View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4652-Insertion-4 (Length: 604)

Name: NF4652-Insertion-4
Description: NF4652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4652-Insertion-4
NF4652-Insertion-4
[»] chr8 (37 HSPs)
chr8 (8-604)||(5266388-5266979)
chr8 (136-194)||(9209886-9209944)
chr8 (135-197)||(18957883-18957945)
chr8 (133-194)||(43489893-43489954)
chr8 (133-197)||(42304792-42304856)
chr8 (135-197)||(4030493-4030555)
chr8 (136-194)||(4302163-4302221)
chr8 (136-194)||(4656052-4656110)
chr8 (136-194)||(7149010-7149068)
chr8 (136-194)||(9458483-9458541)
chr8 (136-194)||(10795427-10795485)
chr8 (135-197)||(14781297-14781359)
chr8 (135-197)||(16365260-16365322)
chr8 (135-197)||(18305126-18305188)
chr8 (135-197)||(19717030-19717092)
chr8 (135-197)||(20831129-20831191)
chr8 (136-194)||(39371217-39371275)
chr8 (135-193)||(40012348-40012406)
chr8 (136-194)||(40264327-40264385)
chr8 (135-197)||(44724946-44725008)
chr8 (136-193)||(2113764-2113821)
chr8 (133-194)||(43604427-43604488)
chr8 (133-193)||(41964650-41964710)
chr8 (142-193)||(14062474-14062525)
chr8 (135-197)||(7467390-7467452)
chr8 (135-197)||(31626283-31626345)
chr8 (135-193)||(35143061-35143119)
chr8 (135-197)||(39466683-39466745)
chr8 (136-194)||(41385922-41385980)
chr8 (136-194)||(42275920-42275978)
chr8 (142-194)||(1605852-1605904)
chr8 (133-181)||(34134739-34134787)
chr8 (142-197)||(43307703-43307758)
chr8 (135-197)||(32498874-32498936)
chr8 (133-189)||(10294564-10294620)
chr8 (135-197)||(37857861-37857921)
chr8 (142-194)||(28620666-28620718)
[»] scaffold0054 (1 HSPs)
scaffold0054 (135-197)||(36450-36512)
[»] chr7 (36 HSPs)
chr7 (136-194)||(27417700-27417758)
chr7 (135-198)||(3023908-3023971)
chr7 (135-197)||(510629-510691)
chr7 (136-194)||(12252438-12252496)
chr7 (135-197)||(12741356-12741418)
chr7 (135-197)||(23102274-23102336)
chr7 (135-197)||(28343293-28343355)
chr7 (135-197)||(29893939-29894001)
chr7 (136-194)||(43056740-43056798)
chr7 (136-197)||(29613954-29614015)
chr7 (137-194)||(47912576-47912633)
chr7 (136-194)||(152837-152895)
chr7 (135-197)||(7994139-7994201)
chr7 (135-197)||(9881449-9881511)
chr7 (142-200)||(12893156-12893214)
chr7 (135-197)||(18839277-18839339)
chr7 (144-194)||(30111777-30111827)
chr7 (135-197)||(32884736-32884798)
chr7 (136-194)||(35089149-35089207)
chr7 (135-192)||(33891401-33891458)
chr7 (145-197)||(28034289-28034341)
chr7 (145-197)||(30823580-30823632)
chr7 (142-194)||(34114593-34114645)
chr7 (133-197)||(37971555-37971619)
chr7 (142-194)||(42677299-42677351)
chr7 (142-198)||(46035498-46035554)
chr7 (142-192)||(26183084-26183134)
chr7 (136-194)||(33475513-33475571)
chr7 (135-197)||(37328809-37328871)
chr7 (135-197)||(39785079-39785141)
chr7 (137-192)||(33383626-33383681)
chr7 (133-192)||(44255946-44256005)
chr7 (135-194)||(48136414-48136473)
chr7 (136-194)||(40098230-40098288)
chr7 (134-197)||(40459883-40459945)
chr7 (145-193)||(46197158-46197206)
[»] chr3 (46 HSPs)
chr3 (135-197)||(52617136-52617198)
chr3 (133-194)||(23367390-23367451)
chr3 (135-200)||(39039059-39039124)
chr3 (135-197)||(18750616-18750678)
chr3 (136-194)||(23360553-23360611)
chr3 (135-197)||(23752553-23752615)
chr3 (136-194)||(24149889-24149947)
chr3 (136-194)||(26556843-26556901)
chr3 (136-194)||(30589821-30589879)
chr3 (135-197)||(31645413-31645475)
chr3 (135-197)||(34483254-34483316)
chr3 (136-194)||(36054062-36054120)
chr3 (135-197)||(36673309-36673371)
chr3 (135-197)||(44905006-44905068)
chr3 (135-197)||(45254604-45254666)
chr3 (136-194)||(46223358-46223416)
chr3 (135-200)||(17947201-17947266)
chr3 (136-193)||(34290220-34290277)
chr3 (135-196)||(52811364-52811425)
chr3 (142-194)||(45214136-45214188)
chr3 (136-191)||(2124760-2124815)
chr3 (142-197)||(50902471-50902526)
chr3 (135-197)||(10728176-10728238)
chr3 (135-197)||(11432530-11432592)
chr3 (144-194)||(14978528-14978578)
chr3 (136-194)||(19551205-19551263)
chr3 (136-194)||(23697947-23698005)
chr3 (136-194)||(23716402-23716460)
chr3 (136-194)||(23734858-23734916)
chr3 (135-197)||(39841605-39841667)
chr3 (136-194)||(44040953-44041011)
chr3 (135-197)||(50761273-50761335)
chr3 (136-194)||(50899498-50899556)
chr3 (135-193)||(50902514-50902572)
chr3 (135-197)||(51736917-51736979)
chr3 (135-197)||(54629833-54629895)
chr3 (135-200)||(48380123-48380188)
chr3 (135-194)||(24573485-24573544)
chr3 (136-191)||(38628875-38628930)
chr3 (142-197)||(44707927-44707982)
chr3 (135-197)||(10661170-10661232)
chr3 (144-194)||(23754529-23754579)
chr3 (136-194)||(26292616-26292673)
chr3 (142-194)||(36786901-36786950)
chr3 (136-197)||(20833882-20833943)
chr3 (142-194)||(46251251-46251303)
[»] chr2 (25 HSPs)
chr2 (136-194)||(38821303-38821361)
chr2 (133-194)||(7487009-7487070)
chr2 (135-197)||(13832718-13832780)
chr2 (135-197)||(18178255-18178317)
chr2 (136-194)||(20156633-20156691)
chr2 (135-197)||(25289138-25289200)
chr2 (135-197)||(26789768-26789830)
chr2 (136-194)||(29941865-29941923)
chr2 (133-197)||(3464568-3464632)
chr2 (142-197)||(43079473-43079528)
chr2 (144-194)||(6288608-6288658)
chr2 (135-197)||(28845561-28845623)
chr2 (135-197)||(33136577-33136639)
chr2 (136-194)||(34027829-34027887)
chr2 (136-194)||(45547891-45547949)
chr2 (136-197)||(7027889-7027950)
chr2 (142-194)||(2289266-2289318)
chr2 (145-200)||(10658423-10658478)
chr2 (142-194)||(27979879-27979931)
chr2 (142-194)||(28066409-28066461)
chr2 (136-194)||(36599197-36599255)
chr2 (142-192)||(45497494-45497544)
chr2 (142-192)||(45505236-45505286)
chr2 (135-192)||(28739186-28739243)
chr2 (142-194)||(43023508-43023560)
[»] chr1 (28 HSPs)
chr1 (135-197)||(28386608-28386670)
chr1 (133-194)||(51826013-51826074)
chr1 (133-193)||(39758856-39758916)
chr1 (133-193)||(39764210-39764270)
chr1 (135-198)||(45273544-45273607)
chr1 (136-194)||(1923421-1923479)
chr1 (135-197)||(6313559-6313621)
chr1 (135-197)||(9321669-9321731)
chr1 (136-194)||(14389398-14389456)
chr1 (135-197)||(20111731-20111793)
chr1 (135-197)||(25613075-25613137)
chr1 (135-197)||(29220095-29220157)
chr1 (135-197)||(29395587-29395649)
chr1 (135-197)||(51702577-51702639)
chr1 (136-194)||(52706364-52706422)
chr1 (136-193)||(28038388-28038445)
chr1 (142-197)||(48198937-48198992)
chr1 (142-197)||(48207520-48207575)
chr1 (135-197)||(5494307-5494369)
chr1 (144-194)||(19894808-19894858)
chr1 (136-194)||(26881868-26881926)
chr1 (136-194)||(45319451-45319509)
chr1 (135-197)||(49231967-49232029)
chr1 (135-198)||(46328949-46329012)
chr1 (136-194)||(45535733-45535791)
chr1 (133-191)||(4289865-4289923)
chr1 (135-197)||(38535306-38535368)
chr1 (135-197)||(38557524-38557586)
[»] chr6 (15 HSPs)
chr6 (135-200)||(4199634-4199699)
chr6 (144-195)||(10262853-10262904)
chr6 (136-194)||(3109402-3109460)
chr6 (136-194)||(6475795-6475853)
chr6 (135-197)||(14261600-14261662)
chr6 (136-194)||(29864804-29864862)
chr6 (135-197)||(30384221-30384283)
chr6 (142-193)||(5958037-5958088)
chr6 (142-197)||(7104514-7104569)
chr6 (142-197)||(8790061-8790116)
chr6 (142-197)||(27585234-27585289)
chr6 (135-197)||(7498073-7498135)
chr6 (135-197)||(31068403-31068465)
chr6 (135-197)||(31896620-31896682)
chr6 (135-197)||(34774368-34774430)
[»] scaffold0237 (1 HSPs)
scaffold0237 (136-194)||(20499-20557)
[»] scaffold0153 (1 HSPs)
scaffold0153 (136-194)||(33877-33935)
[»] scaffold0016 (1 HSPs)
scaffold0016 (136-194)||(80845-80903)
[»] chr5 (20 HSPs)
chr5 (135-197)||(1459345-1459407)
chr5 (136-194)||(10553712-10553770)
chr5 (135-197)||(13717078-13717140)
chr5 (135-197)||(13999264-13999326)
chr5 (135-197)||(40012867-40012929)
chr5 (136-194)||(40411393-40411451)
chr5 (135-197)||(1151449-1151511)
chr5 (136-194)||(3603512-3603570)
chr5 (135-197)||(4239630-4239692)
chr5 (135-197)||(4549415-4549477)
chr5 (135-197)||(7947183-7947245)
chr5 (144-194)||(10553491-10553541)
chr5 (144-194)||(11632738-11632788)
chr5 (135-197)||(13926915-13926977)
chr5 (136-194)||(13949853-13949911)
chr5 (135-193)||(39853335-39853393)
chr5 (136-191)||(17519493-17519548)
chr5 (135-200)||(5950101-5950166)
chr5 (142-194)||(2275321-2275373)
chr5 (133-190)||(32827897-32827954)
[»] chr4 (30 HSPs)
chr4 (136-194)||(8583053-8583111)
chr4 (135-197)||(27769047-27769109)
chr4 (135-197)||(32683184-32683246)
chr4 (135-197)||(54342130-54342192)
chr4 (133-194)||(7808971-7809032)
chr4 (133-197)||(49834022-49834086)
chr4 (135-197)||(5442376-5442436)
chr4 (136-194)||(3434879-3434937)
chr4 (135-193)||(5801688-5801746)
chr4 (136-194)||(7820925-7820983)
chr4 (135-197)||(23988180-23988242)
chr4 (135-197)||(29649179-29649241)
chr4 (135-197)||(32323052-32323114)
chr4 (144-194)||(42315866-42315916)
chr4 (135-197)||(48262058-48262120)
chr4 (135-197)||(50019174-50019236)
chr4 (142-197)||(38234593-38234648)
chr4 (142-193)||(53272829-53272880)
chr4 (136-194)||(16654157-16654215)
chr4 (135-197)||(30966234-30966296)
chr4 (135-197)||(37827585-37827647)
chr4 (135-197)||(41726089-41726151)
chr4 (136-194)||(42217500-42217557)
chr4 (135-197)||(48531970-48532032)
chr4 (135-197)||(49500689-49500751)
chr4 (135-197)||(51321839-51321901)
chr4 (135-196)||(28484855-28484916)
