View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4653_low_35 (Length: 212)

Name: NF4653_low_35
Description: NF4653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4653_low_35
NF4653_low_35
[»] chr8 (44 HSPs)
chr8 (43-212)||(8054875-8055057)
chr8 (45-99)||(9992656-9992710)
chr8 (43-101)||(16937406-16937464)
chr8 (46-97)||(31874077-31874128)
chr8 (46-101)||(44295305-44295360)
chr8 (47-101)||(10042750-10042804)
chr8 (45-101)||(9270010-9270066)
chr8 (1-42)||(32104841-32104882)
chr8 (45-101)||(15665528-15665584)
chr8 (47-101)||(37658955-37659009)
chr8 (1-42)||(41996615-41996656)
chr8 (45-101)||(36545850-36545906)
chr8 (45-96)||(5989624-5989675)
chr8 (47-101)||(32256792-32256847)
chr8 (1-42)||(8054810-8054852)
chr8 (68-153)||(1810337-1810421)
chr8 (78-153)||(12329556-12329628)
chr8 (48-101)||(26937514-26937567)
chr8 (1-33)||(5457150-5457182)
chr8 (58-98)||(14115875-14115914)
chr8 (45-101)||(14530977-14531033)
chr8 (57-101)||(27534480-27534524)
chr8 (90-146)||(41996511-41996567)
chr8 (1-40)||(16996891-16996930)
chr8 (47-97)||(7269535-7269585)
chr8 (4-42)||(9270091-9270129)
chr8 (109-163)||(9501503-9501557)
chr8 (43-101)||(13977390-13977448)
chr8 (45-95)||(15237706-15237756)
chr8 (43-96)||(23766736-23766787)
chr8 (1-42)||(3680993-3681034)
chr8 (1-42)||(5989700-5989741)
chr8 (45-98)||(11655979-11656032)
chr8 (1-42)||(31147804-31147845)
chr8 (109-158)||(31202371-31202420)
chr8 (1-42)||(36545784-36545825)
chr8 (1-42)||(44295386-44295427)
chr8 (45-97)||(284544-284596)
chr8 (45-97)||(631281-631333)
chr8 (45-97)||(817093-817145)
chr8 (45-101)||(14327468-14327524)
chr8 (67-95)||(31147891-31147919)
chr8 (49-101)||(32061783-32061835)
chr8 (45-101)||(32920641-32920697)
[»] chr2 (45 HSPs)
chr2 (43-164)||(7640423-7640544)
chr2 (45-97)||(5930416-5930468)
chr2 (46-101)||(3390421-3390476)
chr2 (46-101)||(25771434-25771489)
chr2 (43-101)||(6089882-6089940)
chr2 (43-101)||(25516483-25516541)
chr2 (43-101)||(27191402-27191460)
chr2 (43-101)||(27841216-27841274)
chr2 (43-101)||(40125378-40125436)
chr2 (43-101)||(42105819-42105877)
chr2 (43-101)||(44167776-44167834)
chr2 (47-100)||(10589028-10589081)
chr2 (43-101)||(3464948-3465006)
chr2 (47-101)||(15674045-15674099)
chr2 (43-101)||(37883642-37883700)
chr2 (47-101)||(41176851-41176905)
chr2 (43-101)||(43566866-43566922)
chr2 (1-42)||(7640359-7640400)
chr2 (46-98)||(27024209-27024261)
chr2 (45-97)||(29812684-29812736)
chr2 (47-98)||(9715616-9715667)
chr2 (46-101)||(16880029-16880084)
chr2 (47-101)||(19581074-19581128)
chr2 (1-42)||(43929359-43929400)
chr2 (59-158)||(5754207-5754309)
chr2 (78-163)||(41797535-41797617)
chr2 (43-101)||(26491292-26491350)
chr2 (43-97)||(36507924-36507978)
chr2 (1-42)||(5930493-5930534)
chr2 (1-42)||(9715547-9715588)
chr2 (45-101)||(41841938-41841995)
chr2 (45-101)||(25623114-25623170)
chr2 (1-40)||(27191339-27191378)
chr2 (1-40)||(27841153-27841192)
chr2 (1-40)||(43566946-43566985)
chr2 (1-40)||(44167713-44167752)
chr2 (1-39)||(3465030-3465068)
chr2 (1-42)||(3390502-3390543)
chr2 (1-42)||(25771515-25771556)
chr2 (1-42)||(27024142-27024183)
chr2 (45-101)||(5071439-5071495)
chr2 (65-101)||(17037738-17037774)
chr2 (69-101)||(19953373-19953405)
chr2 (78-146)||(34416995-34417063)
chr2 (65-101)||(35353641-35353677)
[»] chr6 (23 HSPs)
chr6 (43-168)||(19759710-19759835)
chr6 (46-101)||(16913317-16913372)
chr6 (43-101)||(12576545-12576603)
chr6 (45-101)||(32457635-32457691)
chr6 (45-101)||(548934-548990)
chr6 (47-98)||(32804286-32804337)
chr6 (47-101)||(4663891-4663945)
chr6 (45-87)||(20845011-20845053)
chr6 (1-42)||(23843427-23843468)
chr6 (45-101)||(13234177-13234232)
chr6 (47-98)||(10744571-10744622)
chr6 (3-42)||(19759858-19759897)
chr6 (45-87)||(15128218-15128260)
chr6 (1-42)||(16913398-16913439)
chr6 (45-97)||(891581-891633)
chr6 (45-97)||(32574446-32574498)
chr6 (45-97)||(33194598-33194650)
chr6 (57-101)||(34020607-34020651)
chr6 (59-101)||(7049236-7049278)
chr6 (1-43)||(33194674-33194716)
chr6 (109-158)||(1302647-1302696)
chr6 (65-98)||(8644237-8644270)
chr6 (1-42)||(13234111-13234152)
[»] chr1 (44 HSPs)
chr1 (43-168)||(21326395-21326520)
chr1 (43-110)||(44562816-44562883)
chr1 (43-153)||(5832164-5832280)
chr1 (47-101)||(52839412-52839466)
chr1 (43-100)||(630852-630909)
chr1 (43-166)||(23320376-23320487)
chr1 (45-101)||(17579757-17579813)
chr1 (46-101)||(6212956-6213011)
chr1 (46-101)||(22344982-22345037)
chr1 (45-99)||(13691827-13691881)
chr1 (1-42)||(23320510-23320551)
chr1 (47-101)||(44514061-44514115)
chr1 (47-101)||(52839510-52839564)
chr1 (45-101)||(14717312-14717367)
chr1 (45-101)||(38646573-38646629)
chr1 (3-42)||(44562754-44562793)
chr1 (45-91)||(45659041-45659087)
chr1 (1-42)||(900192-900233)
chr1 (1-42)||(1768036-1768077)
chr1 (1-42)||(15698270-15698311)
chr1 (48-101)||(46589165-46589217)
chr1 (45-89)||(8893294-8893338)
chr1 (78-146)||(15791607-15791675)
chr1 (109-153)||(51417928-51417972)
chr1 (1-40)||(4564589-4564628)
chr1 (47-102)||(33177667-33177722)
chr1 (65-100)||(48655155-48655190)
chr1 (43-97)||(12148115-12148169)
chr1 (56-101)||(22032169-22032215)
chr1 (1-43)||(27469711-27469753)
chr1 (45-95)||(35077959-35078009)
chr1 (48-86)||(37685168-37685206)
chr1 (48-86)||(37700312-37700350)
chr1 (61-98)||(8937612-8937648)
chr1 (45-97)||(10877338-10877391)
chr1 (1-42)||(15276453-15276494)
chr1 (1-42)||(21326543-21326584)
chr1 (1-42)||(22344915-22344956)
chr1 (109-158)||(28678295-28678344)
chr1 (68-141)||(32784047-32784119)
chr1 (1-42)||(40488400-40488441)
chr1 (1-42)||(45659112-45659153)
chr1 (109-153)||(37825474-37825518)
chr1 (59-139)||(42276298-42276377)
[»] scaffold0722 (2 HSPs)
scaffold0722 (43-168)||(5593-5718)
scaffold0722 (1-42)||(5529-5570)
[»] chr5 (31 HSPs)
chr5 (43-170)||(4726995-4727118)
chr5 (45-101)||(34893985-34894041)
chr5 (43-101)||(28618593-28618651)
chr5 (45-101)||(9035017-9035073)
chr5 (46-101)||(6887248-6887303)
chr5 (46-101)||(31645818-31645873)
chr5 (47-101)||(29310420-29310474)
chr5 (47-101)||(33486641-33486695)
chr5 (43-100)||(4070545-4070601)
chr5 (45-97)||(41358031-41358084)
chr5 (45-97)||(2415393-2415445)
chr5 (47-94)||(18472796-18472843)
chr5 (47-101)||(41554475-41554529)
chr5 (48-101)||(37424982-37425035)
chr5 (45-101)||(19646110-19646166)
chr5 (45-101)||(41988173-41988229)
chr5 (46-101)||(6647983-6648038)
chr5 (1-42)||(4726931-4726972)
chr5 (55-100)||(8812231-8812276)
chr5 (1-42)||(41063399-41063440)
chr5 (110-168)||(5378254-5378313)
chr5 (3-42)||(32390652-32390691)
chr5 (1-42)||(10924136-10924177)
chr5 (1-42)||(28500787-28500828)
chr5 (46-102)||(34873848-34873905)
chr5 (109-161)||(6682030-6682082)
chr5 (45-98)||(15710532-15710587)
chr5 (47-95)||(22397619-22397667)
chr5 (122-162)||(39179987-39180027)
chr5 (45-101)||(40565224-40565280)
chr5 (45-89)||(41063465-41063509)
[»] chr4 (49 HSPs)
chr4 (43-142)||(52555788-52555887)
chr4 (75-168)||(46717002-46717095)
chr4 (43-136)||(42971992-42972085)
chr4 (43-102)||(23067915-23067974)
chr4 (45-98)||(28588553-28588606)
chr4 (45-101)||(9661842-9661898)
chr4 (46-101)||(14542582-14542637)
chr4 (43-98)||(54420779-54420834)
chr4 (43-97)||(16991865-16991919)
chr4 (45-101)||(3673612-3673668)
chr4 (45-101)||(41486564-41486620)
chr4 (46-101)||(4634272-4634327)
chr4 (43-101)||(46728987-46729044)
chr4 (45-98)||(4959644-4959697)
chr4 (1-42)||(23067851-23067892)
chr4 (45-95)||(1646010-1646060)
chr4 (47-97)||(3169033-3169083)
chr4 (48-101)||(43156765-43156819)
chr4 (68-153)||(478121-478205)
chr4 (56-97)||(1657650-1657691)
chr4 (45-101)||(5388504-5388560)
chr4 (45-93)||(34115721-34115769)
chr4 (68-161)||(394384-394473)
chr4 (45-100)||(7242838-7242893)
chr4 (68-153)||(43244491-43244578)
chr4 (43-113)||(44375331-44375401)
chr4 (1-42)||(9474542-9474583)
chr4 (47-96)||(37869488-37869536)
chr4 (1-42)||(42972108-42972149)
chr4 (1-42)||(50003179-50003220)
chr4 (1-42)||(52555724-52555765)
chr4 (45-101)||(4622780-4622836)
chr4 (45-101)||(11817061-11817117)
chr4 (45-85)||(46775925-46775965)
chr4 (45-100)||(29577154-29577209)
chr4 (3-42)||(46716899-46716938)
chr4 (1-40)||(54420716-54420755)
chr4 (47-97)||(1124929-1124979)
chr4 (47-97)||(6408433-6408483)
chr4 (1-42)||(2945207-2945248)
chr4 (1-42)||(9661923-9661964)
chr4 (1-42)||(12519726-12519767)
chr4 (1-42)||(14542515-14542556)
chr4 (109-146)||(24825562-24825599)
chr4 (47-100)||(30416693-30416746)
chr4 (1-42)||(41486645-41486686)
chr4 (1-42)||(44375267-44375308)
chr4 (47-95)||(51646088-51646136)
chr4 (43-83)||(53903617-53903657)
[»] chr7 (41 HSPs)
chr7 (43-141)||(43807217-43807315)
chr7 (43-159)||(30992890-30993008)
chr7 (43-101)||(24470384-24470442)
chr7 (43-101)||(24475332-24475390)
chr7 (45-98)||(25855289-25855342)
chr7 (45-101)||(47749723-47749779)
chr7 (46-101)||(40775256-40775311)
chr7 (43-98)||(49166919-49166974)
chr7 (45-99)||(7985883-7985937)
chr7 (43-101)||(8611689-8611747)
chr7 (47-101)||(28015345-28015399)
chr7 (1-42)||(26017661-26017702)
chr7 (49-98)||(47156388-47156437)
chr7 (45-101)||(29804745-29804801)
chr7 (47-101)||(43483583-43483637)
chr7 (1-42)||(30992826-30992867)
chr7 (1-42)||(43807153-43807194)
chr7 (45-98)||(44681454-44681506)
chr7 (78-158)||(21990583-21990663)
chr7 (45-101)||(23732462-23732518)
chr7 (56-100)||(38649438-38649482)
chr7 (46-101)||(16263376-16263431)
chr7 (47-98)||(35141824-35141875)
chr7 (68-153)||(40761519-40761600)
chr7 (78-152)||(28665031-28665105)
chr7 (48-101)||(21329368-21329420)
chr7 (45-101)||(33530537-33530591)
chr7 (46-98)||(14734120-14734172)
chr7 (45-97)||(24045301-24045353)
chr7 (1-40)||(24475414-24475453)
chr7 (1-40)||(40476780-40476819)
chr7 (47-101)||(8319303-8319357)
chr7 (44-98)||(10250549-10250603)
chr7 (45-79)||(42490713-42490747)
chr7 (4-42)||(47749804-47749842)
chr7 (1-42)||(23732396-23732437)
chr7 (1-42)||(40775337-40775378)
chr7 (54-101)||(5025134-5025182)
chr7 (109-153)||(11832939-11832983)
chr7 (47-95)||(26017729-26017777)
chr7 (65-101)||(29804977-29805013)
[»] chr3 (44 HSPs)
chr3 (45-101)||(20201127-20201183)
chr3 (45-101)||(20203309-20203365)
chr3 (43-98)||(50519782-50519837)
chr3 (45-101)||(1165465-1165521)
chr3 (43-101)||(22286816-22286874)
chr3 (43-101)||(41882475-41882533)
chr3 (43-101)||(45664218-45664276)
chr3 (45-98)||(35501828-35501881)
chr3 (45-98)||(25374139-25374192)
chr3 (45-101)||(1220284-1220340)
chr3 (45-101)||(21803519-21803575)
chr3 (50-101)||(22844040-22844091)
chr3 (46-101)||(43029672-43029727)
chr3 (45-95)||(53426799-53426849)
chr3 (45-101)||(1806529-1806585)
chr3 (45-101)||(4019591-4019646)
chr3 (45-101)||(37051613-37051669)
chr3 (45-97)||(40462064-40462116)
chr3 (55-101)||(42106100-42106146)
chr3 (45-101)||(20251640-20251697)
chr3 (65-98)||(25939565-25939598)
chr3 (45-98)||(43242803-43242856)
chr3 (1-42)||(47914596-47914637)
chr3 (1-42)||(54240156-54240197)
chr3 (45-93)||(7656546-7656592)
chr3 (1-40)||(3088666-3088705)
chr3 (1-40)||(22286753-22286792)
chr3 (58-101)||(25631692-25631735)
chr3 (68-141)||(30156399-30156468)
chr3 (45-92)||(33070152-33070199)
chr3 (3-42)||(43839523-43839562)
chr3 (47-97)||(2598076-2598126)
chr3 (4-42)||(21803600-21803638)
chr3 (4-42)||(45664291-45664329)
chr3 (1-42)||(1165399-1165440)
chr3 (1-42)||(14741328-14741369)
chr3 (1-42)||(32089933-32089974)
chr3 (45-98)||(34766973-34767024)
chr3 (1-42)||(35501762-35501803)
chr3 (47-100)||(40797023-40797075)
chr3 (1-42)||(43029753-43029794)
chr3 (45-98)||(43839587-43839638)
chr3 (45-73)||(29182677-29182705)
chr3 (47-97)||(33977994-33978041)
[»] scaffold0045 (1 HSPs)
scaffold0045 (43-101)||(9715-9773)
[»] scaffold1294 (1 HSPs)
scaffold1294 (48-96)||(774-822)
[»] scaffold0340 (1 HSPs)
scaffold0340 (43-95)||(11844-11896)
[»] scaffold0316 (2 HSPs)
scaffold0316 (45-91)||(12272-12318)
scaffold0316 (1-42)||(12206-12247)
[»] scaffold0011 (1 HSPs)
scaffold0011 (45-98)||(11011-11064)
[»] scaffold0665 (1 HSPs)
scaffold0665 (58-98)||(1174-1213)
[»] scaffold0536 (1 HSPs)
