View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4652_low_15 (Length: 250)
Name: NF4652_low_15
Description: NF4652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4652_low_15 |
 |  |
|
| [»] scaffold0110 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 17)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 15590501 - 15590370
Alignment:
| Q |
1 |
ttgactcagcttaagggaaattcacacatgcttatgtcttacgtggacatgaggtggctgattactaccaatatatgaatgccacgttggtacatattgt |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15590501 |
ttgactcagcttaagggaaattcatg--tgcttatgtcttacgtggacatgaggtggctgattactaccaatatatgaatgccacgttggtacatattgt |
15590404 |
T |
 |
| Q |
101 |
cattgctattgtgtggcataatatcattggttag |
134 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
15590403 |
cattgctattgtgtggcatactatcattggttag |
15590370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 3582908 - 3582846
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| |
|
|
| T |
3582908 |
ttagagcatccacaatggagaccctcatatttaaggtcttaaacatgtcccacatggacacat |
3582846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 30335632 - 30335698
Alignment:
| Q |
127 |
ttggttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||||| |
|
|
| T |
30335632 |
ttggtaagagcatccacaatggagaccctcaactttgaggtcttaaacaggtttcacattgacacat |
30335698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 15590138 - 15590093
Alignment:
| Q |
195 |
taaggaaaatcattataaatccaccagttgtgattgtgagtctgtg |
240 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15590138 |
taaggaaaatcattataaatccactagttgtgattgtgagtctgtg |
15590093 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 5827733 - 5827673
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||| |||||| |||||||| ||||||||| |
|
|
| T |
5827733 |
agagcatccacaatggagactctcacatttgaggttttaaacgggtctcacatggacacat |
5827673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 15611965 - 15611903
Alignment:
| Q |
69 |
caatatatgaatgccacgttggtacatattgtcattgctattgtgtggcataatatcattggt |
131 |
Q |
| |
|
|||| ||||||||||||||||||| | |||||||||| |||||||||||||| ||| |||||| |
|
|
| T |
15611965 |
caatgtatgaatgccacgttggtagagattgtcattggtattgtgtggcatattattattggt |
15611903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 43177766 - 43177807
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaac |
174 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
43177766 |
agagcatccacaatggagaccctcacatttgaggtcttaaac |
43177807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 23625304 - 23625241
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacata |
194 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||||||| |||| ||| | |||||||| |
|
|
| T |
23625304 |
ttagagcatccacaatggagactctcatctttgaggtcttaaatgggtcccacattgacacata |
23625241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 51244007 - 51244049
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
51244007 |
ttagagcattcacaatggagactctcatatttgaggtcttaaa |
51244049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 15602522 - 15602457
Alignment:
| Q |
66 |
taccaatatatgaatgccacgttggtacatattgtcattgctattgtgtggcataatatcattggt |
131 |
Q |
| |
|
|||||||||||||||||||||| || |||| |||||||||| ||||||||| || ||| |||||| |
|
|
| T |
15602522 |
taccaatatatgaatgccacgtcggaacatcttgtcattgcagttgtgtggcgtactataattggt |
15602457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 8779657 - 8779697
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
8779657 |
agagcatccacaatggagactctcatatttgagatcttaaa |
8779697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 14395915 - 14395955
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
14395915 |
agagcatccacaatggagactctcatctttgaggtcttaaa |
14395955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 35615399 - 35615439
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
35615399 |
agagcatccacaatggagaccctcaactttgaggtcttaaa |
35615439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 14884803 - 14884761
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
14884803 |
ttagagcatctacaatggagactctcatctttgaggtcttaaa |
14884761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 23740272 - 23740230
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
||||||| |||||||||||||| ||||| |||||||||||||| |
|
|
| T |
23740272 |
ttagagcttccacaatggagactctcatctttgaggtcttaaa |
23740230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 6704111 - 6704167
Alignment:
| Q |
135 |
agcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacac |
191 |
Q |
| |
|
||||| ||||||||||||||||| |||||| ||||||| |||||||| ||||||| |
|
|
| T |
6704111 |
agcattcacaatggagaccctcaattttgagatcttaaatgggtctcacatggacac |
6704167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 44573797 - 44573849
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcac |
183 |
Q |
| |
|
|||||||||||||||| | ||| ||||| |||||||||||||| |||||||| |
|
|
| T |
44573797 |
ttagagcatccacaatagtgactctcatctttgaggtcttaaatgggtctcac |
44573849 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 11511839 - 11511903
Alignment:
| Q |
129 |
ggttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| ||||||||| |
|
|
| T |
11511839 |
ggttagagcatccacaatggagacactcatatttgaggtcttaaacgggtcccacatggacacat |
