||||  | ||||||| ||||||| || ||  || |||||||| ||||     
T  12755568 agagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatacgtccttggaaggagttcaatgtcactggagtccaaa 12755667  T
Q  101 caacttg 107  Q
    |||||||    
T  12755668 caacttg 12755674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15466018 - 15465912
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| |||||   |||| ||| ||||||||  |||||||| |  |||||||| ||||||||| ||||||| ||| | ||| |||||||||||||     
T  15466018 agaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattccccaaatacgtccttggaaggagccctttgtcactggagcccaaa 15465919  T
Q  101 caacttg 107  Q
    |||||||    
T  15465918 caacttg 15465912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33004070 - 33004176
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | ||||  || || |||||  |||||||||||  |||||||   ||||||| ||||||| |||||||   ||||||||||||||    
T  33004070 agaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccggatacgtccttggaaggagctcctcatcactggagcccaag 33004169  T
Q  101 caacttg 107  Q
    |||||||    
T  33004170 caacttg 33004176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 41696653 - 41696758
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||| | |||| ||||||||||| |||||||  |||||||| || |||||||  | ||||||| ||||||| ||||| |||||||| ||| | |||    
T  41696653 agaggcatacacactggtcaagtgttaatccccctggaaatcgaa-cccgtattcctcagatacgtccttggaaggagctcattgccactagagtctaag 41696751  T
Q  101 caacttg 107  Q
    |||||||    
T  41696752 caacttg 41696758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 41743266 - 41743220
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  41743266 atacgtccttggaaggagctccttgccaccggagcccaagcaacttg 41743220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 14357748 - 14357703
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaactt 106  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  14357748 atacgtccttggaagaaactccttgccactggagctcaagcaactt 14357703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43959876 - 43959981
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| ||||||||   ||| ||| ||  |||||||    |||||||||||||| ||| |||||||||||||||||||     
T  43959876 agaggcatgcgcactggccaagcgttgttccccctgggaattgaacccgatattccccgggtacgtcattggaaggagcaccttgccactggagcccaat 43959975  T
Q  101 caactt 106  Q
    ||||||    
T  43959976 caactt 43959981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 5063928 - 5064004
Alignment:
Q  31 cccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||||||| ||||||| | ||||||| ||||||| |||| ||||||||  ||||| || |||||||    
T  5063928 cccctaagaatcgaatccaatattccccagatacgtccttggaaggagcttcttgccaccagagcctaaacaacttg 5064004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 9659236 - 9659338
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagca 102  Q
    |||||||||||||||||||  ||| |||||| |   ||||||| || ||||||||  | |||||| || |||  |||||||||||||||||||| |||||    
T  9659236 aggcatgcgcactagtcaaacgttgttcccc-tgggaatcgaacccggtattccccgagtacgtccttagaatgagctccttgccactggagcctaagca 9659334  T
Q  103 actt 106  Q
    ||||    
T  9659335 actt 9659338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 17358528 - 17358615
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccact 90  Q
    ||||||||||| | |||||| ||| ||| |||| | ||||||| || |||||||| ||||||||| ||| ||  ||||||||||||||    
T  17358528 aggcatgcgcattggtcaagcgttgttctccctgagaatcgaacccggtattccccaaatacgtccttgaaatgagctccttgccact 17358615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 32151039 - 32151082
Alignment:
Q  63 acgtcattggaagaagctccttgccactggagcccaagcaactt 106  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  32151039 acgtccttggaaggagctccttgccactggagcccaaacaactt 32151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 35908791 - 35908752
Alignment:
Q  20 aagtgttattccccctaaaaatcgaatccagtattcccta 59  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  35908791 aagtgttgttccccctaaaaatcgaatccggtattcccta 35908752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 45361940 - 45362035
Alignment:
Q  4 ggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    |||||||||||| | |||| ||| |||| ||| | ||||||| || ||||||||    |||||| ||||||| ||||||||||||||| |||||||    
T  45361940 ggcatgcgcactggccaagcgttgttcctcctgagaatcgaacccggtattcccagggtacgtccttggaaggagctccttgccactgaagcccaa 45362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 8905265 - 8905311
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||||||||||| |||||||||||||| ||| |||| |||||||    
T  8905265 atacgtcattggaaggagctccttgccactagagtccaaacaacttg 8905311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 26325805 - 26325759
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||| ||| ||||||||||||||||||||| |||||||||    
T  26325805 atacgtccttgaaaggagctccttgccactggagccctagcaacttg 26325759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 31152769 - 31152663
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||| |||||||   |||| |||||||||||   |||||||| || |||||||||   ||| || ||||||  |||||||||||||| ||||||||     
T  31152769 agaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattccctgggtacatccttggaaagagctccttgccactagagcccaaa 31152670  T
Q  101 caacttg 107  Q
    |||||||    
T  31152669 caacttg 31152663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 34334353 - 34334439
Alignment:
Q  4 ggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccact 90  Q
    |||||||||||| | |||||||| ||||||||   ||||||| || ||||||||   ||||||| ||||||  ||||||||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccact 34334439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 42744800 - 42744734
Alignment:
Q  41 tcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||| || |||||||||   |||||| ||||||| ||||| |||||||||||| ||||||||||||    
T  42744800 tcgaacccggtattccctgggtacgtccttggaaggagctcattgccactggagtccaagcaacttg 42744734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 45536761 - 45536656
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| | |||| ||| |||||| || |||||||| || |||||| |    ||||||||||||||| | |||| |||||| |||||||||    
T  45536761 agaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtattctccgggtacgtcattggaaga-gttcctcgccactagagcccaag 45536663  T
Q  101 caacttg 107  Q
    |||||||    
T  45536662 caacttg 45536656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 46929852 - 46929898
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| |||| ||||||||| ||||||||||||||||    
T  46929852 atacgtctttggaaggagcttcttgccactagagcccaagcaacttg 46929898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 50503416 - 50503522
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||||||||| ||||||||   ||||||| ||  |||||||   ||||||| ||| ||| ||||||| |||||| ||| |||      
T  50503416 agaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattccccggatacgtccttgaaaggagctcctcgccactagagtccata 50503515  T
Q  101 caacttg 107  Q
    |||||||    
T  50503516 caacttg 50503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 17389823 - 17389719
Alignment:
Q  2 gaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagc 101  Q
    |||||||||||||| |||||   || ||||||| |||| ||||||||  |||| ||   | ||||||||| ||| |||||||||||||||||| ||||||    
T  17389823 gaggcatgcgcactggtcaaacattgttcccccgaaaa-tcgaatccgatatttcccggaaacgtcattgaaaggagctccttgccactggagtccaagc 17389725  T
Q  102 aacttg 107  Q
     |||||    
T  17389724 tacttg 17389719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 21429662 - 21429759
Alignment:
Q  10 cgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| | |||| ||| ||| |||||||||||||| | | |||| |  ||||||||| ||||||| | |||| || ||||||||||||| |||||||    
T  21429662 cgcactggccaagcgttgttctccctaaaaatcgaacctaatatttctcaaatacgtccttggaaggaactccatgtcactggagcccaaacaacttg 21429759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 32142903 - 32142956
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattcc 56  Q
    ||||||||||||| | |||||||| |||||||| ||||||||| || |||||||    
T  32142903 aggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccggtattcc 32142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 47313002 - 47313059
Alignment:
Q  50 gtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||| | ||||||| ||||||| | ||| ||||||||||||||||| |||||||    
T  47313002 gtattccccagatacgtccttggaaggatctcgttgccactggagcccaaacaacttg 47313059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 32863 - 32819
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaactt 106  Q
    |||||| ||||||| ||||| ||||||||||||||||| ||||||    
T  32863 tacgtccttggaaggagctcattgccactggagcccaaacaactt 32819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1446883 - 1446777
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   ||||||| || ||||||||   ||||||| ||||||| ||||||||||||||||||||||||    
T  1446883 agaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaag 1446784  T
Q  101 caacttg 107  Q
    |||||||    
T  1446783 caacttg 1446777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29895844 - 29895738
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   ||||||| || ||||||||   ||||||| ||||||| ||||||||||||||||||||||||    
T  29895844 agaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaag 29895745  T
Q  101 caacttg 107  Q
    |||||||    
T  29895744 caacttg 29895738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 43458670 - 43458564
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||| |||   ||||||||||||||||||| ||||||||| ||||||  |||| |||||||||||||||||||    
T  43458670 agaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtccttggaatgagcttcttgccactggagcccaag 43458571  T
Q  101 caacttg 107  Q
    |||||||    
T  43458570 caacttg 43458564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 20421830 - 20421727
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||  |||||||| ||||||||||| | ||||||| ||| ||| ||||||||||||||| ||||||||    
T  20421830 agaggcatgcgcactggccaagtgttgttccccctggaaatcgaa-ccagtattccccagatacgtctttgaaaggagctccttgccactgaagcccaag 20421732  T
Q  101 caact 105  Q
    |||||    
T  20421731 caact 20421727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 2559364 - 2559258
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||| |||| ||||||||||| |||||||| |  |||||| ||||||| ||||| |||||||||||||||||     
T  2559364 agaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatccggtattccccaggtacgtccttggaaggagctcgttgccactggagcccaaa 2559265  T
Q  101 caacttg 107  Q
    |||||||    
T  2559264 caacttg 2559258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3574500 - 3574606
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||| ||||   ||| |||  | ||||||||||  |||||| ||||||| ||||||||||||||||||||||||    
T  3574500 agaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttggaaggagctccttgccactggagcccaag 3574599  T
Q  101 caacttg 107  Q
    |||||||    
T  3574600 caacttg 3574606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6779268 - 6779162
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | || ||||| ||||||||   ||||||| || |||||| | |  |||||| |||||||||||||||||||||||||||||||     
T  6779268 agaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggtattctccaggtacgtccttggaagaagctccttgccactggagcccaaa 6779169  T
Q  101 caacttg 107  Q
    |||||||    
T  6779168 caacttg 6779162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26480003 - 26480109
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||| ||| | ||||||||||||||| ||| |||||||  | |||||||| |  |||||  ||||||| |||||||||||| ||||||||||     
T  26480003 agaggcatgcgtactggccaagtgttattccccttaagaatcgaactcggtattccccatgtacgtacttggaaggagctccttgccagtggagcccaaa 26480102  T
Q  101 caacttg 107  Q
    |||||||    
T  26480103 caacttg 26480109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33647778 - 33647672
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||| ||| ||||| |||||| ||| ||| ||||  |||||||| || |||||||| | ||||||| ||| ||| |||||||||||||| |||||||||    
T  33647778 agaggaatgtgcactggtcaagcgttgttctccctggaaatcgaacccggtattccccagatacgtccttgaaaggagctccttgccactagagcccaag 33647679  T
Q  101 caacttg 107  Q
    |||||||    
T  33647678 caacttg 33647672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 55921091 - 55920985
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||||||   |||||||| ||||||||   ||||||| || ||||||||    | |||| ||||||| ||||||||||||||||||||||||    
T  55921091 agaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaag 55920992  T
Q  101 caacttg 107  Q
    |||||||    
T  55920991 caacttg 55920985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 24166469 - 24166401
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| |||||||||||  | |||||| ||||||| ||||||||||||||||||||||| |||||||    
T  24166469 aatcgaacccagtattccccgagtacgtccttggaaggagctccttgccactggagcccaatcaacttg 24166401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 48317347 - 48317435
Alignment:
Q  19 caagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||| ||| |||| ||| ||||||||||||||||||     |||||||||||||||  ||||| |||||||||||||||||||||||||    
T  48317347 caagcgttgttcctcctgaaaatcgaatccagtatttttcgaatacgtcattggaatgagctctttgccactggagcccaagcaacttg 48317435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 54524951 - 54524883
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||||  |||||| ||||||||||||||||||| ||||| |||||||| ||||| ||||||||||    
T  54524951 aatcgaatctggtattctctaaatacgtcattggaaggagctctttgccactagagcctaagcaacttg 54524883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 38075490 - 38075384
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| || ||||| | ||||||| || |||||| |  |||||||| ||||||| | ||||||||| |||||||||||     
T  38075490 agaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggtattctccgaatacgtccttggaaggaactccttgccgctggagcccaaa 38075391  T
Q  101 caacttg 107  Q
    |||||||    
T  38075390 caacttg 38075384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 38166084 - 38165978
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||| |||||||||| | |||| ||| ||||||||   |||| || |||||||||||   ||||||| ||||||| |||||||||||| ||||||||||     
T  38166084 agagccatgcgcactggccaagcgttgttccccctgggaatccaacccagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaa 38165985  T
Q  101 caacttg 107  Q
    |||||||    
T  38165984 caacttg 38165978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 47078515 - 47078409
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| | |||| ||| ||||||||   ||||||| || ||||||||    |||||| ||||||| ||||||||||||||||| ||||||    
T  47078515 agaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggaacccaag 47078416  T
Q  101 caacttg 107  Q
    |||||||    
T  47078415 caacttg 47078409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 6032755 - 6032800
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||    
T  6032755 tacgtccttggaaggagctccttgccactggagcccaagcaacttg 6032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 27531749 - 27531817
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| || |||||||||   |||||| ||||||| |||||||||||||||||| ||||||||||||    
