View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4657-Insertion-5 (Length: 826)

Name: NF4657-Insertion-5
Description: NF4657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4657-Insertion-5
NF4657-Insertion-5
[»] chr8 (26 HSPs)
chr8 (17-826)||(20232177-20232992)
chr8 (229-376)||(17607201-17607356)
chr8 (282-378)||(38287787-38287882)
chr8 (229-357)||(35908658-35908795)
chr8 (282-357)||(18464049-18464124)
chr8 (282-383)||(8605444-8605544)
chr8 (230-359)||(15711474-15711612)
chr8 (282-357)||(14019787-14019862)
chr8 (282-374)||(9596043-9596134)
chr8 (282-333)||(8276552-8276603)
chr8 (282-377)||(39587908-39588001)
chr8 (235-357)||(38287957-38288088)
chr8 (282-357)||(9596269-9596343)
chr8 (282-333)||(18905859-18905910)
chr8 (282-333)||(20298566-20298617)
chr8 (282-333)||(21085198-21085249)
chr8 (282-333)||(32931404-32931455)
chr8 (282-333)||(34248362-34248413)
chr8 (282-328)||(35561674-35561720)
chr8 (282-333)||(14582233-14582284)
chr8 (282-333)||(23027555-23027606)
chr8 (282-333)||(23027878-23027929)
chr8 (282-333)||(34248080-34248131)
chr8 (282-328)||(5720917-5720963)
chr8 (464-498)||(14019786-14019820)
chr8 (282-328)||(43599319-43599365)
[»] chr7 (46 HSPs)
chr7 (17-826)||(44314084-44314899)
chr7 (229-378)||(47346081-47346240)
chr7 (229-402)||(36270457-36270645)
chr7 (235-383)||(37755932-37756089)
chr7 (229-408)||(36495813-36496006)
chr7 (233-357)||(34748757-34748891)
chr7 (229-359)||(33909114-33909254)
chr7 (229-357)||(47346310-47346448)
chr7 (229-378)||(24240181-24240324)
chr7 (229-357)||(27585235-27585373)
chr7 (229-357)||(36270684-36270822)
chr7 (235-357)||(37756158-37756289)
chr7 (232-357)||(36495645-36495780)
chr7 (229-357)||(34914907-34915045)
chr7 (235-357)||(37761906-37762037)
chr7 (282-359)||(39550028-39550104)
chr7 (229-357)||(24240393-24240515)
chr7 (282-378)||(19843666-19843761)
chr7 (282-357)||(20296243-20296317)
chr7 (282-370)||(36092442-36092528)
chr7 (282-333)||(43384330-43384381)
chr7 (282-357)||(37530973-37531050)
chr7 (282-357)||(22206328-22206402)
chr7 (282-357)||(22228337-22228411)
chr7 (282-357)||(36092649-36092722)
chr7 (282-360)||(22686783-22686860)
chr7 (244-333)||(7135245-7135344)
chr7 (282-333)||(257317-257368)
chr7 (464-499)||(27585233-27585268)
chr7 (282-331)||(40121989-40122038)
chr7 (285-333)||(1663658-1663706)
chr7 (282-377)||(43383996-43384085)
chr7 (282-333)||(1661241-1661292)
chr7 (290-357)||(19843464-19843530)
chr7 (228-353)||(27729460-27729598)
chr7 (282-333)||(28910035-28910086)
chr7 (282-333)||(37272095-37272146)
chr7 (282-333)||(41670586-41670637)
chr7 (282-333)||(43167943-43167994)
chr7 (282-328)||(6813128-6813174)
chr7 (282-316)||(14991559-14991593)
chr7 (282-316)||(15421170-15421204)
chr7 (235-281)||(33909371-33909417)
chr7 (282-328)||(36237810-36237856)
chr7 (464-497)||(24240270-24240303)
chr7 (411-448)||(27585295-27585332)
[»] chr1 (38 HSPs)
chr1 (229-383)||(17294931-17295095)
chr1 (229-383)||(29228628-29228792)
chr1 (229-357)||(29228427-29228565)
chr1 (282-378)||(30604510-30604606)
chr1 (300-383)||(17294820-17294903)
chr1 (286-378)||(4187336-4187428)
chr1 (233-357)||(4187505-4187638)
chr1 (239-359)||(51722230-51722361)
chr1 (229-357)||(33562114-33562252)
chr1 (609-739)||(39637451-39637581)
chr1 (609-739)||(39646119-39646249)
chr1 (299-379)||(31411425-31411505)
chr1 (229-357)||(12287828-12287965)
chr1 (229-357)||(31411543-31411685)
chr1 (283-357)||(45443200-45443273)
chr1 (229-357)||(45858635-45858772)
chr1 (284-357)||(29383675-29383747)
chr1 (282-358)||(40521543-40521618)
chr1 (299-408)||(45858802-45858916)
chr1 (282-357)||(18585018-18585092)
chr1 (282-357)||(40642826-40642903)
chr1 (282-333)||(28509437-28509488)
chr1 (282-356)||(27958097-27958170)
chr1 (282-375)||(27957859-27957950)
chr1 (282-333)||(2697381-2697432)
chr1 (282-333)||(4022175-4022226)
chr1 (282-333)||(19937093-19937144)
chr1 (282-333)||(17419790-17419841)
chr1 (282-333)||(38474286-38474337)
chr1 (283-333)||(8520144-8520194)
chr1 (282-333)||(31305714-31305765)
chr1 (282-333)||(37600875-37600926)
chr1 (287-333)||(20208137-20208183)
chr1 (287-333)||(20208436-20208482)
chr1 (282-328)||(39649134-39649180)
chr1 (411-448)||(45443259-45443296)
chr1 (407-448)||(45858694-45858735)
chr1 (464-497)||(51722232-51722265)
[»] chr5 (40 HSPs)
chr5 (233-383)||(83802-83961)
chr5 (229-357)||(5095888-5096021)
chr5 (290-378)||(33040243-33040331)
chr5 (233-377)||(22196317-22196470)
chr5 (229-357)||(32395301-32395439)
chr5 (288-408)||(33040392-33040518)
chr5 (235-357)||(84027-84159)
chr5 (229-358)||(29396330-29396469)
chr5 (233-357)||(30329815-30329949)
chr5 (229-357)||(2471680-2471817)
chr5 (295-403)||(18541878-18541991)
chr5 (239-359)||(22196550-22196679)
chr5 (283-357)||(14769883-14769956)
chr5 (229-359)||(24792254-24792394)
chr5 (229-374)||(30330024-30330180)
chr5 (319-408)||(946811-946907)
chr5 (282-358)||(19439839-19439914)
chr5 (282-360)||(9850446-9850527)
chr5 (282-333)||(38131767-38131818)
chr5 (285-328)||(395375-395418)
chr5 (282-333)||(873746-873797)
chr5 (282-333)||(1028143-1028194)
chr5 (282-333)||(29432415-29432466)
chr5 (282-357)||(33040042-33040117)
chr5 (282-333)||(37995684-37995735)
chr5 (282-333)||(39668467-39668518)
chr5 (323-377)||(24792192-24792246)
chr5 (283-333)||(27760078-27760128)
chr5 (282-358)||(18541702-18541776)
chr5 (282-333)||(396263-396314)
chr5 (282-333)||(13843700-13843751)
chr5 (282-333)||(13844016-13844067)
chr5 (319-357)||(946722-946760)
chr5 (231-281)||(24792111-24792161)
chr5 (283-333)||(28009848-28009898)
chr5 (282-324)||(30870935-30870977)
chr5 (282-328)||(35527038-35527084)
chr5 (282-328)||(38376739-38376785)
chr5 (282-328)||(43490306-43490352)
chr5 (282-327)||(3762915-3762960)
[»] chr4 (43 HSPs)
chr4 (233-408)||(46528914-46529104)
chr4 (233-357)||(11290148-11290282)
chr4 (233-358)||(50868004-50868139)
chr4 (282-401)||(52810675-52810799)
chr4 (229-357)||(33912023-33912160)
chr4 (285-355)||(47845769-47845839)
chr4 (285-358)||(4026052-4026124)
chr4 (228-357)||(2016512-2016650)
chr4 (282-357)||(37097781-37097855)
chr4 (282-359)||(5427106-5427182)
chr4 (282-359)||(52810902-52810978)
chr4 (282-358)||(26941840-26941915)
chr4 (285-357)||(37288922-37288993)
chr4 (282-333)||(51469484-51469535)
chr4 (283-333)||(13254386-13254436)
chr4 (294-383)||(37288700-37288788)
chr4 (303-378)||(42901775-42901851)
chr4 (282-333)||(15665156-15665207)
chr4 (282-333)||(22867087-22867138)
chr4 (282-333)||(29669413-29669464)
chr4 (282-333)||(43972042-43972093)
chr4 (286-333)||(51470486-51470533)
chr4 (282-333)||(53740185-53740236)
chr4 (288-333)||(43798183-43798228)
chr4 (281-333)||(36558515-36558567)
chr4 (282-333)||(29669728-29669779)
chr4 (283-326)||(33797160-33797203)
chr4 (282-333)||(45426986-45427037)
chr4 (310-357)||(47846029-47846076)
chr4 (282-333)||(49544335-49544386)
chr4 (282-333)||(50858331-50858382)
chr4 (282-333)||(53738258-53738309)
chr4 (282-333)||(53739869-53739920)
chr4 (282-333)||(56509612-56509663)
chr4 (282-332)||(990551-990601)
chr4 (282-328)||(3055791-3055837)
chr4 (282-328)||(7198036-7198082)
chr4 (282-328)||(43943681-43943727)
chr4 (282-332)||(43972359-43972409)
chr4 (283-333)||(50858015-50858065)
chr4 (282-328)||(52827282-52827328)
chr4 (229-266)||(42901887-42901924)
chr4 (282-327)||(49380669-49380714)
[»] chr3 (44 HSPs)
chr3 (233-383)||(48511401-48511563)
chr3 (233-378)||(10450415-10450570)
chr3 (233-358)||(10450639-10450774)
chr3 (229-383)||(9180322-9180485)
chr3 (239-357)||(15820602-15820730)
chr3 (233-383)||(40769903-40770062)
chr3 (282-359)||(53966210-53966287)
chr3 (229-357)||(24453758-24453895)
chr3 (227-357)||(42190462-42190601)
chr3 (233-348)||(48511630-48511755)
chr3 (237-357)||(11244536-11244666)
chr3 (282-383)||(22666368-22666467)
chr3 (282-377)||(10453753-10453846)
chr3 (281-358)||(51734606-51734681)
chr3 (282-356)||(9179114-9179187)
chr3 (282-357)||(10856676-10856750)
chr3 (282-333)||(13769341-13769392)
chr3 (282-333)||(45443283-45443334)
chr3 (282-357)||(48837058-48837132)
chr3 (282-333)||(54369042-54369093)
chr3 (282-351)||(9178893-9178961)
chr3 (282-334)||(5321586-5321638)
chr3 (229-354)||(16060872-16061006)
chr3 (229-357)||(16051522-16051659)
chr3 (282-333)||(27219332-27219383)
chr3 (282-333)||(41380727-41380778)
chr3 (282-333)||(43101421-43101472)
chr3 (282-333)||(44573329-44573380)
chr3 (282-333)||(47833712-47833763)
chr3 (284-333)||(2800013-2800062)
chr3 (285-354)||(16045423-16045491)
chr3 (282-333)||(3985776-3985827)
chr3 (282-333)||(34715505-34715556)
chr3 (282-333)||(48685367-48685418)
chr3 (229-276)||(53966323-53966370)
chr3 (282-328)||(4029694-4029740)
chr3 (233-275)||(10856617-10856659)
chr3 (282-328)||(42258918-42258964)
chr3 (282-328)||(49477542-49477588)
chr3 (282-328)||(54495539-54495585)
chr3 (464-497)||(10450516-10450549)
chr3 (464-497)||(10450740-10450773)
chr3 (464-497)||(15820697-15820730)
chr3 (282-331)||(50203907-50203956)
[»] chr2 (50 HSPs)
chr2 (282-383)||(11349843-11349944)
chr2 (229-383)||(11350174-11350338)
chr2 (229-378)||(15961787-15961946)
chr2 (282-408)||(10861884-10862015)
chr2 (229-383)||(10862260-10862423)
chr2 (235-356)||(936792-936923)
chr2 (229-357)||(15962144-15962282)
chr2 (229-357)||(39420676-39420814)
chr2 (229-357)||(10862045-10862182)
chr2 (229-357)||(32810863-32811001)
chr2 (282-357)||(14280259-14280334)
chr2 (282-357)||(4506090-4506164)
chr2 (227-357)||(33532721-33532860)
chr2 (282-357)||(28193625-28193699)
chr2 (304-378)||(15962000-15962080)
chr2 (282-383)||(32197156-32197256)
chr2 (282-358)||(4342308-4342383)
chr2 (285-357)||(28193388-28193459)
chr2 (282-333)||(21213935-21213986)
chr2 (235-358)||(36161340-36161473)
chr2 (235-333)||(17325173-17325281)
chr2 (282-333)||(3976521-3976572)
chr2 (282-333)||(3977053-3977104)
chr2 (464-499)||(14280257-14280292)
chr2 (282-333)||(21214251-21214302)
chr2 (282-333)||(43169245-43169296)
chr2 (282-328)||(26847292-26847338)
chr2 (283-333)||(30166130-30166180)
chr2 (282-334)||(43195786-43195838)
chr2 (286-333)||(3976209-3976256)
chr2 (282-333)||(6183416-6183467)
chr2 (282-333)||(11969055-11969106)
chr2 (298-357)||(17326097-17326155)
chr2 (282-333)||(18901914-18901965)
chr2 (282-333)||(25441699-25441750)
chr2 (282-333)||(44266358-44266409)
chr2 (282-328)||(883651-883697)
chr2 (282-328)||(884065-884111)
chr2 (337-383)||(936992-937038)
chr2 (282-328)||(6986466-6986512)
chr2 (282-328)||(12419846-12419892)
chr2 (282-328)||(12431906-12431952)
chr2 (282-328)||(12432113-12432159)
chr2 (282-328)||(17727412-17727458)
chr2 (464-498)||(32810968-32811002)
chr2 (283-333)||(43688472-43688522)
chr2 (464-497)||(11349885-11349918)
chr2 (464-497)||(11350279-11350312)
chr2 (282-319)||(14289143-14289180)
chr2 (282-327)||(27545166-27545211)
[»] chr6 (23 HSPs)
chr6 (229-357)||(26842699-26842837)
chr6 (282-375)||(33396487-33396579)
chr6 (282-357)||(33396286-33396361)
chr6 (282-408)||(16193943-16194074)
chr6 (229-357)||(25183982-25184120)
chr6 (229-342)||(25184204-25184327)
chr6 (282-358)||(26339892-26339967)
chr6 (282-333)||(8144020-8144071)
chr6 (229-357)||(8427530-8427667)
chr6 (282-333)||(19753654-19753705)
chr6 (282-333)||(21067107-21067158)
chr6 (282-333)||(21088898-21088949)
chr6 (283-333)||(24055160-24055210)
chr6 (282-330)||(1744892-1744940)
chr6 (282-330)||(12134533-12134581)
chr6 (282-334)||(17096748-17096800)
chr6 (464-500)||(26842696-26842732)
chr6 (282-330)||(27443587-27443635)
chr6 (229-281)||(30718746-30718798)
chr6 (282-333)||(10733488-10733539)
chr6 (282-333)||(21043831-21043882)
chr6 (287-333)||(27577839-27577885)
chr6 (464-497)||(25183982-25184015)
[»] scaffold0012 (1 HSPs)