scaffold0536 (78-141)||(2839-2902)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-42)||(1144-1185)


Alignment Details
Target: chr8 (Bit Score: 115; Significance: 1e-58; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 43 - 212
Target Start/End: Original strand, 8054875 - 8055057
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaat 142  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||     
T  8054875 atagaaaaacgagttagagggataattttgggtcaaaaattgaccctaaatcacccctccaacgaaaagaagaaaggagtgacggctagggtttgagaag 8054974  T
Q  143 gagataagagaaagag-------------aaaaaggcttgatatctttatcaaatttagttttaaaaattcattcaaacatct 212  Q
    ||||||||||||||||             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8054975 gagataagagaaagagaaaaaaggcttaaaaaaaagcttgatatctttatcaaatttagttttaaaaattcattcaaacatct 8055057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 9992710 - 9992656
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccc 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9992710 agaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccc 9992656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 16937406 - 16937464
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16937406 atagaaaaacaagttagagggatgattttggatcaaaaattgaccctaaatcacccctc 16937464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 31874128 - 31874077
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31874128 gaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacc 31874077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 44295360 - 44295305
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  44295360 gaaaaacaagttagagagatgattttgggtcaaaaattgaccctaaatcacccctc 44295305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 10042804 - 10042750
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  10042804 aaaaacgagttagaggggtgattttgggtcaaaaattgaccataaatcacccctc 10042750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 9270066 - 9270010
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||    
T  9270066 agaaaaacgagttagaggggtgattttgggtcaaaaattgatcataaatcacccctc 9270010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32104841 - 32104882
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32104841 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 32104882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 15665584 - 15665528
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||| |||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  15665584 agaaaaacaagttagaggggtgattttgtgtcaaaagttgaccctaaatcacccctc 15665528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 37659009 - 37658955
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| | |||||||| |||||||| ||||||||||||||||||||||||||||    
T  37659009 aaaaacaaattagaggggtgattttgtgtcaaaaattgaccctaaatcacccctc 37658955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41996656 - 41996615
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  41996656 acgatgaaatcacaaaataaaaaacgtaacagatgtgaaaat 41996615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 36545850 - 36545906
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| |||| |||||||| ||||||||| ||||||| |||||    
T  36545850 agaaaaacgagttagaggggtgatattgggtcacaaattgaccttaaatcatccctc 36545906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 5989675 - 5989624
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcac 96  Q
    |||||||||||||||||   ||||||||||| ||||||||||||||||||||    
T  5989675 agaaaaacgagttagagatgtgattttgggttaaaaattgaccctaaatcac 5989624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 32256792 - 32256847
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaa-attgaccctaaatcacccctc 101  Q
    |||||| |||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  32256792 aaaaacaagttagaggggtgattttgggtaaaaaaattgaccctaaatcacccctc 32256847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8054810 - 8054852
Alignment:
Q  1 acgacgaaatcacaaaat-aaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  8054810 acgacgaaatcacaaaataaaaaaacgtaacagatgtgaaaat 8054852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 1810337 - 1810421
Alignment:
Q  68 ttttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgagataagaga 153  Q
    ||||||||||||| ||||||||||||||||||||  |  | ||||||||| |  ||||| |||||||||| ||| |||||||||||    
T  1810337 ttttgggtcaaaa-ttgaccctaaatcacccctctaaaaagaagaagaaaagggtgacgactagggtttgggaaggagataagaga 1810421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 12329628 - 12329556
Alignment:
Q  78 aaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgagataagaga 153  Q
    ||||||||| ||||||||||| ||   ||||||||||||| || |||||| ||||||||||||| |||| ||||||    
T  12329628 aaaattgactctaaatcacccatc---tgaaaagaagaaatgagtgacggttagggtttgagaaggagagaagaga 12329556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 26937567 - 26937514
Alignment:
Q  48 aaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||| |||||||| ||||||| || ||||||||| |||||||    
T  26937567 aaaacgagttagaggggtgattttgagtcaaaacttaaccctaaataacccctc 26937514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5457182 - 5457150
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacaga 33  Q
    |||||||||||||||||||||||||||||||||    
T  5457182 acgacgaaatcacaaaataaaaaacgtaacaga 5457150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 14115875 - 14115914
Alignment:
Q  58 agagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  14115875 agagggatgattttgggtcaaaaattga-cctaaatcaccc 14115914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 14530977 - 14531033
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| ||||| || |||||| | ||||||||||||||||||| ||||||||    
T  14530977 agaaaaacgatttagaagggtgatttggagtcaaaaattgaccctaaaccacccctc 14531033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 27534480 - 27534524
Alignment:
Q  57 tagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||| ||||| || |||||||||||||||||||||||||||    
T  27534480 tagagggacgatttgggatcaaaaattgaccctaaatcacccctc 27534524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 41996567 - 41996511
Alignment:
Q  90 aaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgaga 146  Q
    ||||||||||||||| |||||||||||| || ||||||||||| ||| |||| ||||    
T  41996567 aaatcacccctccgacgaaaagaagaaatgagtgacggctaggatttaagaaggaga 41996511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16996891 - 16996930
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  16996891 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 16996930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 7269535 - 7269585
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||| ||||||||| || |||||| ||||||||||||||| ||||||||||    
T  7269535 aaaagcgagttagaagggtgatttagggtcaaaaattgactctaaatcacc 7269585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 9270129 - 9270091
Alignment:
Q  4 acgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  9270129 acgaaatcacaaaataaaaaacgaaatagatgtgaaaat 9270091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 9501557 - 9501503
Alignment:
Q  109 aagaagaaaggaatgacggctagggtttgagaatgagataagagaaagagaaaaa 163  Q
    ||||||||| | ||||||||||||||||||||| |||| ||||||| | ||||||    
T  9501557 aagaagaaaaggatgacggctagggtttgagaaggagagaagagaaggggaaaaa 9501503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 13977448 - 13977390
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||| ||||| || | ||||||||| |||| |||||| |||||||||||||    
T  13977448 atagaaaaacgaattagatgggtaattttgggtaaaaatttgaccataaatcacccctc 13977390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 15237706 - 15237756
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatca 95  Q
    |||||||||||||||| || |||||| | || |||||||||||||||||||    
T  15237706 agaaaaacgagttagatgggtgatttagagttaaaaattgaccctaaatca 15237756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 23766787 - 23766736
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcac 96  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||| ||||||||    
T  23766787 atagaaaaacgagttatggg--tgattttgggtcaaaaattgaccttaaatcac 23766736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3681034 - 3680993
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||| |||||||||||||||||||| || ||||||||||||    
T  3681034 acgacaaaatcacaaaataaaaaacgaaatagatgtgaaaat 3680993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5989741 - 5989700
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||| |||||||||||||||||||| || ||||||||||||    
T  5989741 acgacaaaatcacaaaataaaaaacgaaatagatgtgaaaat 5989700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 11655979 - 11656032
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||| || |  |||||| |||||||||||||| ||||||||||||    
T  11655979 agaaaaacgagttggaagagtgatttcgggtcaaaaattgatcctaaatcaccc 11656032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31147804 - 31147845
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||| || || ||||||||||||    
T  31147804 acgacgaaatcacaaaataaaaagcgaaatagatgtgaaaat 31147845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 31202420 - 31202371
Alignment:
Q  109 aagaagaaaggaatgacggctagggtttgagaatgagataagagaaagag 158  Q
    |||||||||||  |||||||||||||||||||| || | |||||||||||    
T  31202420 aagaagaaaggggtgacggctagggtttgagaaggatagaagagaaagag 31202371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36545784 - 36545825
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||| |||||||||||||||||||| || ||||||||||||    
T  36545784 acgacaaaatcacaaaataaaaaacgaaatagatgtgaaaat 36545825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44295427 - 44295386
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  44295427 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 44295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 284544 - 284596
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||||||||| || | | ||||||||||||||||||| | |||||||||    
T  284544 agaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatcacc 284596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 631333 - 631281
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||||||||| || | | ||||||||||||||||||| | |||||||||    
T  631333 agaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatcacc 631281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 817145 - 817093
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||||||||| || | | ||||||||||||||||||| | |||||||||    
T  817145 agaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatcacc 817093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 14327524 - 14327468
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||  | ||||| ||| || ||||||||||||||||||||| ||||||||    
T  14327524 agaaaaacgatatggaggggtgaattggggtcaaaaattgaccctaaaccacccctc 14327468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 95
Target Start/End: Original strand, 31147891 - 31147919
Alignment:
Q  67 attttgggtcaaaaattgaccctaaatca 95  Q
    |||||||||||||||||||||||||||||    
T  31147891 attttgggtcaaaaattgaccctaaatca 31147919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 32061835 - 32061783
Alignment:
Q  49 aaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| ||||| || |||||| |||||||||||||||||||||  |||||||    
T  32061835 aaacgatttagaagggtgatttggggtcaaaaattgaccctaaactacccctc 32061783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 32920697 - 32920641
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||| | |||||| ||| |||| |||||||||||| ||||||||    
T  32920697 agaaaaacgatttagagcggtgatttaggggcaaagattgaccctaaaccacccctc 32920641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 7640423 - 7640544
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaat 142  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||     
T  7640423 atagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctccaacgaaaagaagaaaggagtgacggctagggtttgagaag 7640522  T