T  27531749 aatcgaacccggtattccctgggtacgtccttggaaggagctccttgccactggagtccaagcaacttg 27531817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8889079 - 8888973
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||| ||||||||||   |||||||| |||||||||  ||||||| || ||||||||   ||||||| || |||| ||||||||||| || ||||||||     
T  8889079 agagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccgctagagcccaaa 8888980  T
Q  101 caacttg 107  Q
    |||||||    
T  8888979 caacttg 8888973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15732502 - 15732608
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| | |||||||| |||||| ||  ||||||| || |||||| |   ||||||| |||||||||  | ||||||||||||||||||     
T  15732502 agaggcatgtgcactggccaagtgttgttccccatatgaatcgaacccggtattctccggatacgtccttggaagaattttcttgccactggagcccaaa 15732601  T
Q  101 caacttg 107  Q
    |||||||    
T  15732602 caacttg 15732608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 27248425 - 27248379
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||||||    
T  27248425 atacgtccttggaaggagctcgttgccactggagcccaagcaacttg 27248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 41162996 - 41163042
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||||    
T  41162996 atacgtccttggaaggagctccttgtcactggagcccaagcaacttg 41163042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 52950139 - 52950033
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||| |||||||||| | |||| ||| ||||||||   ||||||| ||  ||||||| |  |||||| ||||||| |||||||||||||| ||||||||     
T  52950139 agagtcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattccccaggtacgtccttggaaggagctccttgccactagagcccaaa 52950040  T
Q  101 caacttg 107  Q
    |||||||    
T  52950039 caacttg 52950033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 14567247 - 14567202
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||    
T  14567247 tacgtccttggaatgagctccttgccactggagcccaagcaacttg 14567202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 15840026 - 15840083
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcc 96  Q
    ||||||| || |||||||| || |||||| ||||||| ||||||||||||||||||||    
T  15840026 aatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactggagcc 15840083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 12703610 - 12703705
Alignment:
Q  12 cactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||| |||||| ||| ||||| ||  ||||||||  |||||||||   | |||||| || |||| | |||||||||||||||||||||||||||||    
T  12703610 cactggtcaagcgttgttcccactggaaatcgaactcagtattcctcgagtacgtcctttgaaggatctccttgccactggagcccaagcaacttg 12703705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 20128364 - 20128273
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggag 94  Q
    ||||||||||||| | ||||  || |||||||| | ||||||| |||||||||||   ||||||| ||||||| | ||||||||| ||||||    
T  20128364 aggcatgcgcactggccaagcattgttccccctgagaatcgaacccagtattccccggatacgtccttggaaggaactccttgccgctggag 20128273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8064852 - 8064906
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattc 55  Q
    ||||||||||||||| ||||||||||||||||| |   ||||||| |||||||||    
T  8064852 agaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtattc 8064906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 14124073 - 14123967
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | ||| |||| ||||||||   ||||||| |  |||||||  || |||||  ||||||| |||| ||||||| ||||||||||     
T  14124073 agaggcatgcgcactggccaaatgttgttccccctgggaatcgaacctggtattcctcaagtacgttcttggaaggagcttcttgccattggagcccaaa 14123974  T
Q  101 caacttg 107  Q
    |||||||    
T  14123973 caacttg 14123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 15829696 - 15829650
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||| ||||||||||||| ||||||||||||| |||||||    
T  15829696 atacgtccttgaaagaagctccttgtcactggagcccaaacaacttg 15829650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 19651559 - 19651605
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| ||||| ||||||||||||||||| |||||||    
T  19651559 atacgtccttggaaggagctcattgccactggagcccaaacaacttg 19651605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 53599117 - 53599011
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||  ||| |||| |||   ||||||| || ||||||||    |||||| ||||||| |||||||||||| ||||||||||     
T  53599117 agaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaa 53599018  T
Q  101 caacttg 107  Q
    |||||||    
T  53599017 caacttg 53599011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 1940889 - 1940934
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||| |||||||| |||||||    
T  1940889 tacgtccttggaaggagctccttgccactagagcccaaacaacttg 1940934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 2686525 - 2686614
Alignment:
Q  17 gtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaactt 106  Q
    |||||||||| || ||||| |||||||||||   ||||| |  | |||||| |||||| |||||||||||||||  ||||||| ||||||    
T  2686525 gtcaagtgttgtttcccctgaaaatcgaatctgatattctccgagtacgtctttggaaaaagctccttgccactaaagcccaaacaactt 2686614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 5472902 - 5473007
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| || ||||| | |||| || |  ||||||||   ||||||| ||| ||  |||||||||||||||||||||||     
T  5472902 agaggcatgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccggatacgtccttgaaatgagctccttgccactggagcccaaa 5473001  T
Q  101 caactt 106  Q
    ||||||    
T  5473002 caactt 5473007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 34667717 - 34667762
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||| |||||||| |||||||    
T  34667717 tacgtccttggaaggagctccttgccactagagcccaaacaacttg 34667762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 41339510 - 41339555
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||| |||||||| |||||||    
T  41339510 tacgtccttggaaggagctccttgccactagagcccaaacaacttg 41339555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 13552152 - 13552068
Alignment:
Q  20 aagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaac 104  Q
    ||||||| |||| ||| | ||||||| ||  |||||||   ||||||  ||||||| ||||||||||||||||||||||| ||||    
T  13552152 aagtgttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 13552068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 29588731 - 29588687
Alignment:
Q  63 acgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||| ||||||  ||||||||||||||||||||||| |||||||    
T  29588731 acgtctttggaatgagctccttgccactggagcccaatcaacttg 29588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 38841430 - 38841525
Alignment:
Q  11 gcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| |||| ||| ||  |||||||||||||| |  |||||||| |  |||||| ||||||||||||| ||||||||| ||| |||| ||||||    
T  38841430 gcactagacaagcgttgttttccctaaaaatcgaacctggtattcccgag-tacgtccttggaagaagctcattgccactgaagctcaagtaacttg 38841525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 40272385 - 40272489
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||||| |  |||||||| ||  |||||||   |||| |||||||||  |||||||| |||| |||||||||     
T  40272385 agaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattccccggatacatcattggaaagagctccttaccaccggagcccaaa 40272484  T
Q  101 caact 105  Q
    |||||    
T  40272485 caact 40272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33401853 - 33401958
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||| |||||||||| |||||||| ||||||||| || ||||||||  | |||||| ||| ||| |||||||||||||||||||||||     