scaffold0012 (282-383)||(165738-165838)
[»] scaffold0166 (3 HSPs)
scaffold0166 (229-359)||(34637-34777)
scaffold0166 (323-377)||(34575-34629)
scaffold0166 (231-281)||(34494-34544)
[»] scaffold0785 (2 HSPs)
scaffold0785 (319-372)||(2983-3035)
scaffold0785 (282-333)||(3170-3221)
[»] scaffold0003 (1 HSPs)
scaffold0003 (282-330)||(43726-43774)
[»] scaffold0029 (1 HSPs)
scaffold0029 (244-328)||(76860-76954)


Alignment Details
Target: chr8 (Bit Score: 700; Significance: 0; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 700; E-Value: 0
Query Start/End: Original strand, 17 - 826
Target Start/End: Original strand, 20232177 - 20232992
Alignment:
Q  17 ttcaatggaatatagaggagtggattggtggatagttatttttggagtttggtgaaaagatgaataagagtgaaaattcatcatttcaaaccacttccac 116  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20232177 ttcaatggaatatagaggagtggattggtggaaagttatttttggagtttggtgaaaagatgaataagagtgaaaattcatcatttcaaaccacttccac 20232276  T
Q  117 tagccttgttcttcctttgtttaatgaaagaaagaactaatccttagttcctaagcaaatgcaaagttgcattttacgcttgattatttttgttaatggc 216  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20232277 tagccctgttcttcctttgtttaatgaaagaaagaactaatccttagttcctaagcaaatgcaaagttgcattttacgcttgattatttttgttaatggc 20232376  T
Q  217 -----atgcttaataagtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgactctttataaactcttctcaagaatcccat 311  Q
         ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  20232377 ttcaaatgcttaataagtgtaatgaatatcgaggcctaactcatctatacaaaaccggcttgtacggtgactctttataaactcttctcaagaatctcat 20232476  T
Q  312 ctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccccctgaagcgtggacgatgcaagcccgac 411  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20232477 ctatccgatgtgggactaaatcccacccgagtgttggccgctaacacacaccctcacgcttcagcccagccccctgaagcgtggacgatgcaagcccgac 20232576  T
Q  412 ttgtacggttaggagtgcctcttttttataaactcttattcattaatcataaggactaaatcccacctgagtgttggctgctaacaataagctcgtctgg 511  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  20232577 ttgtacggttaggagtgcctcccttttataaactcttattcattaatcataaggactaaatcccacccgagtgttagccactaacaataagctcgtctgg 20232676  T
Q  512 gacgtgtaattatttacagtatttatttgattttacttcattttttgatggtctcagaatcaaagttcaatatatctgaactggctttttctttatatca 611  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20232677 gatgtgtaattatttacagtatttatttgattttacttcattttttgatggtctcagaatcaaagttcaatatatctgaactagctttttctttatatca 20232776  T
Q  612 ggtaaaagacgtagtagtggaagttgtggaaggagatgctagaaatgttctctgtgatgctgtggagaagcaccatgcttcgattttggtcgtaggtagt 711  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||    
T  20232777 ggtaaaagacgtagtagtggaagttgtggatggagatgctagaaatgttctctgtgatgctgtggacaagcaccatgcttctattttggttgtaggtagt 20232876  T
Q  712 catggttatggagctataaaaaggtatgtgttcattcagatcccaattatcatgctattgcattgcgataatagctttaaaggagtctgat-aatactta 810  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20232877 catggttacggagctataaaaaggtatgtgttcattcagatcccaattatcatgctattgcattgcgataatagctttaaaggagtctgataaatactta 20232976  T
Q  811 tcctcgtactttctag 826  Q
    | || |||||||||||    
T  20232977 tactggtactttctag 20232992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 229 - 376
Target Start/End: Original strand, 17607201 - 17607356
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  |||||||| || |||||||||||          ||||||||||||||||| ||||||||| ||||||||     
T  17607201 tgtaacgaatatcgaggcctaactcatccttacaaaactggcttgtacggtgagtagtgcctcctctttataaactcttcacaagaatcctatctatccg 17607300  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagc 376  Q
    ||||| ||||||||| ||| |||||||||||||||||||||| |||||||||||||||    
T  17607301 atgtgagactaaatc-cactcgagtgttggccgctaacacac-ccctcacgcttcagc 17607356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 282 - 378
Target Start/End: Original strand, 38287787 - 38287882
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagccc 378  Q
    |||||||||||||||| |||||||||| |||||||| ||||||||||||||| || ||||||||||||| ||||||||| |||||||||||||||||    
T  38287787 ctctttataaactcttatcaagaatcctatctatccgatgtgggactaaatccca-ccgagtgttggcccctaacacaccccctcacgcttcagccc 38287882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 35908795 - 35908658
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          |||||||||||||||||||||| |||| ||||| ||     
T  35908795 tgtaacgaatatcgaggcctaactcatccttacaaaaccggcttgtacggtgaggagtgccttctctttataaactcttctcaagtatcctatctacccg 35908696  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  35908695 atgtgggactaaatccca-ccgagtgttggccgctaaca 35908658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 18464124 - 18464049
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||||||||| |||||||||||||||||||||||    
T  18464124 ctctttataaactcttctcaagaatcctatctatctgatgtgggactaaatcccacccgagtgttggccgctaaca 18464049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 282 - 383
Target Start/End: Complemental strand, 8605544 - 8605444
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagc 381  Q
    |||| |||||||||||||||||||||| || ||||| | ||| |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||| ||    
T  8605544 ctctatataaactcttctcaagaatcctatttatccgacgtgagactaaatgtcacc-gagtgttggccgctaacacaccccctcacgcttcagcccggc 8605446  T
Q  382 cc 383  Q
    ||    
T  8605445 cc 8605444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 230 - 359
Target Start/End: Complemental strand, 15711612 - 15711474
Alignment:
Q  230 gtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaa 319  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||          ||||||||||||||||||||||||||| |||||||| |    
T  15711612 gtaatgaatatcgaggcctaactcatccctataaaacaggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccga 15711513  T
Q  320 tgtgggactaaatctcacccgagtgttggccgctaacaca 359  Q
    |||||||||||||| || |||||||||||| |||||||||    
T  15711512 tgtgggactaaatccca-ccgagtgttggctgctaacaca 15711474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 14019862 - 14019787
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  14019862 ctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatcccacccgagtgttggctgctaaca 14019787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 282 - 374
Target Start/End: Original strand, 9596043 - 9596134
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttca 374  Q
    ||||||||||| | ||||||||||||| |||||||| |||||| |||||||| || |||||||||||||||||||||||  ||||| ||||||    
T  9596043 ctctttataaaatattctcaagaatcctatctatccgatgtggaactaaatccca-ccgagtgttggccgctaacacacctcctcatgcttca 9596134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 8276603 - 8276552
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8276603 ctctttataaactcttctcaagaatcctatctatccaatgtgggactaaatc 8276552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 282 - 377
Target Start/End: Original strand, 39587908 - 39588001
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcc 377  Q
    ||||||||||||||||||| ||||||| ||| |||  ||||||||||||||| || | |||||||||| |||||||||| ||||||||||||||||    
T  39587908 ctctttataaactcttctctagaatcctatccatctgatgtgggactaaatc-ca-ctgagtgttggctgctaacacaccccctcacgcttcagcc 39588001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 357
Target Start/End: Original strand, 38287957 - 38288088
Alignment:
Q  235 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgg 324  Q
    |||||||||| |||||||||||  ||||||||| | |||||||||||          ||||||||||||||||||||| ||||| ||||||  || |||     
T  38287957 gaatatcgagacctaactcatccttacaaaaccagcttgtacggtgagtagtgtctcctctttataaactcttctcaaaaatcctatctatttaacgtgt 38288056  T
Q  325 gactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||| |||||||||||| |||||||    
T  38288057 gactaaatctca-ccgagtgttggctgctaaca 38288088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 9596269 - 9596343
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||||||||||||||  |||||||| || || ||||||||| || ||||||||||||| ||||||    
T  9596269 ctctttataaactcttctcaagaatcttatctatccgatatgagactaaatccca-ccgagtgttggccactaaca 9596343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 18905910 - 18905859
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  18905910 ctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 18905859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 20298566 - 20298617
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||||||   ||||||| ||||||||||||||||    
T  20298566 ctctttataaactcttctcaagaataatatctatcaaatgtgggactaaatc 20298617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 21085198 - 21085249
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  21085198 ctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 21085249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 32931455 - 32931404
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||||||   |||||||| |||||||||||||||    
T  32931455 ctctttataaactcttctcaagaatgatatctatccgatgtgggactaaatc 32931404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 34248413 - 34248362
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||| |||||| ||| ||||| ||||||||||||||||||    
T  34248413 ctctttataaactcttatcaagagtcctatctaaccaatgtgggactaaatc 34248362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 35561720 - 35561674
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||    
T  35561720 ctctttataaactcttctcaagaatcttatctatccgatgtgggact 35561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 14582284 - 14582233
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||| |||  || |||| ||||||||||||||||    
T  14582284 ctctttataaactcttctcaagtatcatatttatcaaatgtgggactaaatc 14582233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 23027555 - 23027606
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||  |||||||||||||||    
T  23027555 ctctttataaactcttctcaagagttctatctatctgatgtgggactaaatc 23027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 23027878 - 23027929
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||| |||||||||||| | | |||||||| |||||||||||||||    
T  23027878 ctctttataagctcttctcaagagttctatctatcctatgtgggactaaatc 23027929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 34248131 - 34248080
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||| |||||| ||| ||||| || |||||||||||||||    
T  34248131 ctctttataaactcttatcaagagtcctatctaaccgatgtgggactaaatc 34248080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 5720917 - 5720963
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  5720917 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 5720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 14019820 - 14019786
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaacaa 498  Q
    ||||||||||||||| |||||||||||||||||||    
T  14019820 ggactaaatcccacccgagtgttggctgctaacaa 14019786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 43599365 - 43599319
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  43599365 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 43599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 700; Significance: 0; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 700; E-Value: 0
Query Start/End: Original strand, 17 - 826
Target Start/End: Original strand, 44314084 - 44314899
Alignment:
Q  17 ttcaatggaatatagaggagtggattggtggatagttatttttggagtttggtgaaaagatgaataagagtgaaaattcatcatttcaaaccacttccac 116  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44314084 ttcaatggaatatagaggagtggattggtggaaagttatttttggagtttggtgaaaagatgaataagagtgaaaattcatcatttcaaaccacttccac 44314183  T