Q  143 gagataagagaaagagaaaaag 164  Q
    |||| |||||||||||||||||    
T  7640523 gagagaagagaaagagaaaaag 7640544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 5930468 - 5930416
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5930468 agaaaaacgagttagagggatgattttgggtcaaaaattaaccctaaatcacc 5930416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 3390476 - 3390421
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  3390476 gaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 3390421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 25771489 - 25771434
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  25771489 gaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 25771434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 6089940 - 6089882
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  6089940 atagaaaaacgaattagaggggtgattttgggtcaaaaattgaccttaaatcacccctc 6089882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 25516541 - 25516483
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  25516541 atagaaaaatgagttagaggggtgattttgggtcaaatattgaccctaaatcacccctc 25516483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 27191402 - 27191460
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  27191402 atagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcatccctc 27191460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 27841216 - 27841274
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  27841216 atagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcatccctc 27841274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 40125436 - 40125378
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  40125436 atagaaaaacaagttagaggggtgattttgggtcaaaaattaaccctaaatcacccctc 40125378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 42105819 - 42105877
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  42105819 atagaaaaacgagttagagtggtgattttgggtcaaaaattgaccctaaagcacccctc 42105877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 44167776 - 44167834
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  44167776 atagaaaaacgagttagaggggtgattttgggtcaaaaattgaccatatatcacccctc 44167834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 10589081 - 10589028
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccct 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  10589081 aaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccct 10589028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 3465006 - 3464948
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||| | | ||||||||| |||||||||||||||||||||||||||    
T  3465006 atagaaaaacgagttagtgtggtgattttggatcaaaaattgaccctaaatcacccctc 3464948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 15674045 - 15674099
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  15674045 aaaaacaagttagaggagtgattttgggtcaaaaattgaccctaaatcacccctc 15674099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 37883700 - 37883642
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  37883700 atagaaaaacgaattagaggggtgattttggattaaaaattgaccctaaatcacccctc 37883642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 41176905 - 41176851
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||| || || ||||||||||||||||||||||||||||||||||    
T  41176905 aaaaacgagttagatgggtggttttgggtcaaaaattgaccctaaatcacccctc 41176851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 43566922 - 43566866
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  43566922 atagaaaaacgagttagaggg-tgattttgggtcaaaaattgaccct-aatcacccctc 43566866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7640359 - 7640400
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7640359 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 7640400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 27024209 - 27024261
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  27024209 gaaaaacaagttagaggggtgattttgggtcaaaaaatgaccctaaatcaccc 27024261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 29812684 - 29812736
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  29812684 agaaaaatgagttagaggggtgattttgtgtcaaaaattgaccctaaatcacc 29812736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 9715616 - 9715667
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  9715616 aaaaacgagttggagagatgattttggatcaaaaattgaccctaaatcaccc 9715667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 16880029 - 16880084
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||| |||||| |||||||||||||||||||||||  ||||||||||||    
T  16880029 gaaaaacgagtgagaggggtgattttgggtcaaaaattgaccaaaaatcacccctc 16880084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 19581074 - 19581128
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||| |||||||| || |||||||||||| ||||||||||||    
T  19581074 aaaaacgagttagaggggtgattttgtgttaaaaattgacccaaaatcacccctc 19581128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43929359 - 43929400
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  43929359 acgacgaaatcacaaaataaaaaacgtaacatatgtgaaaat 43929400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 5754309 - 5754207
Alignment:
Q  59 gagggatgatttt-gggtcaaaaattgaccctaaatcacccctccgat--gaa-aagaagaaaggaatgacggctagggtttgagaatgagataagagaa 154  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||  |   ||| |||||||||   |||||||||||||||||||||||||| ||||||     
T  5754309 gagggatgatttttgggtcaaaa-ttgaccctaaatcacccctctaaaaagaagaagaagaaaatgatgacggctagggtttgagaatgagagaagagag 5754211  T
Q  155 agag 158  Q
    ||||    
T  5754210 agag 5754207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 41797617 - 41797535
Alignment:
Q  78 aaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgagataagagaaagagaaaaa 163  Q
    |||||| |||||||||||||||||   ||| ||||| |||||  | ||||||||||||||||||||||| ||||||  ||||||||    
T  41797617 aaaattaaccctaaatcacccctc---tgacaagaaaaaaggggtaacggctagggtttgagaatgagagaagagagggagaaaaa 41797535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 26491350 - 26491292
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||| |||||| |||| ||||||||||||||||||||| | ||||| |||||||    
T  26491350 atagaaaaatgagttaaaggggtgattttgggtcaaaaattgaacttaaattacccctc 26491292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 36507978 - 36507924
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    ||||||||| |||| |||| | ||||||||||||||||||||||||||| |||||    
T  36507978 atagaaaaatgagtcagagaggtgattttgggtcaaaaattgaccctaagtcacc 36507924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5930534 - 5930493
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  5930534 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 5930493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9715547 - 9715588
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  9715547 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 9715588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 41841995 - 41841938
Alignment:
Q  45 agaaaaacgagttagagggatgatttt-gggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||| |||| ||||||| |||||||||||||||| ||||||| |||||    
T  41841995 agaaaaacgagttaaaggggtgatttttgggtcaaaaattgaccataaatcaaccctc 41841938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 25623114 - 25623170
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||| | || |||||||||||||||||||||   |||||||||||||    
T  25623114 agaaaaacgagttatatgggtgattttgggtcaaaaattgataataaatcacccctc 25623170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27191339 - 27191378
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  27191339 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 27191378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27841153 - 27841192
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  27841153 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 27841192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 43566985 - 43566946
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  43566985 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 43566946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 44167713 - 44167752
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  44167713 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 44167752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3465068 - 3465030
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaa 39  Q
    |||||||||||||||||||||||||| || |||||||||    
T  3465068 acgacgaaatcacaaaataaaaaacgaaatagatgtgaa 3465030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3390543 - 3390502
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  3390543 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 3390502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25771556 - 25771515
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  25771556 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 25771515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27024142 - 27024183
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  27024142 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 27024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 5071439 - 5071495
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| ||||| || ||||||  ||||||||||||||| |||| ||||||||    
T  5071439 agaaaaacgatttagaagggtgatttaaggtcaaaaattgaccataaaccacccctc 5071495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 17037738 - 17037774
Alignment:
Q  65 tgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||||||||||  ||||||||||||    
T  17037738 tgattttgggtcaaaaattgaccaaaaatcacccctc 17037774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 19953405 - 19953373
Alignment:
Q  69 tttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| |||||||||||||    
T  19953405 tttgggtcaaaaattgaccataaatcacccctc 19953373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 34416995 - 34417063
Alignment:
Q  78 aaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgaga 146  Q
    |||||||||| |||||||||||||  |  | ||| |||||||| |||||| ||||||||||||| ||||    
T  34416995 aaaattgaccttaaatcacccctctaaaaagaagtagaaaggagtgacggttagggtttgagaaggaga 34417063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 35353677 - 35353641
Alignment:
Q  65 tgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  35353677 tgatttggggtcaaaaattgaccctaaaccacccctc 35353641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 5e-46; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 19759835 - 19759710
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaat 142  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| || |||||||||     
T  19759835 atagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctccgacgaaaagaagaaaggagtgacggcaagagtttgagaag 19759736  T
Q  143 gagataagagaaagagaaaaaggctt 168  Q
    |||| |||||||||||||||| ||||    
T  19759735 gagagaagagaaagagaaaaatgctt 19759710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 16913372 - 16913317
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  16913372 gaaaaacgagttagaggggtgatttcgggtcaaaaattgaccctaaatcacccctc 16913317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 12576545 - 12576603
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  12576545 atagaaaaacaagttagaggggtgatttagggtcaaaaattgaccctaaatcacccctc 12576603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 32457691 - 32457635
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  32457691 agaaaaacgagttagatgggtgattttgggtcaaaaattgacgctaaatcacccctc 32457635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 548934 - 548990
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||    
T  548934 agaaaaacgagttagaggggtgattttgggtcaaaaattgaccttatatcactcctc 548990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 32804337 - 32804286
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  32804337 aaaaatgagttagatgggtgattttgggtcaaaaattgaccctaaatcaccc 32804286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 4663891 - 4663945
