View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4653_low_5 (Length: 383)

Name: NF4653_low_5
Description: NF4653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4653_low_5
NF4653_low_5
[»] chr5 (4 HSPs)
chr5 (12-194)||(12540693-12540875)
chr5 (240-367)||(12540921-12541048)
chr5 (12-190)||(28385342-28385520)
chr5 (240-365)||(28385570-28385695)
[»] chr7 (2 HSPs)
chr7 (19-190)||(3417520-3417691)
chr7 (242-367)||(3417343-3417468)
[»] chr2 (6 HSPs)
chr2 (19-188)||(13448378-13448547)
chr2 (19-190)||(13440215-13440386)
chr2 (18-190)||(13454848-13455020)
chr2 (240-367)||(13440436-13440563)
chr2 (240-357)||(13448599-13448716)
chr2 (241-357)||(13455071-13455187)
[»] chr4 (6 HSPs)
chr4 (19-190)||(48958159-48958333)
chr4 (19-185)||(48965344-48965510)
chr4 (19-148)||(48912380-48912509)
chr4 (76-190)||(48961365-48961482)
chr4 (286-354)||(48958429-48958497)
chr4 (244-296)||(48974349-48974401)
[»] chr6 (2 HSPs)
chr6 (73-155)||(12590200-12590282)
chr6 (73-190)||(12483454-12483577)
[»] scaffold0536 (2 HSPs)
scaffold0536 (18-155)||(10521-10658)
scaffold0536 (19-155)||(6539-6675)
[»] chr8 (1 HSPs)
chr8 (18-152)||(12641512-12641646)


Alignment Details
Target: chr5 (Bit Score: 179; Significance: 2e-96; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 12540693 - 12540875
Alignment:
Q  12 atgacatggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctc 111  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12540693 atgacacggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctc 12540792  T
Q  112 aatatcttaacctgtggggcccaacccctaatgatcaaacccttttttccaatgtttctctcctcaaatcccttcggcatcca 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12540793 aatatcttaacctgtggggcccaacccctaatgatcaaacccttttttccaatgtttctctcctcaaatcccttcggcatcca 12540875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 240 - 367
Target Start/End: Original strand, 12540921 - 12541048
Alignment:
Q  240 aggaacaacccatatgaatgggtgacccattccttctactgcgcatgcaatctcatatagttgtttgtcaaagaaatgatttatgcttccaaaacatatg 339  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12540921 aggaacaacccatatgaatgggtgacccattccttctactgcacatgcaatctcatatagttgtttgtcaaagaaatgatttatgcttccaaaacatatg 12541020  T
Q  340 tacaccactgagttaacttgctgtgagt 367  Q
    ||||||||||||||||||||||||||||    
T  12541021 tacaccactgagttaacttgctgtgagt 12541048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 28385342 - 28385520
Alignment:
Q  12 atgacatggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctc 111  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||| |||||||||||||||||||| ||||    
T  28385342 atgacaaggccacgttatcattggaactcccgcgccaacagcctctacaattgagttccctccgcaatgtgtcagaaatccccccaccgcagggttgctc 28385441  T
Q  112 aatatcttaacctgtggggcccaacccctaatgatcaaacccttttttccaatgtttctctcctcaaatcccttcggca 190  Q
    ||||||  ||| ||||||||||||||||| || || |||||||| ||||||||||||||||||||||||||||| ||||    
T  28385442 aatatcagaacttgtggggcccaacccctgattatgaaacccttctttccaatgtttctctcctcaaatccctttggca 28385520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 240 - 365
Target Start/End: Original strand, 28385570 - 28385695
Alignment:
Q  240 aggaacaacccatatgaatgggtgacccattccttctactgcgcatgcaatctcatatagttgtttgtcaaagaaatgatttatgcttccaaaacatatg 339  Q
    |||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  28385570 aggaacaacccatatgaatgggtgacctgatgcttctactgcgcatgcaatctcatatagttgtttatcagagaaatggtttatgcttccaaaacatatg 28385669  T
Q  340 tacaccactgagttaacttgctgtga 365  Q
    ||||| |||||||||||| |||||||    