11511903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 20683542 - 20683482
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
20683542 |
agagcatccacaatagagaccctcacatttgaggtcttaaataggtctcacatggacacat |
20683482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 43302491 - 43302431
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||||||| ||| | ||||||| |
|
|
| T |
43302491 |
agagcatccacaatagagaccctcaattttgaggtcttaaacaggtcccacattgacacat |
43302431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 32414720 - 32414680
Alignment:
| Q |
134 |
gagcatccacaatggagaccctcatatttgaggtcttaaac |
174 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
32414720 |
gagcatccacaatggagatcctcaaatttgaggtcttaaac |
32414680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 39446057 - 39446008
Alignment:
| Q |
130 |
gttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtc |
179 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
39446057 |
gttagaacatccacaatggagaccctcaatcttgaggtcttaaacgggtc |
39446008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 7772716 - 7772776
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||| ||||||||||||||| ||| ||| ||||||||||| | |||||| ||||||||| |
|
|
| T |
7772716 |
agagcctccacaatggagaccttcaattttaaggtcttaaacggatctcacatggacacat |
7772776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 45154481 - 45154449
Alignment:
| Q |
161 |
ttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
45154481 |
ttgaggtcttaaacaggtctcacatggacacat |
45154449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 38138147 - 38138210
Alignment:
| Q |
130 |
gttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
38138147 |
gttagagcatccacaatggagaccctcacatttgaggtcttaaacgggtctcatatggacacat |
38138210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 50346124 - 50346083
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaac |
174 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
50346124 |
agagcatccacaatggagaccctcacatttgaggtcttaaac |
50346083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 31153317 - 31153380
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttg-aggtcttaaacaggtctcacgtggacacata |
194 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||||||||||| |||| ||| || ||||||| |
|
|
| T |
31153317 |
ttagagcatccacaatggagaccctca-atttgaaggtcttaaacgggtcccacctgtacacata |
31153380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 51309705 - 51309645
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||||| |||||||||| ||| ||||||||||||| |||||| || |||||| |
|
|
| T |
51309705 |
agagcatccacaattgagaccctcaaattgaaggtcttaaacagatctcacttgtacacat |
51309645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 4489655 - 4489617
Alignment:
| Q |
135 |
agcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
4489655 |
agcatccacaatggagactctcatctttgaggtcttaaa |
4489617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 24744340 - 24744402
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||||| ||| | || ||| ||||||| |||||||||||| |||||| |
|
|
| T |
24744340 |
ttagagcatccacaatggagatcctgaatttggagttcttaaataggtctcacgtgtacacat |
24744402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 21084699 - 21084658
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaac |
174 |
Q |
| |
|
|||| ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
21084699 |
agagtatccacaatggagactctcacatttgaggtcttaaac |
21084658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 25926321 - 25926382
Alignment:
| Q |
128 |
tggttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggac |
189 |
Q |
| |
|
|||| ||||||| ||||| |||||||||| |||||||||||||||| |||| ||| ||||| |
|
|
| T |
25926321 |
tggtaagagcatttacaatcgagaccctcacatttgaggtcttaaacgggtcccacatggac |
25926382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 47968238 - 47968201
Alignment:
| Q |
136 |
gcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |
|
|
| T |
47968238 |
gcatccacaatggagaccctcaactttgaggtcttaaa |
47968201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 3433092 - 3433032
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||| ||||| ||| ||||||||| | |||||||| || |||||| |
|
|
| T |
3433092 |
agagcatccacaatggagatcctcaaattgaaggtcttaagcgggtctcacttgtacacat |
3433032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 14464951 - 14464991
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
||||||||||| |||||||| ||||| |||||||||||||| |
|
|
| T |
14464951 |
agagcatccacgatggagactctcatctttgaggtcttaaa |
14464991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 18807186 - 18807126
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacac |
191 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| |||||| |||||||| ||||||| |
|
|
| T |
18807186 |
ttagagcatccacaatggagaccctcacatttgaggttttaaacgggtctcacatggacac |
18807126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 14728839 - 14728901
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |
|
|
| T |
14728839 |
ttagagcatccacaatggagaccctcaactttgaggtcttaaatgggtctcacatggacacat |
14728901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 29416811 - 29416749
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||| ||||| || | ||||||| |
|
|
| T |
29416811 |
ttagagcatccacaatggaaaccctcacatttgaggtcttaaacgggtcttacatagacacat |
