View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4654_low_18 (Length: 255)

Name: NF4654_low_18
Description: NF4654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4654_low_18
NF4654_low_18
[»] chr3 (29 HSPs)
chr3 (18-128)||(40552332-40552442)
chr3 (18-87)||(3655275-3655344)
chr3 (18-128)||(48354934-48355044)
chr3 (20-128)||(47481515-47481623)
chr3 (20-128)||(51213056-51213164)
chr3 (18-128)||(20373369-20373479)
chr3 (18-128)||(26941333-26941443)
chr3 (18-128)||(46297835-46297945)
chr3 (20-128)||(35844319-35844427)
chr3 (18-84)||(42506148-42506214)
chr3 (18-128)||(37203060-37203170)
chr3 (18-78)||(21009875-21009935)
chr3 (18-92)||(4761722-4761796)
chr3 (18-128)||(4015453-4015563)
chr3 (18-120)||(29099356-29099458)
chr3 (18-85)||(34132971-34133038)
chr3 (17-133)||(54828773-54828888)
chr3 (18-128)||(37157701-37157810)
chr3 (46-87)||(54505842-54505883)
chr3 (37-133)||(22450956-22451052)
chr3 (18-92)||(22446138-22446211)
chr3 (45-87)||(41585407-41585449)
chr3 (18-128)||(44186574-44186684)
chr3 (46-128)||(33698185-33698263)
chr3 (18-115)||(11357437-11357535)
chr3 (46-128)||(52041024-52041106)
chr3 (100-128)||(11835761-11835789)
chr3 (100-128)||(40640652-40640680)
chr3 (100-128)||(43348282-43348310)
[»] chr8 (29 HSPs)
chr8 (18-124)||(37970598-37970704)
chr8 (18-128)||(10555281-10555391)
chr8 (18-128)||(43643674-43643784)
chr8 (18-128)||(1150184-1150294)
chr8 (18-128)||(23854510-23854620)
chr8 (18-133)||(36695045-36695160)
chr8 (18-128)||(1204928-1205038)
chr8 (18-128)||(13307624-13307734)
chr8 (18-128)||(30654662-30654772)
chr8 (18-92)||(8803889-8803963)
chr8 (18-128)||(6098597-6098707)
chr8 (20-128)||(16446956-16447064)
chr8 (18-128)||(31933965-31934075)
chr8 (18-85)||(9864192-9864259)
chr8 (19-69)||(1149712-1149762)
chr8 (18-87)||(12876151-12876220)
chr8 (18-128)||(16222864-16222974)
chr8 (38-128)||(27082937-27083027)
chr8 (18-128)||(34894968-34895078)
chr8 (38-128)||(38643979-38644069)
chr8 (18-131)||(465840-465953)
chr8 (18-92)||(40862456-40862531)
chr8 (19-130)||(7891037-7891139)
chr8 (18-87)||(34952110-34952179)
chr8 (65-128)||(15009243-15009306)
chr8 (100-128)||(5300107-5300135)
chr8 (100-128)||(7998364-7998392)
chr8 (100-128)||(35459859-35459887)
chr8 (100-128)||(39099270-39099298)
[»] chr7 (34 HSPs)
chr7 (18-128)||(37109849-37109959)
chr7 (22-133)||(17842664-17842775)
chr7 (18-128)||(27283721-27283831)
chr7 (18-133)||(18797301-18797414)
chr7 (18-128)||(32821127-32821237)
chr7 (18-128)||(38258522-38258632)
chr7 (18-128)||(7334771-7334881)
chr7 (18-128)||(24211718-24211828)
chr7 (18-130)||(27421453-27421565)
chr7 (18-128)||(30055503-30055614)
chr7 (18-128)||(5657555-5657665)
chr7 (40-128)||(31579165-31579253)
chr7 (18-132)||(23111163-23111277)
chr7 (18-128)||(37346999-37347109)
chr7 (20-128)||(12390706-12390814)
chr7 (18-92)||(38053499-38053573)
chr7 (18-128)||(4582896-4583006)
chr7 (18-128)||(21991613-21991723)
chr7 (18-128)||(43686018-43686127)
chr7 (20-128)||(8861262-8861370)
chr7 (20-128)||(9355902-9356010)
chr7 (18-87)||(10481622-10481692)
chr7 (18-92)||(26980336-26980410)
chr7 (18-128)||(48928637-48928747)
chr7 (19-87)||(44413454-44413522)
chr7 (21-133)||(26524404-26524516)
chr7 (18-72)||(32432485-32432539)
chr7 (18-128)||(31520797-31520907)
chr7 (18-72)||(29173573-29173627)
chr7 (38-87)||(22687257-22687306)
chr7 (18-87)||(33688336-33688405)
chr7 (18-78)||(11071233-11071293)
chr7 (20-92)||(12165765-12165837)
chr7 (35-87)||(34362239-34362291)
[»] scaffold0291 (1 HSPs)
scaffold0291 (18-132)||(7885-7999)
[»] chr6 (16 HSPs)
chr6 (18-128)||(4318895-4319005)
chr6 (18-134)||(1945829-1945946)
chr6 (18-128)||(8513235-8513345)
chr6 (18-128)||(3880011-3880121)
chr6 (18-128)||(5627393-5627503)
chr6 (18-133)||(29182160-29182275)
chr6 (18-128)||(7055287-7055397)
chr6 (18-128)||(7235106-7235216)
chr6 (18-130)||(6088908-6089020)
chr6 (66-130)||(30353478-30353542)
chr6 (18-128)||(18498435-18498546)
chr6 (18-87)||(15491658-15491727)
chr6 (18-87)||(33893074-33893143)
chr6 (18-76)||(6091255-6091313)
chr6 (54-128)||(20768088-20768162)
chr6 (18-132)||(21017184-21017298)
[»] chr5 (42 HSPs)
chr5 (18-128)||(22974145-22974255)
chr5 (21-128)||(31705677-31705784)
chr5 (18-92)||(22255219-22255294)
chr5 (18-92)||(24886142-24886216)
chr5 (19-87)||(17158094-17158162)
chr5 (18-137)||(36860416-36860535)
chr5 (18-87)||(14919591-14919660)
chr5 (20-130)||(27318552-27318662)
chr5 (18-128)||(19119861-19119971)
chr5 (18-128)||(36866764-36866874)
chr5 (18-128)||(38528299-38528409)
chr5 (18-128)||(40133387-40133497)
chr5 (20-76)||(5829955-5830011)
chr5 (18-130)||(699150-699262)
chr5 (24-128)||(15724492-15724596)
chr5 (18-92)||(7208926-7209000)
chr5 (18-128)||(8741949-8742060)
chr5 (45-128)||(14409416-14409499)
chr5 (18-133)||(30969387-30969502)
chr5 (18-128)||(1429208-1429318)
chr5 (18-128)||(5112376-5112486)
chr5 (18-128)||(7693232-7693342)
chr5 (18-128)||(35511540-35511650)
chr5 (18-128)||(35826546-35826656)
chr5 (18-87)||(43308715-43308783)
chr5 (20-92)||(9200271-9200343)
chr5 (35-128)||(12910352-12910445)
chr5 (20-129)||(26268075-26268184)
chr5 (18-130)||(5837555-5837667)
chr5 (18-133)||(27330303-27330416)
chr5 (20-131)||(25500991-25501102)
chr5 (45-128)||(26317774-26317857)
chr5 (46-87)||(22255618-22255659)
chr5 (18-87)||(23116285-23116354)
chr5 (18-128)||(32563151-32563261)
chr5 (18-68)||(35504427-35504477)
chr5 (35-133)||(13956425-13956523)
chr5 (18-128)||(39572821-39572931)
chr5 (18-69)||(21088829-21088880)
chr5 (45-87)||(5748478-5748520)
chr5 (18-128)||(22980795-22980905)
chr5 (23-87)||(42342776-42342840)
[»] chr4 (42 HSPs)
chr4 (18-128)||(25184115-25184225)
chr4 (20-134)||(27396612-27396726)
chr4 (18-137)||(34361590-34361709)
chr4 (18-128)||(19440747-19440858)
chr4 (18-134)||(55477990-55478110)
chr4 (35-128)||(35021151-35021244)
chr4 (18-130)||(17173290-17173402)
chr4 (17-87)||(17167756-17167826)
chr4 (18-128)||(19089552-19089662)
chr4 (18-128)||(25701156-25701266)
chr4 (18-128)||(32912679-32912789)
chr4 (20-128)||(879649-879757)
chr4 (18-128)||(37663840-37663948)
chr4 (18-128)||(3042613-3042723)
chr4 (18-128)||(39397920-39398030)
chr4 (18-130)||(36493787-36493899)
chr4 (18-128)||(29584299-29584407)
chr4 (38-87)||(4396369-4396418)
chr4 (18-128)||(7703519-7703629)
chr4 (18-128)||(34948196-34948306)
chr4 (18-83)||(50697289-50697354)
chr4 (18-133)||(9139244-9139357)
chr4 (18-130)||(47253749-47253860)
chr4 (18-92)||(54499337-54499412)
chr4 (25-128)||(4205118-4205221)
chr4 (18-128)||(37287735-37287846)
chr4 (18-128)||(49375968-49376079)
chr4 (18-128)||(4597995-4598104)
chr4 (18-128)||(28003085-28003195)
chr4 (18-128)||(38011856-38011966)
chr4 (18-128)||(42199731-42199841)
chr4 (45-92)||(53124325-53124372)
chr4 (21-127)||(6864038-6864144)
chr4 (18-87)||(23761115-23761184)
chr4 (18-128)||(30002723-30002833)
chr4 (18-128)||(35025687-35025797)
chr4 (18-128)||(55241203-55241313)
chr4 (19-128)||(37775671-37775780)
chr4 (18-76)||(50764784-50764842)
chr4 (100-129)||(20097509-20097538)
chr4 (100-133)||(38812278-38812311)
chr4 (100-128)||(38811815-38811843)
[»] chr1 (36 HSPs)
chr1 (18-128)||(18422649-18422759)
chr1 (18-128)||(32267032-32267142)
chr1 (18-128)||(10922725-10922835)
chr1 (18-130)||(15752025-15752137)
chr1 (18-128)||(15382931-15383041)
chr1 (18-87)||(37451325-37451394)
chr1 (18-87)||(51128898-51128967)
chr1 (18-128)||(19899837-19899947)
chr1 (18-87)||(28564849-28564918)
chr1 (18-128)||(37618962-37619074)
chr1 (18-85)||(30327020-30327087)
chr1 (18-128)||(1547285-1547395)
chr1 (18-128)||(2959746-2959856)
chr1 (18-128)||(30254422-30254531)
chr1 (19-130)||(28769649-28769759)
chr1 (18-92)||(32216089-32216163)
chr1 (18-87)||(9903122-9903191)
chr1 (18-128)||(23999345-23999455)
chr1 (18-128)||(42721037-42721147)
chr1 (18-87)||(48620676-48620745)
chr1 (18-133)||(8222124-8222236)
chr1 (21-87)||(27763382-27763447)
chr1 (37-87)||(46931450-46931500)
chr1 (18-128)||(34012445-34012555)
chr1 (18-128)||(38823212-38823322)
chr1 (18-119)||(47279196-47279297)
chr1 (48-128)||(16415643-16415723)
chr1 (33-128)||(30254856-30254950)
chr1 (18-128)||(10182076-10182186)
chr1 (18-128)||(11742418-11742528)
chr1 (18-69)||(21289729-21289780)
chr1 (18-87)||(3534971-3535040)
chr1 (18-128)||(14758039-14758149)
chr1 (18-87)||(27563973-27564042)
chr1 (100-128)||(27227627-27227655)
chr1 (100-128)||(43579244-43579272)
[»] chr2 (29 HSPs)
chr2 (19-128)||(33551078-33551187)
chr2 (18-92)||(37905746-37905820)
chr2 (20-128)||(13711466-13711574)
chr2 (18-92)||(43648336-43648410)
chr2 (18-134)||(4166918-4167034)
chr2 (20-87)||(19289416-19289483)
chr2 (18-128)||(11366472-11366582)
chr2 (18-128)||(26357579-26357689)
chr2 (21-128)||(17054190-17054297)
chr2 (18-133)||(36641983-36642098)
chr2 (18-130)||(43770930-43771041)
chr2 (18-128)||(2325461-2325571)
chr2 (18-128)||(35958911-35959021)
chr2 (19-128)||(17071829-17071938)
chr2 (18-131)||(41463941-41464054)
chr2 (18-92)||(27350029-27350103)
chr2 (18-128)||(4264168-4264278)
chr2 (18-128)||(19313854-19313964)
chr2 (18-131)||(3176938-3177051)
chr2 (18-130)||(33660459-33660571)
chr2 (18-76)||(33902120-33902178)
chr2 (18-83)||(4763678-4763743)
chr2 (48-128)||(41465511-41465591)
chr2 (45-128)||(18494386-18494469)
chr2 (18-92)||(33709323-33709397)
chr2 (18-59)||(39167454-39167495)
chr2 (20-92)||(4478407-4478479)
chr2 (100-128)||(7007063-7007091)
chr2 (100-128)||(43446480-43446508)
[»] scaffold0022 (1 HSPs)
scaffold0022 (18-130)||(146089-146201)
[»] scaffold0002 (3 HSPs)
scaffold0002 (20-87)||(94458-94525)
scaffold0002 (18-76)||(408501-408559)
scaffold0002 (18-128)||(136-246)
[»] scaffold0061 (1 HSPs)
scaffold0061 (18-130)||(43957-44069)
[»] scaffold0017 (1 HSPs)
scaffold0017 (18-130)||(154718-154830)
[»] scaffold0009 (1 HSPs)
scaffold0009 (65-128)||(100823-100886)


Alignment Details
Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 40552332 - 40552442
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | ||       ||||||||||||||||||    
T  40552332 tgaacttttgatgtcattgtacaaacggtggagtgttactcattacatttttgatgttatagtgttaacttctccaaaaaagtcattctcatgacttcac 40552431  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  40552432 catagaatttt 40552442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 3655275 - 3655344
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  3655275 tgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaact 3655344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 48355044 - 48354934
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  |||||||||||  |||||||||||||||||||||||| || ||||| |||||||| ||||       ||||||||||||||||||    
T  48355044 tgaacttttgatgccattgtacaaacaatggggtgttactcattacatttttaatattatagtgttaacttcaccataaaaatcattctcatgacttcac 48354945  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  48354944 catagaatttt 48354934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 47481623 - 47481515
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||       ||||||  ||||||||||||    
T  47481623 aacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaacatcattcctatgacttcacca 47481524  T
Q  120 tagaatttt 128  Q
    || ||||||    
T  47481523 taaaatttt 47481515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 51213056 - 51213164
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||  ||||||||||| |||||||||| |||||||||||||| |||||| | |||||||| ||||       ||||||||||||||||||||    
T  51213056 aacttttgatgccattgtacaaacagtggggtgttgctcattacattttttatgttacagtgttaacttcaccaaaaaagtcattctcatgacttcacca 51213155  T
Q  120 tagaatttt 128  Q
    |||||||||    
T  51213156 tagaatttt 51213164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 20373369 - 20373479
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| | |||||| ||||       ||||||| ||||||||||    
T  20373369 tgaacttttgatgtcattgtacaaacagtggggtgttactcgttacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgacttcac 20373468  T
Q  118 catagaatttt 128  Q
     ||| ||||||    
T  20373469 tataaaatttt 20373479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 26941333 - 26941443
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||| | ||||||| ||||| |||||||| ||||       ||||||| ||||||||||    
T  26941333 tgaacttttgatgtcattatacaaacagtggggtgttactcattataattttgattttatagtgttaacttcaccaaaaaaatcattcttatgacttcac 26941432  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  26941433 catagaatttt 26941443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 46297835 - 46297945
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    ||||||||||| |  ||||||||||| |||| |||||||||| || ||||||||||||||| |||||||| ||||       ||||| ||||||||||||    
T  46297835 tgaacttttgacgccattgtacaaacagtggtgtgttactcactatatttttgatgttatagtgttaacttcaccagaaaagtcattttcatgacttcac 46297934  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  46297935 catagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 35844427 - 35844319
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||| | ||||||||| ||| |||||||||||  ||||||||| ||||||| |||||||| ||||       ||||| ||||||||||||||    
T  35844427 aacttttgatgtcactgtacaaacagtgaggtgttactcacaacatttttgttgttatagtgttaacttcaccagaaaagtcattatcatgacttcacca 35844328  T
Q  120 tagaatttt 128  Q
    |||||||||    
T  35844327 tagaatttt 35844319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 42506148 - 42506214