T  28385670 tacacaactgagttaactcgctgtga 28385695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 3e-73; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 3417691 - 3417520
Alignment:
Q  19 ggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctcaatatct 118  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3417691 ggccacgttatcattggaactcctgcaccaacagcctcaacaaatgagttccccccacaatgtgtcataaatccccctaccgcagggtggctcaatatct 3417592  T
Q  119 taacctgtggggcccaacccctaatgatcaaacccttttttccaatgtttctctcctcaaatcccttcggca 190  Q
     ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  3417591 gaacctgtggggcccaacccctaacgatcaaacccttctttccaatgtttctctcctcaaatcccttcggca 3417520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 242 - 367
Target Start/End: Complemental strand, 3417468 - 3417343
Alignment:
Q  242 gaacaacccatatgaatgggtgacccattccttctactgcgcatgcaatctcatatagttgtttgtcaaagaaatgatttatgcttccaaaacatatgta 341  Q
    ||||||||||||||||||||||||||  | |||||| |||| |||||||||||||||||||||| ||| ||||||  |||| ||||||||||||||||||    
T  3417468 gaacaacccatatgaatgggtgacccgatgcttctattgcgtatgcaatctcatatagttgtttatcagagaaatagtttaagcttccaaaacatatgta 3417369  T
Q  342 caccactgagttaacttgctgtgagt 367  Q
    || ||||||||||||||| |||||||    
T  3417368 caacactgagttaacttgttgtgagt 3417343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 2e-62; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 13448378 - 13448547
Alignment:
Q  19 ggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctcaatatct 118  Q
    |||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  13448378 ggccacgttatcattggaactcccgcactaacagcctctacggttgagttccccccgcaatgcgtcataaatccccccactgcagggtggctcaatatct 13448477  T
Q  119 taacctgtggggcccaacccctaatgatcaaacccttttttccaatgtttctctcctcaaatcccttcgg 188  Q
    ||||||||||||||||||||||||||||||||||||| || || || |||||||| ||||||||||||||    
T  13448478 taacctgtggggcccaacccctaatgatcaaacccttcttcccgatatttctctcttcaaatcccttcgg 13448547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 13440215 - 13440386
Alignment:
Q  19 ggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctcaatatct 118  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  13440215 ggccacgttatcattggaactcccgcactaacagactctacaattgagttccccccgcaatgcgtcataaatccccccaccgcagggtggctcaatatct 13440314  T
Q  119 taacctgtggggcccaacccctaatgatcaaacccttttttccaatgtttctctcctcaaatcccttcggca 190  Q
    |||| ||||||||||||||| |||||||||||||| |  | | |||||||||||| || |||||||| ||||    
T  13440315 taacttgtggggcccaacccttaatgatcaaacccatcctcctaatgtttctctcttcgaatccctttggca 13440386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 13454848 - 13455020
Alignment:
Q  18 tggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctcaatatc 117  Q
    |||||||||||||||||||||||||   | |||||||||||| |||||||| ||||| ||||| ||||||||||||||||| |||||||| |||||||||    
T  13454848 tggccacgttatcattggaactcccatgctaacagcctctacgattgagttccccccgcaatgcgtcataaatccccccactgcagggtgactcaatatc 13454947  T
Q  118 ttaacctgtggggcccaacccctaatgatcaaacccttttttccaatgtttctctcctcaaatcccttcggca 190  Q
    ||||| |||||||||||||||||||||||||||||||||||  | |||||| |||| ||||||||||||||||    
T  13454948 ttaacttgtggggcccaacccctaatgatcaaaccctttttctcgatgtttttctcttcaaatcccttcggca 13455020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 367
Target Start/End: Original strand, 13440436 - 13440563
Alignment:
Q  240 aggaacaacccatatgaatgggtgacccattccttctactgcgcatgcaatctcatatagttgtttgtcaaagaaatgatttatgcttccaaaacatatg 339  Q
    ||||||||||||||||||||||||||    | |||||| |||||| || ||||||||||||||||| ||| ||||||  || ||||||||||||||||||    
