View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4654-Insertion-18 (Length: 263)
Name: NF4654-Insertion-18
Description: NF4654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4654-Insertion-18 |
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Alignment Details
Target: chr5 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 7 - 254
Target Start/End: Original strand, 7511317 - 7511584
Alignment:
| Q |
7 |
acgtgaagaggtgaaagttcaccctggctttggcgcgttagctagagaatctgattccgagcccaaagcccaagttcaacaatcagttattccgtctttc |
106 |
Q |
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| T |
7511317 |
acgtgaacaggtgaaagttcaccctggctttggcgcgttagctagagaatccgattccgagcccaaagctcaagttcaacaatcagttattccgtctttc |
7511416 |
T |
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| Q |
107 |
tcgcggtactagggtctgcaaaattcccttctacccttaaacttacacccttcctttctcaccaccgtcaacaccactgtctttaccttcacaa------ |
200 |
Q |
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| T |
7511417 |
tcgcggtactagggtctgcaaaattcccttctacccttaaacttgaacccttcctttctcaccaccgtcaacaccactgtcttcaccctcacaatcaggt |
7511516 |
T |
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| Q |
201 |
--------------tcttcaaacttcttacacttcttttgccgccataatctctctgaacactcacac |
254 |
Q |
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| T |
7511517 |
acgcattttctatctcttcaaacttcttacacttcttttgccgccataatctctctgaacactcacac |
7511584 |
T |
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