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgtta 84  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||| |||||    
T  42506148 tgaacttttgatgtcattgtacaaacagtggggtattactcattacaattttgatgttatagtgtta 42506214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 37203170 - 37203060
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||| ||||||||||||||| |||| ||||||||||||| |||||||| || |       ||||| | ||||||||||    
T  37203170 tgaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaaatcatttttatgacttcac 37203071  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  37203070 catagaatttt 37203060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 21009875 - 21009935
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttata 78  Q
    |||||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||    
T  21009875 tgaacttttgatgtcattctacaaatagtggggtgttactcattacatttttgatgttata 21009935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 4761722 - 4761796
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||| ||||||||||| |||  ||||||||||||||||||||||| ||||| | |||||| ||||    
T  4761722 tgaacttttgatgtcattgtacaaacagtgaagtgttactcattacatttttgatattatagtattaacttcacc 4761796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 4015563 - 4015453
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | | ||||||| || ||||||||||||  ||| |||||||| |||| |||||||| || |       ||||||||||||||||||    
T  4015563 tgaacttttgatgtcactctacaaacagttgggtgttactcacaacacttttgatgctatagtgttaacttcatcagaaaagtcattctcatgacttcac 4015464  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  4015463 catagaatttt 4015453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 29099458 - 29099356
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||| ||||| | ||||||||| |||||||||||||||  |||||||| |||||||| |||||||| ||||       ||||||| ||||||||||    
T  29099458 tgaactttagatgtcactgtacaaacagtggggtgttactcacgacattttttatgttatagtgttaacttcaccagaaaagtcattctaatgacttcac 29099359  T
Q  118 cat 120  Q
    |||    
T  29099358 cat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 34133038 - 34132971
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaa 85  Q
    |||||||||||||| ||||||||||| |||||||||||||||  |||||||||||  |||| ||||||    
T  34133038 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaa 34132971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 54828773 - 54828888
Alignment:
Q  17 atgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttca 116  Q
    ||||| |||||||||  ||||  |||||||||||||||||||||||||||||| |||||||| ||||||||  |||       | ||| | |||||||||    
T  54828773 atgaatttttgatgtcgttgtttaaacggtggggtgttactcattacattttt-atgttatagtgttaactttaccaaaaaaattatttttatgacttca 54828871  T
Q  117 ccatagaatttttctta 133  Q
    ||||| |||||||||||    
T  54828872 ccataaaatttttctta 54828888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 37157810 - 37157701
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||| | ||||||||||||||| |||| ||||||||||||| |||||||| || |        |||| ||||||||||||    
T  37157810 tgaacttttgatgccactgtacaa-cagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaagccattttcatgacttcac 37157712  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  37157711 catagaatttt 37157701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 54505883 - 54505842
Alignment:
Q  46 tggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  54505883 tggggtgttactcattacatttttgatgttatagtgttaact 54505842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 22451052 - 22450956
Alignment:
Q  37 tacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttttctta 133  Q
    ||||||| ||| |||| |||||| |||| |||||||| |||| |||| ||| ||||       ||||||||||||||||||||||||||||| ||||    
T  22451052 tacaaacagtgaggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaattttcctta 22450956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 22446138 - 22446211
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||  | |||||||| | |||||||||||||| || |||||||||| ||||||||||||| ||||    
T  22446138 tgaacttttgatgccactgtacaaaag-tggggtgttactcactatatttttgatgatataatgttaacttcacc 22446211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 41585407 - 41585449
Alignment:
Q  45 gtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  41585407 gtggggtgttactcattatatttttgatgttatagtgttaact 41585449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 44186574 - 44186684
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | |||| |||| | |||||||||||||  ||| |||||||| |||| |||||||| ||||       ||||||||  |||||||     
T  44186574 tgaacttttgatgtcactgtataaacagcggggtgttactcacaacacttttgatgctatagtgttaacttcaccaaaaaaatcattctctcgacttcat 44186673  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  44186674 catagaatttt 44186684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 33698263 - 33698185
Alignment:
Q  46 tggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    ||||||||||||||  ||||||||||||||||| |||||||| |||          |||||||||||||||||||||||||||    
T  33698263 tggggtgttactcacaacatttttgatgttatagtgttaacttcactagaga----attctcatgacttcaccatagaatttt 33698185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 11357437 - 11357535
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtgggg-tgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttc 115  Q
    |||||||||||||  | ||||||||| |||||| ||||||||| || | |||||||| |||| |||||||| ||||       ||||||||||||||||    
T  11357437 tgaacttttgatgcaactgtacaaacagtgggggtgttactcactatacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 52041024 - 52041106
Alignment:
Q  46 tggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    ||||| |||||||| |||| ||||||||||||| | |||||| ||||       |||||||||||||||||||  ||||||||    
T  52041024 tggggagttactcactacacttttgatgttatagtattaacttcaccagaaaagtcattctcatgacttcacctcagaatttt 52041106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 11835761 - 11835789
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  11835761 tcattctcatgacttcaccatagaatttt 11835789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 40640652 - 40640680
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  40640652 tcattctcatgacttcaccatagaatttt 40640680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 43348310 - 43348282
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  43348310 tcattctcatgacttcaccatagaatttt 43348282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 37970598 - 37970704
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||       ||||||||||||||||||    
T  37970598 tgaacttttgatggcattgtacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 37970697  T
Q  118 catagaa 124  Q
    |||||||    
T  37970698 catagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 10555281 - 10555391
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||||| |||||||| ||||       ||||||||||||||||||    
T  10555281 tgaacttttgatgtcattgtacaaacagtggagtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 10555380  T
Q  118 catagaatttt 128  Q
    | |||||||||    
T  10555381 cgtagaatttt 10555391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 43643674 - 43643784
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||| ||||| ||||||||||| || | ||||||||||||||||||||||||||||| |||||||| ||||       ||||||||||||||||||    
T  43643674 tgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcac 43643773  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  43643774 catagaatttt 43643784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 1150184 - 1150294
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    ||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||  ||||||| ||||       ||||||| ||||||||||    
T  1150184 tgaacttttgatgtcgttgtacaaacagtgggatgttactcattacatttttgatgttatagcgttaacttcaccaaaaaagtcattcttatgacttcac 1150283  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  1150284 catagaatttt 1150294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 23854510 - 23854620
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| |||| |||||| || |||||||||||||||||||||| |||||||| |||||||| ||||       ||||||||||||||||||    
T  23854510 tgaacttttgatgtcattgcacaaacagttgggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 23854609  T
Q  118 catagaatttt 128  Q
    | |||| ||||    
T  23854610 cgtagactttt 23854620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 36695045 - 36695160
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| |||||||||||||||  ||||||||||| ||||| |||||||| || |       ||||| || |||||||||    
T  36695045 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcac 36695144  T
Q  118 catagaatttttctta 133  Q
    ||||||||||| ||||    
T  36695145 catagaattttcctta 36695160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 1205038 - 1204928
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| |||  |||||||||| ||||||||| |||||||| |||||||| ||||       ||||||||||||||||||    
T  1205038 tgaacttttgatgtcattgtacaaacagtgatgtgttactcactacattttttatgttatagtgttaacttcaccagaaaagtcattctcatgacttcac 1204939  T
Q  118 catagaatttt 128  Q
    | || ||||||    
T  1204938 cgtaaaatttt 1204928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 13307734 - 13307624
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||  ||| |||||||||||  ||| ||||||||||||| |||||||| ||||       ||||||||||||||||||    
T  13307734 tgaacttttgatgtcactgtacaaatagtgaggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaatcattctcatgacttcac 13307635  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  13307634 catagaatttt 13307624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 30654662 - 30654772
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| |||  |||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||       ||| ||| ||||||||||    
T  30654662 tgaacttttgatgtcattcaacaaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcactcttatgacttcac 30654761  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  30654762 cataaaatttt 30654772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 8803889 - 8803963
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  8803889 tgaacttttgatgtcattctacaaatagtggagtgttactcattacatttttgatgttatagtgttaacttcacc 8803963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 6098597 - 6098707
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| ||||||||||||||| || |||||||||| |||| | |||||| ||||       | ||| ||||||||||||    
T  6098597 tgaacttttgatgtcactgtacaaacagtggggtgttactcactatatttttgatgctatagtattaacttcaccaaaaaagttattttcatgacttcac 6098696  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  6098697 catagaatttt 6098707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 16446956 - 16447064
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||  ||| ||||||| ||||||||||||||| |||| ||||||||||||| ||||||||  | |       ||||| ||||||||||||||    
T  16446956 aacttttgatgccattatacaaacagtggggtgttactcactacaattttgatgttatagtgttaactttatcagaaaagtcattttcatgacttcacca 16447055  T
Q  120 tagaatttt 128  Q
    |||||||||    
T  16447056 tagaatttt 16447064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 31933965 - 31934075
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| |||||| |||  |||||||||||||||||| ||||||||| | ||| |||||||| ||||       |||||||||| |||||||    
T  31933965 tgaacttttgatgtcattgtataaagagtggggtgttactcattatatttttgatatcatagtgttaacttcaccaaaaaaatcattctcataacttcac 31934064  T
Q  118 catagaatttt 128  Q
      |||||||||    
T  31934065 gttagaatttt 31934075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 9864259 - 9864192
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaa 85  Q
    |||||||||||||| ||||||||||| |||||||||||||||  |||||||||||  |||| ||||||    
T  9864259 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaa 9864192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 1149712 - 1149762
Alignment:
Q  19 gaacttttgatgtgattgtacaaacggtggggtgttactcattacattttt 69  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  1149712 gaacttttgatgtcattgtacaaacagtgggttgttactcattacattttt 1149762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 12876220 - 12876151
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| ||||||||||| || ||||||||||||  |||||||| || ||||| ||||||||    
T  12876220 tgaacttttgatgtcattgtacaaacagttgggtgttactcacaacattttttatattatagtgttaact 12876151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 16222974 - 16222864
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| ||||||   |||||| || |||||| |||||||| |||||| | ||||       |||||||||||| |||||    
T  16222974 tgaacttttgatgtcattgtacaaactgtggggaactactcactatattttttatgttatagtgttaaattcaccagaaaagtcattctcatgatttcac 16222875  T
Q  118 catagaatttt 128  Q
    | |||||||||    
T  16222874 cgtagaatttt 16222864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 27082937 - 27083027
Alignment:
Q  38 acaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    |||||| ||||||||||||||| |||| |||||||| |||| |||||||| ||||       ||| ||| |||||||||||||||||||||    
T  27082937 acaaacagtggggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcagtctgatgacttcaccatagaatttt 27083027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 34895078 - 34894968
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | | ||||||| |||| |||||||||| |||| | ||||||||||| |||||||| || |       ||||| ||||||||||||    