T  13440436 aggaacaacccatatgaatgggtgactagatgcttctattgcgcacgccatctcatatagttgtttatcagagaaatagttgatgcttccaaaacatatg 13440535  T
Q  340 tacaccactgagttaacttgctgtgagt 367  Q
    |||| ||| |||||||||| || |||||    
T  13440536 tacaacaccgagttaactttctctgagt 13440563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 13448599 - 13448716
Alignment:
Q  240 aggaacaacccatatgaatgggtgacccattccttctactgcgcatgcaatctcatatagttgtttgtcaaagaaatgatttatgcttccaaaacatatg 339  Q
    |||||||||||||||||||||||||||   | ||||||  || ||||| ||||| ||||||||||| ||| | ||||  || ||||||||||||||||||    
T  13448599 aggaacaacccatatgaatgggtgaccggatgcttctatcgcacatgccatctcgtatagttgtttatcagaaaaatagttgatgcttccaaaacatatg 13448698  T
Q  340 tacaccactgagttaact 357  Q
    |||| |||||||||||||    
T  13448699 tacaacactgagttaact 13448716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 13455071 - 13455187
Alignment:
Q  241 ggaacaacccatatgaatgggtgacccattccttctactgcgcatgcaatctcatatagttgtttgtcaaagaaatgatttatgcttccaaaacatatgt 340  Q
    ||||||||||||||||| || |||||   | |||||| || |||||| ||||||||||||||||| | | |  ||| ||| |||||||||||||||||||    
T  13455071 ggaacaacccatatgaacggttgacctgctgcttctagtgagcatgccatctcatatagttgtttattagatgaataattgatgcttccaaaacatatgt 13455170  T
Q  341 acaccactgagttaact 357  Q
    |||  ||||||||||||    
T  13455171 acaatactgagttaact 13455187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 48958159 - 48958333
Alignment:
Q  19 ggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctcaatatct 118  Q
    |||||||| ||||||||||| ||||| | ||||||||| ||| | ||||| | ||| ||||||||||||||| | ||||| |||  ||||||||  |||     
T  48958159 ggccacgtgatcattggaacccccgcgctaacagcctccacagtggagttccacccgcaatgtgtcataaatgcacccacggcaatgtggctcagaatca 48958258  T
Q  119 taacctgtggggcccaacccctaatgatcaaacc---cttttttccaatgtttctctcctcaaatcccttcggca 190  Q
     ||| ||||||||||| |||||||||||||||||   ||| ||||||||||||||||| || ||||| |||||||    
T  48958259 aaacttgtggggcccaccccctaatgatcaaacctttcttctttccaatgtttctctcttcgaatcctttcggca 48958333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 48965344 - 48965510
Alignment:
Q  19 ggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctcaatatct 118  Q
    ||||| || ||||| ||||| ||||||||||||||||| ||  | ||||| |  |||||||| ||||||||  | ||||| || ||||||||||  |||     
T  48965344 ggccatgtaatcatcggaacccccgcaccaacagcctccactgtggagttccaaccacaatgagtcataaaggcacccacagcggggtggctcagaatca 48965443  T
Q  119 taacctgtggggcccaacccctaatgatcaaacccttttttccaatgtttctctcctcaaatccctt 185  Q
     |||||| || |||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||    
T  48965444 gaacctgcggagcccaacccctaataatcaaacccttctttccaatgtttctctcttcgaatccctt 48965510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 48912509 - 48912380
Alignment:
Q  19 ggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctcaatatct 118  Q
    |||||||| ||||||||||| || |||| ||| ||||| ||| | || || | ||||||||||||||||||| | ||||| || | ||||||||  |||     
T  48912509 ggccacgtgatcattggaacccctgcactaactgcctcaacagtggaattccacccacaatgtgtcataaatgcacccacggctgtgtggctcagaatca 48912410  T
Q  119 taacctgtggggcccaacccctaatgatca 148  Q
    |||||||||| ||||||||| |||| ||||    
T  48912409 taacctgtggagcccaacccttaataatca 48912380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 48961365 - 48961482
Alignment:
Q  76 caatgtgtcataaatccccccaccgcagggtggctcaatatcttaacctgtggggcccaacccctaatgatcaaacc---cttttttccaatgtttctct 172  Q
    ||||| ||||||||  | |||||||| | ||||| ||  ||| |||| ||||||||||| ||| |||||||||||||   ||| ||| ||||||||||||    