Q  117 tagccttgttcttcctttgtttaatgaaagaaagaactaatccttagttcctaagcaaatgcaaagttgcattttacgcttgattatttttgttaatggc 216  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44314184 tagccctgttcttcctttgtttaatgaaagaaagaactaatccttagttcctaagcaaatgcaaagttgcattttacgcttgattatttttgttaatggc 44314283  T
Q  217 -----atgcttaataagtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgactctttataaactcttctcaagaatcccat 311  Q
         ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  44314284 ttcaaatgcttaataagtgtaatgaatatcgaggcctaactcatctatacaaaaccggcttgtacggtgactctttataaactcttctcaagaatctcat 44314383  T
Q  312 ctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccccctgaagcgtggacgatgcaagcccgac 411  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44314384 ctatccgatgtgggactaaatcccacccgagtgttggccgctaacacacaccctcacgcttcagcccagccccctgaagcgtggacgatgcaagcccgac 44314483  T
Q  412 ttgtacggttaggagtgcctcttttttataaactcttattcattaatcataaggactaaatcccacctgagtgttggctgctaacaataagctcgtctgg 511  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  44314484 ttgtacggttaggagtgcctcccttttataaactcttattcattaatcataaggactaaatcccacccgagtgttagccactaacaataagctcgtctgg 44314583  T
Q  512 gacgtgtaattatttacagtatttatttgattttacttcattttttgatggtctcagaatcaaagttcaatatatctgaactggctttttctttatatca 611  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44314584 gatgtgtaattatttacagtatttatttgattttacttcattttttgatggtctcagaatcaaagttcaatatatctgaactagctttttctttatatca 44314683  T
Q  612 ggtaaaagacgtagtagtggaagttgtggaaggagatgctagaaatgttctctgtgatgctgtggagaagcaccatgcttcgattttggtcgtaggtagt 711  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||    
T  44314684 ggtaaaagacgtagtagtggaagttgtggatggagatgctagaaatgttctctgtgatgctgtggacaagcaccatgcttctattttggttgtaggtagt 44314783  T
Q  712 catggttatggagctataaaaaggtatgtgttcattcagatcccaattatcatgctattgcattgcgataatagctttaaaggagtctgat-aatactta 810  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44314784 catggttacggagctataaaaaggtatgtgttcattcagatcccaattatcatgctattgcattgcgataatagctttaaaggagtctgataaatactta 44314883  T
Q  811 tcctcgtactttctag 826  Q
    | || |||||||||||    
T  44314884 tactggtactttctag 44314899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 229 - 378
Target Start/End: Original strand, 47346081 - 47346240
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||| ||| |||||||      
T  47346081 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatctg 47346180  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagccc 378  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  47346181 atgtgggactaaatcccacccgagagttggccgctaacacaccccctcacgcttcagccc 47346240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 36270457 - 36270645
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  |||||| |||| |||||||||||          |||||||||||||| |||||||||||| ||||||||     
T  36270457 tgtaacgaatatcgaggcctaactcatccttacaaagccggcttgtacggtgaggagtgtctcctctttataaactcgtctcaagaatcctatctatccg 36270556  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc------cctgaagcgtggacgatgc 402  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||| ||||      |||||||||||||||||||    
T  36270557 atgtgggactaaatccca-ccgagtgttgaccgctaacacacaccctcacgcttcagcccggcccaatgggcctgaagcgtggacgatgc 36270645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 235 - 383
Target Start/End: Original strand, 37755932 - 37756089
Alignment:
Q  235 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgg 324  Q
    |||||| ||||||||||||||| ||| |||||||| |||||||||||          ||||||||||||||||||||||| ||| |||||||| ||||||    
T  37755932 gaatattgaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgg 37756030  T
Q  325 gactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  37756031 gactaaatcccacccgagagttggccgctaacacaccccctcacgcttcagcccggccc 37756089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 229 - 408
Target Start/End: Complemental strand, 36496006 - 36495813
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||||||||| |||||||||||||||  ||||||||||| |||||||||||          ||||||||||||| ||||||||||||| ||||||||     
T  36496006 tgtaacgaatatagaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagaatcctatctatccg 36495907  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc------cctgaagcgtggacgatgcaagccc 408  Q
    ||||||||||||||| |||||||| |||||||||||||  |||||| ||||||||||||  ||||      |||||||| ||||||||||||||||    
T  36495906 atgtgggactaaatcccacccgagagttggccgctaac--acacccccacgcttcagcctggcccaatgggcctgaagcatggacgatgcaagccc 36495813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 233 - 357
Target Start/End: Complemental strand, 34748891 - 34748757
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    ||||||||||||| ||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||||||| |||||||| ||||    
T  34748891 acgaatatcgaggtctaactcatccttacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagaatcctatctatccgatgt 34748792  T
Q  323 gggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||| |||||||||||||||||||||||    
T  34748791 gggactaaatcccacccgagtgttggccgctaaca 34748757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 229 - 359
Target Start/End: Complemental strand, 33909254 - 33909114
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||| |||||||||||||||||||||| |||||||||||| |||||| ||||          ||||||||||||||||||||||||||| ||||||||     
T  33909254 tgtaaagaatatcgaggcctaactcatccatacaaaaccggcttgtacagtgaggagtgtatcctctttataaactcttctcaagaatcctatctatccg 33909155  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacaca 359  Q
    ||||||||||||||| |||||||| |||||||| |||||||    
T  33909154 atgtgggactaaatcccacccgagagttggccgttaacaca 33909114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 47346310 - 47346448
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||| ||| |||| |||     
T  47346310 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctttccg 47346409  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  47346410 atgtgggactaaatcccacccgagagttggccgctaaca 47346448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 229 - 378
Target Start/End: Original strand, 24240181 - 24240324
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgactctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||| |||||        ||||||||||||||| ||| |||||||| ||||||||||    
T  24240181 tgtaatgaatatcgaggcctaactcatcagtacaaaaccggcttgtatggtgagg------aaactcttctcaagattcctatctatccgatgtgggact 24240274  T
Q  329 aaatctcacccgagtgttggccgctaacacacaccctcacgcttcagccc 378  Q
    ||||| |||| ||| |||||| |||||||||| |||||||||||||||||    
T  24240275 aaatcccacctgagagttggctgctaacacaccccctcacgcttcagccc 24240324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 27585373 - 27585235
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||||||||||||| |||||||||||  ||||||||||| |||||||||||          || |||||||||||||||||||||||| ||||||||     
T  27585373 tgtaacgaatatcgagacctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctttttataaactcttctcaagaatcctatctatccg 27585274  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| |||| |||||||||| |||||||    
T  27585273 atgtgggactaaatcccacctgagtgttggctgctaaca 27585235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 36270684 - 36270822
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||| |||||||||||||||||||||  ||||||||||| |||||| ||||          |||||||||||||| | |||||||||| |||||||||    
T  36270684 tgtaacaaatatcgaggcctaactcatccttacaaaaccggcttgtacagtgaggagtgcctcctctttataaactcctgtcaagaatcctatctatcca 36270783  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  36270784 atgtgggacaaaatcccacccgagtgttggccgctaaca 36270822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 235 - 357
Target Start/End: Original strand, 37756158 - 37756289
Alignment:
Q  235 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgg 324  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||          ||||||||||||||||||||||| ||| |||||||| ||||||    
T  37756158 gaatatcgaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgg 37756256  T
Q  325 gactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||| |||||||| ||||||||||||||    
T  37756257 gactaaatcccacccgagagttggccgctaaca 37756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 232 - 357
Target Start/End: Complemental strand, 36495780 - 36495645
Alignment:
Q  232 aacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatg 321  Q
    |||||||||||||||||||||||||  ||||||||||| || ||||||||          ||||||||||||| ||||||||||||| |||||||| |||    
T  36495780 aacgaatatcgaggcctaactcatccctacaaaaccggcttctacggtgaggagtgcctcctctttataaactattctcaagaatcctatctatccgatg 36495681  T
Q  322 tgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||  |||||||| ||||||||||||||    
T  36495680 tgggactaaatgccacccgagagttggccgctaaca 36495645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 34914907 - 34915045
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgac----------tctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||           ||||| ||||||||||||||||||||  |||||||     
T  34914907 tgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcatctttgtaaactcttctcaagaatcctgtctatccg 34915006  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| |||||||||| |||| |||||||    
T  34915007 atgtgggactaaatcccacccgagtgctggctgctaaca 34915045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 235 - 357
Target Start/End: Original strand, 37761906 - 37762037
Alignment:
Q  235 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgg 324  Q
    |||||| ||||||||||||||| ||| |||||||| |||||||||||          ||||||||||||||||||||||| ||| |||||||| ||||||    
T  37761906 gaatattgaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgg 37762004  T
Q  325 gactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||| |||||||| ||||||||||||||    
T  37762005 gactaaatcccacccgagagttggccgctaaca 37762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 282 - 359
Target Start/End: Original strand, 39550028 - 39550104
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacaca 359  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  39550028 ctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatccca-ccgagtgttggccgctaacaca 39550104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 24240393 - 24240515
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgactctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||| ||| ||||||||||||||  ||||||||||| |||||||||||        |||||||||| |||| ||| |||||||| ||||||||||    
T  24240393 tgtaacgaacatcaaggcctaactcatccgtacaaaaccggcttgtacggtgagg------aaactcttcttaagattcctatctatccgatgtgggact 24240486  T
Q  329 aaatctcacccgagtgttggccgctaaca 357  Q
    ||||| |||||||| ||||||||||||||    
T  24240487 aaatcccacccgagagttggccgctaaca 24240515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 282 - 378
Target Start/End: Complemental strand, 19843761 - 19843666
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagccc 378  Q
    ||||||||||||||||||||||||||| |||||||  || |||||||||||| |   |||||||||||||||||||||| | |||||||||||||||    
T  19843761 ctctttataaactcttctcaagaatcctatctatctgatttgggactaaatc-ccttcgagtgttggccgctaacacactcgctcacgcttcagccc 19843666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 20296317 - 20296243
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||| | | |||||||||||||||||||    
T  20296317 ctctttataaactcttctcaagaatcctctctatccaatgtgggactaaatc-ccctcgagtgttggccgctaaca 20296243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 282 - 370
Target Start/End: Original strand, 36092442 - 36092528
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgc 370  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||| || | |||||||||  |||||||||| |||||||||    