T  34895078 tgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcac 34894979  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  34894978 catagaatttt 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 38644069 - 38643979
Alignment:
Q  38 acaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    |||||| |||||||||||||||  ||| ||||||||||||| ||||||||  |||       |||||||||||| ||||||||||||||||    
T  38644069 acaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttgaccaaaaaagtcattctcatgatttcaccatagaatttt 38643979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 465953 - 465840
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||| ||||||||  | ||||||||| |||||||||||||||  ||| ||||||||||||  |||||||| ||||       ||||| | ||||||||||    
T  465953 tgaatttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatcgtgttaacttcaccacaaaagtcattttaatgacttcac 465854  T
Q  118 catagaatttttct 131  Q
    |||| |||||||||    
T  465853 cataaaatttttct 465840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 40862531 - 40862456
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattaca-tttttgatgttataatgttaactacacc 92  Q
    |||||||||||||  ||||||||||| |||||||||||||||  ||| |||||||| ||||| |||||||| ||||    
T  40862531 tgaacttttgatgccattgtacaaacagtggggtgttactcacaacattttttgatattatagtgttaacttcacc 40862456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 7891037 - 7891139
Alignment:
Q  19 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacc 118  Q
    ||||||||||||  |||||||||||||||| ||||||         |||||||||||||| |||||||| |||        |||||||||||||||||||    
T  7891037 gaacttttgatgccattgtacaaacggtggagtgtta---------tttttgatgttatagtgttaacttcacaaaaaaagtcattctcatgacttcacc 7891127  T
Q  119 atagaatttttc 130  Q
    ||||||||||||    
T  7891128 atagaatttttc 7891139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 34952110 - 34952179
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| | ||||||||| ||||| |||||||||  ||| |||||||| |||| ||||||||    
T  34952110 tgaacttttgatgtcactgtacaaacagtgggctgttactcacaacacttttgatgatatagtgttaact 34952179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 15009306 - 15009243
Alignment:
Q  65 tttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||| |||||||| ||||       ||||||| |||||||||||||||||||||    
T  15009306 tttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaatttt 15009243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 5300107 - 5300135
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  5300107 tcattctcatgacttcaccatagaatttt 5300135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 7998392 - 7998364
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  7998392 tcattctcatgacttcaccatagaatttt 7998364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 35459859 - 35459887
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  35459859 tcattctcatgacttcaccatagaatttt 35459887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 39099270 - 39099298
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  39099270 tcattctcatgacttcaccatagaatttt 39099298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 37109959 - 37109849
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||       ||||| | ||||||||||    
T  37109959 tgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcac 37109860  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  37109859 catagaatttt 37109849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 17842664 - 17842775
Alignment:
Q  22 cttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccata 121  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||       ||||| | ||||||||||||||    
T  17842664 cttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccata 17842763  T
Q  122 gaatttttctta 133  Q
    ||||||| ||||    
T  17842764 gaattttcctta 17842775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 27283831 - 27283721
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||       ||||| | || |||||||    
T  27283831 tgaacttttgatttcattgtacaaacggtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttataacttcac 27283732  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  27283731 catagaatttt 27283721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 18797414 - 18797301
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||   |||||||| ||||       ||||||||||||||||||    
T  18797414 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacattttttatgttag--tgttaacttcaccaaaaaagtcattctcatgacttcac 18797317  T
Q  118 catagaatttttctta 133  Q
    ||||||||||| ||||    
T  18797316 catagaattttcctta 18797301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 32821127 - 32821237
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||| |||| |||||||||| |||||||||||||||||| |||||||| ||||       ||||| ||||||||||||    
T  32821127 tgaacttttgatgccattgtacaaacagtggtgtgttactcactacatttttgatgttatattgttaacttcaccaaaaaaatcattttcatgacttcac 32821226  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  32821227 catagaatttt 32821237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 38258632 - 38258522
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||       ||||| | ||||||||||    
T  38258632 tgaacttttgatgtcattgtacaaacggtgtggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcac 38258533  T
Q  118 catagaatttt 128  Q
    | |||||||||    
T  38258532 cgtagaatttt 38258522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 7334881 - 7334771
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||| || |       ||||||||| ||||||||    
T  7334881 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacatattttatgttatagtgttaacttcatcaaaaaagtcattctcacgacttcac 7334782  T
Q  118 catagaatttt 128  Q
    | |||||||||    
T  7334781 cgtagaatttt 7334771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 24211828 - 24211718
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||| || |||| || ||||||||||||||||||||||||||||||| |||||||| ||||       ||||||| ||||||||||    
T  24211828 tgaacttttgatgccattctataaacagtagggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcac 24211729  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  24211728 catagaatttt 24211718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 27421453 - 27421565
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| |||| ||||||||||  ||| ||||||||||||| |||||||| ||||       ||||| ||| ||||||||    
T  27421453 tgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattatcacgacttcac 27421552  T
Q  118 catagaatttttc 130  Q
    |||||||||||||    
T  27421553 catagaatttttc 27421565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 30055614 - 30055503
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactaca-ccnnnnnnntcattctcatgacttca 116  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||| || |        ||||||| |||||||||    
T  30055614 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaaagtcattcttatgacttca 30055515  T
Q  117 ccatagaatttt 128  Q
    ||||||||||||    
T  30055514 ccatagaatttt 30055503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 5657555 - 5657665
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||| |||||||||||||||  ||| ||||||||||||| |||||||| |||        ||||||||||||||||||    
T  5657555 tgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcac 5657654  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  5657655 catagaatttt 5657665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 31579165 - 31579253
Alignment:
Q  40 aaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| ||||       | ||||| |||||||||||||||||||||    
T  31579165 aaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaatttt 31579253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 23111277 - 23111163
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||  |||| ||||||||||  | ||||||||||||||| |||||||| ||||       ||||| ||||||||||||    
T  23111277 tgaacttttgatgccattgtacaaatagtggtgtgttactcacaatatttttgatgttatagtgttaacttcaccagaaaaatcattttcatgacttcac 23111178  T
Q  118 catagaatttttctt 132  Q
    || ||||||||||||    
T  23111177 cacagaatttttctt 23111163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 37347109 - 37346999
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | |||||||||  ||||||||||||||||| |||||||||| |||| | |||||| ||||       ||||| ||||||||||||    
T  37347109 tgaacttttgatgtcactgtacaaacaatggggtgttactcattatatttttgatggtatagtattaacttcaccaaaaaaatcattttcatgacttcac 37347010  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  37347009 cataaaatttt 37346999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 12390706 - 12390814
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||| | || |||||| ||||| |||||||||||||| ||||||||||||| |||||||| ||||       ||  ||| ||||||||||||    
T  12390706 aacttttgatgtcactgcacaaacagtgggatgttactcattacacttttgatgttatagtgttaacttcaccaaaaaagtcgatctgatgacttcacca 12390805  T
Q  120 tagaatttt 128  Q
    |||||||||    
T  12390806 tagaatttt 12390814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 38053573 - 38053499
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||| ||||||||||| || |||| ||||||||||||||||| |||||||| | |||||| ||||    
T  38053573 tgaacttttgatgtcattgtacaaacagtagggttttactcattacattttttatgttatagtattaacttcacc 38053499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 4583006 - 4582896
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||  |||||||||||||||  |||||||||||  |||| | |||||| ||||       ||||| || |||||||||    
T  4583006 tgaacttttgatgtcattgtacaaatagtggggtgttactcacaacatttttgatactatagtattaacttcaccagaaaagtcattttcgtgacttcac 4582907  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  4582906 catagaatttt 4582896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 21991723 - 21991613
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||| ||||||||||||||   ||| |||||||| |||| |||||||| ||||       ||||||||||||||||||    
T  21991723 tgaacttttgatgacactgtacaaacagtggggtgttactcgcaacaattttgatgctatagtgttaacttcaccataaaaatcattctcatgacttcac 21991624  T
Q  118 catagaatttt 128  Q
    | |||||||||    
T  21991623 cctagaatttt 21991613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 43686127 - 43686018
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||| ||||| |||||||||  ||||||||||| ||||| |||||||| ||||       ||||| || |||||||||    
T  43686127 tgaacttttgatgccattgtacaaacagtggg-tgttactcacaacatttttgatattatagtgttaacttcacccaaaaagtcattttcgtgacttcac 43686029  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  43686028 catagaatttt 43686018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 8861370 - 8861262
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||  | ||||||||| ||||||||||| |||| ||| |||||||| |||| |||||||| | |        ||||||||||||||||||||    
T  8861370 aacttttgatgccactgtacaaacagtggggtgttattcataacacttttgatgctatagtgttaacttcgcgagaaaagtcattctcatgacttcacca 8861271  T
Q  120 tagaatttt 128  Q
    |||||||||    
T  8861270 tagaatttt 8861262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 9355902 - 9356010
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||| | ||||||||| ||||||| || |||| ||||||||| ||| |||| |||||| | ||||       ||||||||||||||||||||    
T  9355902 aacttttgatgtcactgtacaaacagtggggtattgctcactacattttttatgctatagtgttaaattcaccaaaatggtcattctcatgacttcacca 9356001  T
Q  120 tagaatttt 128  Q
    || ||||||    
T  9356002 taaaatttt 9356010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 10481692 - 10481622
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtgggg-tgttactcattacatttttgatgttataatgttaact 87  Q
    |||| ||||||||| ||||||||||| |||||| |||||||||||| |||||| |||||||| ||||||||    
T  10481692 tgaatttttgatgtcattgtacaaacagtgggggtgttactcattatattttttatgttatagtgttaact 10481622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 26980410 - 26980336
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||  | ||||||||| |||||||||||||||  ||| |||||||| ||||||||||||| ||||    
T  26980410 tgaacttttgatgccactgtacaaaccgtggggtgttactcacaacacttttgatgctataatgttaacttcacc 26980336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 48928637 - 48928747
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  |  |||||||  |||||||| |||||| |||| ||||||||||||| |||| ||| ||||       ||||||||||||||||||    
T  48928637 tgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttcac 48928736  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  48928737 cataaaatttt 48928747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 44413454 - 44413522
Alignment:
Q  19 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||||||| | | |||||||||  |||||||||||||| || ||||||||||||||| ||||||||    
T  44413454 gaacttttgatttcagtgtacaaacattggggtgttactcactatatttttgatgttatagtgttaact 44413522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 26524404 - 26524516
Alignment:
Q  21 acttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccat 120  Q
    ||||||||||  | || ||||||  ||| |||||| |||  ||||||||||||||||| |||||||  ||||       |||||||||||||||||||||    
T  26524404 acttttgatgccactgcacaaacaatggagtgttagtcacaacatttttgatgttatagtgttaacatcaccagaaaagtcattctcatgacttcaccat 26524503  T
Q  121 agaatttttctta 133  Q
    |||||||| ||||    
T  26524504 agaattttcctta 26524516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 32432539 - 32432485
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgat 72  Q
    |||||||||||||| |||||||||||  ||||||||||||||  |||||||||||    