chr4 (142-194)||(52110242-52110294)
chr4 (136-197)||(37916776-37916842)
chr4 (148-194)||(44647710-44647756)
[»] scaffold0042 (1 HSPs)
scaffold0042 (135-196)||(57220-57281)
[»] scaffold0472 (1 HSPs)
scaffold0472 (142-194)||(990-1042)
[»] scaffold0940 (1 HSPs)
scaffold0940 (135-197)||(3623-3685)
[»] scaffold0839 (1 HSPs)
scaffold0839 (135-197)||(3163-3225)
[»] scaffold1521 (1 HSPs)
scaffold1521 (135-200)||(1339-1404)
[»] scaffold0383 (1 HSPs)
scaffold0383 (135-200)||(16194-16259)
[»] scaffold0152 (2 HSPs)
scaffold0152 (135-200)||(20421-20486)
scaffold0152 (135-200)||(29315-29380)
[»] scaffold0110 (1 HSPs)
scaffold0110 (135-198)||(38796-38864)


Alignment Details
Target: chr8 (Bit Score: 430; Significance: 0; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 8 - 604
Target Start/End: Complemental strand, 5266979 - 5266388
Alignment:
Q  8 gtatggtattcatgtctttactatgattagtcttcgtactttgacagcatccacttaacgtcttttggtcgaattaacccactagtttatatgaaaaaga 107  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  5266979 gtatggtattcatgtcttgactatgattagtcttcgtactttgacagcatccacataacgtcttttgatcgaattaacccactagtttatatgaaaaaga 5266880  T
Q  108 ctatgacactctacatagttataaatgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaagannnnnnn 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  5266879 ctatgacactctacatagttataaatgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaagattttttt 5266780  T
Q  208 nngctgaaataaattttttaaatcataatccaatacattcccttaactannnnnnngaacgatgtggatttccgagttgaaatgataaattcgtcatatg 307  Q
      |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||| |||||    
T  5266779 t-gctgaaataaattttttaaatcataatccaatacattcccttaactatttttttgaacgatgtggatttccgagttgaaatgataaattcgttatatg 5266681  T
Q  308 aaccaaactactttgggtttgaatgtgttggttttgattggacctaaattaaatagattcggttacccatagatttaagtgatcaagatttgaagatact 407  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| | ||||||| |||||||||| |||||    
T  5266680 aaccaaactactttgggtttgaatgtgttggtttttattggacctaaattaaatacattcggtcacccatagactcaagtgatgaagatttgaaaatact 5266581  T
Q  408 tgattggtttgagtttagctaatacttgtcatttaaaaaatagacaaataaccattttcgctcataaatatataacgagtaaacagtaattcatgtcaaa 507  Q
    |||||||||||| ||||||||| |||||||||||||||||||| |||||||  ||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  5266580 tgattggtttgattttagctaacacttgtcatttaaaaaataggcaaataattattttcgttcataaatgtataacgagtaaacaataattcatgtcaaa 5266481  T
Q  508 atttcagaagagtcctaagattgcataattcattaaacaaaatagtcattgcaattaaaatactctaataatactatcatataagtcttttaatata 604  Q
    |||||| |  ||||||||||||||   |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  5266480 atttcaaagcagtcctaagattgc---attcattaaacaaaatagtcattgaaatt-aaatactctaataatactatcatataagtcttttaatata 5266388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 9209886 - 9209944
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  9209886 aaaaagtcttttaaaatccaacaaaatcaatataatctcacaaaatcttttaaaatctt 9209944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 18957945 - 18957883
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    ||||||||||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  18957945 taaaaattcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 18957883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 43489893 - 43489954
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  43489893 tgtaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 43489954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 42304856 - 42304792
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||| ||| |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  42304856 tgtataaagtcttttaaaatctcacaaaatcaatacaatctcacacagtcttttaaaatcttaaa 42304792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 4030555 - 4030493
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  4030555 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 4030493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 4302221 - 4302163
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||| ||||||||||||||    
T  4302221 aaaaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcttttaaaatctt 4302163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 4656052 - 4656110
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  4656052 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 4656110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 7149010 - 7149068
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  7149010 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 7149068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 9458483 - 9458541
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  9458483 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 9458541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 10795485 - 10795427
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  10795485 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 10795427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 14781359 - 14781297
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  14781359 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 14781297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 16365260 - 16365322
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  16365260 taaaaagtcttttaaaatctcacagaatcaatacaatcgcacaaagtcttttaaaatcttaaa 16365322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 18305188 - 18305126
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  18305188 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 18305126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 19717092 - 19717030
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  19717092 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 19717030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 20831191 - 20831129
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  20831191 taaaaaatcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 20831129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 39371275 - 39371217
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  39371275 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 39371217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 40012406 - 40012348
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||| |||||||||||||    
T  40012406 taaaaattcttttaaaatctcacaaaatcgatacaatctcacaaactcttttaaaatct 40012348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 40264385 - 40264327
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  40264385 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 40264327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 44725008 - 44724946
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  44725008 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 44724946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 2113764 - 2113821
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    ||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  2113764 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatct 2113821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 43604488 - 43604427
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||| | |||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  43604488 tgtaaaaagttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 43604427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 41964710 - 41964650
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    |||||||| ||||||||||||||||||||||||||||||   ||||||| |||||||||||    
T  41964710 tgtaaaaagtcttttaaaatcccacaaaatcaatataattcaacaaagttttttaaaatct 41964650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 14062474 - 14062525
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  14062474 tcttttaaaatcccataaaatcaatagaatcacacaaagtcttttaaaatct 14062525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 7467390 - 7467452
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| ||||||||| || |||| |||||||| ||||||||| |||||||||||||||||||    
T  7467390 taaaaagtcttttaaattctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 7467452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 31626283 - 31626345
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| | |||||||||||||||||    
T  31626283 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 31626345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 35143061 - 35143119
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    |||||| |||||||||||| ||||||||||||| ||||| ||| |||||||||||||||    
T  35143061 taaaaagtcttttaaaatctcacaaaatcaatacaatcttacagagtcttttaaaatct 35143119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 39466745 - 39466683
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||| ||||| |||||||||||||||||||    
T  39466745 taaaaagtcttttaaaatctcacagaatcaatacaatatcacagagtcttttaaaatcttaaa 39466683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 41385980 - 41385922
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  41385980 aaaaagtcttttaaaatcccacaaaattaatacaatccaacaaagtcttttaaaatctt 41385922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 42275920 - 42275978