T  36092442 ctctctataaactcttctcaagaatcatatctatccaatgtgggactaaatc-ca-ctgagtgttggttgctaacacaccccctcacgc 36092528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 43384330 - 43384381
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  43384330 ctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 43384381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 37530973 - 37531050
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcaccc---gagtgttggccgctaaca 357  Q
    ||||||||||||||||||||||||||| |||||||| | ||||||||||||| |||||   |||||||||| |||||||    
T  37530973 ctctttataaactcttctcaagaatcctatctatccgacgtgggactaaatc-cacccagtgagtgttggctgctaaca 37531050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 22206328 - 22206402
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||| ||||||||||||| |||||| | ||||||||||||||| || ||||||| | ||||||||||    
T  22206328 ctctttataaacttttctcaagaatcctatctattcgatgtgggactaaatccca-ccgagtgattgccgctaaca 22206402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 22228411 - 22228337
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||| ||||||||||||| |||||| | ||||||||||||||| || ||||||| | ||||||||||    
T  22228411 ctctttataaacttttctcaagaatcctatctattcgatgtgggactaaatccca-ccgagtgattgccgctaaca 22228337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 36092649 - 36092722
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||| |||||||||||||||||||||| |||||||| ||||||||||||||  || |||||||||||| |||||||    
T  36092649 ctctctataaactcttctcaagaatcctatctatccgatgtgggactaaat-aca-ccgagtgttggcggctaaca 36092722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 22686783 - 22686860
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacac 360  Q
    |||||||||||||||| |||||||||| || ||||| |||||||| |||||| | | ||||||||| ||||||||||||    
T  22686783 ctctttataaactcttttcaagaatcctatttatccgatgtgggattaaatc-ccctcgagtgttgaccgctaacacac 22686860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 244 - 333
Target Start/End: Original strand, 7135245 - 7135344
Alignment:
Q  244 ggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||| ||||||||||| ||||| |||||          ||||||||||||||||||||||| ||| |||||||| ||||| |||||||||    
T  7135245 ggcctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgtgactaaatc 7135344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 257317 - 257368
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||||||   |||||||| |||||||||||||||    
T  257317 ctctttataaactcttctcaagaataatatctatccgatgtgggactaaatc 257368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 464 - 499
Target Start/End: Complemental strand, 27585268 - 27585233
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaacaat 499  Q
    ||||||||||||||||||||||||||||||||||||    
T  27585268 ggactaaatcccacctgagtgttggctgctaacaat 27585233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 40121989 - 40122038
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaa 331  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||    
T  40121989 ctctttataaactcttctcaagagtactatctatccgatgtgggactaaa 40122038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 1663658 - 1663706
Alignment:
Q  285 tttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||| | | |||||||| |||||||||||||||    
T  1663658 tttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 1663706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 282 - 377
Target Start/End: Original strand, 43383996 - 43384085
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcc 377  Q
    ||||||||||||||||  ||||| ||| |||||||| |||||||||||||       ||||||||||| | |||||| | ||||||||||||||||    
T  43383996 ctctttataaactctttgcaagactcctatctatccgatgtgggactaaa------acgagtgttggctgttaacaccccccctcacgcttcagcc 43384085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 1661241 - 1661292
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| |   |||||||| |||||||||||||||    
T  1661241 ctctttataaactcttctcaagagttttatctatccgatgtgggactaaatc 1661292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 19843530 - 19843464
Alignment:
Q  290 aaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||| ||||| |||||||| || ||||||| |||| | | |||||||||||||||||||    
T  19843530 aaactcttctcaataatcctatctatccgatttgggacttaatc-ccctcgagtgttggccgctaaca 19843464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 353
Target Start/End: Original strand, 27729460 - 27729598
Alignment:
Q  228 gtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatc----ccatct 313  Q
    |||| |||||||||||| |||||||||||  ||||||| ||| |||||||||||           |||||||||||||||| ||| ||||    | ||||    
T  27729460 gtgtcacgaatatcgagacctaactcatccttacaaaatcggcttgtacggtgaggattgcatcatctttataaactcttcccaataatcctatctatct 27729559  T
Q  314 atccaatgtgggactaaatctcacccgagtgttggccgct 353  Q
    |||| ||||||||||||||| || ||||||||||||||||    
T  27729560 atccgatgtgggactaaatccca-ccgagtgttggccgct 27729598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 28910086 - 28910035
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||| ||||| ||| |||||||  |||||||||||||||    
T  28910086 ctctttataaactcttcccaagagtcctatctatcttatgtgggactaaatc 28910035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 37272095 - 37272146
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||| |||||| ||| ||||| || |||||||||||||||    
T  37272095 ctctttataaactcttatcaagagtcctatctaaccgatgtgggactaaatc 37272146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 41670637 - 41670586
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||| | |||||||||||||||    
T  41670637 ctctttataaactcttctcaagagtactatctattcgatgtgggactaaatc 41670586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 43167943 - 43167994
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| || ||||||||||||    
T  43167943 ctctttataaactcttctcaagagtgctatctatccgatttgggactaaatc 43167994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 6813128 - 6813174
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    |||||||||||||||  |||||| |||||||||||| ||||||||||    
T  6813128 ctctttataaactctcatcaagagtcccatctatccgatgtgggact 6813174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 14991559 - 14991593
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatc 316  Q
    ||||||||||||||||||||||||||| |||||||    
T  14991559 ctctttataaactcttctcaagaatcctatctatc 14991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 15421170 - 15421204
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatc 316  Q
    ||||||||||||||||||||||||||| |||||||    
T  15421170 ctctttataaactcttctcaagaatcctatctatc 15421204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 33909417 - 33909371
Alignment:
Q  235 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga 281  Q
    |||||| ||||||||||||||| |||||||||||| |||||| ||||    
T  33909417 gaatattgaggcctaactcatccatacaaaaccggcttgtacagtga 33909371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 36237856 - 36237810
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||    
T  36237856 ctctttataaactcttatcaagagtcctatgtatccaatgtgggact 36237810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 497
Target Start/End: Original strand, 24240270 - 24240303
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaaca 497  Q
    ||||||||||||||||||| ||||||||||||||    
T  24240270 ggactaaatcccacctgagagttggctgctaaca 24240303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 27585332 - 27585295
Alignment:
Q  411 cttgtacggttaggagtgcctcttttttataaactctt 448  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  27585332 cttgtacggtgaggagtgcctcctttttataaactctt 27585295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 8e-48; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 17295095 - 17294931
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||||||| ||||||||     
T  17295095 tgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccg 17294996  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  17294995 atgtgggactaaatcccacccgagtgttggccgctaacacaccccctcacgctttagcccagccc 17294931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 29228792 - 29228628
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  |||||| |||| |||||| ||||          ||||||||||||||||||||||| ||| ||||||||     
T  29228792 tgtaacgaatatcgaggcctaactcatccctacaaatccggcttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatctatccg 29228693  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  29228692 atgtgggactaaatcccacccgagagttggccgctaacacaccccctcacgcttcagcccggccc 29228628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 29228565 - 29228427
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||| ||| ||||||||     
T  29228565 tgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatccg 29228466  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||| ||||||| |||||||| ||||||||||||||    
T  29228465 atgtgggtctaaatcccacccgagagttggccgctaaca 29228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 282 - 378
Target Start/End: Original strand, 30604510 - 30604606
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagccc 378  Q
    ||||||||||||| ||||||||| ||| |||||||| ||||||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||    
T  30604510 ctctttataaactattctcaagattcctatctatccgatgtgggactaaatcccacccgagagttgaccgctaacacaccccctcacgcttcagccc 30604606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 300 - 383
Target Start/End: Complemental strand, 17294903 - 17294820
Alignment:
Q  300 caagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  17294903 caagaatcctatctatccgatgtgggactaaatcccacccgagtgttggccgctaacacaccccctcacgctttagcccagccc 17294820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 286 - 378
Target Start/End: Original strand, 4187336 - 4187428
Alignment:
Q  286 ttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagccc 378  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||||| ||| |||| ||||||||||||||||| ||||||| |||||||||    
T  4187336 ttataaactcttctcaagattcctatctatccgatgtgggactaaatcccactcgagagttggccgctaacacaccccctcacacttcagccc 4187428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 233 - 357
Target Start/End: Original strand, 4187505 - 4187638
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga-------ctctt--tataaactcttctcaagaatcccatctatccaatgtg 323  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||||||       ||| |  |||||||||||||||||| ||| |||||||| |||||    
T  4187505 acgaatatcgaggcgtaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctcttataaactcttctcaagattcctatctatccgatgtg 4187604  T
Q  324 ggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||| |||||||| ||||||||||||||    
T  4187605 ggactaaatcccacccgagagttggccgctaaca 4187638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 239 - 359
Target Start/End: Complemental strand, 51722361 - 51722230
Alignment:
Q  239 atcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctct-ttataaactcttctcaagaatcccatctatccaatgtgggac 327  Q
    ||||||||||||||||||  ||||||||||| |||||||||||          |||| ||||||||||||||||||||||| |||||||| |||||||||    
T  51722361 atcgaggcctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctctcttataaactcttctcaagaatcctatctatccgatgtgggac 51722262  T
Q  328 taaatctcacccgagtgttggccgctaacaca 359  Q
    |||||| ||||||||||||||| |||||||||    
T  51722261 taaatcccacccgagtgttggctgctaacaca 51722230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 33562114 - 33562252
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||| ||||||||||||||   |||||||||| |||||||||||          |||||||||| ||||| |||||||||| ||||||||     