T  33401853 agaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgtccttgaaaggagctccttgccactggagcccaaa 33401952  T
Q  101 caactt 106  Q
    ||||||    
T  33401953 caactt 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2467172 - 2467278
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||| |||||||||| | |||| ||| ||||||||  |||||||| || ||||||||   ||||||| ||||||| ||||||||||||||||||||||||    
T  2467172 agagacatgcgcactggccaagagttgttccccctggaaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaag 2467271  T
Q  101 caacttg 107  Q
    |||||||    
T  2467272 caacttg 2467278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8141158 - 8141052
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| || |||||  |||||||| || ||||||||  |||||||| ||||||| |||||||||||||||||||||||     
T  8141158 agaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaagcagctccttgccactggagcccaaa 8141059  T
Q  101 caacttg 107  Q
    |||||||    
T  8141058 caacttg 8141052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 3418571 - 3418673
Alignment:
Q  5 gcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaac 104  Q
    ||||||||||| | |||||||| |||| ||||||||||||| ||  ||||||| | ||||||| ||||||| ||||||||||||| |||| |||| ||||    
T  3418571 gcatgcgcactggccaagtgttgttcctcctaaaaatcgaacccgatattccccagatacgtccttggaaggagctccttgccacgggagtccaaacaac 3418670  T
Q  105 ttg 107  Q
    |||    
T  3418671 ttg 3418673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14666125 - 14666231
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| || |||||   ||||||| || ||||||||   ||||||| ||||||  ||||||||||||||||||||||||    
T  14666125 agaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccactggagcccaag 14666224  T
Q  101 caacttg 107  Q
    |||||||    
T  14666225 caacttg 14666231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 30903361 - 30903286
Alignment:
Q  32 ccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||| |||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||| ||| |||||||    
T  30903361 ccctgaaaatcgaatccggtattccccgaatacgtcattggaagaagctccttactactggagcgcaaacaacttg 30903286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1013031 - 1013137
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| | ||| | |||| ||| ||||||||   ||||||| || ||||||||   ||||||| |||||| |||||||||||||||||||||||||    
T  1013031 agaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctccttgccactggagcccaag 1013130  T
Q  101 caacttg 107  Q
    |||||||    
T  1013131 caacttg 1013137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10927662 - 10927556
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||| ||||  ||||||| || ||||||||    |||||| ||| ||||||||||||||||||| ||||||||    
T  10927662 agaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccgggtacgtccttgaaagaagctccttgccactgaagcccaag 10927563  T
Q  101 caacttg 107  Q
    |||||||    
T  10927562 caacttg 10927556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 38922470 - 38922574
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagca 102  Q
    ||||||||||||| | |||| ||| ||||| ||   ||||||| || ||||||||    |||||| ||||||| ||||||||||||||||||||||||||    
T  38922470 aggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagca 38922569  T
Q  103 acttg 107  Q
    |||||    
T  38922570 acttg 38922574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15884610 - 15884715
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| |||||| |   ||||||| || |||||||| |  |||||| ||||||| |||||||| ||||||||||||||     
T  15884610 agaggcatgcgcacttgccaagtgttgttcccc-tgggaatcgaacccggtattccccaggtacgtccttggaaggagctccttaccactggagcccaat 15884708  T
Q  101 caacttg 107  Q
    |||||||    
T  15884709 caacttg 15884715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44893332 - 44893438
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||| | ||||  || ||||||||| |||| ||| || ||||||||    |||||| ||||||| |||||||||||||||||||||||     
T  44893332 agaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaaa 44893431  T
Q  101 caacttg 107  Q
    |||||||    
T  44893432 caacttg 44893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17981497 - 17981392
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||| |||||| ||| ||||||||   ||||||| || ||||| ||    ||| || ||||||| ||||||||||||||||||||||||    
T  17981497 agaggcatgcacactggtcaagagttgttccccctgggaatcgaacccggtatttcccgggtacatccttggaaggagctccttgccactggagcccaag 17981398  T
Q  101 caactt 106  Q
    ||||||    
T  17981397 caactt 17981392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 38235900 - 38235855
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||    
T  38235900 tacgtccttggaagaagttccttgccactggagcccaagcaacttg 38235855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 34710623 - 34710727
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagca 102  Q
    ||||||||||||||| |||||||| || |||||   |||||||||| |||||  |  | |||||| ||||||||| || |||||||| ||||||||| ||    
T  34710623 aggcatgcgcactagccaagtgttgtttcccctgggaatcgaatccggtattttccgagtacgtccttggaagaaacttcttgccaccggagcccaaaca 34710722  T
Q  103 acttg 107  Q
    |||||    
T  34710723 acttg 34710727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 24837230 - 24837192
Alignment:
Q  69 ttggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  24837230 ttggaaggagctccttgccactggagcccaagcaacttg 24837192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 7673758 - 7673813
Alignment:
Q  51 tattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| | ||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  7673758 tattccccagatacgtccttggaaggagctccttgccactggag-ccaagcaacttg 7673813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 16893975 - 16893887
Alignment:
Q  19 caagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||| ||||||||||||   ||||||| ||  |||||||   ||||||||||||||| || |||||||||||  |||||||||||||||    
T  16893975 caagcgttattccccctgtgaatcgaacccgatattccccggatacgtcattggaaggagttccttgccactatagcccaagcaacttg 16893887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 43027323 - 43027255
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||||||| ||||||||  ||| ||  ||||| ||||||||||||||||| |||||||    
T  43027323 aatcgaacccagtattccccaaatacgttcttgaaatgagctcattgccactggagcccaaacaacttg 43027255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 43032957 - 43032853
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| ||||||||   ||||||||||  |||| || | |||| |  ||||||| | |||||||||||||||||||||     
T  43032957 agaggcatgcgcactggccaagcgttgttccccctgggaatcgaatccgatatttcccagatacatttttggaaggaactccttgccactggagcccaaa 43032858  T
Q  101 caact 105  Q
    |||||    
T  43032857 caact 43032853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 583868 - 583764
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||||| ||| |||||  ||  ||||||| || ||||| |   | |||||| ||||||| |||||||||||||| ||||||||     
T  583868 agaggcatgcgcactggtcaagcgttgttccc--taggaatcgaacccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaa 583771  T
Q  101 caacttg 107  Q
    |||||||    
T  583770 caacttg 583764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 6100525 - 6100422
Alignment:
Q  4 ggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaa 103  Q
    |||||||||||| | |||| ||| |||| |||   ||||||| || ||||||||   ||||||| ||| ||| ||||||||||||||| ||||||| |||    
T  6100525 ggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaa 6100426  T
Q  104 cttg 107  Q
    ||||    
T  6100425 cttg 6100422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9860049 - 9860156