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||| |||||||||||||| ||||  ||||||||||||||||||||    
T  42275920 aaaaagtcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatctt 42275978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 1605904 - 1605852
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||||||||||||||| ||||   |||||||||||||||||||    
T  1605904 tcttttaaaatcccacaaaatcaatacaatcctgcaaagtcttttaaaatctt 1605852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 34134787 - 34134739
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagt 181  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||    
T  34134787 tgtaaaaagtcttttaaaatctcataaaatcaatataatctcacaaagt 34134739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 43307758 - 43307703
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||||||||| |||| |||||||  ||||||||| |||||||||||||||||||    
T  43307758 tcttttaaaatctcacagaatcaatccaatctcacacagtcttttaaaatcttaaa 43307703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 32498874 - 32498936
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |  | |||||||| ||||||||| |||||||||||||||||||    
T  32498874 taaaaagtcttttaaaatctcttagaatcaatacaatctcacacagtcttttaaaatcttaaa 32498936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 10294620 - 10294564
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaa 189  Q
    |||| ||| |||||||||||| |||| |||||||| ||||||||| |||||||||||    
T  10294620 tgtataaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaa 10294564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 37857861 - 37857921
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| |||||  || |||||||||||||||||||    
T  37857861 taaaaagtcttttaaaatctcacagaatcaatacaatct--catagtcttttaaaatcttaaa 37857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 28620666 - 28620718
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||| || |||||||||| |||| |||||| | ||||||||||||    
T  28620666 tcttttaaaatctcaaaaaatcaatacaatcacacaaaattttttaaaatctt 28620718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 36512 - 36450
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  36512 taaaaagtcttttaaaatctcacagaatcaatataatctcacacagtcttttaaaatcttaaa 36450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 27417758 - 27417700
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  27417758 aaaaagtcttttaaaatcccacaaaatcaatacaatctaacaaagtcttttaaaatctt 27417700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 3023908 - 3023971
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaa 198  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||||||||||    
T  3023908 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaa 3023971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 510629 - 510691
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  510629 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 510691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 12252496 - 12252438
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  12252496 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 12252438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 12741356 - 12741418
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  12741356 taaaaagtcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaa 12741418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 23102274 - 23102336
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  23102274 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 23102336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 28343293 - 28343355
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  28343293 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 28343355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 29893939 - 29894001
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| ||||||||||||| ||||||||| | |||||||||||||||||    
T  29893939 taaaaagtcttttaaaatctcacaaaatcaatacaatctcacacaatcttttaaaatcttaaa 29894001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 43056798 - 43056740
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  43056798 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 43056740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 29614015 - 29613954
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    ||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  29614015 aaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 29613954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 47912633 - 47912576
Alignment:
Q  137 aaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  47912633 aaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 47912576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 152837 - 152895
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||||| |||||||||||| ||||  ||||||||||||||||||||    
T  152837 aaaaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatctt 152895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 7994139 - 7994201
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| ||||||||||||  ||| |||||||| ||||||||| |||||||||||||||||||    
T  7994139 taaaaagtcttttaaaatcttacagaatcaatacaatctcacacagtcttttaaaatcttaaa 7994201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 9881511 - 9881449
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| || | |||||||| ||||||||| |||||||||||||||||||    
T  9881511 taaaaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaa 9881449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 12893214 - 12893156
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    |||||||||||| || | |||||||| ||||||||||||||||||||||| ||||||||    
T  12893214 tcttttaaaatctcatagaatcaatacaatctcacaaagtcttttaaaattttaaaaga 12893156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 18839277 - 18839339
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| | |||||||||||||||||    
T  18839277 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 18839339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 30111777 - 30111827
Alignment:
Q  144 ttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  30111777 ttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 30111827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 32884736 - 32884798
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||| ||||| |||||||||||||||||||    
T  32884736 taaaaagtcttttaaaatctcacagaatcaatacaatttcacacagtcttttaaaatcttaaa 32884798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 35089207 - 35089149
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  35089207 aaaaagtcttttaaaatctcacaaaatcaatacaatccaacaaagtcttttaaaatctt 35089149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 33891458 - 33891401
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatc 192  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||||    
T  33891458 taaaaagtcttttaaaatctcacagaatcaatacaatctcacatagtcttttaaaatc 33891401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 28034341 - 28034289
Alignment:
Q  145 tttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||| |||||    
T  28034341 tttaaaatctcacaaaatcaatacaatctcacacagtcttttaaaattttaaa 28034289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 30823580 - 30823632
Alignment:
Q  145 tttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    ||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  30823580 tttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 30823632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 34114645 - 34114593
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||  ||||||||||| |||| |||||||||||||||||||||    
T  34114645 tcttttaaaatccttcaaaatcaatacaatcacacaaagtcttttaaaatctt 34114593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 37971619 - 37971555
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||| ||| |||||||||||| |||| |||||||| |||||||||  ||||||||||||||||||    
T  37971619 tgtataaagtcttttaaaatctcacagaatcaatacaatctcacacggtcttttaaaatcttaaa 37971555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 42677351 - 42677299
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||||||||| |||||||||||||| |||| |||||| ||||||||||||||    
T  42677351 tcttttaaaattccacaaaatcaatacaatcacacaaaatcttttaaaatctt 42677299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 46035554 - 46035498
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaa 198  Q
    |||||||||||| |||| |||||||| |||  |||||||||||||||||||||||||    
T  46035554 tcttttaaaatctcacagaatcaatacaattccacaaagtcttttaaaatcttaaaa 46035498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 26183084 - 26183134
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatc 192  Q
    |||||||||||| |||| |||||||| |||| |||||||||||||||||||    
T  26183084 tcttttaaaatctcacataatcaatacaatcccacaaagtcttttaaaatc 26183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 33475513 - 33475571
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||  ||||||||||||| ||||  ||||||||||||||||||||    