T  33562114 tgtaacgaatatcaaggcctaactcatccccacaaaaccggcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatctatccg 33562213  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  33562214 atgtgggactaaaacccacccgagtgttggccgctaaca 33562252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 609 - 739
Target Start/End: Complemental strand, 39637581 - 39637451
Alignment:
Q  609 tcaggtaaaagacgtagtagtggaagttgtggaaggagatgctagaaatgttctctgtgatgctgtggagaagcaccatgcttcgattttggtcgtaggt 708  Q
    ||||||||| || ||| |||| || || |||||||| |||||||||||||||||||||||| | ||||| ||| ||| |||||| || ||||| || |||    
T  39637581 tcaggtaaatgatgtaatagtagaggtggtggaaggtgatgctagaaatgttctctgtgatacagtggaaaagtaccgtgcttcaatcttggttgtgggt 39637482  T
Q  709 agtcatggttatggagctataaaaaggtatg 739  Q
    ||||| |||||||| ||||||||||||||||    
T  39637481 agtcacggttatggggctataaaaaggtatg 39637451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 609 - 739
Target Start/End: Complemental strand, 39646249 - 39646119
Alignment:
Q  609 tcaggtaaaagacgtagtagtggaagttgtggaaggagatgctagaaatgttctctgtgatgctgtggagaagcaccatgcttcgattttggtcgtaggt 708  Q
    ||||||||| || ||| |||| || || |||||||| |||||||||||||||||||||||| | ||||| ||| ||| |||||| || ||||| || |||    
T  39646249 tcaggtaaatgatgtaatagtagaggtggtggaaggtgatgctagaaatgttctctgtgatacagtggaaaagtaccgtgcttcaatcttggttgtgggt 39646150  T
Q  709 agtcatggttatggagctataaaaaggtatg 739  Q
    ||||| |||||||| ||||||||||||||||    
T  39646149 agtcacggttatggggctataaaaaggtatg 39646119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 299 - 379
Target Start/End: Original strand, 31411425 - 31411505
Alignment:
Q  299 tcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagccca 379  Q
    |||||||||| |||||||| ||||| ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||    
T  31411425 tcaagaatcctatctatccgatgtgagactaaatcccacccgagtgttggtcgctaacacaccccctcacgcttcagccca 31411505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 12287965 - 12287828
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  ||||||||| | |||||||||||          |||||||||| ||||| |||||||||| ||||||||     
T  12287965 tgtaacgaatatcgaggcctaactcatccttacaaaaccagcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatctatccg 12287866  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| || ||||||||||||| ||||||    
T  12287865 atgtgggactaaatccca-ccgagtgttggccactaaca 12287828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 31411543 - 31411685
Alignment:
Q  229 tgtaacgaatatcgaggcctaact----catctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatcta 314  Q
    ||||||||||||||||||||||||    |||| |||||||||||| |||||||||||          || ||||||||||||| |||||||||| |||||    
T  31411543 tgtaacgaatatcgaggcctaacttatccatccatacaaaaccggcttgtacggtgagatgtgcctcctttttataaactcttttcaagaatcctatcta 31411642  T
Q  315 tccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||  ||||||||||||||| |||||||||||||||| ||||||    
T  31411643 tctgatgtgggactaaatcccacccgagtgttggccactaaca 31411685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 45443273 - 45443200
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||    
T  45443273 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatccca-ccgagtgttggccgctaaca 45443200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 45858772 - 45858635
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||||||||| |||||||||||||||  || |||||||  |||||||||||          ||||||||||||||||||||||||||| ||||||||     
T  45858772 tgtaacgaatattgaggcctaactcatccttataaaaccgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccg 45858673  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| | |  ||||||||||||||||||    
T  45858672 atgtgggactaaatc-cccatgagtgttggccgctaaca 45858635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 29383675 - 29383747
Alignment:
Q  284 ctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||||||||||| |||  |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  29383675 ctttataaactcttctcaagtatcttatctatccgatgtgggactaaatc-cacccgagtgttggccgctaaca 29383747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 40521543 - 40521618
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacac 358  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||||| | | ||||||||||||||||||||    
T  40521543 ctctttataaactcttctcaagaatcttatctatccgatgtgggactaaatcac-ctcgagtgttggccgctaacac 40521618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 408
Target Start/End: Complemental strand, 45858916 - 45858802
Alignment:
Q  299 tcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc------cctgaagcg 392  Q
    |||||||||| |||||||| ||||| ||||||||| | | |||||||||||||||||||||| | ||||||||||||||| ||||      |||||| ||    
T  45858916 tcaagaatcctatctatccgatgtgagactaaatccc-ctcgagtgttggccgctaacacaccctctcacgcttcagcccggcccaatgggcctgaaacg 45858818  T
Q  393 tggacgatgcaagccc 408  Q
    ||||||||||||||||    
T  45858817 tggacgatgcaagccc 45858802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 18585092 - 18585018
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||||||| || |||||||||||| |||||||    
T  18585092 ctctttataaaatcttctcaagaatcctatctatccgatgtgggactaaatccca-ccgagtgttggctgctaaca 18585018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 40642826 - 40642903
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcaccc---gagtgttggccgctaaca 357  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||   |||||||||| |||||||    
T  40642826 ctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc-cacccattgagtgttggctgctaaca 40642903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 28509437 - 28509488
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  28509437 ctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 28509488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 27958097 - 27958170
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaac 356  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |  |||||||||||| ||||||    
T  27958097 ctctttataaactcttctcaagaatcctatctatctaatgcgggactaaatc-cctccgagtgttggctgctaac 27958170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 375
Target Start/End: Original strand, 27957859 - 27957950
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcag 375  Q
    ||||||||||||| |||||||||||||||||||||  ||| ||||||||||| |  || |||||||||| |||| |||| ||||||||||||||    
T  27957859 ctctttataaacttttctcaagaatcccatctatcagatgcgggactaaatc-cctccaagtgttggccactaa-acaccccctcacgcttcag 27957950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 2697381 - 2697432
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  2697381 ctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 2697432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 4022175 - 4022226
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  4022175 ctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 4022226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 19937093 - 19937144
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||||||||    
T  19937093 ctctttataaactcttctcaagaattctatctatccgatgtgggactaaatc 19937144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 17419841 - 17419790
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  17419841 ctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 17419790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 38474337 - 38474286
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||| |||||||||| |||||||| |||| ||||||||||    
T  38474337 ctctttataaactcttgtcaagaatcctatctatccgatgtaggactaaatc 38474286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 8520144 - 8520194
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  8520144 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 8520194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 31305765 - 31305714
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||  |||||||||||||||    
T  31305765 ctctttataaactcttctcaagagtgctatctatcggatgtgggactaaatc 31305714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 37600926 - 37600875
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| |   |||||||||||| |||||||||||    
T  37600926 ctctttataaactcttctcaagagtgttatctatccaatgagggactaaatc 37600875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 20208137 - 20208183
Alignment:
Q  287 tataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||| |||||||||  |||||||| |||||||||||||||    
T  20208137 tataaactcttttcaagaatcatatctatccgatgtgggactaaatc 20208183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 20208436 - 20208482
Alignment:
Q  287 tataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||| |||||||||  |||||||| |||||||||||||||    
T  20208436 tataaactcttttcaagaatcatatctatccgatgtgggactaaatc 20208482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 39649134 - 39649180
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  39649134 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 39649180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 45443296 - 45443259
Alignment:
Q  411 cttgtacggttaggagtgcctcttttttataaactctt 448  Q
    |||||||||||||||||||||| | |||||||||||||    
T  45443296 cttgtacggttaggagtgcctcatctttataaactctt 45443259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 45858735 - 45858694
Alignment:
Q  407 ccgacttgtacggttaggagtgcctcttttttataaactctt 448  Q
    |||||||||||||| ||||||||||| | |||||||||||||    
T  45858735 ccgacttgtacggtgaggagtgcctcctctttataaactctt 45858694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 497
Target Start/End: Complemental strand, 51722265 - 51722232
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaaca 497  Q
    ||||||||||||||| ||||||||||||||||||    
T  51722265 ggactaaatcccacccgagtgttggctgctaaca 51722232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 7e-42; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 233 - 383
Target Start/End: Original strand, 83802 - 83961
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga---------ctctttataaactcttctcaagaatcccatctatccaatgtg 323  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||||||         ||||||||||||| ||||||||||||| || ||||| |||||    
T  83802 acgaatatcgagacctaactcatccatacaaaaccggcttgtacggtgagagtgcctcctctttataaacttttctcaagaatcctatatatccgatgtg 83901  T
Q  324 ggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  83902 ggactaaatcccacccgagtgttggccgctaacaccccccctcacgcttcagcccagccc 83961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 5095888 - 5096021
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga-----ctctttataaactcttctcaagaatcccatctatccaatgtg 323  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||| |||||     |||||||||||||||||| || ||||| |||||||| |||||    
T  5095888 tgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtagggtgaggatcctctttataaactcttctaaaaaatcctatctatccgatgtg 5095987  T
Q  324 ggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||| |||||| ||||||||||||| |||||||||    
T  5095988 ggagtaaatcccacccgagtgttgaccgctaaca 5096021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 290 - 378
Target Start/End: Complemental strand, 33040331 - 33040243
Alignment:
Q  290 aaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagccc 378  Q
    ||||||||||||||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  33040331 aaactcttctcaagaatcctatctatccgatgtgggactaaatcccacgcgagtgttggccgctaacacaccccctcacgcttcagccc 33040243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 233 - 377
Target Start/End: Original strand, 22196317 - 22196470
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    ||||||||||||||||||||||||  ||||||||||| || ||||||||          ||||||||||||||||||||||| | | |||||||| ||||    
