View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4657-Insertion-12 (Length: 225)
Name: NF4657-Insertion-12
Description: NF4657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4657-Insertion-12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 45601679 - 45601898
Alignment:
| Q |
7 |
aaggacttggtagtaggtatgaatcatgatatgttaaactagaaacgctgtcattttctccatttt-ttgcatcgaaattctgtggtcacaaacattaag |
105 |
Q |
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| T |
45601679 |
aaggacttggtagtaggtatgaatcatgatatgttaaactagaaacgctgtcattttctccatttttttgcatcgaaattatgtggtcacaaacattaag |
45601778 |
T |
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| Q |
106 |
ttatggtgtagcattttgaatttgatcgttaatggcgcagaaaacgctaatgagcgatcaacacgactggggaatttgtagaataaagtgaatgcaatgt |
205 |
Q |
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| T |
45601779 |
ttatggtgtagcattttgaatttgatggataatggcgaagaaaacgctaatgagcgatcaacacgactggggaatttgtagaataaagtgaatgcaatgt |
45601878 |
T |
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| Q |
206 |
gcacgataagttaatgggag |
225 |
Q |
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| T |
45601879 |
gcacgataagttaatgggag |
45601898 |
T |
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