View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4654_low_11 (Length: 291)
Name: NF4654_low_11
Description: NF4654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4654_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 28 - 274
Target Start/End: Original strand, 6584911 - 6585159
Alignment:
| Q |
28 |
gtaagaacaaataaatttatgttgatcatacaattaaaaattacaaaatagtcctcattaacaaacaataaatattaaattactaaatgaatccttctaa |
127 |
Q |
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| T |
6584911 |
gtaagaacaaataaatttatgttgatcatacaataaaaagttacaaaatagtcctcattaacaaacaataaatattaaattactaaacgaatccttctaa |
6585010 |
T |
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| Q |
128 |
t--ttatactatatatttaaagtgttttagtattaaattcaagagaaataaggggtaataaatcacctctgctccaaaaccaaatgtgaatcccaacaat |
225 |
Q |
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| T |
6585011 |
taattatactatatatttaaagtgttttagtattaaattcaagagaaataaggagtaataaatcacctctgctccaaaaccaaatgtgaatcccaacaat |
6585110 |
T |
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| Q |
226 |
atccctgctggtaatccaacagcatagtaggatccaagattgatgtaag |
274 |
Q |
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| T |
6585111 |
atccctgctggtaatccaacagcatagtaggatccaagattgatgtaag |
6585159 |
T |
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