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||    
T  4663891 aaaaacgtgttagaggggtgattttgggtcaaaaattgacccacaatcacccctc 4663945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 20845053 - 20845011
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgacc 87  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  20845053 agaaaaacgagttagaggggtgattttgggtcaaaaattgacc 20845011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23843427 - 23843468
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  23843427 acgacgaaatcacaaaataaaaaacgtaaaagatgtgaaaat 23843468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 13234177 - 13234232
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| ||||| || ||||||| |||||||||||||||||||||||||||||    
T  13234177 agaaaaacgaattagaagg-tgattttaggtcaaaaattgaccctaaatcacccctc 13234232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 10744622 - 10744571
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    |||||| |||||||||  |||||||||||||||| |||||||||||||||||    
T  10744622 aaaaacaagttagaggagtgattttgggtcaaaagttgaccctaaatcaccc 10744571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 19759897 - 19759858
Alignment:
Q  3 gacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  19759897 gacgaaatcacaaaataaaaaacgtaacaaatgtgaaaat 19759858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 15128218 - 15128260
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgacc 87  Q
    ||||||||||||||||||| |||||||||| ||||||||||||    
T  15128218 agaaaaacgagttagaggggtgattttgggacaaaaattgacc 15128260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16913439 - 16913398
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  16913439 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 16913398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 891633 - 891581
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||||||||| |||| | |||||||||||||||| |||||| |||||||    
T  891633 agaaaaacgagttataggggtaattttgggtcaaaaatcgacccttaatcacc 891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 32574498 - 32574446
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||| |||||||||||| | |||||||||||||||||||| ||||| ||||    
T  32574498 agaaaagcgagttagagggttaattttgggtcaaaaattgactctaaaacacc 32574446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 33194650 - 33194598
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||||| ||||||   ||||||||| |||||||||||||||||||||||    
T  33194650 agaaaaacgaattagagatgtgattttggatcaaaaattgaccctaaatcacc 33194598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 34020651 - 34020607
Alignment:
Q  57 tagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||    
T  34020651 tagatggatgatgttgggtcaaaaattgaccctaaaccacccctc 34020607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 7049278 - 7049236
Alignment:
Q  59 gagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||    
T  7049278 gaggggtgattttgagtcaaaagttgaccctaaatcacccctc 7049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33194716 - 33194674
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaata 43  Q
    |||||||||||||||||||||||||  || |||||||||||||    
T  33194716 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaata 33194674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 1302696 - 1302647
Alignment:
Q  109 aagaagaaaggaatgacggctagggtttgagaatgagataagagaaagag 158  Q
    |||||||||||  |||||||||||||||||||| |||| |||||| ||||    
T  1302696 aagaagaaaggggtgacggctagggtttgagaaggagaaaagagagagag 1302647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 8644270 - 8644237
Alignment:
Q  65 tgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||| ||||||||||||||||||||||||||    
T  8644270 tgatttttggtcaaaaattgaccctaaatcaccc 8644237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13234111 - 13234152
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  13234111 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 13234152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 21326520 - 21326395
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaat 142  Q
    ||||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||| | ||||||||||||| | ||||||||||||||||||||     
T  21326520 atagaaaaacgagttagaggggtgatttttgttcaaaaattgatcctaaatcacccctccaacgaaaagaagaaagaagtgacggctagggtttgagaaa 21326421  T
Q  143 gagataagagaaagagaaaaaggctt 168  Q
    |||| |||||||||||||||||||||    
T  21326420 gagagaagagaaagagaaaaaggctt 21326395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 44562816 - 44562883
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaa 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||    
T  44562816 atagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccatccgacgaaaa 44562883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 5832280 - 5832164
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaa------aagaagaaaggaatgacggctagggttt 136  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||  |  ||      |||||||||||| |||||||||||||||    
T  5832280 atagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcacccctcttacaaaaagaagaagaagaaaggagtgacggctagggttt 5832181  T
Q  137 gagaatgagataagaga 153  Q
     |||| |||| ||||||    
T  5832180 aagaaggagagaagaga 5832164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 52839466 - 52839412
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  52839466 aaaaacgagttagaagggtgattttgggtcaaaaattgaccctaaatcacccctc 52839412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 630852 - 630909
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccct 100  Q
    |||||||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  630852 atagaaaaacgagttagatgggtgatttagggtcaaaaattgaccctaaatcacccct 630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 23320487 - 23320376
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaat 142  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||| || |           ||||||||||||||| ||||| ||||||||||||||     
T  23320487 atagaaaaacgagttagaggggtgattttgggtcaaaaatc-accctcaaac-----------gaaaagaagaaaggagtgacgactagggtttgagaag 23320400  T
Q  143 gagataagagaaagagaaaaaggc 166  Q
    |||| |||||||||||||||||||    
T  23320399 gagagaagagaaagagaaaaaggc 23320376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 17579813 - 17579757
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  17579813 agaaaaatgagttagagggatgattttggttcaaaaattgaccctaagtcacccctc 17579757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 6212956 - 6213011
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  6212956 gaaaaacgagttagaggtgtgattttgggtcaaaaattgaccataaatcacccctc 6213011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 22344982 - 22345037
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||    
T  22344982 gaaaaacaagttagaggggtgattttgggtcaaaaattgaacctaaatcacccctc 22345037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 13691827 - 13691881
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccc 99  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  13691827 agaaaaacgatttagaggggtgattttgggtcaaaaattgaccctaaaccacccc 13691881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23320551 - 23320510
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23320551 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 23320510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 44514061 - 44514115
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| ||||| || | |||||||||||||||||||||||||||||||||||||    
T  44514061 aaaaacaagttaaagaggtgattttgggtcaaaaattgaccctaaatcacccctc 44514115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 52839564 - 52839510
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||| || ||||||||||||||||||||| | |||||||||||||    
T  52839564 aaaaacgagttagaagggtgattttgggtcaaaaattgatcataaatcacccctc 52839510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 14717312 - 14717367
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  14717312 agaaaaacgagttagaggg-tgaatttaagtcaaaaattgaccctaaatcacccctc 14717367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 38646629 - 38646573
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||| | || ||||||||||||||||||||||| |||||||| ||||    
T  38646629 agaaaaacgagttacatgggtgattttgggtcaaaaattgaccataaatcactcctc 38646573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 44562754 - 44562793
Alignment:
Q  3 gacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  44562754 gacgaaatcacaaaatataaaacgtaacagatgtgaaaat 44562793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 45659087 - 45659041
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaa 91  Q
    |||||||||||||||||   |||||||||||||||||||||||||||    
T  45659087 agaaaaacgagttagagcagtgattttgggtcaaaaattgaccctaa 45659041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 900233 - 900192
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  900233 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 900192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1768077 - 1768036
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  1768077 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 1768036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15698311 - 15698270
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  15698311 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 15698270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 46589217 - 46589165
Alignment:
Q  48 aaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||| |||||||| |||||||||||| | |||||||||||||    
T  46589217 aaaacgagttagaggg-tgattttgagtcaaaaattgatcataaatcacccctc 46589165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 8893338 - 8893294
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccct 89  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  8893338 agaaaaacgagttagaagggtgattttgggtcaaaaattaaccct 8893294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 15791607 - 15791675
Alignment:
Q  78 aaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgaga 146  Q
    |||||||| ||||||||| ||||||||  | ||||||||||  |||||| |||||||||||||| ||||    
T  15791607 aaaattgatcctaaatcagccctccgacaagaagaagaaagagatgacgactagggtttgagaaggaga 15791675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 51417972 - 51417928
Alignment:
Q  109 aagaagaaaggaatgacggctagggtttgagaatgagataagaga 153  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||||    
T  51417972 aagaagaaagggatgacggttagggtttgagaaggagataagaga 51417928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4564628 - 4564589
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  4564628 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 4564589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 33177667 - 33177722
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctcc 102  Q
    ||||| |||||||| ||||||||||| ||||||||||  || ||||||||||||||    
T  33177667 aaaaaggagttagatggatgattttgagtcaaaaattagccataaatcacccctcc 33177722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 100
Target Start/End: Original strand, 48655155 - 48655190
Alignment:
Q  65 tgattttgggtcaaaaattgaccctaaatcacccct 100  Q
    |||||||||||||||||||||| |||||||||||||    
T  48655155 tgattttgggtcaaaaattgactctaaatcacccct 48655190  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 12148115 - 12148169
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    ||||||||||||||||||| | |  |||||||||||||| |||| ||||||||||    
T  12148115 atagaaaaacgagttagagtggtatttttgggtcaaaaactgacgctaaatcacc 12148169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 22032169 - 22032215
Alignment:
Q  56 ttagagggatgatttt-gggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||| ||||||| |||||||||||||||||||||||| |||||    
T  22032169 ttagaggggtgatttttgggtcaaaaattgaccctaaatcatccctc 22032215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27469711 - 27469753