T  32432539 tgaacttttgatgtcattgtacaaacaatggggtgttactcacaacatttttgat 32432485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 31520797 - 31520907
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | |||||||||  ||| |||||||||| || |||||||||| |||| | |||||| ||||       ||||| |||||||||||     
T  31520797 tgaacttttgatgtcactgtacaaacaatggagtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagtcattttcatgacttcat 31520896  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  31520897 cataaaatttt 31520907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29173627 - 29173573
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgat 72  Q
    |||||||||||||| ||||||||||| |||| ||||||||||  ||| |||||||    
T  29173627 tgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgat 29173573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 22687306 - 22687257
Alignment:
Q  38 acaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||| |||| ||||||||||  ||||||||||||||||| ||||||||    
T  22687306 acaaacagtggagtgttactcacaacatttttgatgttatagtgttaact 22687257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 33688336 - 33688405
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||  | || |||||| || || |||||||||| ||| ||||||||||||| ||||||||    
T  33688336 tgaacttttgatgccactggacaaacagtaggatgttactcataacacttttgatgttatagtgttaact 33688405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 11071293 - 11071233
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttata 78  Q
    |||||||||||||| | ||||||||| |||| |||||||||  || |||||||||| ||||    
T  11071293 tgaacttttgatgtcactgtacaaacagtggagtgttactcgctatatttttgatgatata 11071233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 12165837 - 12165765
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||  | ||||||||| |||||||||||||||  ||| ||| |||| |||| |||||||| ||||    
T  12165837 aacttttgatgccactgtacaaacagtggggtgttactcacaacactttggatgctatagtgttaacttcacc 12165765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 34362239 - 34362291
Alignment:
Q  35 tgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||||| |||||||||||||||  ||| |||||||| |||| ||||||||    
T  34362239 tgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaact 34362291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 7999 - 7885
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| || |       ||||||| || |||||||    
T  7999 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatgttatagtgttaacttcatcaaaaaagtcattcttataacttcac 7900  T
Q  118 catagaatttttctt 132  Q
    |||||||||||||||    
T  7899 catagaatttttctt 7885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 4318895 - 4319005
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| ||||       ||||||||||||||||||    
T  4318895 tgaacttttgatgtcactgtacaaacagtggggtgttactcataacacttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 4318994  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  4318995 catagaatttt 4319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 1945946 - 1945829
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc-nnnnnnntcattctcatgacttca 116  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||        ||||||| |||||||||    
T  1945946 tgaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaagtcattcttatgacttca 1945847  T
Q  117 ccatagaatttttcttat 134  Q
    || ||||||||| |||||    
T  1945846 ccgtagaattttccttat 1945829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 8513345 - 8513235
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| |||||||||||||||  ||| ||||||| ||||| |||||||| ||||       ||||||||||||||||||    
T  8513345 tgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatattatagtgttaacttcaccagaaaagtcattctcatgacttcac 8513246  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  8513245 catagaatttt 8513235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 3880011 - 3880121
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| || ||||||||||||  ||| |||||||  ||||||||||||| ||||       |||||||| |||||||||    
T  3880011 tgaacttttgatgtcattgtacaaacagtagggtgttactcacaacacttttgatactataatgttaacttcaccagaaaagtcattctcgtgacttcac 3880110  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  3880111 catagaatttt 3880121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 5627503 - 5627393
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||| ||||||  |||||||||||||||||| |||||| |||||||| |||||||| ||||       ||||||| ||||||||||    
T  5627503 tgaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcac 5627404  T
Q  118 catagaatttt 128  Q
    | |||||||||    
T  5627403 cttagaatttt 5627393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 29182275 - 29182160
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | |||| |||| |||||||||||||||  ||| ||||||||||||| |||||||| || |       ||||||||||||||||||    
T  29182275 tgaacttttgatgacactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcatcaataaaatcattctcatgacttcac 29182176  T
Q  118 catagaatttttctta 133  Q
    |||| |||||||||||    
T  29182175 cataaaatttttctta 29182160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 7055287 - 7055397
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||| ||||||  ||| ||||||||| |||| |||||| |||||||| |||||||| ||||       ||||||| ||||||||||    
T  7055287 tgaacttttgatgtcattctacaaatagtgaggtgttactaattatattttttatgttatagtgttaacttcaccaaaaaaatcattcttatgacttcac 7055386  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  7055387 cataaaatttt 7055397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 7235106 - 7235216
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  |  |||||||| |||||||| |||||| |||| ||||||||||||| |||| ||| ||||       |||||||||| |||||||    
T  7235106 tgaacttttgatggcaccgtacaaacagtggggtgctactcactacacttttgatgttatagtgttgacttcaccggaaaagtcattctcataacttcac 7235205  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  7235206 catagaatttt 7235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 6089020 - 6088908
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | | ||||||| |||||| ||||||||  ||| |||||||  |||| |||||||| ||||       ||||||||||||||||||    
T  6089020 tgaacttttgatgccactttacaaacagtggggcgttactcacaacacttttgatactatagtgttaacttcaccagaaaaatcattctcatgacttcac 6088921  T
Q  118 catagaatttttc 130  Q
    |||||||||||||    
T  6088920 catagaatttttc 6088908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 30353478 - 30353542
Alignment:
Q  66 ttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttttc 130  Q
    |||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||    
T  30353478 ttttgatgttataatgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttttc 30353542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 18498546 - 18498435
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtgggg-tgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttca 116  Q
    |||||||||||||  | ||||||||| |||||| |||| |||| |||| |||||||| ||||||||||||| ||||       |||||||||||||||||    
T  18498546 tgaacttttgatgccactgtacaaactgtgggggtgttgctcactacacttttgatgctataatgttaacttcaccaggaaagtcattctcatgacttca 18498447  T
Q  117 ccatagaatttt 128  Q
    | ||||| ||||    
T  18498446 ctatagattttt 18498435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 15491727 - 15491658
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||  | ||||||||  |||||||||||||||  ||| ||||||||||| ||||||||||    
T  15491727 tgaacttttgatgccactgtacaaatagtggggtgttactcacaacacttttgatgttacaatgttaact 15491658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 33893074 - 33893143
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||||| || | ||||||||||  |||||||||||||||  ||| ||||||||||||| ||||||||    
T  33893074 tgaacttttaatatcattgtacaaatagtggggtgttactcacaacacttttgatgttatagtgttaact 33893143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 6091255 - 6091313
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgtta 76  Q
    |||||||||||||  |||||||||||  ||| |||||||||| ||||||||| ||||||    
T  6091255 tgaacttttgatggcattgtacaaacaatggtgtgttactcactacattttttatgtta 6091313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 20768162 - 20768088
Alignment:
Q  54 tactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    |||||| |||| |||||||| |||| |||| ||| ||||       |||||||||||||||||||||||||||||    
T  20768162 tactcactacacttttgatgctatagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20768088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 21017184 - 21017298
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||   ||||||||||||||  |||||||| ||  || |||||||||| ||||       ||||| || |||||||||    
T  21017184 tgaacttttgatgccattgtacaaataatggggtgttactcacaacattttttatactacaatgttaacttcaccaaaaaagtcattttcgtgacttcac 21017283  T
Q  118 catagaatttttctt 132  Q
    | || ||||||||||    
T  21017284 cgtataatttttctt 21017298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 22974145 - 22974255
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||| ||||       |||||||||| |||||||    
T  22974145 tgaacttttgatgttattgtacaaacagtgggatgttactcattacttttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttcac 22974244  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  22974245 catagaatttt 22974255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 31705677 - 31705784
Alignment:
Q  21 acttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccat 120  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||       ||||| | |||||||||||||    
T  31705677 acttttgatgtcattgtacaaacggtagggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccat 31705776  T
Q  121 agaatttt 128  Q
    ||||||||    
T  31705777 agaatttt 31705784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 22255294 - 22255219
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacat-ttttgatgttataatgttaactacacc 92  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  22255294 tgaacttttgatgccattgtacaaacggtggggtgttactcattacattttttgatgttataatgttaacttcacc 22255219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 24886216 - 24886142
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||    
T  24886216 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatagtattaacttcacc 24886142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 17158094 - 17158162
Alignment:
Q  19 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  17158094 gaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaact 17158162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 36860535 - 36860416
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| |||||||||||||||  |||||||| ||  |||| |||||||| ||||       ||||| || |||||||||    
T  36860535 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacattttttatactatagtgttaacttcaccagaaaaatcattttcgtgacttcac 36860436  T
Q  118 catagaatttttcttatgta 137  Q
    ||||||||||| ||||||||    
T  36860435 catagaattttccttatgta 36860416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 14919591 - 14919660
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| ||| || |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  14919591 tgaacttttgatgtcattatataaacagtgaggtgttactcattacatttttgatgttataatgttaact 14919660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 27318552 - 27318662
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||| ||||||||||| |||| |||||||||| ||||||||| ||||| || |||||||| ||||       |||||||||||||||||||     
T  27318552 aacttttgatgtcattgtacaaacagtggtgtgttactcactacattttttatgttttagtgttaacttcaccagaaaaatcattctcatgacttcaccg 27318651  T
Q  120 tagaatttttc 130  Q
    | |||||||||    
T  27318652 ttgaatttttc 27318662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 19119971 - 19119861
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| |||||||||||||    ||| |||||||| |||| |||||||| ||||       ||||||||||||||||||    
T  19119971 tgaacttttgatgtcactgtacaaacagtggggtgttactagcaacacttttgatgctatagtgttaacttcaccacaaaagtcattctcatgacttcac 19119872  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  19119871 catagaatttt 19119861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 36866874 - 36866764
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||| |||||||||||||||  | ||||||||| ||||| |||||||| ||||       ||||| || |||||||||    
T  36866874 tgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatattatagtgttaacttcaccagaaaaatcattttcgtgacttcac 36866775  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  36866774 catagaatttt 36866764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 38528299 - 38528409
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | |||| ||||  ||||||||||||||||||| ||||||||||||| |||||||| || |        |||| ||||||||||||    
T  38528299 tgaacttttgatgtcactgtataaacaatggggtgttactcattacaattttgatgttatagtgttaacttcatcagaaaaaccattttcatgacttcac 38528398  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  38528399 catagaatttt 38528409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 40133497 - 40133387
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||  |||||||||||||||  |||||||||||  ||||||||||||| ||||       ||||| || |||||||||    
T  40133497 tgaacttttgatgccattgtacaaatagtggggtgttactcacaacatttttgatactataatgttaacttcaccacaaaagtcattttcgtgacttcac 40133398  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  40133397 catagaatttt 40133387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 5830011 - 5829955