29416749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 10288232 - 10288172
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||| ||||| ||||||||| |||||||||||||||| |||||||| ||||||||| |
|
|
| T |
10288232 |
agagcatctacaataaagaccctcacatttgaggtcttaaacgggtctcacatggacacat |
10288172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 41123470 - 41123424
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtc |
179 |
Q |
| |
|
||||||| ||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
41123470 |
agagcattcacaatggagaccatcacatttgaggtcttaaacaggtc |
41123424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 26705698 - 26705738
Alignment:
| Q |
134 |
gagcatccacaatggagaccctcatatttgaggtcttaaac |
174 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
26705698 |
gagcatcaacaatggagaccctcacatttgaggtcttaaac |
26705738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 30905482 - 30905522
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
30905482 |
agagcatccacaatggaaaccctcaaatttgaggtcttaaa |
30905522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 13628958 - 13629020
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||| ||||||| |||||||| || |||||| |
|
|
| T |
13628958 |
ttagagcatccacaatggagacctccatttttgagttcttaaatgggtctcacatgtacacat |
13629020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 13729370 - 13729432
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||| ||||||| |||||||| || |||||| |
|
|
| T |
13729370 |
ttagagcatccacaatggagacctccatttttgagttcttaaatgggtctcacatgtacacat |
13729432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 32953349 - 32953307
Alignment:
| Q |
141 |
cacaatggagaccctcatatttgaggtcttaaacaggtctcac |
183 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
32953349 |
cacaatgaagacccttatatttgaggtcttaaacaagtctcac |
32953307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 33099517 - 33099569
Alignment:
| Q |
130 |
gttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctca |
182 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
33099517 |
gttagagcatccacaatggagaccctcaattttgaggtcttaaacgggtctca |
33099569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 4405613 - 4405661
Alignment:
| Q |
134 |
gagcatccacaatggagaccctcatatttgaggtcttaaacaggtctca |
182 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||| ||||||| |
|
|
| T |
4405613 |
gagcatccacaatagagacccttgcatttgaggtcttaaacgggtctca |
4405661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 32658349 - 32658409
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||| | ||||||| |||||||||||||||||| |
|
|
| T |
32658349 |
agagcatccacagtggagacactcatttttaggttcttaaatgggtctcacgtggacacat |
32658409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 8433671 - 8433731
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||| |
|
|
| T |
8433671 |
agagcatccacaatggagaccctcaactttgaggtcttaaataggtcccacatggacacat |
8433731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 13417182 - 13417242
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||||||||||| ||| ||| ||||||||| |
|
|
| T |
13417182 |
agagcatctacaatggagatcctcacatttgaggtcttaaacgggttccacatggacacat |
13417242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 25768356 - 25768296
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||| ||||||| ||||| |||||||||||||||| |||| ||| | ||||||| |
|
|
| T |
25768356 |
agagcatccacgatggagatcctcacatttgaggtcttaaacgggtcccacatagacacat |
25768296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 33494647 - 33494695
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtc |
179 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
33494647 |
ttagagcatccacaatggagaccctcaatcttgaagtcttaaacaggtc |
33494695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 40976592 - 40976540
Alignment:
| Q |
142 |
acaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacata |
194 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||| |||||||||| |
|
|
| T |
40976592 |
acaatggagaccctcatatttgaggtcttaaatgggttccacatggacacata |
40976540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 32535018 - 32534955
Alignment:
| Q |
130 |
gttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||| || |||||||| | ||||||| |
|
|
| T |
32535018 |
gttagagcatccacaatggagagtctcatctttgaggtcttgaattggtctcacattgacacat |
32534955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 8680459 - 8680520
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||||| ||||||| | | |||||||||||||||| |||||||| ||||||||| |
|
|
| T |
8680459 |
ttagagcatccaca-tggagacaattacatttgaggtcttaaacgggtctcacatggacacat |
8680520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 37194451 - 37194389
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||| ||||| |||||||| | ||||||| |
|
|
| T |
37194451 |
ttagagcatccacaatggagattctcatctttgaggttttaaatgggtctcacattgacacat |
37194389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 4277321 - 4277370
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctca |
182 |
Q |
| |
|
|||||||| ||||||||||| ||||| |||||||||||||| ||||||| |
|
|
| T |
4277321 |
agagcatctacaatggagactctcatctttgaggtcttaaatgggtctca |
4277370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 10933678 - 10933618
