View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4651-Insertion-4 (Length: 604)
Name: NF4651-Insertion-4
Description: NF4651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4651-Insertion-4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 558; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 558; E-Value: 0
Query Start/End: Original strand, 10 - 604
Target Start/End: Original strand, 5798721 - 5799317
Alignment:
| Q |
10 |
atactgaattgtatatatatacac--acactagattaatcaacaagacagtagggatattaaggaatatcattgcttataatgcttgttgaaccccatag |
107 |
Q |
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| T |
5798721 |
atactgaattgtatatacatacacacacactagattaatcaacaagacagtagggatattaaggaatatcattgcttataatgcttgttgaaccccatag |
5798820 |
T |
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| Q |
108 |
tctatgttgaattaatgaagctatagaaaaggaaatatgttgataaaccaaataagatataaaaaagagacctggtttaaaaagtctatatgatctatca |
207 |
Q |
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| T |
5798821 |
tctatgttgaattaatgcagctatagaaaaggaaatatgttgataaaccaaataagatataaaaaagagacctggtttaaaaagtctatatgatctatca |
5798920 |
T |
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| Q |
208 |
aatatacacacaaagtccgttacatgatctctcaaatattgacagagaaaccaacaaactaaaactcccaaccttcttaacaaaaaagagagagggttga |
307 |
Q |
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| T |
5798921 |
aatatacacacaaagtccgttacatgatctctcaaatattgacagagaaaccaacaaactaaaactcccaaccttcttaacaaaaaagagagagggttga |
5799020 |
T |
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| Q |
308 |
gatcgttaagggatagcatatgctataggtgcttttgttttgttttgtatggtgattcttttgccccctcctcccatgtacctataccagtcttagtgtt |
407 |
Q |
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| T |
5799021 |
gatcattaagggatagcatatgctataggtgcttttgttttgttttgtatggtgattcttttgccctcttctcccatgtacctataccagtcttagtgtt |
5799120 |
T |
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| Q |
408 |
aggagtattggtattggtgtttgaatgaaagaataggcaaactgcagagcaatcatcaggcttagatggaaccttagtcttccatgcttgaacagctgcc |
507 |
Q |
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| T |
5799121 |
aggagtattggtattggtgtttgaatgaaagaataggcaaactgcagagcaatcatcaggtttagatggaatcttagtcttccatgcttgaacagctgcc |
5799220 |
T |
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| Q |
508 |
tcaacaactagtttagcagccgaagatcgtggagcagatgccacaatgttcacaacttgattgttggataaaacatcccaaaccccatctgtggcta |
604 |
Q |
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| T |
5799221 |
tcaacaactagtttagcagccgaagatcgtggagcagatgccacaatgttcacaacttgattgttggataaaacatcccaaaccccatctgtggcta |
5799317 |
T |
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Target: chr7 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 589
Target Start/End: Original strand, 6833042 - 6833134
Alignment:
| Q |
497 |
gaacagctgcctcaacaactagtttagcagccgaagatcgtggagcagatgccacaatgttcacaacttgattgttggataaaacatcccaaa |
589 |
Q |
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| T |
6833042 |
gaacagctgactcaaccagtaatctagcagcagtagaccgcggtgcagatgccacaatctccacaacttcttcgtttgataaaacatcccaaa |
6833134 |
T |
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