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgtta 76  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  5830011 aacttttgatgtcattgtacaaacggtagggtgttactcattacattttttatgtta 5829955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 699262 - 699150
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| ||||||||||||||| || |||||| ||| |||| |||||||| || |       |||||||||| |||||||    
T  699262 tgaacttttgatgtcactgtacaaacagtggggtgttactcactagattttttatgctatagtgttaacttcatcagaaaagtcattctcataacttcac 699163  T
Q  118 catagaatttttc 130  Q
    |||| ||||||||    
T  699162 cataaaatttttc 699150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 15724596 - 15724492
Alignment:
Q  24 tttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccataga 123  Q
    |||||||| |||||| |||| |||||||||||||||  | | ||||||||||||| |||||||| ||||       |||||||||| |||||||||||||    
T  15724596 tttgatgtcattgtataaacagtggggtgttactcacaaaacttttgatgttatagtgttaacttcaccaaaaaagtcattctcataacttcaccataga 15724497  T
Q  124 atttt 128  Q
    |||||    
T  15724496 atttt 15724492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 7208926 - 7209000
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||| | |||||||||||| ||||||||||| || ||||||| |||||| |||||||||| ||||    
T  7208926 tgaacttttgatgtcaatgtacaaacggtagggtgttactcgttgcattttttatgttacaatgttaacttcacc 7209000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 8741949 - 8742060
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtgggg-tgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttca 116  Q
    |||||||||||||  |||||||||||  ||||| |||||||||  ||| |||||||| |||| |||||||| ||||       |||||||||||||||||    
T  8741949 tgaacttttgatgccattgtacaaacaatgggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttca 8742048  T
Q  117 ccatagaatttt 128  Q
    ||||||||||||    
T  8742049 ccatagaatttt 8742060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 14409416 - 14409499
Alignment:
Q  45 gtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    |||||||| |||||| |||||||||||||||||| |||| ||| ||||       |||||||||||||||||||||||||||||    
T  14409416 gtggggtgctactcactacatttttgatgttatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaatttt 14409499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 30969387 - 30969502
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| |||||| |||  |||||||||||||||  ||| ||||||||||||| |||||||| ||||       |||||||||||||||||     
T  30969387 tgaacttttgatgtcattgtataaatagtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagataaatcattctcatgacttcat 30969486  T
Q  118 catagaatttttctta 133  Q
      ||||||||| ||||    
T  30969487 tgtagaattttcctta 30969502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 1429208 - 1429318
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||| ||||||||  | ||||||||| ||||||||||||||| || |||||||||| |||| |||||||| ||||       ||||| ||||||||||||    
T  1429208 tgaatttttgatgccagtgtacaaacagtggggtgttactcactatatttttgatgctatagtgttaacttcaccaaaagagtcattttcatgacttcac 1429307  T
Q  118 catagaatttt 128  Q
    |||||| ||||    
T  1429308 catagattttt 1429318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 5112376 - 5112486
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||| ||||||||||||||| || |||||| |||||||| | |||||| ||||       ||||| ||||||||||||    
T  5112376 tgaacttttgatgccactgtacaaacagtggggtgttactcactatattttttatgttatagtattaacttcaccaaaaaagtcattttcatgacttcac 5112475  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  5112476 cataaaatttt 5112486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 7693342 - 7693232
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||| ||||| |||||||||  ||| ||||||||||||| |||||||| ||||       ||||| | ||||||||||    
T  7693342 tgaacttttgatgccactgtacaaacagtgggatgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagtcattttaatgacttcac 7693243  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  7693242 catagaatttt 7693232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 35511540 - 35511650
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | | ||||||| |||| |||||||||| |||| | |||||||||||||||||||| || |       ||||| ||||||||||||    
T  35511540 tgaacttttgatgtcactttacaaacagtggagtgttactcactacagtgttgatgttataatgttaacttcatcagaaacgtcattttcatgacttcac 35511639  T
Q  118 catagaatttt 128  Q
    ||||| |||||    
T  35511640 cataggatttt 35511650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 35826546 - 35826656
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | |||||||||  ||  |||||||||| |||||||||||||||||| | |||||| |||        ||||| ||||||||||||    
T  35826546 tgaacttttgatgtcactgtacaaacaatgaagtgttactcagtacatttttgatgttatagtattaacttcacaaaaaaagtcattatcatgacttcac 35826645  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  35826646 catagaatttt 35826656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 43308715 - 43308783
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||  ||||||| ||| ||||| ||||| |||||||||||||||||||||||||||||||    
T  43308715 tgaacttttgatgccattgtacgaacagtggg-tgttattcattacatttttgatgttataatgttaact 43308783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 9200343 - 9200271
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||| | ||||||||| |||||||||||||||  ||| ||||||||||||| |||||||| ||||    
T  9200343 aacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgttatagtgttaacttcacc 9200271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 12910445 - 12910352
Alignment:
Q  35 tgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    ||||||||| |||||||||||| || || ||||||||||||||| | |||||| ||||       ||||| |||||||||||||||||||||||    
T  12910445 tgtacaaacagtggggtgttacgcactatatttttgatgttatagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaatttt 12910352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 26268184 - 26268075
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||| |  |||||||| |||||||||||||||  ||| |||||||| |||| |||||||| ||||       ||||||||||||||||||      
T  26268184 aacttttgatgtcaccgtacaaacagtggggtgttactcaaaacacttttgatgctatagtgttaacttcaccagaaaaatcattctcatgacttcactg 26268085  T
Q  120 tagaattttt 129  Q
    ||||||||||    
T  26268084 tagaattttt 26268075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 5837667 - 5837555
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||| ||||||||| | ||||||||| |||||||||||||||  ||| |||||||| |||| ||||| || ||||       |||||||||||| |||||    
T  5837667 tgaaattttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaccttcaccagaaaagtcattctcatgaattcac 5837568  T
Q  118 catagaatttttc 130  Q
    | |||||||||||    
T  5837567 cgtagaatttttc 5837555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 27330416 - 27330303
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||| ||  |||||||||||  ||| ||||||||||||| |||||||| ||||       |||||| || ||||||||    
T  27330416 tgaacttttgatgccattgtacaaacagtaaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcac 27330319  T
Q  118 catagaatttttctta 133  Q
    ||||||||||| ||||    
T  27330318 catagaattttcctta 27330303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 25500991 - 25501102
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||  | ||||||||| ||| ||||||| |||  ||| |||||||| |||| ||||||||  |||       ||||||||||||||||||||    
T  25500991 aacttttgatggcagtgtacaaacagtgaggtgttattcacaacacttttgatgctatagtgttaactttaccagaaaagtcattctcatgacttcacca 25501090  T
Q  120 tagaatttttct 131  Q
    ||||||||||||    
T  25501091 tagaatttttct 25501102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 26317774 - 26317857
Alignment:
Q  45 gtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||| ||| ||||||||||||||| |||||||| ||||       ||||| ||||||||||| |||||||||||    
T  26317774 gtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaatttt 26317857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 22255659 - 22255618
Alignment:
Q  46 tggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  22255659 tggggtgttactcattacatttttgatgttatagtgttaact 22255618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 23116285 - 23116354
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||||||||   | ||||||||| |||||||| |||||| |||| ||||||||||||||||||||||    
T  23116285 tgaacttttgattccactgtacaaacagtggggtgctactcactacagttttgatgttataatgttaact 23116354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 32563261 - 32563151
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | |||||| || |||| ||||||||||  ||| ||||||||||||| |||||||| || |       ||||| | ||||||||||    
T  32563261 tgaacttttgatgtcactgtacagacagtggagtgttactcacaacacttttgatgttatagtgttaacttcatcagaaaaatcattttaatgacttcac 32563162  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  32563161 catagaatttt 32563151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 35504477 - 35504427
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttt 68  Q
    |||||||||||||| ||  ||||||||||| ||||||||||||||||||||    
T  35504477 tgaacttttgatgtcatcatacaaacggtgaggtgttactcattacatttt 35504427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 13956425 - 13956523
Alignment:
Q  35 tgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttttctta 133  Q
    ||||||||| ||| ||||||||||| |||| ||||||||||||| |||||||| ||         ||||| ||||||||||||| ||||||||| ||||    
T  13956425 tgtacaaacagtgaggtgttactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttcctta 13956523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 39572931 - 39572821
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | || |||||| |||| ||||||||||  |||||||| || ||||| | ||||||  ||        ||||||||||||||||||    
T  39572931 tgaacttttgatgtcactgcacaaacagtggagtgttactcacaacattttttatattatagtattaacttaactagaaaagtcattctcatgacttcac 39572832  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  39572831 catagaatttt 39572821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 21088829 - 21088880
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacattttt 69  Q
    |||||||||||||| ||||||||||| ||||||||| |||||  ||||||||    
T  21088829 tgaacttttgatgtcattgtacaaacagtggggtgtcactcacaacattttt 21088880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 5748520 - 5748478
Alignment:
Q  45 gtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||||||| |||||||| |||||| ||||||||    
T  5748520 gtggggtgttactcattatatttttgacgttatagtgttaact 5748478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 22980905 - 22980795
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||  ||||| ||||||| ||||||| |  |||||||||  |||| |||||||| ||||       |||||||||| ||||||     
T  22980905 tgaacttttgatgtcattgctcaaacagtggggtattactcactgtatttttgatactatagtgttaacttcaccagaaaagtcattctcataacttcat 22980806  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  22980805 cataaaatttt 22980795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 42342840 - 42342776
Alignment:
Q  23 ttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||||| | |||| |||| ||||||| |||||||  ||||||||||||||||| | ||||||    
T  42342840 ttttgatgtcactgtataaacagtggggtattactcacaacatttttgatgttatagtattaact 42342776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 25184225 - 25184115
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||| ||||| ||||||||||| || | ||||||||||||||||||||||||||||| |||||||| ||||       ||||||||||||||||||    
T  25184225 tgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcac 25184126  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  25184125 catagaatttt 25184115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 27396726 - 27396612
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||| ||||||||||| || ||||||||||||| ||| |||| ||| ||||||||||||| ||||       ||||||||||||||||||||    
T  27396726 aacttttgatgtcattgtacaaacagtagggtgttactcataacacttttaatgctataatgttaacttcaccagaaaagtcattctcatgacttcacca 27396627  T
Q  120 tagaatttttcttat 134  Q
    |||||||||||||||    
T  27396626 tagaatttttcttat 27396612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 34361590 - 34361709
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    ||||||||| |||| ||| ||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||       ||||||| ||||||||||    
T  34361590 tgaacttttaatgtcattctacaaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcac 34361689  T
Q  118 catagaatttttcttatgta 137  Q
    ||||||||||| ||| ||||    
T  34361690 catagaattttccttgtgta 34361709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 19440747 - 19440858
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgac-ttca 116  Q
    |||||||||||||  |||||||||||||||| |||||| |||||||||||||||||||||| |||||||  ||||       ||||||||||||| ||||    
T  19440747 tgaacttttgatgccattgtacaaacggtggagtgttaatcattacatttttgatgttatagtgttaacatcaccaaaaaagtcattctcatgactttca 19440846  T
Q  117 ccatagaatttt 128  Q
    ||||||||||||    
T  19440847 ccatagaatttt 19440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 55477990 - 55478110
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacg----gtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgact 113  Q
    |||||||||||||| |||||||||||     |||| ||||||||| ||||||||||||||||||| |||||||| ||||       ||||||||||||||    
T  55477990 tgaacttttgatgtcattgtacaaacaaacagtggagtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcattctcatgact 55478089  T
Q  114 tcaccatagaatttttcttat 134  Q
    ||||||||||||||| |||||    