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaa-atacgtcattggaagaagctccttgccactggagcccaa 99  Q
    |||||||||| |||| | |||||||| ||||||||   ||||||| || ||||||||    ||||||| ||||||| ||||| ||||||||||| |||||    
T  9860049 agaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattcccccggatacgtccttggaaggagctctttgccactggatcccaa 9860148  T
Q  100 gcaacttg 107  Q
     |||||||    
T  9860149 acaacttg 9860156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 18091394 - 18091351
Alignment:
Q  64 cgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||| |||||| |||||||||||||||||||||||| |||||||    
T  18091394 cgtccttggaataagctccttgccactggagcccaaacaacttg 18091351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 10535517 - 10535563
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| |||||||||||||||||| |||| |||||||    
T  10535517 atacgtccttggaaggagctccttgccactggagtccaaacaacttg 10535563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 22810076 - 22810030
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| |||||||||||||| |||||||| |||||||    
T  22810076 atacgtccttggaaggagctccttgccactagagcccaaacaacttg 22810030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 45521224 - 45521119
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||||||  ||||||||| |||||| |   ||||||| || ||||||||    ||| || ||||||  | ||||||||||||||||||||||    
T  45521224 agaggcatgcgcactgatcaagtgttgttcccc-tgggaatcgaacccggtattccccgggtacatccttggaatgaactccttgccactggagcccaag 45521126  T
Q  101 caacttg 107  Q
    |||||||    
T  45521125 caacttg 45521119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 34846809 - 34846764
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||  ||||||||||||||||||||||| |||||||    
T  34846809 tacgtccttggaatgagctccttgccactggagcccaaacaacttg 34846764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 13085542 - 13085482
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    ||||||| || ||||||||   ||||||| ||||||| ||||||| |||||||||||||||    
T  13085542 aatcgaacccggtattccccggatacgtccttggaaggagctcctcgccactggagcccaa 13085482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 17845743 - 17845683
Alignment:
Q  47 ccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||||||  | ||| || ||||||| ||||| ||||||||||||||||| |||||||    
T  17845743 ccagtattccccgagtacatccttggaaggagctcattgccactggagcccaaacaacttg 17845683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13664313 - 13664225
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccac 89  Q
    ||||||||||||||| | |||||||| |||||||| | |||||||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  13664313 agaggcatgcgcactggccaagtgttgttccccctgataatcgaatccggtattccctagatacgtccttggaaggagctccttgccac 13664225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1538484 - 1538378
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   ||||||| || ||||||||  |||||||| | ||||| |||||||||||||||||||||||     
T  1538484 agaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaa 1538385  T
Q  101 caacttg 107  Q
    |||||||    
T  1538384 caacttg 1538378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19572777 - 19572671
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   |||| || || ||||||||   ||||||| ||||||| ||||||||||||||||||||||||    
T  19572777 agaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaag 19572678  T
Q  101 caacttg 107  Q
    |||||||    
T  19572677 caacttg 19572671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14588671 - 14588774
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||||| |||||||| ||| ||||||||| ||  ||||||| | ||||||| ||| |||||||||||||||||| ||||||| |    
T  14588671 agaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaacccgatattccccagatacgtccttgaaagaagctccttgccact-gagcccatg 14588769  T
Q  101 caact 105  Q
    |||||    
T  14588770 caact 14588774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 28857181 - 28857075
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   ||||||| || ||||||||    | |||| ||||||| ||||||||||||||||||||||||    
T  28857181 agaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaag 28857082  T
Q  101 caacttg 107  Q
    |||||||    
T  28857081 caacttg 28857075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5731974 - 5732080
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||| |||   ||||||| || ||||||||    |||||| ||||||| ||||||||||||||||||||||||    
T  5731974 agaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaag 5732073  T
Q  101 caacttg 107  Q
    |||||||    
T  5732074 caacttg 5732080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25417237 - 25417335
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    ||||||||||||||| | |||| ||| ||||||||   ||||||| || ||||||||  | |||||| ||||||| |||||||||||||||||||||||    
T  25417237 agaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaa 25417335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42086380 - 42086274
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||||| ||| ||||||||   ||||||| || |||||||     |||||| ||||||| ||||||||||||| ||||||||||    
T  42086380 agaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccaccggagcccaag 42086281  T
Q  101 caacttg 107  Q
    |||||||    
T  42086280 caacttg 42086274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 16755109 - 16755008
Alignment:
Q  6 catgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaact 105  Q
    |||||||||| | |||||||| || | ||| ||||||||| |||||||||||   ||||||| ||||||  ||||||||||||||| |||||||| ||||    
T  16755109 catgcgcactggccaagtgttgtttctcctgaaaatcgaacccagtattccccggatacgtctttggaaagagctccttgccactgaagcccaaggaact 16755010  T
Q  106 tg 107  Q
    ||    
T  16755009 tg 16755008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18136334 - 18136440
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| ||||   |||||||| ||||||||   ||||||| || |||||| |   ||||||| ||||||| |||||||||||||||||||||||     
T  18136334 agaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactggagcccaaa 18136433  T
Q  101 caacttg 107  Q
    |||||||    
T  18136434 caacttg 18136440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26077194 - 26077088
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| | |||| ||| ||||| ||   ||||||| | ||||||||| ||||||||| ||||||  |||||||| ||||||||||||||     
T  26077194 agaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagctccttaccactggagcccaaa 26077095  T
Q  101 caacttg 107  Q
    |||||||    
T  26077094 caacttg 26077088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30349632 - 30349526
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||   || ||||||||| ||||| || || ||||||||   ||||||| ||||||| | |||||||||||||||||||||     
T  30349632 agaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggaactccttgccactggagcccaaa 30349533  T
Q  101 caacttg 107  Q
    |||||||    
T  30349532 caacttg 30349526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 35561872 - 35561978
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||| ||||| ||||| ||  || |||||  |  |||||||   ||||||||||||||| ||||| |||||||||||| |||||    
T  35561872 agaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccccggatacgtcattggaaggagctctttgccactggagtccaag 35561971  T
Q  101 caacttg 107  Q
    |||||||    
T  35561972 caacttg 35561978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 6767166 - 6767211
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||    
T  6767166 tacgtccttggaaggagctccttgccactggagcccaagcaacttg 6767211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 18327786 - 18327725