T  33475513 aaaaagtcttttaaaatttcacaaaatcaatacaatccaacaaagtcttttaaaatctt 33475571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 37328809 - 37328871
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||| ||| ||||||||||    
T  37328809 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtccttttaaatcttaaa 37328871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 39785079 - 39785141
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||  |||| |||||||| |||||| || |||||||||||||||||||    
T  39785079 taaaaagtcttttaaaatttcacagaatcaatacaatctcgcacagtcttttaaaatcttaaa 39785141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 33383626 - 33383681
Alignment:
Q  137 aaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatc 192  Q
    |||| |||||||||||| |||| |||||||| ||||| ||| ||||||||||||||    
T  33383626 aaaagtcttttaaaatctcacagaatcaatacaatcttacacagtcttttaaaatc 33383681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 44256005 - 44255946
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatc 192  Q
    |||| ||| |||||||||||| || | |||||||| ||||||||| ||||||||||||||    
T  44256005 tgtataaagtcttttaaaatctcagagaatcaatacaatctcacacagtcttttaaaatc 44255946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 48136473 - 48136414
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| | | ||||||||||||    
T  48136473 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatattttaaaatctt 48136414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 40098230 - 40098288
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||| | | ||| |||||||||||| ||||| ||||||||||||||    
T  40098230 aaaaagtcttttaaaattcaagaaagtcaatataatcttacaaaatcttttaaaatctt 40098288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 40459945 - 40459883
Alignment:
Q  134 gtaaaaattcttttaaaatcccacaaaatc-aatataatctcacaaagtcttttaaaatcttaaa 197  Q
    ||||||| |||||||||||| |||| |||| |||| ||||||||  |||||||||||||||||||    
T  40459945 gtaaaaagtcttttaaaatctcacagaatcaaatacaatctcac--agtcttttaaaatcttaaa 40459883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 46197206 - 46197158
Alignment:
Q  145 tttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    |||||||| | | |||||||||||||| ||| |||||||||||||||||    
T  46197206 tttaaaattctataaaatcaatataatttcataaagtcttttaaaatct 46197158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 52617198 - 52617136
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  52617198 taaaaagtcttttaaaatctcacagaatcaatacaatctcacaaagtcttttaaaatcttaaa 52617136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 23367390 - 23367451
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  23367390 tgtaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23367451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 39039059 - 39039124
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||| |||||||||||||||||    
T  39039059 taaaaagtcttttaaaatctcacagaatcaatacaatctcacaaagtcatttaaaatcttaaaaga 39039124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 18750616 - 18750678
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  18750616 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 18750678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 23360553 - 23360611
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  23360553 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23360611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 23752615 - 23752553
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  23752615 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 23752553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 24149947 - 24149889
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  24149947 aaaaagtcttttaaaatcccacaaaatcaatataatccaacaaagtcatttaaaatctt 24149889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 26556843 - 26556901
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  26556843 aaaaagtcttttaaaatcccacaaaatcaatacaatcgaacaaagtcttttaaaatctt 26556901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 30589821 - 30589879
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  30589821 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 30589879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 31645475 - 31645413
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  31645475 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 31645413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 34483316 - 34483254
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  34483316 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 34483254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 36054120 - 36054062
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  36054120 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 36054062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 36673371 - 36673309
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  36673371 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 36673309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 44905068 - 44905006
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  44905068 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 44905006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 45254666 - 45254604
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  45254666 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 45254604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 46223416 - 46223358
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  46223416 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 46223358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 17947201 - 17947266
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||| ||||||||    
T  17947201 taaaaagtcttttaaaatctcacagaatcaatacaatctcacatagtcttttaaaattttaaaaga 17947266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 34290277 - 34290220
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    ||||| ||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  34290277 aaaaagtcttttaaaatcccataaaatcaatacaatcacacaaagtcttttaaaatct 34290220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 52811364 - 52811425
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaa 196  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||||||||    
T  52811364 taaaaaatcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaa 52811425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 45214188 - 45214136
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  45214188 tcttttaaaatctcacaaaatcaatacaatcacacaaagtcttttaaaatctt 45214136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 2124815 - 2124760
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaat 191  Q
    ||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  2124815 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaat 2124760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 50902526 - 50902471
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  50902526 tcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 50902471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 10728238 - 10728176
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| | |||||||||||||||||    
T  10728238 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacattcttttaaaatcttaaa 10728176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 11432530 - 11432592
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||| |||||    
T  11432530 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaattttaaa 11432592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 14978528 - 14978578
Alignment:
Q  144 ttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  14978528 ttttaaaatccaacaaagtcaatataatcttacaaagtcttttaaaatctt 14978578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 19551263 - 19551205
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  | ||||||||||||||||||    
T  19551263 aaaaaatcttttaaaatcccacaaaatcaatacaatccaataaagtcttttaaaatctt 19551205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 23697947 - 23698005
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||| ||||||||||||||||||| ||||  ||||||||||||||||||||    
T  23697947 aaaaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23698005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 23716402 - 23716460
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||| ||||||||||||||||||| ||||  ||||||||||||||||||||    
T  23716402 aaaaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 23734858 - 23734916
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||| ||||||||||||||||||| ||||  ||||||||||||||||||||    
T  23734858 aaaaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23734916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 39841667 - 39841605
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| |||||| || |||||||||||||||||||    
T  39841667 taaaaagtcttttaaaatctcacataatcaatacaatctcgcacagtcttttaaaatcttaaa 39841605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 44041011 - 44040953