T  55478090 tcaccatagaattttccttat 55478110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 35021151 - 35021244
Alignment:
Q  35 tgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||       ||||| |||||||||||||||||||||||    
T  35021151 tgtacaaacagtggtgtgttactcactacatttttgatgttataatgttaacttcaccagaaaagtcattttcatgacttcaccatagaatttt 35021244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 17173402 - 17173290
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| |||||||||||||||  ||||||||||| |||||||||||||| || |       ||||| || | |||||||    
T  17173402 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcac 17173303  T
Q  118 catagaatttttc 130  Q
    |||||||||||||    
T  17173302 catagaatttttc 17173290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 17167826 - 17167756
Alignment:
Q  17 atgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||||||||||| ||||||||||| |||||||||||||||  ||||||||||| ||||||||||||||    
T  17167826 atgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaact 17167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 19089552 - 19089662
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||| ||||| |||||||| || |       | ||||| ||||||||||    
T  19089552 tgaacttttgatgtcattatacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaagttattcttatgacttcac 19089651  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  19089652 catagaatttt 19089662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 25701156 - 25701266
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| || |||||||||||| |||| ||||||||||||||||||||||  |||       ||||| ||||||||||||    
T  25701156 tgaacttttgatgtcactgtacaaacagtagggtgttactcactacacttttgatgttataatgttaactttaccaaaaaagtcattatcatgacttcac 25701255  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  25701256 cataaaatttt 25701266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 32912679 - 32912789
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||| | ||| ||||||   | ||||||||||||||||||||||||||||||| |||||||| ||||       ||||||| ||||||||||    
T  32912679 tgaacttttgatatcattctacaaatactagggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcac 32912778  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  32912779 catagaatttt 32912789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 879649 - 879757
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||| |||||||||||  || |||||||||||||||||||||||||||||| |||| ||| ||||       | |||||||||||||||||     
T  879649 aacttttgatgtcattgtacaaacaatgaggtgttactcattacatttttgatgttatagtgtttacttcaccaaaaaaattattctcatgacttcacct 879748  T
Q  120 tagaatttt 128  Q
    || ||||||    
T  879749 taaaatttt 879757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 37663840 - 37663948
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||  || |||||||| || |       ||||||| ||||||||||    
T  37663840 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacagttttaatgt--tagtgttaacttcatcaaaaaagtcattcttatgacttcac 37663937  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  37663938 catagaatttt 37663948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 3042723 - 3042613
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||| ||||||||| |||||| |||||||||||| ||||||||||||||||  |||||||| |||||||| ||||       ||||| | |||| |||||    
T  3042723 tgaatttttgatgtcattgtataaacggtggggtattactcattacattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgatttcac 3042624  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  3042623 catagaatttt 3042613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 39398030 - 39397920
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | |||||||||  ||||||||||||||  ||| |||| |||||||| |||||||| ||||       ||||||| ||||||||||    
T  39398030 tgaacttttgatgtcactgtacaaacaatggggtgttactcacaacacttttaatgttatagtgttaacttcaccataaaagtcattctaatgacttcac 39397931  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  39397930 catagaatttt 39397920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 36493787 - 36493899
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | |||||||||  |||||||||||||| || |||||||||| |||| | |||||| ||||       | ||| ||||||||||||    
T  36493787 tgaacttttgatgtcactgtacaaacaatggggtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagttattttcatgacttcac 36493886  T
Q  118 catagaatttttc 130  Q
    |||||||||||||    
T  36493887 catagaatttttc 36493899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 29584299 - 29584407
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||| ||| |||||||||||  ||| ||||||||||||| |||||||| ||||       |||||| || ||||||||    
T  29584299 tgaacttttgatgccattgtacaaacagtgaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcac 29584396  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  29584397 catagaatttt 29584407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 4396418 - 4396369
Alignment:
Q  38 acaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  4396418 acaaacggtggggtgttactcattacattttttatgttatagtgttaact 4396369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 7703629 - 7703519
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| |  |||||||| ||||||||||||| |  ||| ||||||||||||| |||||||| ||||       ||||||||||||||| |     
T  7703629 tgaacttttgatgtcaccgtacaaacagtggggtgttactgacaacacttttgatgttatagtgttaacttcaccagaaaagtcattctcatgactttaa 7703530  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  7703529 catagaatttt 7703519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 34948196 - 34948306
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | | ||||||| |||||||||||||||  ||| ||||||||||||| |||||||| | ||       ||||||||||||||||||    
T  34948196 tgaacttttgatgccactttacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcgccagaaaagtcattctcatgacttcac 34948295  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  34948296 cataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 50697354 - 50697289
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgtt 83  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| |||||| |||||||| ||||    
T  50697354 tgaacttttgatgtcattgtacaaacggtagggtgttactcgttatattttttatgttatagtgtt 50697289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 9139357 - 9139244
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    ||||||||| |||| | ||||||||||||||||||||||||| |  |||||| ||| ||||| ||||||| ||||       ||| | ||||||||||||    
T  9139357 tgaactttttatgtcactgtacaaacggtggggtgttactcact--attttttatgctataacgttaacttcaccaaaaaagtcaatttcatgacttcac 9139260  T
Q  118 catagaatttttctta 133  Q
    ||||||||||| ||||    
T  9139259 catagaattttcctta 9139244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 47253860 - 47253749
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | |||| ||||  |||| |||||||||  ||| |||||||| |||| |||||||| ||||       ||||||||||||||||||    
T  47253860 tgaacttttgatgtcactgtataaacaatggg-tgttactcacaacacttttgatgatatagtgttaacttcaccaaaaaagtcattctcatgacttcac 47253762  T
Q  118 catagaatttttc 130  Q
    |||||||||||||    
T  47253761 catagaatttttc 47253749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 54499337 - 54499412
Alignment:
Q  18 tgaacttttgatgtgatt-gtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||| ||| ||||||||||||||||||||||||  ||| |||||||| |||| |||||||| ||||    
T  54499337 tgaacttttgatgtcattagtacaaacggtggggtgttactcacaacacttttgatgctatagtgttaacttcacc 54499412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 4205221 - 4205118
Alignment:
Q  25 ttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaa 124  Q
    ||||||| ||||||||||| ||||||||||| |||  ||||||||||| ||||| |||||||| || |       ||||| || ||||||||||||||||    
T  4205221 ttgatgtcattgtacaaacagtggggtgttattcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaa 4205122  T
Q  125 tttt 128  Q
    ||||    
T  4205121 tttt 4205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 37287846 - 37287735
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc-nnnnnnntcattctcatgacttca 116  Q
    |||||||||||||  | ||||||||| |||||||||||||||  ||| ||||||||||||| ||||||||  |||        |||||||||| ||||||    
T  37287846 tgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaactttaccaaaaaaagtcattctcattacttca 37287747  T
Q  117 ccatagaatttt 128  Q
    ||||||||||||    
T  37287746 ccatagaatttt 37287735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 49376079 - 49375968
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc-nnnnnnntcattctcatgacttca 116  Q
    |||||||||||||  | ||||||| | |||||||||||||||  ||| |||||||| ||||||||||||| ||||        |||||||||||||||||    
T  49376079 tgaacttttgatgccactgtacaagcagtggggtgttactcacgacacttttgatgctataatgttaacttcaccagaaaaagtcattctcatgacttca 49375980  T
Q  117 ccatagaatttt 128  Q
    || |||||||||    
T  49375979 ccgtagaatttt 49375968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 4598104 - 4597995
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||| |||||||||||||||  |||  |||||||||||| |||||||| ||||       ||||||| ||||||||||    
T  4598104 tgaacttttgatgccactgtacaaacagtggggtgttactcacaaca-ctttgatgttatagtgttaacttcaccagaaaagtcattctaatgacttcac 4598006  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  4598005 cataaaatttt 4597995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 28003085 - 28003195
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| |||| ||  |||| | |||| |||||||| |||| |||| ||| ||||       ||||||||||||||||||    
T  28003085 tgaacttttgatgtcactgtacaaacagtggagtactactgactacacttttgatgctatagtgttgacttcaccagaaaagtcattctcatgacttcac 28003184  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  28003185 catagaatttt 28003195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 38011966 - 38011856
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  |  |||||||| |||||||| || ||| |||| ||||||||||||| |||| ||| ||||       |||||||||||| |||||    
T  38011966 tgaacttttgatggcaccgtacaaacagtggggtgctattcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgatttcac 38011867  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  38011866 catagaatttt 38011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 42199841 - 42199731
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    ||||||||| |||| ||| ||||||   |||||| |||||||||||||||||||||||||| | |||||| ||||       ||||||| |||| |||||    
T  42199841 tgaactttttatgtcattctacaaataatggggtattactcattacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgatttcac 42199742  T
Q  118 catagaatttt 128  Q
    |||||| ||||    
T  42199741 catagattttt 42199731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 53124372 - 53124325
Alignment:
Q  45 gtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  53124372 gtggggtgttactcattatatttttgatgttatagtgttaacttcacc 53124325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 6864144 - 6864038
Alignment:
Q  21 acttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccat 120  Q
    ||||||||||  ||||||||||  || || ||||| |||||| ||||||||||||||| || ||||| ||||       ||||||||||||| |||||||    
T  6864144 acttttgatgctattgtacaaaaagttggatgttattcattaaatttttgatgttatagtgataacttcaccaaaaaagtcattctcatgacatcaccat 6864045  T
Q  121 agaattt 127  Q
    | |||||    
T  6864044 acaattt 6864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 23761184 - 23761115
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| | | ||||||| ||| |||||||||||  ||| ||||||||||||| ||||||||    
T  23761184 tgaacttttgatgtcactatacaaacagtgaggtgttactcacaacacttttgatgttatagtgttaact 23761115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 30002723 - 30002833
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| ||| |||||||||||  ||| |||||||| || | |||||||| ||||       ||||| | ||||||||||    
T  30002723 tgaacttttgatgtcactgtacaaacagtgaggtgttactcacaacacttttgatgctacagtgttaacttcaccagaaaaatcattttaatgacttcac 30002822  T
Q  118 catagaatttt 128  Q
    |||||| ||||    
T  30002823 catagagtttt 30002833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 35025687 - 35025797
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| |  ||| |||| |||||||| |||||| |||| |||||||| |||| |||| ||| ||||       ||||| |||||||||||     
T  35025687 tgaacttttgatgtcaacgtataaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcattttcatgacttcag 35025786  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  35025787 catagaatttt 35025797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 55241203 - 55241313
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||| ||||||||||||||   ||| |||||||  |||| | |||||| |||        ||||||||||||||||||    
T  55241203 tgaacttttgatgccactgtacaaacagtggggtgttactcgcaacaattttgataatatagtattaacttcactagaaaagtcattctcatgacttcac 55241302  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  55241303 catagaatttt 55241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 37775780 - 37775671
Alignment:
Q  19 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacc 118  Q
    ||||||||||||  | ||||||||| |||||||||||||||  |||||||| || ||||| || ||||| ||||       ||||| | |||||||||||    
T  37775780 gaacttttgatgccactgtacaaacagtggggtgttactcacaacatttttaatattatagtgctaacttcaccaaaaaaatcattttaatgacttcacc 37775681  T
Q  119 atagaatttt 128  Q
     |||||||||    
T  37775680 gtagaatttt 37775671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 50764842 - 50764784
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgtta 76  Q