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaata 43  Q
    ||||||||||||||||| |||||||| || |||||||||||||    
T  27469711 acgacgaaatcacaaaagaaaaaacgaaatagatgtgaaaata 27469753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 35077959 - 35078009
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatca 95  Q
    ||||||||||||||||| | |||||||||||||||| |||| | |||||||    
T  35077959 agaaaaacgagttagagaggtgattttgggtcaaaatttgatcataaatca 35078009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 37685168 - 37685206
Alignment:
Q  48 aaaacgagttagagggatgattttgggtcaaaaattgac 86  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  37685168 aaaacgagttagaggattgattttgggtcaaaaattgac 37685206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 37700350 - 37700312
Alignment:
Q  48 aaaacgagttagagggatgattttgggtcaaaaattgac 86  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  37700350 aaaacgagttagaggattgattttgggtcaaaaattgac 37700312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 8937648 - 8937612
Alignment:
Q  61 gggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8937648 gggatgattttgggtcaaaa-ttgaccctaaatcaccc 8937612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 10877391 - 10877338
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggt-caaaaattgaccctaaatcacc 97  Q
    ||||||||||||||||||  |||||||||||  ||||||||||| |||||||||    
T  10877391 agaaaaacgagttagaggtgtgattttgggtaaaaaaattgaccataaatcacc 10877338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15276453 - 15276494
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  15276453 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 15276494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21326584 - 21326543
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||  ||||||||||||| |||||||||||||||    
T  21326584 acgacgaaatcgtaaaataaaaaacgcaacagatgtgaaaat 21326543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22344915 - 22344956
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  22344915 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 22344956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 28678295 - 28678344
Alignment:
Q  109 aagaagaaaggaatgacggctagggtttgagaatgagataagagaaagag 158  Q
    |||||||||||  |||||||||||||||||||| |||| |||||| ||||    
T  28678295 aagaagaaaggggtgacggctagggtttgagaaggagagaagagagagag 28678344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 32784119 - 32784047
Alignment:
Q  68 ttttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaa 141  Q
    ||||||||||||| |||||||||||||||||||  ||  | |||||||||||  |||| ||| |||||||||||    
T  32784119 ttttgggtcaaaa-ttgaccctaaatcacccctttgaaaagaagaagaaaggggtgacagctggggtttgagaa 32784047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40488400 - 40488441
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||| |||||||| || ||||||||||||    
T  40488400 acgacgaaatcacaaaagaaaaaacgaaatagatgtgaaaat 40488441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 45659153 - 45659112
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  45659153 acgacgaaatcacaaaataaaaaatgaaatagatgtgaaaat 45659112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 37825474 - 37825518
Alignment:
Q  109 aagaagaaaggaatgacggctagggtttgagaatgagataagaga 153  Q
    ||||||||| || |||||||||||||||||||| |||| ||||||    
T  37825474 aagaagaaaagagtgacggctagggtttgagaaggagagaagaga 37825518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 42276377 - 42276298
Alignment:
Q  59 gagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgag 139  Q
    ||||| |||||||| |||||||||  ||||||||||||||||| ||  | ||||||||| |  ||||| ||||||||||||    
T  42276377 gaggggtgattttgtgtcaaaaata-accctaaatcacccctctgaaaagaagaagaaaagggtgacgactagggtttgag 42276298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 5593 - 5718
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaat 142  Q
    |||||||||||||||| ||||   |||||| |||||||||||||||||||| ||| |||||||||||||||||||| | ||| |||||  ||||||||||    
T  5593 atagaaaaacgagttaaaggggcaattttgagtcaaaaattgaccctaaataacctctccgatgaaaagaagaaagaagtgatggctaaagtttgagaat 5692  T
Q  143 gagataagagaaagagaaaaaggctt 168  Q
    |||| |||||||||||||||||||||    
T  5693 gagagaagagaaagagaaaaaggctt 5718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5529 - 5570
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  5529 acgacgaaatcacaaaataaaaaacataacagatgtgaaaat 5570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 4726995 - 4727118
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaat 142  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||  |||||||| ||||| ||| ||||||||||||||       
T  4726995 atagaaaaacgagttatatggatgattttgggtcaaaaattgaccctaaattacccctccgacaaaaagaag-aaggagtgatggctagggtttgag--- 4727090  T
Q  143 gagataagagaaagagaaaaaggcttga 170  Q
    |||| |||||||||||||||||||||||    
T  4727091 gagagaagagaaagagaaaaaggcttga 4727118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 34893985 - 34894041
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  34893985 agaaaaacgagttagaggggtgattttgggtcaaaaattgaccgtaaatcacccctc 34894041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 28618651 - 28618593
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  28618651 atagaaaaacgagttagaggggtgattttgggttaaaaattgaccttaaatcacccctc 28618593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 9035017 - 9035073
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||||||||||||||| |||||||||||| | |||||||||||||    
T  9035017 agaaaaacgagttagagggatgattttgagtcaaaaattgatcataaatcacccctc 9035073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 6887248 - 6887303
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  6887248 gaaaaacaagttagaggggtgattttgggttaaaaattgaccctaaatcacccctc 6887303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 31645873 - 31645818
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  31645873 gaaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctc 31645818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 29310420 - 29310474
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  29310420 aaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctc 29310474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 33486641 - 33486695
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| ||||||| || |||||||||||||||||||||||||||||||||||||    
T  33486641 aaaaacaagttagatgggtgattttgggtcaaaaattgaccctaaatcacccctc 33486695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 4070601 - 4070545
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccct 100  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  4070601 atagaaaaacgagtcagaggggtgattttgggtcaaaaa-tgaccctaaatcacccct 4070545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 41358084 - 41358031
Alignment:
Q  45 agaaaaacgagttagaggga-tgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  41358084 agaaaaacgagttagagggggtgattttgggtcaaaaattgaccctaaatcacc 41358031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 2415445 - 2415393
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  2415445 agaaaaacaagttagaagggtgattttgggtcaaaaattgaccctaaatcacc 2415393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 18472796 - 18472843
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatc 94  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  18472796 aaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatc 18472843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 41554529 - 41554475
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  41554529 aaaaacaagttagaggggtgattttggatcaaaaattgatcctaaatcacccctc 41554475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 37425035 - 37424982
Alignment:
Q  48 aaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||  ||||||||||||| ||||||||| |||||||||||||    
T  37425035 aaaacgagttagaggcgtgattttgggtcagaaattgaccataaatcacccctc 37424982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 19646110 - 19646166
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||| |||| ||||||||    
T  19646110 agaaaaatgagttagaggggtgattttgggtcaaacattgaccttaaaccacccctc 19646166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 41988229 - 41988173
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||||||  |||||||  ||||||||||| |||||||||||||||    
T  41988229 agaaaaacgagttagaggggcgattttgaatcaaaaattgatcctaaatcacccctc 41988173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 6647983 - 6648038
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||||  |||||||||||||||| |||||| |||||| ||||||    
T  6647983 gaaaaacgagttagaggagtgattttgggtcaaaatttgaccataaatcgcccctc 6648038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4726931 - 4726972
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  4726931 acgacgaaatcacaaaataagaaatgtaacagatgtgaaaat 4726972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 8812231 - 8812276
Alignment:
Q  55 gttagagggatgattttgggtcaaaaattgaccctaaatcacccct 100  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||    
T  8812231 gttagaggggtgattttgggttaaaaattgaccctatatcacccct 8812276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41063399 - 41063440
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  41063399 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 41063440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 5378313 - 5378254
Alignment:
Q  110 agaagaaaggaatgacgg-ctagggtttgagaatgagataagagaaagagaaaaaggctt 168  Q
    ||||||||||| |||||| ||||||||||||||  ||| ||| |||||||||||||||||    
T  5378313 agaagaaaggagtgacgggctagggtttgagaagcagagaagtgaaagagaaaaaggctt 5378254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 32390652 - 32390691
Alignment:
Q  3 gacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  32390652 gacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 32390691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10924136 - 10924177
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || |||||| |||||    
T  10924136 acgacgaaatcacaaaataaaaaacgaaatagatgtaaaaat 10924177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28500828 - 28500787
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||| ||||||||||||||||||||| || ||||||||||||    
T  28500828 acgaagaaatcacaaaataaaaaacgaaatagatgtgaaaat 28500787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 34873905 - 34873848
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaa-ttgaccctaaatcacccctcc 102  Q
    ||||||||||||||| || ||||||| | | ||||| |||||||||||||||||||||    
T  34873905 gaaaaacgagttagaagggtgattttcgataaaaaaattgaccctaaatcacccctcc 34873848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 6682030 - 6682082
Alignment:
Q  109 aagaagaaaggaatgacggctagggtttgagaatgagataagagaaagagaaa 161  Q
    ||||||||||| ||||||| | |||||||||||  |||||||||| |||||||    
T  6682030 aagaagaaagggatgacggttggggtttgagaagtagataagagagagagaaa 6682082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 15710587 - 15710532
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggt--caaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||| ||||||||| |   ||||||||||| ||||||||||    
T  15710587 agaaaaacgagttagaggggtgattttggataaaaaaaattgaccataaatcaccc 15710532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 22397619 - 22397667
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatca 95  Q
    ||||||||||||||  ||||||||| | ||||| |||||||||||||||    
T  22397619 aaaaacgagttagattgatgattttcgatcaaatattgaccctaaatca 22397667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 39179987 - 39180027
Alignment:
Q  122 tgacggctagggtttgagaatgagataagagaaagagaaaa 162  Q
    ||||||||||||||||||||||||| |||||| ||| ||||    
T  39179987 tgacggctagggtttgagaatgagagaagagagagataaaa 39180027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 40565224 - 40565280
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||| | |||||| |||||||||||  |||||||| ||||||||    