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||| |||||||| ||||||||||||||||||| |||| ||||||||||||||    
T  44041011 aaaaagtcttctaaaatccaacaaaatcaatataatctcgcaaaatcttttaaaatctt 44040953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 50761335 - 50761273
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| | |||||||||||||||||    
T  50761335 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 50761273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 50899556 - 50899498
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||||| |||||||||||| ||||  ||||||||||||||||||||    
T  50899556 aaaaagtcttttaaaatccgacaaaatcaatacaatccaacaaagtcttttaaaatctt 50899498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 50902572 - 50902514
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||    
T  50902572 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatct 50902514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 51736979 - 51736917
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| |||||| || |||||||||||||||||||    
T  51736979 taaaaagtcttttaaaatctcacagaatcaatacaatctcgcatagtcttttaaaatcttaaa 51736917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 54629833 - 54629895
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||| ||||||||    
T  54629833 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaacatcttaaa 54629895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 48380123 - 48380188
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    |||||| | |||||||||| |||| |||||||| ||||||||| | ||||||||||||||||||||    
T  48380123 taaaaagttttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaaga 48380188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 24573544 - 24573485
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||| |||| ||||||||  |||||| |||||||| ||||||||||||||||||||||    
T  24573544 taaaaagtcttctaaaatccatcaaaattaatataatttcacaaagtcttttaaaatctt 24573485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 38628930 - 38628875
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaat 191  Q
    ||||| |||||||||||||||||||||||||| |||   |||||||||||||||||    
T  38628930 aaaaagtcttttaaaatcccacaaaatcaatacaattcaacaaagtcttttaaaat 38628875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 44707927 - 44707982
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||||||||| |||| ||||  || |||||||||||||||||||||||||||||    
T  44707927 tcttttaaaatctcacagaatcggtacaatctcacaaagtcttttaaaatcttaaa 44707982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 10661170 - 10661232
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||  |||| |||||||| ||||||||| | |||||||||||||||||    
T  10661170 taaaaagtcttttaaaatatcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 10661232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 23754529 - 23754579
Alignment:
Q  144 ttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||| ||||||||||||||||||| ||||  ||||||||||||||||||||    
T  23754529 ttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23754579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 26292673 - 26292616
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||| ||||||||| |||| ||||  ||||||||||||||||||||    
T  26292673 aaaaagtcttttaaaattccacaaaat-aatacaatccaacaaagtcttttaaaatctt 26292616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 36786901 - 36786950
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||||||||||| ||||| |||||||||||||||||   |||||||||||||    
T  36786901 tcttttaaaatccaacaaagtcaatataatctcacaa---cttttaaaatctt 36786950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 20833882 - 20833943
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    ||||| ||||||||||||  ||| |||||||| ||||| ||| | |||||||||||||||||    
T  20833882 aaaaaatcttttaaaatcttacagaatcaatacaatcttacacaatcttttaaaatcttaaa 20833943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 46251303 - 46251251
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||| || |||  ||||| |||| |||||||||||||||||||||    
T  46251303 tcttttaaaatctcaaaaagccaatacaatcacacaaagtcttttaaaatctt 46251251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 38821361 - 38821303
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  38821361 aaaaagtcttttaaaatccaacaaaatcaatataatctcacaaaatcttttaaaatctt 38821303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 7487070 - 7487009
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  7487070 tgtaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 7487009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 13832780 - 13832718
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  13832780 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 13832718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 18178255 - 18178317
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  18178255 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 18178317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 20156691 - 20156633
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||| ||||||||||||||    
T  20156691 aaaaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcttttaaaatctt 20156633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 25289138 - 25289200
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  25289138 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 25289200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 26789768 - 26789830
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  26789768 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 26789830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 29941865 - 29941923
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  29941865 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 29941923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 3464568 - 3464632
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||| ||| |||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||    
T  3464568 tgtataaagtcttttaaaatctcacaaaatcaatagaatctgacacagtcttttaaaatcttaaa 3464632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 43079473 - 43079528
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  43079473 tcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaa 43079528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 6288658 - 6288608
Alignment:
Q  144 ttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  6288658 ttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 6288608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 28845561 - 28845623
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| ||||||| |||||||||||    
T  28845561 taaaaagtcttttaaaatctcacagaatcaatacaatctcacatagtctttaaaaatcttaaa 28845623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 33136577 - 33136639
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| || | |||||||| ||||||||| |||||||||||||||||||    
T  33136577 taaaaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaa 33136639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 34027887 - 34027829
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||| || |||||||||||    
T  34027887 aaaaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcctttaaaatctt 34027829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 45547891 - 45547949
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  45547891 aaaaagtcttttaaaatctcacaaaatcaatacaatccaacaaagtcttttaaaatctt 45547949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 7027889 - 7027950
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    ||||| ||| |||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  7027889 aaaaagtctattaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 7027950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 2289266 - 2289318
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||  ||||||||||| |||| |||||||||||||||||||||    
T  2289266 tcttttaaaatccatcaaaatcaatacaatcacacaaagtcttttaaaatctt 2289318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 10658423 - 10658478
Alignment:
Q  145 tttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    ||||||| | ||||||||||||| ||||||| | ||||||||||||||||||||||    
T  10658423 tttaaaaactcacaaaatcaatacaatctcatacagtcttttaaaatcttaaaaga 10658478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 27979879 - 27979931
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||||||| ||||| ||||| |||| |||| |||||||||||||||||||||    
T  27979879 tcttttaaattcccataaaattaatacaatcacacaaagtcttttaaaatctt 27979931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 28066409 - 28066461
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||||||| ||||| ||||| |||| |||| |||||||||||||||||||||    
T  28066409 tcttttaaattcccataaaattaatacaatcacacaaagtcttttaaaatctt 28066461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 36599255 - 36599197
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||| ||| |||||||||||||||    ||||||||||||||||||    
T  36599255 aaaaaatcttttaaaataccataaaatcaatataatcgattaaagtcttttaaaatctt 36599197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 45497494 - 45497544