T  48961365 caatgcgtcataaacacacccaccgctgtgtggcccaggatcataacttgtggggcccaccccttaatgatcaaacccttcttcttttcaatgtttctct 48961464  T
Q  173 cctcaaatcccttcggca 190  Q
    | |||||||| |||||||    
T  48961465 cttcaaatcctttcggca 48961482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 48958429 - 48958497
Alignment:
Q  286 gcaatctcatatagttgtttgtcaaagaaatgatttatgcttccaaaacatatgtacaccactgagtta 354  Q
    ||||||||||| |||||||| ||| | |||| |  |||||||||||| |||||||||| ||||||||||    
T  48958429 gcaatctcataaagttgtttatcagataaataacatatgcttccaaagcatatgtacaacactgagtta 48958497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 48974349 - 48974401
Alignment:
Q  244 acaacccatatgaatgggtgacccattccttctactgcgcatgcaatctcata 296  Q
    ||||||||||||||| ||||||||  | |||||| ||||| ||||||||||||    
T  48974349 acaacccatatgaattggtgacccgatgcttctattgcgcttgcaatctcata 48974401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 12590282 - 12590200
Alignment:
Q  73 ccacaatgtgtcataaatccccccaccgcagggtggctcaatatcttaacctgtggggcccaacccctaatgatcaaaccctt 155  Q
    |||||||||||||||||  | ||||| |||  ||||||||  ||| | || ||||||||||||||||||||||||||||||||    
T  12590282 ccacaatgtgtcataaacgcgcccactgcattgtggctcataatcattacttgtggggcccaacccctaatgatcaaaccctt 12590200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 12483577 - 12483454
Alignment:
Q  73 ccacaatgtgtcataaatccccccaccgcagggtggctcaatatcttaacctgtggggcccaacccctaatgatcaaacccttttt------tccaatgt 166  Q
    ||||| || ||||||||| | ||||| |||||||||||||| |||   |||||||| ||||| ||||| ||||| |||||| | ||      || |||||    
T  12483577 ccacagtgagtcataaatgcacccactgcagggtggctcaaaatcagtacctgtggtgcccaccccctgatgattaaacccatcttattccttctaatgt 12483478  T
Q  167 ttctctcctcaaatcccttcggca 190  Q
    ||||||||||||||||||||||||    
T  12483477 ttctctcctcaaatcccttcggca 12483454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 10658 - 10521
Alignment:
Q  18 tggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctcaatatc 117  Q
    ||||||||| ||||||||||| || |||| ||| ||||| ||  | || || | ||||||||||||||||||  | |||||  ||| |||||| |  |||    
T  10658 tggccacgtgatcattggaacccctgcactaaccgcctccacggtggaattccacccacaatgtgtcataaacgcacccacaacagtgtggcttagaatc 10559  T
Q  118 ttaacctgtggggcccaacccctaatgatcaaaccctt 155  Q
     ||||||| |||||||||||| |||| |||||||||||    
T  10558 ataacctgaggggcccaacccttaataatcaaaccctt 10521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 6675 - 6539
Alignment:
Q  19 ggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctcaatatct 118  Q
    |||||||| ||||| ||||| || |||| ||||||||| ||| | || || | ||||||||| ||||||||  | ||||  ||   ||||||||| |||     
T  6675 ggccacgtgatcatcggaacccctgcactaacagcctcaacagtggaattccacccacaatgcgtcataaacgcacccagagctttgtggctcaaaatca 6576  T
Q  119 taacctgtggggcccaacccctaatgatcaaaccctt 155  Q
    |||| ||||| |||||||||||||| |||||||||||    
T  6575 taacttgtggagcccaacccctaataatcaaaccctt 6539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 12641646 - 12641512
Alignment:
Q  18 tggccacgttatcattggaactcccgcaccaacagcctctacaattgagtttcccccacaatgtgtcataaatccccccaccgcagggtggctcaatatc 117  Q
    ||||||||| ||||||||||  || |||| |||||||||||| |  |||||   ||| ||||| ||||| ||| | ||||| |||| |||||| || |||    
T  12641646 tggccacgtgatcattggaatccctgcactaacagcctctaccaaggagttcgacccgcaatgcgtcatgaatgcacccacagcagcgtggcttaaaatc 12641547  T
Q  118 ttaacctgtggggcccaacccctaatgatcaaacc 152  Q
     | || |||||||||||  |||||||||| |||||    
T  12641546 attacttgtggggcccactccctaatgataaaacc 12641512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University