T  22196317 acgaatatcgaggcctaactcatccttacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgt 22196416  T
Q  323 gggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcc 377  Q
    ||||||||||| || |||||||||||||||||| |||| ||||||||||||||||    
T  22196417 gggactaaatccca-ccgagtgttggccgctaaaacaccccctcacgcttcagcc 22196470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 32395301 - 32395439
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||| ||||          ||||||||||||||||||||||| ||| ||||||||     
T  32395301 tgtaacgaatatcgaggcgtaactcatccatacaaaaccggcttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatctatccg 32395400  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  32395401 atgtgggactaaatcccacccgagagttggccgctaaca 32395439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 288 - 408
Target Start/End: Complemental strand, 33040518 - 33040392
Alignment:
Q  288 ataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagcc----- 382  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||| |||         
T  33040518 ataaactcttctcaagaatcctatctatctgatgtgggactaaatcccacgcgagtgttggccgctaacacacctcctcacgcttcagcccggccgaatg 33040419  T
Q  383 -ccctgaagcgtggacgatgcaagccc 408  Q
      |||||||||||||||||||||||||    
T  33040418 ggcctgaagcgtggacgatgcaagccc 33040392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 235 - 357
Target Start/End: Original strand, 84027 - 84159
Alignment:
Q  235 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgg 324  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||||          ||||||||||||||||||||||||||| || ||||| ||||||    
T  84027 gaatatcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatatatccgatgtgg 84126  T
Q  325 gactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||| |||||||||||||||| ||||||    
T  84127 gactaaatcccacccgagtgttggccactaaca 84159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 29396330 - 29396469
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          ||||||||||||| ||||||||| ||| |||||||      
T  29396330 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaacttttctcaagattcctatctatctg 29396429  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacac 358  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  29396430 atgtgggactaaatcccacccgagagttggccgctaacac 29396469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 233 - 357
Target Start/End: Complemental strand, 30329949 - 30329815
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    |||||||||||||||||||| ||| |||||||||||  |||||||||||          ||||||||||||||||||||||||||| |||||||| ||||    
T  30329949 acgaatatcgaggcctaactgatccatacaaaaccgacttgtacggtgaggagttcctcctctttataaactcttctcaagaatcctatctatccgatgt 30329850  T
Q  323 gggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||| | |||||| ||||||||||||||    
T  30329849 gggactaaatccctcccgagagttggccgctaaca 30329815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 2471680 - 2471817
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||| |||||||||| ||||||||||| |||||||||||| |||||||||||          ||||||||||||||||||||| || || ||||||||     
T  2471680 tgtaaggaatatcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaaaaaccctatctatccg 2471779  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| | | ||||||||||| |||||||    
T  2471780 atgtgggactaaatc-ccctcgagtgttggctgctaaca 2471817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 403
Target Start/End: Complemental strand, 18541991 - 18541878
Alignment:
Q  295 cttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc------cctga 388  Q
    |||||||||||||| |||||||| ||||| ||||||||| ||||  |||||||||||||||||| | ||||||||||||||||| ||||      |||||    
T  18541991 cttctcaagaatcctatctatccgatgtgagactaaatcccacca-agtgttggccgctaacaccccccctcacgcttcagcccggcccaatgggcctga 18541893  T
Q  389 agcgtggacgatgca 403  Q
    |||||||||||||||    
T  18541892 agcgtggacgatgca 18541878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 239 - 359
Target Start/End: Original strand, 22196550 - 22196679
Alignment:
Q  239 atcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    |||| |||||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  22196550 atcggggcctaactcatccttacaaaaccggcttgtacggtgatgagtgtctcctctttataaactcttctcaagagtcatatctatccgatgtgggact 22196649  T
Q  329 aaatctcacccgagtgttggccgctaacaca 359  Q
    ||||| || ||||||||||||||||||||||    
T  22196650 aaatccca-ccgagtgttggccgctaacaca 22196679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 14769883 - 14769956
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||| |||||||||||||||||||    
T  14769883 tctttataaactcttctcaagaatcctatctatccgatgtgagactaaatc-cactcgagtgttggccgctaaca 14769956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 229 - 359
Target Start/End: Original strand, 24792254 - 24792394
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga-------ctctt--tataaactcttctcaagaatcccatctatccaa 319  Q
    |||||||||||||||||||||| |||||   |||||||||| ||||| |||||       ||| |  |||||||||||||||||| ||| |||||||| |    
T  24792254 tgtaacgaatatcgaggcctaaatcatccccacaaaaccggtttgtaaggtgaggagtgcctcctcttataaactcttctcaagattcctatctatccga 24792353  T
Q  320 tgtgggactaaatctca-cccgagtgttggccgctaacaca 359  Q
    | ||||||||||||||| |||||| ||||||||||||||||    
T  24792354 tatgggactaaatctcaccccgagagttggccgctaacaca 24792394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 229 - 374
Target Start/End: Complemental strand, 30330180 - 30330024
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatcta--tacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatc 316  Q
    ||||||||||||||||||||||||||| |   | ||||||||| |||||||||||          ||||||||| ||||||||||||||||  ||||||     
T  30330180 tgtaacgaatatcgaggcctaactcatatccttgcaaaaccggcttgtacggtgaggagtgcctcctctttatatactcttctcaagaatcatatctatt 30330081  T
Q  317 caatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttca 374  Q
    ||||||||||||||||| | | | |||||||||| ||||||||| ||||||| |||||    
T  30330080 caatgtgggactaaatcgc-ctcaagtgttggcctctaacacaccccctcacacttca 30330024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 319 - 408
Target Start/End: Complemental strand, 946907 - 946811
Alignment:
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc-------cctgaagcgtggacgatgcaagccc 408  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||| | ||       |||||||||||||||||||||||||    
T  946907 atgtgggactaaatcccacccgagagttggccgctaacacaccccctcatgcttcagcccggtcccaacgagcctgaagcgtggacgatgcaagccc 946811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 19439914 - 19439839
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacac 358  Q
    ||||||||||| ||||||||||||||| |||||||  ||||||||||||||| | | ||||||||||||||||||||    
T  19439914 ctctttataaattcttctcaagaatcctatctatctgatgtgggactaaatc-ccctcgagtgttggccgctaacac 19439839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 9850527 - 9850446
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaat---ctcacccgagtgttggccgctaacacac 360  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||| |||||   | ||||||||||||||| ||||||||||    
T  9850527 ctctatataaactcttatcaagaatcctatctatccaatgtgggaataaatccacccacccgagtgttggctgctaacacac 9850446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 38131818 - 38131767
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  38131818 ctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 38131767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 395418 - 395375
Alignment:
Q  285 tttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  395418 tttataaactcttatcaagaatcctatctatccaatgtgggact 395375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 873746 - 873797
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||| |||||||||||||||||| ||| |||||||| |||||||||||||||    
T  873746 ctctctataaactcttctcaagagtcctatctatccgatgtgggactaaatc 873797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 1028143 - 1028194
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  1028143 ctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 1028194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 29432466 - 29432415
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||| |||||| ||| ||||| ||||||||||||||||||    
T  29432466 ctctttataaactcttatcaagagtcctatctaaccaatgtgggactaaatc 29432415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 33040117 - 33040042
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||| ||||||||||| |||||||||| || ||| | ||||| ||||||||| ||||| |||||| ||||||||||    
T  33040117 ctctatataaactcttttcaagaatcctatatattcgatgtgagactaaatcccacccaagtgttagccgctaaca 33040042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 37995684 - 37995735
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  37995684 ctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 37995735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 39668467 - 39668518
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||    
T  39668467 ctctttataaattcttctcaagaatcatatctatccgatgtgggactaaatc 39668518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 377
Target Start/End: Original strand, 24792192 - 24792246
Alignment:
Q  323 gggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcc 377  Q
    ||||| |||||||||| ||| |||||||| |||||||| ||||||||||||||||    
T  24792192 gggacaaaatctcacctgagagttggccgttaacacaccccctcacgcttcagcc 24792246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 27760128 - 27760078
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||| ||||||||||||||| ||| |||||||| |||||||||||||||    
T  27760128 tctttagaaactcttctcaagagtcctatctatccgatgtgggactaaatc 27760078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 18541776 - 18541702
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacac 358  Q
    ||||||||||||| ||||||||||||  |||||||| || |  ||||||||||   |||||||||||||||||||||    
T  18541776 ctctttataaactattctcaagaatcttatctatccgatcttagactaaatct--accgagtgttggccgctaacac 18541702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 396314 - 396263
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||| |||| |||||| ||| |||||| |||||||||||||||||    
T  396314 ctctttataaagtcttatcaagagtcctatctattcaatgtgggactaaatc 396263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 13843751 - 13843700
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||  |||||||||||||||    
T  13843751 ctctttataaactcttctcaagagtactatctatctgatgtgggactaaatc 13843700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 13844067 - 13844016
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||  |||||||||||||||    
T  13844067 ctctttataaactcttctcaagagtactatctatcagatgtgggactaaatc 13844016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 946760 - 946722
Alignment:
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  946760 atgtgggactaaatcccacccgagagttggccgctaaca 946722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 24792111 - 24792161
Alignment:
Q  231 taacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga 281  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||    
T  24792111 taacgaatatcgaggtctaactcattcttacaaaaccggcttgtacggtga 24792161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 28009848 - 28009898
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||| | | |||||||  |||||||||||||||    
T  28009848 tctttataaactcttctcaagagttctatctatctgatgtgggactaaatc 28009898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 30870935 - 30870977
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgg 324  Q