Alignment:
Q  38 aaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    |||||||| |||||||| ||| |||||||| ||||||| |||||||||||||||||| ||||    
T  18327786 aaatcgaacccagtatttcctgaatacgtccttggaaggagctccttgccactggagtccaa 18327725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 2485212 - 2485144
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| |||||||||||| |||||||| ||||||  |||||||||||| ||||| |||| |||||||    
T  2485212 aatcgaacccagtattccctgaatacgtccttggaatgagctccttgccattggagtccaaacaacttg 2485144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 28856967 - 28856924
Alignment:
Q  64 cgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
T  28856967 cgtccttggaaggagctccttgccactggagcccaagcaacttg 28856924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20525891 - 20525785
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |  ||||||| |||| |||   ||||||| ||  |||||||   |||| || ||| ||| ||||||||||||||||||||||||    
T  20525891 agaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccgatattccccggatacatccttgaaaggagctccttgccactggagcccaag 20525792  T
Q  101 caacttg 107  Q
    |||||||    
T  20525791 caacttg 20525785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 23383641 - 23383595
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  23383641 atacgtccttggaaggagctccttgccactggagcccaaacaacttg 23383595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 35403566 - 35403664
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    |||| |||||||| | | |||| ||| |||||||| | ||||||| || ||||| ||  | |||||| ||||||| |||||||||||||||||||||||    
T  35403566 agagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactggagcccaa 35403664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 7866573 - 7866528
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||    
T  7866573 tacgtccttggaaggagctccttgccactggagtccaagcaacttg 7866528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8513572 - 8513466
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| | ||||  || || ||||||  ||||||| || ||||||||    |||||| ||||||| |||||||||||||| ||| |||||    
T  8513572 agaggcatgtgcactggccaagcattgtttcccctaggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccacttgagtccaag 8513473  T
Q  101 caacttg 107  Q
    |||||||    
T  8513472 caacttg 8513466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 12705063 - 12704961
Alignment:
Q  5 gcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaac 104  Q
    |||||| |||| |||||| ||| |||| |||   ||||||| || ||||||||    |||||| ||||||| |||||||||||||||||| |||| ||||    
T  12705063 gcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaac 12704964  T
Q  105 ttg 107  Q
    |||    
T  12704963 ttg 12704961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30995174 - 30995068
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||| || | |||||||| ||||||||   ||||||| |  |||||||| |  |||||| ||||||| ||||||||||||||  | |||| |    
T  30995174 agaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgtacgtccttggaaggagctccttgccactaaaacccagg 30995075  T
Q  101 caacttg 107  Q
    |||||||    
T  30995074 caacttg 30995068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38897773 - 38897878
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| |||||| |  |||||||| || |||||||| | ||||||| ||| ||  |||||||||||||| |||  ||||    
T  38897773 agaggcatgcgcactggccaagcgttgttcccc-tggaaatcgaacccggtattccccatatacgtccttgtaaagagctccttgccacttgagttcaag 38897871  T
Q  101 caacttg 107  Q
    |||||||    
T  38897872 caacttg 38897878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 41163581 - 41163619
Alignment:
Q  69 ttggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  41163581 ttggaaggagctccttgccactggagcccaaacaacttg 41163619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 9812864 - 9812819
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||||||| |||| |||||||    
T  9812864 tacgtccttggaaggagctccttgccactggagtccaaacaacttg 9812819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 14152065 - 14152008
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcc 96  Q
    ||||||| || |||||||| |  ||| |||||||||| ||||||||||||||||||||    
T  14152065 aatcgaacccggtattccccaggtacatcattggaaggagctccttgccactggagcc 14152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 14728106 - 14728029
Alignment:
Q  30 ccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| |||||||||||| ||||| || ||| | | | ||||||  ||||| ||||||||||||||||| |||||||    
T  14728106 ccccctgaaaatcgaatccggtatttcccaaaaatgaccttggaatgagctcattgccactggagcccaaacaacttg 14728029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 20156248 - 20156301
Alignment:
Q  51 tattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaac 104  Q
    |||||||  ||||| |||||||||| ||||| || |||||||||||||||||||    
T  20156248 tattccccgaatacatcattggaaggagctctttaccactggagcccaagcaac 20156301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 20516460 - 20516557
Alignment:
Q  6 catgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaa 103  Q
    |||||||||| | |||| ||| ||||||||||||||||| |||| |||| ||    || ||| ||| ||||||||||||| |||| || |||||||||    
T  20516460 catgcgcactggccaagcgttgttccccctaaaaatcgattccaatatttcccgggtatgtccttgaaagaagctccttgtcactagaacccaagcaa 20516557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 20692925 - 20692880
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||||||||| |||||||| |||||||| |||||||    
T  20692925 tacgtccttggaagaagctctttgccactagagcccaaacaacttg 20692880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 37263233 - 37263188
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| || |||| | |||||||||||||||||||||||||||||    
T  37263233 tacgtccttagaaggaactccttgccactggagcccaagcaacttg 37263188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 28862828 - 28862784
Alignment:
Q  51 tattccctaaatacgtcattggaagaagctccttgccactggagc 95  Q
    |||||||  |||||||| ||||||| |||||||||||||||||||    
T  28862828 tattccccgaatacgtctttggaaggagctccttgccactggagc 28862784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 27875142 - 27875247
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| ||||| | |||||||||||||||||   |||||||||| |||||||| | ||||||| ||||||| |||| ||||||||||||||||||     
T  27875142 agaggcatgtgcactggccaagtgttattccccctgggaatcgaatccggtattccccagatacgtc-ttggaaggagctacttgccactggagcccaaa 27875240  T
Q  101 caacttg 107  Q
    |||||||    
T  27875241 caacttg 27875247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 48804738 - 48804632
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| |||||| |   ||||||| || ||||||||   ||||||| ||||||| ||||||||||||||||||||||||    
T  48804738 agaggcatgcgcactggccaagtgttgttccccttgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaag 48804639  T
Q  101 caacttg 107  Q
    |||||||    
T  48804638 caacttg 48804632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4195256 - 4195362
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||||| ||| |||| |||| |||  ||||||||  | ||||||||   ||||||| |||| || ||||||||||||||||||||||||    
T  4195256 agaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccggatacgtccttggcaggagctccttgccactggagcccaag 4195355  T
Q  101 caacttg 107  Q
    |||||||    
T  4195356 caacttg 4195362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4973164 - 4973270
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||| | ||||||||||||||||| ||  ||||||| ||  |||||||  |||| ||| ||||||||||||||||| || ||||||||||     