T  40565224 agaaaaacgatttagagaggtgatttggggtcaaaaatcaaccctaaaccacccctc 40565280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 41063465 - 41063509
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccct 89  Q
    |||||||||||||||| |  |||||||| ||||||||||||||||    
T  41063465 agaaaaacgagttagatgagtgattttgagtcaaaaattgaccct 41063509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 1e-30; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 52555788 - 52555887
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaat 142  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||  ||| ||||||||||    
T  52555788 atagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctccgacgaaaagaagaaaggagtgacgattagagtttgagaat 52555887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 46717002 - 46717095
Alignment:
Q  75 tcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgagataagagaaagagaaaaaggctt 168  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||  |||||||| |||| |||||||||||||||||||||    
T  46717002 tcaaaaattgaccctaaatcacccatccgatgaaaagaagaaaggagtgacgactagaatttgagaaggagagaagagaaagagaaaaaggctt 46717095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 42972085 - 42971992
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggttt 136  Q
    |||||||||| ||||||| |  |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  42972085 atagaaaaacaagttagatgagtgattttgggtcaaaaattgaccctaaatcacccttccgacgaaaacaagaaaggagtgacggctagggttt 42971992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 23067915 - 23067974
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctcc 102  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  23067915 atagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcacccctcc 23067974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 28588606 - 28588553
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28588606 agaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcaccc 28588553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 9661898 - 9661842
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  9661898 agaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 9661842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 14542582 - 14542637
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  14542582 gaaaaacaagttagagagatgattttgggtcaaaaattgaccctaaatcacccctc 14542637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 54420779 - 54420834
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  54420779 atagaaaaacgagttagaggagtgattttgggtcaaaaattgaccctaaatcaccc 54420834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 16991919 - 16991865
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  16991919 atagaaaaacgagttagatgggtgattttgggtcaaaaattgaccctaaatcacc 16991865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 3673668 - 3673612
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||    
T  3673668 agaaaaacgatttagaggggtgatttggggtcaaaaattgaccctaaatcacccctc 3673612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 41486620 - 41486564
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  41486620 agaaaaacgagttagaggggtgattttggatcaaaaattgaccctaaataacccctc 41486564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 4634327 - 4634272
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  4634327 gaaaaacaagttagaggggtgattttgggtcaaaaattgaccttaaatcacccctc 4634272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 46728987 - 46729044
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||    
T  46728987 atagaaaaacaaattagaggg-tgattttgggtcaaaaattgaccctaaatcacccctc 46729044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 4959644 - 4959697
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  4959644 agaaaaatgagttagagtgatgattttggatcaaaaattgaccctaaatcaccc 4959697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23067851 - 23067892
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23067851 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 23067892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 1646010 - 1646060
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatca 95  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  1646010 agaaaaacgagttagaggggtgattttgggtcaacaattaaccctaaatca 1646060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 3169083 - 3169033
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  3169083 aaaaacgagttagaggggtgattttgggtcaataattgactctaaatcacc 3169033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 43156819 - 43156765
Alignment:
Q  48 aaaacgagttagagggatgattttgggtcaaaaattgaccc-taaatcacccctc 101  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  43156819 aaaacgtgttagaggggtgattttgggtcaaaaattgacccgtaaatcacccctc 43156765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 478121 - 478205
Alignment:
Q  68 ttttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgagataagaga 153  Q
    ||||||||||||| |||||| |||||||||||||  |  | |||||||||||  |||||||||||||||||||| |||| ||||||    
T  478121 ttttgggtcaaaa-ttgaccataaatcacccctctaaaaagaagaagaaaggggtgacggctagggtttgagaaggagagaagaga 478205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 1657650 - 1657691
Alignment:
Q  56 ttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  1657650 ttagaggggtgattttgggtcaaaaattgaccctaaatcacc 1657691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 5388560 - 5388504
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||||| ||||||  | |||||||||||||||||||||||||||    
T  5388560 agaaaaacgatttagaggggtgatttgagttcaaaaattgaccctaaatcacccctc 5388504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 34115721 - 34115769
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaat 93  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  34115721 agaaaaacgaactagaggggtgattttgggtcaaaaattgaccctaaat 34115769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 394384 - 394473
Alignment:
Q  68 ttttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgagataagagaaagagaaa 161  Q
    ||||||||||||| |||||||||||||||||||||    ||||||||||| |  ||||  |||||||||||||| |||| |||||| |||||||    
T  394384 ttttgggtcaaaa-ttgaccctaaatcacccctcc---aaaaagaagaaaagggtgacaactagggtttgagaaagagagaagagagagagaaa 394473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 7242838 - 7242893
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccct 100  Q
    |||||||| |||||||  | |||||||||||||||||||||||||||||| |||||    
T  7242838 agaaaaacaagttagaaaggtgattttgggtcaaaaattgaccctaaatcgcccct 7242893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 43244491 - 43244578
Alignment:
Q  68 ttttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaa---aggaatgacggctagggtttgagaatgagataagaga 153  Q
    ||||||||||||| ||||||||||||||||||||  |  ||||||||||   | | ||||||||||||||||||||| |||| ||||||    
T  43244491 ttttgggtcaaaa-ttgaccctaaatcacccctctaaaaaaaagaagaagaaaaggatgacggctagggtttgagaaagagagaagaga 43244578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 44375331 - 44375401
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaa 113  Q
    |||||||||||| |||||||  |||||||| |||||||||||||| |||||||| | || ||| |||||||    
T  44375331 atagaaaaacgaattagaggagtgattttgagtcaaaaattgaccttaaatcactcatctgataaaaagaa 44375401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9474542 - 9474583
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  9474542 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 9474583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 37869488 - 37869536
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcac 96  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  37869488 aaaaacgagttagagggatgatttt-ggtaaacaattgaccctaaatcac 37869536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42972149 - 42972108
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  42972149 acgacgaaaccacaaaataaaaaacgtaacaaatgtgaaaat 42972108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50003179 - 50003220
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  50003179 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 50003220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 52555724 - 52555765
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  52555724 acgacaaaatcacaaaataaaaaacgtaaaagatgtgaaaat 52555765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 4622780 - 4622836
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||| || || | ||||||||| ||||||||||||| |||||||||||||    
T  4622780 agaaaaacgagatacagaggtgattttggatcaaaaattgaccttaaatcacccctc 4622836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 11817117 - 11817061
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||  ||||||| |||||||||||||||| || |||||||| ||||||||    
T  11817117 agaaaaacgatgtagaggggtgattttgggtcaaaacttaaccctaaaccacccctc 11817061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 46775925 - 46775965
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattga 85  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  46775925 agaaaaacgagatagagtgatgattttgggtcaaaaattga 46775965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 29577154 - 29577209
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccct 100  Q
    ||||||||||| |||||||   |||||| |||||||| ||||||||||||||||||    
T  29577154 agaaaaacgagatagaggggatattttgagtcaaaaagtgaccctaaatcacccct 29577209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 46716899 - 46716938
Alignment:
Q  3 gacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  46716899 gacgaaatcacaaaataaaaaacgtaatagatgcgaaaat 46716938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 54420716 - 54420755
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  54420716 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 54420755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 1124979 - 1124929
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    ||||| |||||||| | ||||||||||||||||||||||  ||||||||||    
T  1124979 aaaaatgagttagatgaatgattttgggtcaaaaattgattctaaatcacc 1124929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 6408483 - 6408433
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||||||| || | ||||||||||| ||||||||||||| |||||||    
T  6408483 aaaaacgagttaaagaggtgattttgggtaaaaaattgacccttaatcacc 6408433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2945248 - 2945207
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||| ||||||||||||||||||||| || ||||||||||||    
T  2945248 acgatgaaatcacaaaataaaaaacgaaatagatgtgaaaat 2945207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9661964 - 9661923
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  9661964 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 9661923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12519767 - 12519726
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  12519767 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 12519726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14542515 - 14542556
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  14542515 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 14542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 24825599 - 24825562
Alignment:
Q  109 aagaagaaaggaatgacggctagggtttgagaatgaga 146  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  24825599 aagaagaaaggagtgacggctagggtttgagaaagaga 24825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 30416693 - 30416746
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccct 100  Q
    |||||| |||||||||  ||||||||| ||||||||||||| ||||| ||||||    
T  30416693 aaaaacaagttagaggtgtgattttggttcaaaaattgaccataaattacccct 30416746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41486686 - 41486645
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||| |||||||||||||||||||| || ||||||||||||    