    |||||||||||||| |  |||||||| |||||||||||||||  ||| |||||||||||    
T  50764842 tgaacttttgatgtcaccgtacaaacagtggggtgttactcacaacacttttgatgtta 50764784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 129
Target Start/End: Original strand, 20097509 - 20097538
Alignment:
Q  100 tcattctcatgacttcaccatagaattttt 129  Q
    ||||||||||||||||||||||||||||||    
T  20097509 tcattctcatgacttcaccatagaattttt 20097538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 133
Target Start/End: Original strand, 38812278 - 38812311
Alignment:
Q  100 tcattctcatgacttcaccatagaatttttctta 133  Q
    ||||||||||||||||||||||||||||| ||||    
T  38812278 tcattctcatgacttcaccatagaattttcctta 38812311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 38811843 - 38811815
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  38811843 tcattctcatgacttcaccatagaatttt 38811815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 18422759 - 18422649
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||       ||||| | ||||||||||    
T  18422759 tgaacttttgatgtcattgtacaaacggtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcac 18422660  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  18422659 catagaatttt 18422649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 32267142 - 32267032
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||        ||||||| ||||||||||    
T  32267142 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatattgttaacttcacaaaaaaagtcattcttatgacttcac 32267043  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  32267042 cataaaatttt 32267032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 10922835 - 10922725
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||| ||||       |||||||||||| |||||    
T  10922835 tgaacttttgatgtcattgtacaaacagtggggtcttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcattctcatgatttcac 10922736  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  10922735 cataaaatttt 10922725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 15752137 - 15752025
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||| ||| ||||||||||| || |||||| |||||||| |||||||| ||||       ||||||||||||||||||    
T  15752137 tgaacttttgatgccattgtacaaacagtgaggtgttactcactatattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 15752038  T
Q  118 catagaatttttc 130  Q
    |||||||||||||    
T  15752037 catagaatttttc 15752025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 15383041 - 15382931
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||| |||||| | ||||       ||||| | || |||||||    
T  15383041 tgaacttttgatgacattgtacaaacggtgggatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcatttttataacttcac 15382942  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  15382941 catagaatttt 15382931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 37451394 - 37451325
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| ||||||||    
T  37451394 tgaacttttgatgtcattgtacaaacggtagggtgttacttattacatttttgatgttatagtgttaact 37451325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 51128967 - 51128898
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  51128967 tgaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaact 51128898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 19899837 - 19899947
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||| ||||||| ||| |||||||||| ||||||||||||||||||| |||||||| ||||       ||||| | ||||||||||    
T  19899837 tgaacttttgatgccattctacaaacagtgaggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcattattatgacttcac 19899936  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  19899937 catagaatttt 19899947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 28564849 - 28564918
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||    
T  28564849 tgaacttttgatgtcattgtacaaacagtaaggtgttactcattacatttttgatgttatagtgttaact 28564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 37618962 - 37619074
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgtt--actcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttc 115  Q
    |||||||||||||| ||| ||||||| ||||||||||  |||||||| ||||||||||||||| |||||||| ||||       ||||||| || |||||    
T  37618962 tgaacttttgatgtcattttacaaacagtggggtgttttactcattaaatttttgatgttatagtgttaacttcaccaaaaaagtcattcttataacttc 37619061  T
Q  116 accatagaatttt 128  Q
    |||||||||||||    
T  37619062 accatagaatttt 37619074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 30327020 - 30327087
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaa 85  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  30327020 tgaacttttgatgctattgtacaaacggttgggtattactcattacatttttgatgttatagtgttaa 30327087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 1547395 - 1547285
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | || |||||| |||| ||||||||||  |||||||| |||||||| |||||||| ||||       ||||||||||||||||||    
T  1547395 tgaacttttgatgccactgcacaaacagtggagtgttactcacaacattttttatgttatagtgttaacttcaccagaaaagtcattctcatgacttcac 1547296  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  1547295 catagaatttt 1547285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 2959856 - 2959746
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| ||||| ||||||| | |||| ||||||||||||| |||||||| || |       ||||| ||||||||||||    
T  2959856 tgaacttttgatgtcactgtacaaacagtgggatgttacttactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcac 2959757  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  2959756 catagaatttt 2959746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 30254531 - 30254422
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| ||| | | |||||||||||||||||||||||||| |||||||| || |       ||||||| || |||||||    
T  30254531 tgaacttttgatgtcattgtacaaacagtgtg-tattactcattacatttttgatgttatattgttaacttcaacaaaaaagtcattcttataacttcac 30254433  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  30254432 catagaatttt 30254422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 28769759 - 28769649
Alignment:
Q  19 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacc 118  Q
    |||| |||||||  ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||        | ||| | |||||||||||    
T  28769759 gaacctttgatgccattgtacaaacggtggg-tgttactcattacatttttgatgtcatagtgttaacttcacaaaaaaagttatttttatgacttcacc 28769661  T
Q  119 atagaatttttc 130  Q
    ||||||||||||    
T  28769660 atagaatttttc 28769649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 32216163 - 32216089
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    ||||||||||| |  ||||||||||| |||| |||||||||| |||||||||||||||||| |||||||| ||||    
T  32216163 tgaacttttgacgccattgtacaaacagtggtgtgttactcactacatttttgatgttatagtgttaacttcacc 32216089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 9903122 - 9903191
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| | ||||||||| | ||||||||||||| |||| ||||||||||||| ||||||||    
T  9903122 tgaacttttgatgtcactgtacaaacagcggggtgttactcactacagttttgatgttatagtgttaact 9903191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 23999455 - 23999345
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||| ||||||  |||||||||||||| ||| |||||| ||||| || |||||||| ||||       ||||||| ||||||||||    
T  23999455 tgaacttttgatgtcattctacaaatagtggggtgttactcgttatattttttatgttgtagtgttaacttcaccaaaaaaatcattcttatgacttcac 23999356  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  23999355 cataaaatttt 23999345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 42721147 - 42721037
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| ||||||||||||||| || |||||| ||| ||||  | ||||| ||||       ||||| ||||||||||||    
T  42721147 tgaacttttgatgttactgtacaaacagtggggtgttactcactatattttttatgatatagggctaacttcaccaaaaaaatcattttcatgacttcac 42721048  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  42721047 catagaatttt 42721037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 48620745 - 48620676
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| | ||||||||| |||||||||||||||  ||| ||||||||||||| ||||||||    
T  48620745 tgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgttatattgttaact 48620676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 8222236 - 8222124
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||   |||||| |||||||||||||||||||||||||||||| |||||||| |||        ||||| | ||||||||||    
T  8222236 tgaacttttgatgccattgta---acggtgtggtgttactcattacatttttgatgttatagtgttaacttcactaaaaaggtcatttttatgacttcac 8222140  T
Q  118 catagaatttttctta 133  Q
    | ||||||||| ||||    
T  8222139 cgtagaattttcctta 8222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 27763382 - 27763447
Alignment:
Q  21 acttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||||||| ||| |||||||  |||| |||||||||||||||||||||||||||| ||||||||    
T  27763382 acttttgatgtcattctacaaactatggg-tgttactcattacatttttgatgttatagtgttaact 27763447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 46931500 - 46931450
Alignment:
Q  37 tacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  46931500 tacaaacagtggggtattactcattacatttttgatgttatagtgttaact 46931450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 34012445 - 34012555
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | | ||||||| |||| |||||||||| |||| | ||||||||||| |||||||| || |       ||||| ||||||||||||    
T  34012445 tgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcataaacgtcattttcatgacttcac 34012544  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  34012545 catagaatttt 34012555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 38823322 - 38823212
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||  ||||||||||||||   ||| |||||||| |||| ||||||||  |||       ||||||||||||||||||    
T  38823322 tgaacttttgatgacactgtacaaatagtggggtgttactcgcaacaattttgatgctatagtgttaacttaaccagaaaagtcattctcatgacttcac 38823223  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  38823222 catagaatttt 38823212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 47279297 - 47279196
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||| ||||  | ||||||||| |||||||||||||||  ||| |||||||  ||||||||||||| ||||       ||||||||||||||||||    
T  47279297 tgaactttcgatgccactgtacaaacagtggggtgttactcacaacacttttgatagtataatgttaacttcaccaaaaaaatcattctcatgacttcac 47279198  T
Q  118 ca 119  Q
    ||    
T  47279197 ca 47279196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 16415723 - 16415643
Alignment:
Q  48 gggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||| |||| |||||||| |||| |||||||| ||||       ||||||||||||||||||| |||||||||    
T  16415723 gggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccttagaatttt 16415643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 30254950 - 30254856
Alignment:
Q  33 attgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    ||||||||||| ||||| |||||  ||||||||||||||||||||| |||||||| || |       ||||| | |||||||||||||||||||||    
T  30254950 attgtacaaacagtggg-tgttatccattacatttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaatttt 30254856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 10182076 - 10182186
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||| |||| ||||||| || || |||||| |||||| | | |||||| ||||       ||||| ||||||||||||    
T  10182076 tgaacttttgatgccactgtacaaacagtggcgtgttacgcactatattttttatgttacagttttaacttcaccaaaaaagtcattttcatgacttcac 10182175  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  10182176 catagaatttt 10182186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 11742418 - 11742528
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| ||||||||||||| |  ||| |||||||  |||| |||||||| ||||       |||||||||| |||||||    
T  11742418 tgaacttttgatgtcactgtacaaacagtggggtgttacttacaacacttttgataatatagtgttaacttcaccagaaaagtcattctcataacttcac 11742517  T
Q  118 catagaatttt 128  Q
     ||| ||||||    
T  11742518 gataaaatttt 11742528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 21289780 - 21289729
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacattttt 69  Q
    |||||||||||||  | ||||||||| ||||||||||||||| |||||||||    
T  21289780 tgaacttttgatgccactgtacaaacagtggggtgttactcactacattttt 21289729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 3535040 - 3534971
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| | || |||||| ||  |||||||||||  ||| ||||||||||||| ||||||||    
T  3535040 tgaacttttgatgtcactgcacaaacagtaaggtgttactcacaacacttttgatgttatagtgttaact 3534971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 14758149 - 14758039
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  |  |||||||| || | ||| |||||| |||| ||||||||||||| |||| ||| ||||       ||||||||||||||||||    
T  14758149 tgaacttttgatgccaccgtacaaacagttgtgtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttcac 14758050  T
Q  118 catagaatttt 128  Q
    | || ||||||    
T  14758049 cgtaaaatttt 14758039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 27563973 - 27564042
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||||| | | ||||||| |||| |||||||||| || |||||| | |||||| ||||||||    
T  27563973 tgaacttttgatgtcactatacaaacagtggagtgttactcactatatttttaaagttatagtgttaact 27564042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 27227627 - 27227655
