View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4651_high_2 (Length: 465)
Name: NF4651_high_2
Description: NF4651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4651_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 440; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 7 - 450
Target Start/End: Complemental strand, 6009808 - 6009365
Alignment:
| Q |
7 |
gaagcaaaggtgaattagtcacataatcaacaaaattattcaataaacactaaccaaatgtggccatggaactgacgcatatatcgtaacggagtgcacc |
106 |
Q |
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| T |
6009808 |
gaagcaaaggtgaattagtcacataatcaacaaaattattcaataaacactaaccaaatgtggccatggaactgacgcatatatcgtaacggagtgcacc |
6009709 |
T |
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| Q |
107 |
ataagcgattcgaaggcgcaaattagctaccagagcatcgagtttcccagtccgtttttgtaccaacattcctcctggtctcatttcccattggtattct |
206 |
Q |
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| T |
6009708 |
ataagcgattcgaaggcgcaaattagctaccagagcatcgagtttcccagtccgtttttgtaccaacattcctcctggtctcatttcccattggtattct |
6009609 |
T |
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| Q |
207 |
tcttgttctcttttgtgagacgacatggtttctcttgtaccacgactttcactgttagcgttcagcttcttcttcatcattttgaactatgttttctagc |
306 |
Q |
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| T |
6009608 |
tcttgttctcttttgtgagacgacatggtttctcttgtaccacgactttcactgttagcgttcagcttcttcttcatcattttgaactatgttttctagc |
6009509 |
T |
|
| Q |
307 |
aaaacgagggaaaatatctaagacaagaaactttgtaccgacagaattcagaaacaggttgtaatgtttggttcttgtggtgttttatatactaccactc |
406 |
Q |
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| T |
6009508 |
aaaacgagggaaaatatctaagacaagaaactttgtaccgacagaattcagaaacaggttgtaatgtttggttcttgtggtgttttatatactaccactc |
6009409 |
T |
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| Q |
407 |
tctttaattcataaacgcttttgaatgacttgacatgtagtaaa |
450 |
Q |
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| T |
6009408 |
tctttaattcataaacgcttttgaatgatttgacatgtagtaaa |
6009365 |
T |
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