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatc 192  Q
    |||||||||||| || |||||||||| |||| |||||| ||||||||||||    
T  45497494 tcttttaaaatctcaaaaaatcaatacaatcacacaaaatcttttaaaatc 45497544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 45505236 - 45505286
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatc 192  Q
    |||||||||||| || |||||||||| |||| |||||| ||||||||||||    
T  45505236 tcttttaaaatctcaaaaaatcaatacaatcacacaaaatcttttaaaatc 45505286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 28739243 - 28739186
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatc 192  Q
    |||||| |||||||||||| |||| |||||||| ||||||| |  |||||||||||||    
T  28739243 taaaaagtcttttaaaatctcacagaatcaatacaatctcagacggtcttttaaaatc 28739186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 43023508 - 43023560
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||  ||||||||||| |||| || ||||| ||||||||||||    
T  43023508 tcttttaaaatccatcaaaatcaatacaatcacataaagttttttaaaatctt 43023560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 28386670 - 28386608
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  28386670 taaaaagtcttttaaaatctcacaaaatcaatagaatctcacacagtcttttaaaatcttaaa 28386608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 51826074 - 51826013
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||| ||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  51826074 tgtaaaaagtcttttaaaatgccacaaaatcaatacaatcacacaaagtcttttaaaatctt 51826013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 39758856 - 39758916
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    |||||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  39758856 tgtaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatct 39758916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 39764210 - 39764270
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    |||||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  39764210 tgtaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatct 39764270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 45273544 - 45273607
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaa 198  Q
    |||||| |||||||||||| || |||||||||||||||||| | ||||||||||||||||||||    
T  45273544 taaaaagtcttttaaaatctcataaaatcaatataatctcatatagtcttttaaaatcttaaaa 45273607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 1923479 - 1923421
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||| ||||||||||||||    
T  1923479 aaaaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcttttaaaatctt 1923421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 6313559 - 6313621
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  6313559 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 6313621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 9321731 - 9321669
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  9321731 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 9321669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 14389398 - 14389456
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  14389398 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 14389456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 20111793 - 20111731
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| ||||| || |||||||||||||||||||||||||||||    
T  20111793 taaaaagtcttttaaaatctcacagaatcagtacaatctcacaaagtcttttaaaatcttaaa 20111731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 25613075 - 25613137
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  25613075 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 25613137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 29220095 - 29220157
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  29220095 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 29220157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 29395649 - 29395587
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  29395649 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 29395587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 51702577 - 51702639
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  51702577 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 51702639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 52706364 - 52706422
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  52706364 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 52706422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 28038445 - 28038388
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    ||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  28038445 aaaaagtcttttaaaatcctataaaatcaatataatttcacaaagtcttttaaaatct 28038388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 48198937 - 48198992
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||||||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  48198937 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 48198992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 48207520 - 48207575
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||||||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  48207520 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 48207575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 5494369 - 5494307
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| | |||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  5494369 taaaaagtgttttaaaatctcacataatcaatacaatctcacagagtcttttaaaatcttaaa 5494307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 19894808 - 19894858
Alignment:
Q  144 ttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  19894808 ttttaaaattccacaaaatcaatataatcacacaaaatcttttaaaatctt 19894858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 26881926 - 26881868
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  |||||||||| |||||||||    
T  26881926 aaaaaatcttttaaaatcccacaaaatcaatacaatccaacaaagtcttctaaaatctt 26881868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 45319451 - 45319509
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||| ||||||||||| ||||  ||||||||||||||||||||    
T  45319451 aaaaagtcttttaaaatcccgcaaaatcaatacaatccaacaaagtcttttaaaatctt 45319509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 49231967 - 49232029
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| | |||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  49231967 taaaaagtattttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 49232029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 46328949 - 46329012
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaa 198  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||| |||||| ||||    
T  46328949 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttgaaatctaaaaa 46329012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 45535733 - 45535791
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||| |||| |||||||||    
T  45535733 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaaatcttctaaaatctt 45535791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 4289865 - 4289923
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaat 191  Q
    |||||||| || |||||||||||| | |||||||| |||  ||||||||||||||||||    
T  4289865 tgtaaaaagtcatttaaaatcccatataatcaatagaattacacaaagtcttttaaaat 4289923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 38535368 - 38535306
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| || | |||||||| ||||| ||| || ||||||||||||||||    
T  38535368 taaaaagtcttttaaaatctcatagaatcaatacaatctaacacagacttttaaaatcttaaa 38535306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 38557586 - 38557524
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| || | |||||||| ||||| ||| || ||||||||||||||||    
T  38557586 taaaaagtcttttaaaatctcatagaatcaatacaatctaacacagacttttaaaatcttaaa 38557524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 6e-17; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 4199699 - 4199634
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||||||||||||    
T  4199699 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaaga 4199634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 10262904 - 10262853
Alignment:
Q  144 ttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctta 195  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  10262904 ttttaaaatccaacataatcaatataatctcacaaagtcttttaaaatctta 10262853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 3109460 - 3109402
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  3109460 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 3109402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 6475853 - 6475795
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  6475853 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 6475795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 14261662 - 14261600
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  14261662 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 14261600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 29864862 - 29864804
