View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4652_high_6 (Length: 288)
Name: NF4652_high_6
Description: NF4652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4652_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 43868105 - 43868380
Alignment:
| Q |
1 |
ctcttcaatactagttttcttccacttgttcctgaactcggaggtgaagaagaacaaggacaagaactacttgttgatattgacgaggctgatgaggagc |
100 |
Q |
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| T |
43868105 |
ctcttcaatactagttttcttccacttgttcctgaactcggaggtgaagaagaacaaggacaagaactacttgttgatattgatgaggctgatgaggagc |
43868204 |
T |
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| Q |
101 |
agttgctgtgtcgtgtgccagttttcgatgccaacccttttgatttagagacttgtactgtgaaaaatgatgctgttgattttgaggaaatgtgtgactt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43868205 |
agttgctgtgtcgtgtgccagttttcgatgccaacccttttgatttagagacttgtactgtgaaaaatgatgctgttgattttgaggaaatgtgtgactt |
43868304 |
T |
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| Q |
201 |
ggatagtttctgtgagtttgatgttgatcttgctgaatttgcagctaatgttgaaagtttacttggtgttgggagt |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43868305 |
ggatagtttctgtgagtttgatgttgatcttgctgaatttgcagctaatgttgaaagtttacttggtgttgggagt |
43868380 |
T |
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