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  27227627 tcattctcatgacttcaccatagaatttt 27227655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 43579272 - 43579244
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  43579272 tcattctcatgacttcaccatagaatttt 43579244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 33551078 - 33551187
Alignment:
Q  19 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacc 118  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| |||        |||||||||||||||||||    
T  33551078 gaacttttgatgtcattgtacaaacagtggggtgttactcactacatttttgatgttatagtgttaacttcactaaaaaagtcattctcatgacttcacc 33551177  T
Q  119 atagaatttt 128  Q
     |||||||||    
T  33551178 gtagaatttt 33551187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 37905820 - 37905746
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||    
T  37905820 tgaacttttgatgtcattgtacaaacggtggggtgttactcgttacattttttatgttatagtgttaacttcacc 37905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 13711574 - 13711466
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 119  Q
    |||||||||||| | ||||||||| |||||||||||||||  ||| |||||||| ||||||||||||| ||||       ||||||| ||||||||||||    
T  13711574 aacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtcattctgatgacttcacca 13711475  T
Q  120 tagaatttt 128  Q
    |||||||||    
T  13711474 tagaatttt 13711466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 43648336 - 43648410
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  43648336 tgaacttttgatgtcattatacaaacagtgaggtgttactcattacatttttgatgttatagtgttaacttcacc 43648410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 4167034 - 4166918
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||| |||||||||||||||  | |||||||||  ||||||||||||| ||||       ||||| || |||||||||    
T  4167034 tgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatactataatgttaacttcaccagaaaagtcattttcgtgacttcac 4166935  T
Q  118 catagaatttttcttat 134  Q
    ||||||||||| |||||    
T  4166934 catagaattttccttat 4166918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 19289416 - 19289483
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||||| ||||||||    
T  19289416 aacttttgatgtcattgtacaaacaatggggtgttactcattatatttttgatgttatagtgttaact 19289483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 11366472 - 11366582
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||| ||||||  ||| | |||||||||||||||||||||||||||| |||||| | ||||       ||||||| |||| |||||    
T  11366472 tgaacttttgatgtcattatacaaatagtgagatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcattcttatgatttcac 11366571  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  11366572 catagaatttt 11366582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 26357689 - 26357579
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| ||||| ||||||||| |||| ||||||||||||| |||||||| || |       ||||| ||||||||||||    
T  26357689 tgaacttttgatgtcactgtacaaacagtgggatgttactcactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcac 26357590  T
Q  118 catagaatttt 128  Q
    |||| ||||||    
T  26357589 cataaaatttt 26357579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 17054190 - 17054297
Alignment:
Q  21 acttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccat 120  Q
    ||||||||||| |||||||||||  || | ||||||| | |||||||||||||||||| | |||||| ||||       |||||| ||||||||||||||    
T  17054190 acttttgatgtcattgtacaaacaatgagatgttacttactacatttttgatgttatagtattaacttcaccaaaaaagtcattcgcatgacttcaccat 17054289  T
Q  121 agaatttt 128  Q
    ||||||||    
T  17054290 agaatttt 17054297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 36642098 - 36641983
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| ||| ||||||||||   ||| |||||||| |||| | |||| | ||||       ||||||||||||||||||    
T  36642098 tgaacttttgatgtcactgtacaaacagtgaggtgttactcgcaacacttttgatgctatagtattaatttcaccagaaaagtcattctcatgacttcac 36641999  T
Q  118 catagaatttttctta 133  Q
    ||||||||||||||||    
T  36641998 catagaatttttctta 36641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 43770930 - 43771041
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | |||| |||| |||||||||||||||  ||| ||||||||||||| |||||||| ||||       ||||||| ||||||||||    
T  43770930 tgaacttttgatgccactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcacc-aaaaaatcattctaatgacttcac 43771028  T
Q  118 catagaatttttc 130  Q
    |||||||||||||    
T  43771029 catagaatttttc 43771041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 2325461 - 2325571
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | |||||||||  |||||||||||||| ||||||| |||||||||| |||||||| |||        |||||| ||| |||||||    
T  2325461 tgaacttttgatgccagtgtacaaacaatggggtgttactcaatacatttatgatgttatattgttaacttcacgagaaaagtcattcacataacttcac 2325560  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  2325561 catagaatttt 2325571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 35959021 - 35958911
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    ||||||||| |||| ||||||||||| |||||||||| |||||||||||||| |||||||| ||  |||| ||||       ||||| | |||||||||     
T  35959021 tgaacttttaatgtcattgtacaaacagtggggtgttgctcattacattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttcat 35958922  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  35958921 catagaatttt 35958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 17071829 - 17071938
Alignment:
Q  19 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacc 118  Q
    ||||||||||||| ||||||||||   || | ||||||| | |||||||||| ||||||| |||||||| ||||       |||||| ||||||||||||    
T  17071829 gaacttttgatgtcattgtacaaataatgagatgttacttactacatttttgttgttatagtgttaacttcaccaaaaaagtcattcgcatgacttcacc 17071928  T
Q  119 atagaatttt 128  Q
    ||||||||||    
T  17071929 atagaatttt 17071938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 41463941 - 41464054
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||| ||| |||||||||||  ||| ||||||| ||||| | |||||| ||||       ||||||||| ||||||||    
T  41463941 tgaacttttgatgccactgtacaaacagtgaggtgttactcacaacacttttgattttatagtattaacttcaccaaaaatgtcattctcacgacttcac 41464040  T
Q  118 catagaatttttct 131  Q
    ||||||||||||||    
T  41464041 catagaatttttct 41464054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 27350029 - 27350103
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||| | ||||||||| ||| |||||||||||  |||||||||||| |||| |||||||| ||||    
T  27350029 tgaacttttgatgtcactgtacaaacagtgtggtgttactcacaacatttttgatgctatagtgttaacttcacc 27350103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 4264168 - 4264278
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | ||||||||| ||||| |||||||||  ||| |||||||| |||| ||||||||  |||       ||||| | ||||||||||    
T  4264168 tgaacttttgatgtcactgtacaaacagtgggatgttactcacaacacttttgatgctatagtgttaactttaccagaaaagtcattatgatgacttcac 4264267  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  4264268 catagaatttt 4264278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 19313964 - 19313854
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| | |||| |||  ||  |||||||||||  ||| |||||||| ||||||||||||| ||||       ||||||| ||||||||||    
T  19313964 tgaacttttgatgtcactgtataaatagtaaggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtcattctaatgacttcac 19313865  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  19313864 catagaatttt 19313854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 3177051 - 3176938
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||||||||||| || | ||||||||||  ||||||||||| ||||| | |||||| || |       ||||| || | |||||||    
T  3177051 tgaacttttgatgtcattgtacaaacagttgcgtgttactcaaaacatttttgatattatagtattaacttcatcagaaaagtcattttcgtaacttcac 3176952  T
Q  118 catagaatttttct 131  Q
    ||||||||||||||    
T  3176951 catagaatttttct 3176938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 33660459 - 33660571
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  | ||||||||| || ||||||||||||  ||| ||||||||||||| ||||||||  ||        ||||| | ||||||||||    
T  33660459 tgaacttttgatgccactgtacaaacagttgggtgttactcacaacacttttgatgttatagtgttaacttaactagaaaagtcattttaatgacttcac 33660558  T
Q  118 catagaatttttc 130  Q
    |||||||||||||    
T  33660559 catagaatttttc 33660571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 33902178 - 33902120
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgtta 76  Q
    |||||||||||||| ||| ||||||| ||||||| ||||||| ||||||||| ||||||    
T  33902178 tgaacttttgatgtcattttacaaacagtggggtattactcactacattttttatgtta 33902120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 4763743 - 4763678
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgtt 83  Q
    |||||||||||||| | ||||||||| ||||||||||||||| |||| ||||| || |||| ||||    
T  4763743 tgaacttttgatgtcactgtacaaacagtggggtgttactcactacagttttgttgatatagtgtt 4763678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 41465591 - 41465511
Alignment:
Q  48 gggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    ||||| |||||| ||||  ||||||| |||| |||||||| ||||       |||||||||||||||||||||||||||||    
T  41465591 gggtgctactcactacacctttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 41465511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 18494386 - 18494469
Alignment:
Q  45 gtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||  ||| |||||||| |||| |||||||| ||||       ||||| |||||||||||||| ||||||||    
T  18494386 gtggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcaccacagaatttt 18494469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 33709323 - 33709397
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||||| | ||||| ||| |||| |||||||||   ||| ||||||||||||| |||||||| ||||    
T  33709323 tgaacttttgatgtcactgtactaacagtggagtgttactcgcaacacttttgatgttatagtgttaacttcacc 33709397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 39167454 - 39167495
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactca 59  Q
    |||||||||||||| ||||||||||| ||| |||||||||||    
T  39167454 tgaacttttgatgtcattgtacaaacagtgaggtgttactca 39167495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 4478479 - 4478407
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 92  Q
    |||||||||||  | |||||||||  ||| ||||||||||  ||| ||||||||||||| |||||||| ||||    
T  4478479 aacttttgatgccactgtacaaacaatggagtgttactcacaacacttttgatgttatagtgttaacttcacc 4478407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 7007063 - 7007091
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  7007063 tcattctcatgacttcaccatagaatttt 7007091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 43446480 - 43446508
Alignment:
Q  100 tcattctcatgacttcaccatagaatttt 128  Q
    |||||||||||||||||||||||||||||    
T  43446480 tcattctcatgacttcaccatagaatttt 43446508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 146089 - 146201
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||| ||| ||||||   |||||||||||||||||||||||| |||||||||||||||||  |||       ||||||| ||||||||||    
T  146089 tgaacttttgatgtcattctacaaataatggggtgttactcattacattttttatgttataatgttaacttaaccaaaaaaatcattcttatgacttcac 146188  T
Q  118 catagaatttttc 130  Q
    | |||||||||||    
T  146189 cgtagaatttttc 146201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 94458 - 94525
Alignment:
Q  20 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 87  Q
    |||||||||||  | ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  94458 aacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttataatgttaact 94525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 408501 - 408559
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgtta 76  Q
    |||||||||||| | ||| ||||||||||  ||||||||||||||||||||||||||||    
T  408501 tgaacttttgatttcattttacaaacggtaaggtgttactcattacatttttgatgtta 408559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 246 - 136
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    |||||||||||||  ||||||||||| |||| ||||||||||  |||||||| ||  || | |||||||| ||||       ||||| || |||||||||    
T  246 tgaacttttgatgccattgtacaaacagtggagtgttactcacaacattttttatactacagtgttaacttcaccagaaaagtcattttcgtgacttcac 147  T
Q  118 catagaatttt 128  Q
    |||||||||||    
T  146 catagaatttt 136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 44069 - 43957
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    ||||||||| |||  |||||||||||   |||||||||||||||||||||||||| |||||  ||||||| ||||       || |||| | ||||||||    
T  44069 tgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtctttcttacgacttcac 43970  T
Q  118 catagaatttttc 130  Q
    |||||||||||||    
T  43969 catagaatttttc 43957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 154718 - 154830
Alignment:
Q  18 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 117  Q
    ||||||||| |||  |||||||||||   |||||||||||||||||||||||||| |||||  ||||||| ||||       || |||| | ||||||||    
T  154718 tgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtctttcttacgacttcac 154817  T
Q  118 catagaatttttc 130  Q
    |||||||||||||    
T  154818 catagaatttttc 154830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 100886 - 100823
Alignment:
Q  65 tttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 128  Q
    ||||||||||||||  ||||||| ||||       |||||||||||||||||||||||||||||    
T  100886 tttttgatgttatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaatttt 100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University