T  41486686 acgacaaaatcacaaaataaaaaacgaaatagatgtgaaaat 41486645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44375267 - 44375308
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  44375267 acgacgaaatcacaaaataaaaaaagaaatagatgtgaaaat 44375308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 51646136 - 51646088
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatca 95  Q
    |||||||| |||||||| ||||||| ||| ||||||||||| |||||||    
T  51646136 aaaaacgaattagaggggtgattttaggttaaaaattgaccataaatca 51646088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 53903657 - 53903617
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaatt 83  Q
    ||||||||||||||||||||  |||||| ||||||||||||    
T  53903657 atagaaaaacgagttagaggagtgatttagggtcaaaaatt 53903617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 6e-30; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 43 - 141
Target Start/End: Original strand, 43807217 - 43807315
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaa 141  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||||| |||||||||||| || ||| ||||||||||||||||    
T  43807217 atagaaaaacgagttagagaggtgattttgggtcaaaaattgaccataaatcacctctccgacgaaaagaagaaaagagtgatggctagggtttgagaa 43807315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 30992890 - 30993008
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggttt--gaga 140  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||||||||||||| | |||| | ||||||||  ||||    
T  30992890 atagaaaaacaagttagaggggtgattttgggtcaaaaattaaccttaaatcacccctccgacgaaaagaagaaagaagtgacaggtagggtttgagaga 30992989  T
Q  141 atgagataagagaaagaga 159  Q
    | |||| ||||||||||||    
T  30992990 aggagagaagagaaagaga 30993008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 24470442 - 24470384
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  24470442 atagaaaaacgagttagaggggtgattttgggtcaaaaattgcccctaaatcacccctc 24470384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 24475390 - 24475332
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  24475390 atagaaaaacgagttagaggggtgattttgggtcaaaaattgcccctaaatcacccctc 24475332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 25855289 - 25855342
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25855289 agaaaaacgagttagagggatgattttggatcaaaaattgaccctaaatcaccc 25855342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 47749779 - 47749723
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  47749779 agaaaaacgagatagaggggtgattttgggtcaaaaattgaccataaatcacccctc 47749723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 40775311 - 40775256
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  40775311 gaaaaacgagttataggggtgattttggatcaaaaattgaccctaaatcacccctc 40775256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 49166974 - 49166919
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  49166974 atagaaaaacaagttagaggggtgattttaggtcaaaaattgaccctaaatcaccc 49166919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 7985937 - 7985883
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccc 99  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||    
T  7985937 agaaaaacgagttagagggatggttttaggtcaaaagttgaccctaaatcacccc 7985883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 8611689 - 8611747
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| |||| ||||||||||||  ||||||||||||||||||    
T  8611689 atagaaaaacgagttagaggggtgatattgggtcaaaaagagaccctaaatcacccctc 8611747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 28015399 - 28015345
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  28015399 aaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctc 28015345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26017661 - 26017702
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26017661 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 26017702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 47156437 - 47156388
Alignment:
Q  49 aaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  47156437 aaacgagttagagggatgattttggatcaaaaattgaccttaaatcaccc 47156388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 29804745 - 29804801
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||| ||||||||    
T  29804745 agaaaaacgatttagaggggtgatttggggtcaaaaattgaccctaaaccacccctc 29804801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 43483637 - 43483583
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| |||||||||||||||||| | |||||||||||||||||||||| ||||    
T  43483637 aaaaacaagttagagggatgattttagatcaaaaattgaccctaaatcactcctc 43483583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30992826 - 30992867
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  30992826 acgacaaaatcacaaaataaaaaacgtaacagatgtgaaaat 30992867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43807153 - 43807194
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  43807153 acgacgaaatcacaaaataaaatacgtaacagatgtgaaaat 43807194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 44681506 - 44681454
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  44681506 agaaaaacgagttagaggg-tgattttaggtcaaaaattgaacctaaatcaccc 44681454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 21990663 - 21990583
Alignment:
Q  78 aaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgagataagagaaagag 158  Q
    |||||||||||||||||||||||| ||  | ||  |||||||  |||||||||||||||||||| |||| |||||| ||||    
T  21990663 aaaattgaccctaaatcacccctctgaaaagaaagagaaaggggtgacggctagggtttgagaaggagagaagagagagag 21990583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 23732462 - 23732518
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||||   |||||||| |||||||||||||| |||||||||||||    
T  23732462 agaaaaacgagttagagaagtgattttgagtcaaaaattgaccttaaatcacccctc 23732518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 38649438 - 38649482
Alignment:
Q  56 ttagagggatgattttgggtcaaaaattgaccctaaatcacccct 100  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  38649438 ttagaggggtgattttgggtcaaaaattgactctaaatcacccct 38649482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 16263431 - 16263376
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||| | ||||||||| ||||||||||| |||||||||||||||    
T  16263431 gaaaaacaagttagagaggtgattttggatcaaaaattgatcctaaatcacccctc 16263376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 35141824 - 35141875
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||| |||||||| || ||||||| ||||||||||||||||||||||||||    
T  35141824 aaaaatgagttagaagggtgatttttggtcaaaaattgaccctaaatcaccc 35141875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 40761600 - 40761519
Alignment:
Q  68 ttttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgagataagaga 153  Q
    ||||||||||||| |||||||||||||| |||||   |||||||||||||||   ||||||||||||||| ||| |||| ||||||    
T  40761600 ttttgggtcaaaa-ttgaccctaaatcatccctc---tgaaaagaagaaaggggcgacggctagggtttgggaaggagagaagaga 40761519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 28665031 - 28665105
Alignment:
Q  78 aaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaatgagataagag 152  Q
    ||||||||||||||||||||| || ||  | |||||||||||  ||||||  ||||||||||||||||| |||||    
T  28665031 aaaattgaccctaaatcacccatctgacaagaagaagaaaggggtgacggtcagggtttgagaatgagagaagag 28665105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 21329368 - 21329420
Alignment:
Q  48 aaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||| ||||||||    
T  21329368 aaaacgatttagaggggtgattt-gggtcaaaaattgaccctaaaccacccctc 21329420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 33530537 - 33530591
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||| ||||||||| || |||||||||  |||||||||||||||||||||||    
T  33530537 agaaaaacgggttagaggggtggttttgggtc--aaattgaccctaaatcacccctc 33530591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 14734120 - 14734172
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||  |||||||| |||||| ||||||||||||||||||||| |||||    
T  14734120 gaaaaacgttttagaggggtgatttggggtcaaaaattgaccctaaaccaccc 14734172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 24045301 - 24045353
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    ||||||| | |||||| || ||||||||||||||||||||||| |||||||||    
T  24045301 agaaaaatgtgttagacgggtgattttgggtcaaaaattgaccttaaatcacc 24045353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24475453 - 24475414
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  24475453 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 24475414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 40476819 - 40476780
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  40476819 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 40476780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 8319357 - 8319303
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||| | || |||||||||||||||| |||||| |||||||| ||||    
T  8319357 aaaaacgagttacatgggtgattttgggtcaaaagttgaccataaatcactcctc 8319303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 10250549 - 10250603
Alignment:
Q  44 tagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||| |||||||| ||||||||| || ||||||||||||  |||||||    
T  10250549 tagaaaaacgaattagaggggtgattttggatcgaaaattgaccctttatcaccc 10250603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 42490747 - 42490713
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaa 79  Q
    ||||||||||||||||||| |||||||||||||||    
T  42490747 agaaaaacgagttagaggggtgattttgggtcaaa 42490713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 47749842 - 47749804
Alignment:
Q  4 acgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  47749842 acgaaatcacaaaataaaaaacgaaatagatgtgaaaat 47749804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23732396 - 23732437
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  23732396 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 23732437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40775378 - 40775337
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  40775378 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 40775337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 5025134 - 5025182
Alignment:
Q  54 agttagagggatgattttgggtc-aaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||||||||| |||||||||| | ||||||||||||    
T  5025134 agttagaggggtgattttgggtcaaaaaattgactcaaaatcacccctc 5025182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 11832983 - 11832939
Alignment:
Q  109 aagaagaaaggaatgacggctagggtttgagaatgagataagaga 153  Q
    ||||||||||  ||||||||||||||||||||| |||| ||||||    
T  11832983 aagaagaaagagatgacggctagggtttgagaaggagagaagaga 11832939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 26017729 - 26017777
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatca 95  Q
    |||||||| |||||||| ||||||| ||||||||||| ||| |||||||    
T  26017729 aaaaacgaattagaggggtgattttaggtcaaaaattaaccataaatca 26017777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 29804977 - 29805013
Alignment:
Q  65 tgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  29804977 tgatttggggtcaaaaattgaccctaaaccacccctc 29805013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 20201127 - 20201183
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20201127 agaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 20201183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 20203309 - 20203365
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20203309 agaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 20203365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 50519837 - 50519782
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50519837 atagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcaccc 50519782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 1165465 - 1165521
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  1165465 agaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 1165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 22286816 - 22286874