T  4973164 agaggcatgcgcattggtcaagtgttattccccgtaggaatcgaacccgatattccccgaataagtccttggaagaagctccttgtcagtggagcccaaa 4973263  T
Q  101 caacttg 107  Q
    |||||||    
T  4973264 caacttg 4973270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 17748436 - 17748542
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| ||||||||   ||||||| || ||||||||  |||||||| |||||||||||| ||||||||| ||||||||     
T  17748436 agaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgaatacgtccttggaagaagctgcttgccactagagcccaaa 17748535  T
Q  101 caacttg 107  Q
    |||||||    
T  17748536 caacttg 17748542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18785724 - 18785618
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| |||||||||  ||||||| || ||||||||    |||||| ||||||| |||| ||||||||||||||||| |    
T  18785724 agaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccgggtacgtccttggaaggagcttcttgccactggagcccatg 18785625  T
Q  101 caacttg 107  Q
    |||||||    
T  18785624 caacttg 18785618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 43925567 - 43925461
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||||||||   |||||||| ||||||||   ||||||| || ||||||||    |||||| ||||||| ||||||||||||||||||||||||    
T  43925567 agaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaag 43925468  T
Q  101 caacttg 107  Q
    |||||||    
T  43925467 caacttg 43925461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 19914794 - 19914862
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| |||||||||| ||  |||||| ||||||| |||||||||||||||||||||||||||||||    
T  19914794 aatcgaacccagtattccttaggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 19914862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10047930 - 10048036
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||| |||||||| | |||||||| ||||||||   ||||||| || ||||||||   ||||||| ||||||| ||||||||||||||||||  ||||    
T  10047930 agaggcctgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagttcaag 10048029  T
Q  101 caacttg 107  Q
    |||||||    
T  10048030 caacttg 10048036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21530803 - 21530697
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||| |||||   |||||||| ||||||||   |||| || ||||||||||| |  |||||| ||||||| |||||||||||||||||||| |||    
T  21530803 agaggcatgtgcactgaccaagtgttgttccccctgggaatcaaacccagtattccccaggtacgtccttggaaggagctccttgccactggagccgaag 21530704  T
Q  101 caacttg 107  Q
    |||||||    
T  21530703 caacttg 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 43346833 - 43346939
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||  | |||||||| |||||| | | ||| ||| || |||||||| | ||||||| ||||||| |||||||||||||||||| ||||     
T  43346833 agaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccggtattccccagatacgtctttggaaggagctccttgccactggagtccaaa 43346932  T
Q  101 caacttg 107  Q
    |||||||    
T  43346933 caacttg 43346939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 47341931 - 47341825
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   |||||||  | ||||||||    |||||| ||||||  ||||||||||||||||||||||||    
T  47341931 agaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccactggagcccaag 47341832  T
Q  101 caacttg 107  Q
    |||||||    
T  47341831 caacttg 47341825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 22268088 - 22268189
Alignment:
Q  6 catgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaact 105  Q
    |||||||||| | ||| |||| ||||||||   ||||||| || |||||||| || |||||| ||||||  ||||||||||||||||||||||| |||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaact 22268187  T
Q  106 tg 107  Q
    ||    
T  22268188 tg 22268189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 4706065 - 4706141
Alignment:
Q  28 ttccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaac 104  Q
    |||||||||||||||||| |  ||||| |||| ||||||||||||||| ||||||||||||| |||| |||| ||||    
T  4706065 ttccccctaaaaatcgaaccatgtatttcctagatacgtcattggaaggagctccttgccaccggagtccaaacaac 4706141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 11607148 - 11607080
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||||||  |||||||  |||||||| ||||||| || ||||||||||||||||||||||||||||    
T  11607148 aatcgaatccgatattccccgaatacgtccttggaaggagttccttgccactggagcccaagcaacttg 11607080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 22573865 - 22573762
Alignment:
Q  3 aggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagca 102  Q
    ||||||||||||| ||||| |||| |||||| | ||||||||| ||  |||||||  ||||  || |||||||||||| ||||| |||||||||||||||    
T  22573865 aggcatgcgcactggtcaaatgttgttcccc-tgaaaatcgaacccgatattcccccaatatatctttggaagaagcttcttgctactggagcccaagca 22573767  T
Q  103 acttg 107  Q
    |||||    
T  22573766 acttg 22573762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 1797455 - 1797409
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  1797455 atacgtccttggaaggagctccttgccactggagcccaagcaacttg 1797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 13095913 - 13095807
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||   ||| ||| || ||||||||    |||||| ||| ||| ||||||||||||| ||||||||||    
T  13095913 agaggcatgcgcactggccaagtgttgttccccctgggaatagaacccggtattccccgggtacgtccttgaaaggagctccttgccacgggagcccaag 13095814  T
Q  101 caacttg 107  Q
    |||||||    
T  13095813 caacttg 13095807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16802178 - 16802072
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||| |||||| | |||  ||| |||| ||||| |||||||||| ||||||||    |||||| ||||||| ||||| |||||||||||||||| |    
T  16802178 agaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggtattccccgggtacgtccttggaaggagctcattgccactggagcccagg 16802079  T
Q  101 caacttg 107  Q
    |||||||    
T  16802078 caacttg 16802072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34659281 - 34659175
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||||| ||| |||||| | | ||||||| || ||||||||    ||| ||  |||||| |||||||||||||||||||||||     
T  34659281 agaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacatccctggaaggagctccttgccactggagcccaaa 34659182  T
Q  101 caacttg 107  Q
    |||||||    
T  34659181 caacttg 34659175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5069869 - 5069975
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| ||||||  ||| ||| |||| |||  |||||||| || ||||| ||    |||||| || ||||||||||||||||||||||||||||     
T  5069869 agaggcatgcacactagctaagcgttgttcctcctggaaatcgaacccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaa 5069968  T
Q  101 caacttg 107  Q
    |||||||    
T  5069969 caacttg 5069975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36619308 - 36619406
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaa 99  Q
    |||||||||| |||| | |||||||| ||||||||   ||||||| || |||||||| ||||||||| ||| ||| || ||||||||||| ||| ||||    
T  36619308 agaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatacgtccttgcaaggagttccttgccactagagtccaa 36619406  T

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Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 43862026 - 43862132
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||  ||| ||||||||   ||||||| || |||||||| | ||||||| ||||||  ||||||||||| || ||||||||     
T  43862026 agaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgtctttggaaagagctccttgccgctagagcccaaa 43862125  T
Q  101 caacttg 107  Q
    |||||||    
T  43862126 caacttg 43862132  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 22993482 - 22993527
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||    