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  29864862 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 29864804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 30384283 - 30384221
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  30384283 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 30384221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 5958037 - 5958088
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  5958037 tcttttaaaatccatcaaaatcaatataatcacacaaagtcttttaaaatct 5958088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 7104514 - 7104569
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||||||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  7104514 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 7104569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 8790116 - 8790061
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||||||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  8790116 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 8790061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 27585289 - 27585234
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  27585289 tcttttaaaatctcacagaatcaataaaatctcacacagtcttttaaaatcttaaa 27585234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 7498073 - 7498135
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| | |||||||||||||||||    
T  7498073 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 7498135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 31068403 - 31068465
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||  |||| |||||||| ||||||||| |||||||||||||||||||    
T  31068403 taaaaagtcttttaaaatatcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 31068465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 31896620 - 31896682
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| ||| |||||||||||||||    
T  31896620 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtattttaaaatcttaaa 31896682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 34774368 - 34774430
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||| ||| |||||||||||||||||||    
T  34774368 taaaaagtcttttaaaatctcacagaatcaatacaatcttacacagtcttttaaaatcttaaa 34774430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 20557 - 20499
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  20557 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 20499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 33935 - 33877
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  33935 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 33877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 80903 - 80845
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  80903 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 80845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 1459407 - 1459345
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  1459407 taaaaagtcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaa 1459345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 10553712 - 10553770
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  10553712 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 10553770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 13717078 - 13717140
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| ||||||||||||| ||||||||| | |||||||||||||||||    
T  13717078 taaaaagtcttttaaaatctcacaaaatcaatacaatctcacacaatcttttaaaatcttaaa 13717140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 13999326 - 13999264
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  13999326 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 13999264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 40012929 - 40012867
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| ||||||||||||| |||||||||  ||||||||||||||||||    
T  40012929 taaaaagtcttttaaaatctcacaaaatcaatacaatctcacactgtcttttaaaatcttaaa 40012867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 40411393 - 40411451
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  40411393 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 40411451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 1151511 - 1151449
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| | |||||||||||||||||    
T  1151511 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 1151449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 3603570 - 3603512
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||| |||||||||||||| ||||  ||||||||||||||||||||    
T  3603570 aaaaaatcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatctt 3603512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 4239692 - 4239630
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| ||| |||| ||||||||| |||||||||||||||||||    
T  4239692 taaaaagtcttttaaaatctcacagaattaataaaatctcacacagtcttttaaaatcttaaa 4239630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 4549477 - 4549415
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| | |||||||||||||||||    
T  4549477 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 4549415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 7947245 - 7947183
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| |||||||||  ||||||||||||||||||    
T  7947245 taaaaaatcttttaaaatctcacagaatcaatacaatctcacacggtcttttaaaatcttaaa 7947183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 10553541 - 10553491
Alignment:
Q  144 ttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  10553541 ttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 10553491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 11632788 - 11632738
Alignment:
Q  144 ttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  11632788 ttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 11632738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 13926915 - 13926977
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||| ||||||||||    
T  13926915 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtctttttaaatcttaaa 13926977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 13949911 - 13949853
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||| |||||||||||||||||| ||||  ||||||||||||||||||||    
T  13949911 aaaaagtcttttataatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 13949853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 39853335 - 39853393
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||    
T  39853335 taaaaagtcttttaaaatctcacagaatcaatacaatctcacagagtcttttaaaatct 39853393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 17519493 - 17519548
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaat 191  Q
    ||||| |||||||||||| |||| |||||||| ||||| |||||||||||||||||    
T  17519493 aaaaaatcttttaaaatctcacagaatcaataaaatcttacaaagtcttttaaaat 17519548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 5950101 - 5950166
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    |||||| || ||||||||| |||| |||||||| ||||||||| | | ||||||||||||||||||    
T  5950101 taaaaagtcatttaaaatctcacagaatcaatacaatctcacataatattttaaaatcttaaaaga 5950166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 2275373 - 2275321
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||||| |||||  ||||||||||| |||| |||||||||||||||||||||    
T  2275373 tcttttagaatccatcaaaatcaatacaatcacacaaagtcttttaaaatctt 2275321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 32827954 - 32827897
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaa 190  Q
    |||||||| ||||| |||||||||  ||||||||| ||||  ||||||||||||||||    
T  32827954 tgtaaaaagtctttcaaaatcccattaaatcaatacaatccaacaaagtcttttaaaa 32827897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 8583111 - 8583053
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  8583111 aaaaaatcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 8583053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 27769047 - 27769109
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  27769047 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 27769109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 32683246 - 32683184
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  32683246 taaaaaatcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 32683184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 54342130 - 54342192
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  54342130 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 54342192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 7808971 - 7809032
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||| ||||||||||||| |||||||||||| ||||  ||||||||||||||||||||    
T  7808971 tgtaaaaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatctt 7809032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 49834086 - 49834022
Alignment:
Q  133 tgtaaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||| ||| |||||||||||| ||||||||||||| ||||||||| | |||||||||||||||||    