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||    
T  22286816 atagaaaaacgagttagaggggtaattttaggtcaaaaattgaccctaaatcacccctc 22286874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 41882475 - 41882533
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  41882475 atagaaaaacgagttagaggggtaattttgggtcaaaaattgaccctaaatcactcctc 41882533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 45664276 - 45664218
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  45664276 atagaaaaacgagttagaggggtgattttgggtcaaaatttgatcctaaatcacccctc 45664218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 35501828 - 35501881
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  35501828 agaaaaacgagttagaggggtgattttgggtcaaaaattaaccctaaatcaccc 35501881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 25374139 - 25374192
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  25374139 agaaaaacgagttagaggggtgattttaggtcaaaaattaaccctaaatcaccc 25374192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 1220284 - 1220340
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||    
T  1220284 agaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 1220340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 21803575 - 21803519
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||||| ||||    
T  21803575 agaaaaacgagttagaggggtgattttgggtcaaaaattgacactgaatcactcctc 21803519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 22844091 - 22844040
Alignment:
Q  50 aacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  22844091 aacgagttagaggggtgattttgggtcaaaaattgaccttaaatcagccctc 22844040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 43029727 - 43029672
Alignment:
Q  46 gaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  43029727 gaaaaacaagttagaggggtgattttgggtcaaaaaatgatcctaaatcacccctc 43029672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 53426849 - 53426799
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatca 95  Q
    ||||||||||||||||||| |||||||| || |||||||||||||||||||    
T  53426849 agaaaaacgagttagaggggtgattttgcgtaaaaaattgaccctaaatca 53426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 1806529 - 1806585
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||||| |||||| || |||||||||||||||||| ||||||||    
T  1806529 agaaaaacgatttagaggggtgatttgggatcaaaaattgaccctaaaccacccctc 1806585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 4019646 - 4019591
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||||    
T  4019646 agaaaaacgagttagagaggtgattttgagtcaaaa-ttgaccctaaatcacccctc 4019591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 37051669 - 37051613
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||| |||||||| |||||  |||||||||||||||||||||||| |||||    
T  37051669 agaaaaacgatttagaggggtgattcagggtcaaaaattgaccctaaatcatccctc 37051613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 40462064 - 40462116
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||| |||||||||| |||||||||||||||| ||||| ||||||||||    
T  40462064 agaaaaacaagttagaggggtgattttgggtcaaaatttgactctaaatcacc 40462116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 42106146 - 42106100
Alignment:
Q  55 gttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||| || ||||||| |||||||||||||||||||||||||||||    
T  42106146 gttagatgggtgattttaggtcaaaaattgaccctaaatcacccctc 42106100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 20251697 - 20251640
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggt-caaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||||| || |||||||||||  |||||| ||||||||||||||||||    
T  20251697 agaaaaacgagttagaagggtgattttgggtaaaaaaatcgaccctaaatcacccctc 20251640  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 25939565 - 25939598
Alignment:
Q  65 tgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||||||||||||||||||    
T  25939565 tgattttgggtcaaaaattgaccctaaatcaccc 25939598  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 43242856 - 43242803
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    |||||||||||||| | || |||||||| |||||||| ||||||||||||||||    
T  43242856 agaaaaacgagttaaatgggtgattttgtgtcaaaaactgaccctaaatcaccc 43242803  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47914596 - 47914637
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  47914596 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 47914637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 54240197 - 54240156
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  54240197 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 54240156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 7656546 - 7656592
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaat 93  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  7656546 agaaaaacgagttagaggg-tgattt-gggtcaaaaattgaccctaaat 7656592  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3088666 - 3088705
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  3088666 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 3088705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22286753 - 22286792
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaa 40  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  22286753 acgacgaaatcacaaaataaaaaacgaaatagatgtgaaa 22286792  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 25631692 - 25631735
Alignment:
Q  58 agagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||    
T  25631692 agagggatgattttaggtcaaaaattgacccaaaaccacccctc 25631735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 30156399 - 30156468
Alignment:
Q  68 ttttgggtcaaaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaa 141  Q
    ||||||||||||| ||||||||||||||||||||   ||||||||||||| || ||| || ||| |||||||||    
T  30156399 ttttgggtcaaaa-ttgaccctaaatcacccctc---tgaaaagaagaaatgagtgatggttagagtttgagaa 30156468  T

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Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 33070199 - 33070152
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaa 92  Q
    |||||||||| |||||||| |||||| |||| ||||||||||||||||    
T  33070199 agaaaaacgatttagaggggtgatttggggttaaaaattgaccctaaa 33070152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 43839523 - 43839562
Alignment:
Q  3 gacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  43839523 gacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 43839562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 2598126 - 2598076
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    ||||||||||||||||  |||||||||||||||||| |||  |||||||||    
T  2598126 aaaaacgagttagaggagtgattttgggtcaaaaatcgactttaaatcacc 2598076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 21803638 - 21803600
Alignment:
Q  4 acgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  21803638 acgaaatcacaaaataaaaaacgaaatagatgtgaaaat 21803600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 45664329 - 45664291
Alignment:
Q  4 acgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  45664329 acgaaatcacaaaataaaaaacgaaatagatgtgaaaat 45664291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1165399 - 1165440
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  1165399 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 1165440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14741328 - 14741369
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  14741328 acgacgaaatcacaaaataaaaaatgaaatagatgtgaaaat 14741369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32089933 - 32089974
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  32089933 acgacgaaatcacaaaataaaaaatgaaatagatgtgaaaat 32089974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 34767024 - 34766973
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||||||||||||||| |||||||||||| || ||| ||||||||||||||    
T  34767024 agaaaaacgagttagaggg-tgattttgggtc-aatattaaccctaaatcaccc 34766973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35501762 - 35501803
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    ||||| |||||||||||||||||||| || ||||||||||||    
T  35501762 acgacaaaatcacaaaataaaaaacgaaatagatgtgaaaat 35501803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 40797075 - 40797023
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccct 100  Q
    |||||| |||||||||| ||||||||| |||||| || ||||||||||||||||    
T  40797075 aaaaacaagttagaggggtgattttggctcaaaa-ttaaccctaaatcacccct 40797023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43029794 - 43029753
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  43029794 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 43029753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 43839587 - 43839638
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  43839587 agaaaagcgagttagaggg-tgactttgg-tcaaaaattgaccctaaatcaccc 43839638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 73
Target Start/End: Original strand, 29182677 - 29182705
Alignment:
Q  45 agaaaaacgagttagagggatgattttgg 73  Q
    |||||||||||||||||||||||||||||    
T  29182677 agaaaaacgagttagagggatgattttgg 29182705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 33977994 - 33978041
Alignment:
Q  47 aaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacc 97  Q
    |||||||||||| ||||||   ||||||||||||||||||| |||||||||    
T  33977994 aaaaacgagttaaagggat---tttgggtcaaaaattgaccttaaatcacc 33978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 9715 - 9773
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcacccctc 101  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  9715 atagaaaaacgagttagaggagtgattttgggtcaaaaattgaccctaaatcatccctc 9773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 822 - 774
Alignment:
Q  48 aaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcac 96  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  822 aaaacgagttagagtgatgatttttggtcaaaaattgaccttaaatcac 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 11844 - 11896
Alignment:
Q  43 atagaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatca 95  Q
    |||||||||||||||||| |  |||||||||||||||||||||| ||||||||    
T  11844 atagaaaaacgagttagatgagtgattttgggtcaaaaattgacactaaatca 11896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 12272 - 12318
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaa 91  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||    
T  12272 agaagaacgagctagagagatgattttgggtcaaaaattgaccctaa 12318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12206 - 12247
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||| || || |||||||||    
T  12206 acgacgaaatcacaaaataaaaaacgaaataggtgtgaaaat 12247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 11064 - 11011
Alignment:
Q  45 agaaaaacgagttagagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    ||||||| ||||||||||| |||||||  ||||||||||||||| |||||||||    
T  11064 agaaaaatgagttagaggggtgattttaagtcaaaaattgacccaaaatcaccc 11011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 1174 - 1213
Alignment:
Q  58 agagggatgattttgggtcaaaaattgaccctaaatcaccc 98  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  1174 agagggatgattttgggtcaaaaattga-cctaaatcaccc 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 2902 - 2839
Alignment:
Q  78 aaaattgaccctaaatcacccctccgatgaaaagaagaaaggaatgacggctagggtttgagaa 141  Q
    ||||||||||||||||||||||||  |  | |||||||||||  ||||| ||||||||||||||    
T  2902 aaaattgaccctaaatcacccctctaacaagaagaagaaaggggtgacgactagggtttgagaa 2839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1144 - 1185
Alignment:
Q  1 acgacgaaatcacaaaataaaaaacgtaacagatgtgaaaat 42  Q
    |||||||||||||||||||||||||  || ||||||||||||    
T  1144 acgacgaaatcacaaaataaaaaacaaaatagatgtgaaaat 1185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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