T  22993482 tacgtccttggaaggagctccttgccactggagtccaagcaacttg 22993527  T

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Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 5039490 - 5039578
Alignment:
Q  19 caagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||||| |||| ||||  |||||||  | ||||||||  ||||| ||  |||||| ||||||||||||||||||||||| |||||||    
T  5039490 caagtgttgttcctcctaggaatcgaactcggtattccccgaatacatctatggaaggagctccttgccactggagcccaaacaacttg 5039578  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24969380 - 24969485
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||| ||||||| | |||||||| |||||  |  |||||||| || |||||  | | ||||||| ||| || ||||||||||||||||||||||||     
T  24969380 agaggcacgcgcactggccaagtgttgttccc--tggaaatcgaacccggtattttccagatacgtccttgaaaaaagctccttgccactggagcccaaa 24969477  T
Q  101 caacttgc 108  Q
    ||||||||    
T  24969478 caacttgc 24969485  T

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Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 4228865 - 4228911
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| ||||||||||| ||||||||||| |||||||    
T  4228865 atacgtccttggaaggagctccttgccgctggagcccaaacaacttg 4228911  T

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Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27028334 - 27028228
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||||||| ||||||||  |||||||| |  ||||| || |  |||||  ||||||  ||||||||||||| |||| ||||     
T  27028334 agaggcatgcgcactggccaagtgttgttccccctggaaatcgaacctggtatttcccaggtacgttcttggaatgagctccttgccaccggagtccaaa 27028235  T
Q  101 caacttg 107  Q
    |||||||    
T  27028234 caacttg 27028228  T

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Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 34127735 - 34127780
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| || ||||||||| ||||||||||||||||||    
T  34127735 tacgtccttggaaggagttccttgccattggagcccaagcaacttg 34127780  T

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Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 45447964 - 45447919
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||| || |||||||||||||    
T  45447964 tacgtccttggaaggagctccttgccactagaacccaagcaacttg 45447919  T

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Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 9685775 - 9685691
Alignment:
Q  20 aagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaac 104  Q
    ||||||| |||| ||| | ||||||| ||  |||||||   ||||||  ||||||| ||||||||||||||||||||||| ||||    
T  9685775 aagtgttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 9685691  T

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Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 625 - 519
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| ||||  ||||||||| ||||||||   ||||||| || ||||||||    |||||| ||||||| |||||||||||||| |||||||||    
T  625 agaggcatgcacactgatcaagtgttgttccccctgcgaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaag 526  T
Q  101 caacttg 107  Q
    |||||||    
T  525 caacttg 519  T

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Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 319477 - 319382
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcc 96  Q
    ||||| ||||||||| | |||| ||| ||||||||| ||||| || || ||||||||   ||||||| ||||||| ||||||||||||||||||||    
T  319477 agagggatgcgcactggccaagcgttgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggagcc 319382  T

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Target: scaffold0170 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9900 - 9794
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| | |||| ||| ||||||||  ||||||||||| |||||||  | |||| || ||||||| ||||||||| |||||||| | ||     
T  9900 agaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattcctcagatacatccttggaaggagctccttgtcactggagtcaaaa 9801  T
Q  101 caacttg 107  Q
    |||||||    
T  9800 caacttg 9794  T

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Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41099 - 40993
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| ||||   |||||||| |||||| | | ||||||| ||  |||||||| | ||||||  |||||| |||||||||||||||||||||||     
T  41099 agaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgatattccctgagtacgtccatggaaggagctccttgccactggagcccaaa 41000  T
Q  101 caacttg 107  Q
    |||||||    
T  40999 caacttg 40993  T

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Target: scaffold0316 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1668 - 1774
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |  ||  ||| ||||||||  |||||||| |  |||||||| |   ||||||||||||| |||||||||||||| ||| |||||    
T  1668 agaggcatgcgcactggctaatcgttgttccccctggaaatcgaacctggtattccccaggcacgtcattggaaggagctccttgccacttgagtccaag 1767  T
Q  101 caacttg 107  Q
    |||||||    
T  1768 caacttg 1774  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 8824 - 8870
Alignment:
Q  61 atacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  8824 atacgtccttggaaggagctccttgccactggagcccaaacaacttg 8870  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 250128 - 250173
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||    
T  250128 tacgtccttggaatgagctccttgccactggagcccaagcaacttg 250173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 271189 - 271234
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||  ||||||||||||||||    
T  271189 tacgtccttggaaggagctccttgccaccagagcccaagcaacttg 271234  T

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Target: scaffold0209 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12628 - 12524
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    ||||||||||||||| |||||| ||| |||||  ||  ||||||| || ||||| |   | |||||| ||||||| |||||||||||||| ||||||||     
T  12628 agaggcatgcgcactggtcaagcgttgttccc--taggaatcgaacccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaa 12531  T
Q  101 caacttg 107  Q
    |||||||    
T  12530 caacttg 12524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 72686 - 72604
Alignment:
Q  2 gaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttg 85  Q
    |||||||||||||| |||||| ||| |||||| |  |||||||| || |||||||||  ||||||| ||||||| |||||||||    
T  72686 gaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggtattccct-gatacgtccttggaaggagctccttg 72604  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26238 - 26132
Alignment:
Q  1 agaggcatgcgcactagtcaagtgttattccccctaaaaatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaag 100  Q
    |||||||||| |||| | |||| ||| ||||||||  |||||||| ||||||||||| |  || ||| || |||| || | ||||||||| ||| |||||    
T  26238 agaggcatgcacactggccaagcgttgttccccctggaaatcgaacccagtattccccaggtatgtccttagaaggagtttcttgccactagagtccaag 26139  T
Q  101 caacttg 107  Q
    |||||||    
T  26138 caacttg 26132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 68511 - 68466
Alignment:
Q  62 tacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    |||||| ||||||| |||||||||||||| |||||||| |||||||    
T  68511 tacgtccttggaaggagctccttgccactagagcccaaacaacttg 68466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 9453 - 9385
Alignment:
Q  39 aatcgaatccagtattccctaaatacgtcattggaagaagctccttgccactggagcccaagcaacttg 107  Q
    ||||||| || |||||||| || |||||| ||| ||| |||||||||  || |||||||||||||||||    
T  9453 aatcgaacccggtattccccaagtacgtccttgaaaggagctccttgttaccggagcccaagcaacttg 9385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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