T  49834086 tgtataaagtcttttaaaatctcacaaaatcaatacaatctcacataatcttttaaaatcttaaa 49834022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 5442376 - 5442436
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| ||||||||||||| ||||||||  |||||||||||||||||||    
T  5442376 taaaaagtcttttaaaatctcacaaaatcaatacaatctcac--agtcttttaaaatcttaaa 5442436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 3434937 - 3434879
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||| |||||||||||||| ||||  ||||||||||||||||||||    
T  3434937 aaaaaatcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatctt 3434879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 5801688 - 5801746
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||    
T  5801688 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatct 5801746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 7820925 - 7820983
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||||| |||||||||||| ||||  ||||||||||||||||||||    
T  7820925 aaaaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatctt 7820983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 23988180 - 23988242
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| | |||||||||||||||||    
T  23988180 taaaaagtcttttaaaatctcacagaatcaatacaatctcacatattcttttaaaatcttaaa 23988242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 29649241 - 29649179
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| || | |||||||| ||||||||| |||||||||||||||||||    
T  29649241 taaaaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaa 29649179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 32323052 - 32323114
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| | |||||||||||||||||    
T  32323052 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 32323114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 42315866 - 42315916
Alignment:
Q  144 ttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  42315866 ttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 42315916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 48262058 - 48262120
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||| ||||| |||||||||||||||||||    
T  48262058 taaaaagtcttttaaaatctcacagaatcaatacaatttcacacagtcttttaaaatcttaaa 48262120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 50019174 - 50019236
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||| |||||    
T  50019174 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaattttaaa 50019236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 38234593 - 38234648
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    ||||||||||||  ||| |||||||| |||| ||||||||||||||||||||||||    
T  38234593 tcttttaaaatcttacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 38234648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 53272829 - 53272880
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatct 193  Q
    |||||||||||| || |||||||||| |||| ||||||||||||||||||||    
T  53272829 tcttttaaaatctcataaaatcaatagaatcacacaaagtcttttaaaatct 53272880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 16654157 - 16654215
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| ||||||||||| | ||||| ||| |||||||||||||| ||||||||||||||    
T  16654157 aaaaagtcttttaaaattcaacaaagtcagtataatctcacaaaatcttttaaaatctt 16654215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 30966296 - 30966234
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| || | |||||||||||||||| | | |||||||||||||||||    
T  30966296 taaaaagtcttttaaaatctcatagaatcaatataatctcatacaatcttttaaaatcttaaa 30966234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 37827647 - 37827585
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| || ||||||||| || | |||||||| ||||||||| |||||||||||||||||||    
T  37827647 taaaaagtcatttaaaatctcagagaatcaatacaatctcacacagtcttttaaaatcttaaa 37827585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 41726089 - 41726151
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||||| | | |||||||||||||||||    
T  41726089 taaaaagtcttttaaaatctcacataatcaatacaatctcaaacaatcttttaaaatcttaaa 41726151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 42217557 - 42217500
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    ||||| |||||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  42217557 aaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtc-tttaaaatctt 42217500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 48532032 - 48531970
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||| |||| |||||||| ||||| ||| | |||||||||||||||||    
T  48532032 taaaaagtcttttaaaatctcacagaatcaatacaatcttacagaatcttttaaaatcttaaa 48531970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 49500751 - 49500689
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||  |||| |||||||| |||||| || |||||||||||||||||||    
T  49500751 taaaaagtcttttaaaatttcacagaatcaatacaatctcgcacagtcttttaaaatcttaaa 49500689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 51321839 - 51321901
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| |||||||||||  |||| |||||||| ||||||||| |||| ||||||||||||||    
T  51321839 taaaaagtcttttaaaatttcacagaatcaatacaatctcacatagtcgtttaaaatcttaaa 51321901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 28484855 - 28484916
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaa 196  Q
    |||||| |||||||||||| ||||||||||||| ||| ||||| | ||||||||||| ||||    
T  28484855 taaaaaatcttttaaaatctcacaaaatcaatacaatttcacacaatcttttaaaattttaa 28484916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 52110242 - 52110294
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||| || |||||||||| |||| |||||| ||||||||||||||    
T  52110242 tcttttaaaatctcaaaaaatcaatacaatcgcacaaaatcttttaaaatctt 52110294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 37916776 - 37916842
Alignment:
Q  136 aaaaattcttttaaaatcccacaaaatcaatataat-----ctcacaaagtcttttaaaatcttaaa 197  Q
    ||||| |||||||||||| ||||||||||||| |||     |||||| |||||||||||||||||||    
T  37916776 aaaaagtcttttaaaatctcacaaaatcaatacaatacaatctcacacagtcttttaaaatcttaaa 37916842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 44647710 - 44647756
Alignment:
Q  148 aaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||||||| | |||| ||||||||||||| |||||||    
T  44647710 aaaatcccacaaaatcaacacaatcacacaaagtcttttcaaatctt 44647756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 57281 - 57220
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaa 196  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||||||||    
T  57281 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaa 57220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 1042 - 990
Alignment:
Q  142 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 194  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  1042 tcttttaaaatcccacaaaatcaatacaatcacacaaaatcttttaaaatctt 990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 3685 - 3623
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| | |||||||||| |||| |||||||| ||||||||| ||||| |||||||||||||    
T  3685 taaaaagttttttaaaatctcacagaatcaatacaatctcacacagtctcttaaaatcttaaa 3623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 3225 - 3163
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 197  Q
    |||||| ||| |||||||| |||| ||| |||| ||||||||| |||||||||||||||||||    
T  3225 taaaaagtctcttaaaatctcacataattaatacaatctcacacagtcttttaaaatcttaaa 3163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1521 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 1404 - 1339
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    |||||| |||||||||||| |||| |||||||| |||||||||  |||||| ||||||||| ||||    
T  1404 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatcttataaga 1339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 16259 - 16194
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    |||||| |||||||||||| |||| |||||||| |||||||||  |||||| ||||||||| ||||    
T  16259 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatcttataaga 16194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 20486 - 20421
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    |||||| |||||||||||| |||| |||||||| |||||||||  |||||| ||||||||| ||||    
T  20486 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatcttataaga 20421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 29315 - 29380
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaaaga 200  Q
    |||||| |||||||||||| |||| |||||||| |||||||||  |||||| ||||||||| ||||    
T  29315 taaaaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatcttataaga 29380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 38864 - 38796
Alignment:
Q  135 taaaaattcttttaaaatcccacaaaatcaatataatctcacaa-----agtcttttaaaatcttaaaa 198  Q
    |||||| |||||||||||| |||| |||||||| |||||||||      ||||||||||||||||||||    
T  38864 taaaaaatcttttaaaatctcacagaatcaatacaatctcacatcacacagtcttttaaaatcttaaaa 38796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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