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||| |||| | || |||| |||||||||||||||| ||| |||| ||||||||| |
|
|
| T |
10933678 |
agagcatccataatgaacactctcacatttgaggtcttaaacgggtatcacatggacacat |
10933618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 37504073 - 37504019
Alignment:
| Q |
139 |
tccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||| |
|
|
| T |
37504073 |
tccacaatggagaccctcacatttgaagtcttaaacgggtcccacgtggacacat |
37504019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 22074464 - 22074402
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||||||||||||| |||||||| ||||||||| |
|
|
| T |
22074464 |
ttagagcattcacaatggagaacctctattttgaggtcttaaacgggtctcacatggacacat |
22074402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 33882253 - 33882191
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||||||| |||||| ||||||| |||||||||||||||| | || ||| ||||||||| |
|
|
| T |
33882253 |
ttagagcatccataatggaaaccctcacatttgaggtcttaaacggatcccacatggacacat |
33882191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 41003290 - 41003338
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtc |
179 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
41003290 |
ttagaacatccacaatggagactctcatatttgaagtcttaaataggtc |
41003338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 957930 - 957973
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaac |
174 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||| |||||||| |
|
|
| T |
957930 |
ttagagcatccataatggagaccctcacatttgagatcttaaac |
957973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 10248962 - 10248999
Alignment:
| Q |
136 |
gcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10248962 |
gcatccacaatggagaccctcaactttgaggtcttaaa |
10248999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 42710410 - 42710451
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaac |
174 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
42710410 |
agagcatccacaatggagaccctcaatcttgaggtcttaaac |
42710451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 17603737 - 17603785
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtc |
179 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| | |||||| |||| |
|
|
| T |
17603737 |
ttagagcatccacaatggagaccctcaattttgagatattaaacgggtc |
17603785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 36219276 - 36219226
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcac |
183 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
36219276 |
agagcatctacaatggagaccctcacatttgaggtcttaaacgggtctcac |
36219226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 26417391 - 26417339
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcac |
183 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| ||| ||||| |||||||| |
|
|
| T |
26417391 |
ttagagcatccacaatggagatcctcatatttgatgtcataaacgggtctcac |
26417339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 6076606 - 6076668
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||| |||| ||| || |||||| |
|
|
| T |
6076606 |
ttagagcatccacaatggagaccctcaaattgaaggtcttaaacgggtcccacttgtacacat |
6076668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 22424940 - 22425000
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||| |
|
|
| T |
22424940 |
agagcatccacaatggagaccttcaactttgaggtcttaaataggttccacatggacacat |
22425000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 6077826 - 6077869
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaac |
174 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6077826 |
ttagagcatccacaatggagaccctcaatcttgaggtcttaaac |
6077869 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 45064376 - 45064334
Alignment:
| Q |
131 |
ttagagcatccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
|||||||||||||||||||||| | ||| |||||||||||||| |
|
|
| T |
45064376 |
ttagagcatccacaatggagactcacatctttgaggtcttaaa |
45064334 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 30599945 - 30599885
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttga-ggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||| ||||||| || |||||| |
|
|
| T |
30599945 |
agagcatccacaatggagaccctca-atttgaaggtcttaaacgagtctcacttgtacacat |
30599885 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 2129128 - 2129068
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||| |||||| |||| ||||| |||||||||||||| ||||| ||| | ||||||| |
|
|
| T |
2129128 |
agagcatctacaatgaagactctcatctttgaggtcttaaagaggtcccacattgacacat |
2129068 |
T |
 |
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Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 51677013 - 51676977
Alignment:
| Q |
137 |
catccacaatggagaccctcatatttgaggtcttaaa |
173 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |
|
|
| T |
51677013 |
catccacaatggagaccctcaactttgaggtcttaaa |
51676977 |
T |
 |
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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 26672 - 26732
Alignment:
| Q |
133 |
agagcatccacaatggagaccctcatatttgaggtcttaaacaggtctcacgtggacacat |
193 |
Q |
| |
|
|||||||| ||||||||||| ||||| ||||||| |||||| || |||||| | ||||||| |
|
|
| T |
26672 |
agagcatctacaatggagactctcatctttgaggccttaaatagatctcacattgacacat |
26732 |
T |
 |
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