    ||||||||||||||||||||||||||  |||||||| ||||||    
T  30870935 ctctttataaactcttctcaagaatcttatctatccgatgtgg 30870977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 35527038 - 35527084
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  35527038 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 35527084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 38376785 - 38376739
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  38376785 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 38376739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 43490306 - 43490352
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  43490306 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 43490352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 3762960 - 3762915
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggac 327  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||||    
T  3762960 ctctttataaactcttctcaagagtcttatctatccgatgtgggac 3762915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 1e-40; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 233 - 408
Target Start/End: Original strand, 46528914 - 46529104
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||          ||||||||||||||||||||||||||| |||||||| ||||    
T  46528914 acgaatatcgaggcctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatccaatctatccgatgt 46529013  T
Q  323 gggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc------cctgaagcgtggacgatgcaagccc 408  Q
    | ||||||||| || |||||||||||| |||||||||| ||||| ||||||||||| ||||      |||||||||||||||||||||||||    
T  46529014 gagactaaatccca-ccgagtgttggctgctaacacaccccctcgcgcttcagcccggcccaatgggcctgaagcgtggacgatgcaagccc 46529104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 233 - 357
Target Start/End: Complemental strand, 11290282 - 11290148
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||          ||||||||||||||||||||||| ||| |||||||| ||||    
T  11290282 acgaatattgaggcctaactcatccatacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgt 11290183  T
Q  323 gggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||| |||||||| ||||||||||||||    
T  11290182 gggactaaatcccacccgagagttggccgctaaca 11290148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 233 - 358
Target Start/End: Original strand, 50868004 - 50868139
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    |||||||| ||||||| ||||||| |||||||||||| |||||||||||          ||||||||||||||||||||||| ||| |||||||| ||||    
T  50868004 acgaatattgaggcctgactcatccatacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgt 50868103  T
Q  323 gggactaaatctcacccgagtgttggccgctaacac 358  Q
    ||||||||||| |||||||| ||||| |||||||||    
T  50868104 gggactaaatcccacccgagagttggtcgctaacac 50868139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 52810675 - 52810799
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagc 381  Q
    ||||||||||||||||||||||||||  |||||||| |||| |||||||||  ||   ||||||||||||||||||||| ||||||||||||||||| ||    
T  52810675 ctctttataaactcttctcaagaatcttatctatccgatgtaggactaaattccatt-gagtgttggccgctaacacaccccctcacgcttcagcccggc 52810773  T
Q  382 cc------cctgaagcgtggacgatg 401  Q
    ||      ||||||||||||||||||    
T  52810774 ccaatgggcctgaagcgtggacgatg 52810799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 33912160 - 33912023
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||| |||||||||||||||||||||  ||||||||||| || ||| ||||          |||||||||||||||||||||| |||| ||||| ||     
T  33912160 tgtaacaaatatcgaggcctaactcatccttacaaaaccggcttatacagtgaggagtgcctcctctttataaactcttctcaagtatcctatctacccg 33912061  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  33912060 atgtgggactaaatccca-ccgagtgttggccgctaaca 33912023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 47845839 - 47845769
Alignment:
Q  285 tttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaa 355  Q
    ||||||||||||||||||||| || |||||||| | ||||||||||||| ||||||||||||||| |||||    
T  47845839 tttataaactcttctcaagaaacctatctatccgacgtgggactaaatcccacccgagtgttggctgctaa 47845769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 285 - 358
Target Start/End: Complemental strand, 4026124 - 4026052
Alignment:
Q  285 tttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacac 358  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||| || | ||||||||||||| |||||    
T  4026124 tttataaactcttctcaagaatcctatctatccgatgtgggactaaatccca-ctgagtgttggccgccaacac 4026052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 228 - 357
Target Start/End: Complemental strand, 2016650 - 2016512
Alignment:
Q  228 gtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcc 317  Q
    ||||||||||| ||||||||||||||| || ||||||| ||| || ||||||||          ||||||||||||||||||||||||||| |||||||     
T  2016650 gtgtaacgaatgtcgaggcctaactcaactctacaaaatcggcttatacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatct 2016551  T
Q  318 aatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
     ||||| ||||||||| | | |||||||||||| ||||||    
T  2016550 gatgtgagactaaatc-ccctcgagtgttggccactaaca 2016512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 37097781 - 37097855
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||| ||||||||||||||| |||||||  ||||||||||||||| || ||||||||||| ||||||||    
T  37097781 ctctttataaaatcttctcaagaatcctatctatctgatgtgggactaaatccca-ccgagtgttggtcgctaaca 37097855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 5427182 - 5427106
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacaca 359  Q
    ||||||||||||||||||||| ||||  |||||||||||||||| ||||| | || || |||||||||||||||||||    
T  5427182 ctctttataaactcttctcaaaaatcttatctatccaatgtggggctaaacccca-ccaagtgttggccgctaacaca 5427106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 359
Target Start/End: Original strand, 52810902 - 52810978
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacaca 359  Q
    |||||| | |||||||||||||||||   ||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  52810902 ctctttttgaactcttctcaagaatcttttctatccgatgtgggactaaatccca-ccgagtgttggccgctaacaca 52810978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 26941915 - 26941840
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacac 358  Q
    |||| ||||||||||||||||| || | |||||| | ||||||||||||||| || |||||||||||||||||||||    
T  26941915 ctctatataaactcttctcaaggatactatctattcgatgtgggactaaatccca-ccgagtgttggccgctaacac 26941840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 285 - 357
Target Start/End: Original strand, 37288922 - 37288993
Alignment:
Q  285 tttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||| || |||| ||||||| |||||||    
T  37288922 tttataaactcttctcaagaatcatatctatccgatgtgggactaaatccca-ccgattgttggcagctaaca 37288993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 51469535 - 51469484
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  51469535 ctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 51469484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 13254436 - 13254386
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  13254436 tctttataaactcttctcaatagtcctatctatccaatgtgggactaaatc 13254386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 294 - 383
Target Start/End: Original strand, 37288700 - 37288788
Alignment:
Q  294 tcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    |||||||||||||| ||||||||| ||||||||| ||||| || ||||||| |||  | |||||||  ||||||| ||||||||||||||    
T  37288700 tcttctcaagaatctcatctatccgatgtgggacaaaatccca-ccgagtgctggtggttaacacagcccctcacccttcagcccagccc 37288788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 303 - 378
Target Start/End: Complemental strand, 42901851 - 42901775
Alignment:
Q  303 gaatcccatctatccaatgtgggactaaatctcacccgagtg-ttggccgctaacacacaccctcacgcttcagccc 378  Q
    |||||| |||||||  ||||||||||||||| |||||||| | ||||| |||||||||| |||||||||||| ||||    
T  42901851 gaatcctatctatctgatgtgggactaaatcccacccgagagtttggcagctaacacaccccctcacgcttctgccc 42901775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 15665207 - 15665156
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||| |||||||||||||||||| ||| |||||||| |||||||||||||||    
T  15665207 ctctatataaactcttctcaagagtcctatctatccgatgtgggactaaatc 15665156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 22867138 - 22867087
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| ||| |||||||| | |||||||||||||    
T  22867138 ctctttataaactcttctcaagagtcctatctatccgacgtgggactaaatc 22867087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 29669413 - 29669464
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  29669413 ctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 29669464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 43972093 - 43972042
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||| |||||||||||||| ||| |||||||||| |||||||||||||    
T  43972093 ctctttatcaactcttctcaagagtcctatctatccaacgtgggactaaatc 43972042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 51470533 - 51470486
Alignment:
Q  286 ttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  51470533 ttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 51470486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 53740236 - 53740185
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  53740236 ctctttataaactcttctcaagagtactatctatccgatgtgggactaaatc 53740185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 43798183 - 43798228
Alignment:
Q  288 ataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||| || ||||| |||||||||||||||    
T  43798183 ataaactcttctcaagaatcctatatatccgatgtgggactaaatc 43798228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 36558515 - 36558567
Alignment:
Q  281 actctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||| | ||  |||||||| |||||||||||||||    
T  36558515 actctttataaactcttctcaaaagtcatatctatccgatgtgggactaaatc 36558567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 29669728 - 29669779
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||  |||||||||||||||    
T  29669728 ctctttataaactcttctcaagagtgctatctatctgatgtgggactaaatc 29669779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 326
Target Start/End: Original strand, 33797160 - 33797203
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtggga 326  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||    
T  33797160 tctttataaactcttatcaagagtcctatctatccaatgtggga 33797203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 45426986 - 45427037
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| ||||||| |||||||    
T  45426986 ctctttataaactcttctcaagagtactatctatccgatgtggggctaaatc 45427037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 47846076 - 47846029
Alignment:
Q  310 atctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||| ||||||||||||||||||||||||| ||||  |||||||    
T  47846076 atctatccgatgtgggactaaatctcacccgagtattggatgctaaca 47846029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 49544386 - 49544335
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||||||  |||||||| |||||| || |||||    
T  49544386 ctctttataaactcttctcaagaatcttatctatccgatgtggaacaaaatc 49544335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 50858382 - 50858331
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||  |||||||||||||||    
T  50858382 ctctttataaactcttctcaagagtactatctatctgatgtgggactaaatc 50858331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 53738258 - 53738309
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| ||  |||||| | |||||||||||||||    
T  53738258 ctctttataaactcttctcaagagtcttatctattctatgtgggactaaatc 53738309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 53739920 - 53739869
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| || ||||||||||||    
T  53739920 ctctttataaactcttctcaagagtactatctatccgatatgggactaaatc 53739869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 56509663 - 56509612
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||  ||| |||||||| |||| ||||||||||    
T  56509663 ctctttataaactcttctcaagggtcctatctatccgatgtaggactaaatc 56509612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 990601 - 990551
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaat 332  Q
    ||||||||||||||||||||||| |   |||||||| ||||||||||||||    
T  990601 ctctttataaactcttctcaagagtgttatctatccgatgtgggactaaat 990551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 3055837 - 3055791
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    |||||||||||||||  |||||| ||| |||||||||||||||||||    
T  3055837 ctctttataaactctcatcaagagtcctatctatccaatgtgggact 3055791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 7198036 - 7198082
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    |||||||||||||||| |||||| ||  |||||||||||||||||||    
T  7198036 ctctttataaactcttatcaagagtcttatctatccaatgtgggact 7198082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 43943727 - 43943681
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  43943727 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 43943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 43972409 - 43972359
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaat 332  Q
    |||||||| |||| ||||||||| ||| |||||||| ||||||||||||||    
T  43972409 ctctttatcaacttttctcaagagtcctatctatccgatgtgggactaaat 43972359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 50858065 - 50858015
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||| ||||||||||| | | |||||||| |||||||||||||||    
T  50858065 tctttataaaatcttctcaagagtactatctatccgatgtgggactaaatc 50858015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 52827282 - 52827328
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    |||||||||||||||| |||||| ||| |||||||||||||| ||||    
T  52827282 ctctttataaactcttatcaagagtcctatctatccaatgtgagact 52827328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 42901924 - 42901887
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaac 266  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  42901924 tgtaacgaatatcgaggtctaactcatccatacaaaac 42901887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 49380714 - 49380669
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggac 327  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||    
T  49380714 ctctttataaactcttctcaagagtcttatctatccaatgtaggac 49380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 1e-37; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 233 - 383
Target Start/End: Original strand, 48511401 - 48511563
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||||          ||||||||||||||||||||||| ||| |||||||| ||||    
T  48511401 acgaatattgaggcctaactcatctagacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgt 48511500  T
Q  323 gggactaaatctcacccgagtgttggccgctaacacaca--ccctcacgcttcagcccagccc 383  Q
    ||||||||||| |||||||| ||||||||||||||||||  ||||||||||||||||| ||||    
T  48511501 gggactaaatcccacccgagagttggccgctaacacacaccccctcacgcttcagcccggccc 48511563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 233 - 378
Target Start/End: Original strand, 10450415 - 10450570
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    ||||||||||||||||||||||||   |||||||| | |||||||||||          ||| |||||||||||||||||||| || |||||||| ||||    
T  10450415 acgaatatcgaggcctaactcatccccacaaaaccagcttgtacggtgaggagtgcctcctcgttataaactcttctcaagaaacctatctatccgatgt 10450514  T
Q  323 gggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagccc 378  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  10450515 gggactaaatcccacccgagtgttggctgctaacacaccccctcacgcttcagccc 10450570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 233 - 358
Target Start/End: Original strand, 10450639 - 10450774
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    ||||||||||||||||||||||||   |||||||||| |||||||||||          |||||||||||||||||||||||| || |||||||| ||||    
T  10450639 acgaatatcgaggcctaactcatccccacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgt 10450738  T
Q  323 gggactaaatctcacccgagtgttggccgctaacac 358  Q
    ||||||||||| ||||||||||||||| ||||||||    
T  10450739 gggactaaatcccacccgagtgttggctgctaacac 10450774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 9180485 - 9180322
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||| |||||||||||||||||| |||  ||||||||| | |||||||||||          ||||||||||||| ||||||||||||| ||||||||     
T  9180485 tgtaatgaatatcgaggcctaactgatccttacaaaaccagcttgtacggtgaggagtgtctcctctttataaacttttctcaagaatcctatctatccg 9180386  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    ||||||||||||||| |   |||| ||||||||||||||||| | ||||||||||||||||||||    
T  9180385 atgtgggactaaatc-cgatcgagggttggccgctaacacacccactcacgcttcagcccagccc 9180322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 239 - 357
Target Start/End: Original strand, 15820602 - 15820730
Alignment:
Q  239 atcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||  ||||||||||| |||||||||||          ||| ||||||||||||||||||||||| |||||||| ||||||||||    
T  15820602 atcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgtctcctcgttataaactcttctcaagaatcctatctatccgatgtgggact 15820701  T
Q  329 aaatctcacccgagtgttggccgctaaca 357  Q
    ||||| ||||||||||||||| |||||||    
T  15820702 aaatcccacccgagtgttggctgctaaca 15820730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 233 - 383
Target Start/End: Original strand, 40769903 - 40770062
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    |||||||| ||||||||||||||| |||||||||||| |||||| ||||          |||||||| |||||||| ||| ||||  |||||||| ||||    
T  40769903 acgaatattgaggcctaactcatccatacaaaaccggcttgtacagtgaggagtgtctcctctttatgaactcttcacaataatcatatctatccgatgt 40770002  T
Q  323 gggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    ||||||||||| | | |||||||||||||||||||||| ||||||||||| ||||||||||    
T  40770003 gggactaaatccc-ctcgagtgttggccgctaacacaccccctcacgctttagcccagccc 40770062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 53966287 - 53966210
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacaca 359  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  53966287 ctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccacccgagagttggccgctaacaca 53966210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 24453895 - 24453758
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||||||||          || ||||||||||||||||||||| || ||||||||     
T  24453895 tgtaacgaatatcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctgtttataaactcttctcaagaaccctatctatccg 24453796  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| | | |||||||||||||||||||    
T  24453795 atgtgggactaaatc-ccctcgagtgttggccgctaaca 24453758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 227 - 357
Target Start/End: Original strand, 42190462 - 42190601
Alignment:
Q  227 agtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga-------ctctt--tataaactcttctcaagaatcccatctatcc 317  Q
    |||||||||||||||||||||||||||||| ||| |||| ||| |||||||||||       ||| |  |||||||||||||||||| ||| ||||||||    
T  42190462 agtgtaacgaatatcgaggcctaactcatccatataaaatcggtttgtacggtgaagagtgcctcctcttataaactcttctcaagattcctatctatcc 42190561  T
Q  318 aatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
     |||||||| |||||| |||||||| ||||||||||||||    
T  42190562 gatgtgggattaaatcccacccgagagttggccgctaaca 42190601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 233 - 348
Target Start/End: Original strand, 48511630 - 48511755
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgt 322  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||          ||||||||||||||||||||||| ||| |||||||| ||||    
T  48511630 acgaatattgaggcctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgt 48511729  T
Q  323 gggactaaatctcacccgagtgttgg 348  Q
    ||||||||||| |||||||| |||||    
T  48511730 gggactaaatcccacccgagagttgg 48511755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 11244536 - 11244666
Alignment:
Q  237 atatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtggga 326  Q
    |||||||| |||||||||||  ||||||||||| |||||||||||          |||||||||||||||||||||||| || |||||||| ||||||||    
T  11244536 atatcgagacctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtggga 11244635  T
Q  327 ctaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||| ||||||||||||| | |||||||    
T  11244636 ctaaatcccacccgagtgttgactgctaaca 11244666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 282 - 383
Target Start/End: Original strand, 22666368 - 22666467
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagc 381  Q
    ||||||||||||||||||||||||||| |||||||| | ||||||||||||||   | || ||||| | |||||||||||||||||||||||||||| ||    
T  22666368 ctctttataaactcttctcaagaatcctatctatccgacgtgggactaaatct--actgaatgttgactgctaacacacaccctcacgcttcagcccggc 22666465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 282 - 377
Target Start/End: Original strand, 10453753 - 10453846
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcc 377  Q
    |||||||||||| |||||||||||||| |||||||| || |||||||||||| || || ||||||||| |||||||||| ||||||| ||||||||    
T  10453753 ctctttataaacccttctcaagaatcctatctatccgatctgggactaaatc-ca-ccaagtgttggctgctaacacaccccctcacacttcagcc 10453846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 51734606 - 51734681
Alignment:
Q  281 actctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacac 358  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||||| ||||||||    
T  51734606 actccttataaactcttctcaagaatcctatctatccgatgtgggactaaatc-ca-ccgagtgttggctgctaacac 51734681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 9179187 - 9179114
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaac 356  Q
    |||||||||||||||||||| |||||   ||||||| ||||||||||||||| || |||||||||||||||||||    
T  9179187 ctctttataaactcttctcatgaatcatgtctatccgatgtgggactaaatccca-ccgagtgttggccgctaac 9179114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 10856676 - 10856750
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||||||| |||||||||| ||| |||| ||||||||||||||| || || ||| |||||||||||||    
T  10856676 ctctttataaactcttttcaagaatcctatccatccgatgtgggactaaatccca-ccaagtattggccgctaaca 10856750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 13769341 - 13769392
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  13769341 ctctttataaactcttctcaagagtgctatctatccaatgtgggactaaatc 13769392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 45443334 - 45443283
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  45443334 ctctttataaactcttctcaagagtgctatctatccaatgtgggactaaatc 45443283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 48837058 - 48837132
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||| |||| ||||||||||| ||||| |||||||| ||||||||||||||| || |||||||||||| |||||||    
T  48837058 ctctatatatactcttctcaataatcctatctatccgatgtgggactaaatccca-ccgagtgttggcagctaaca 48837132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 54369093 - 54369042
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  54369093 ctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 54369042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 282 - 351
Target Start/End: Complemental strand, 9178961 - 9178893
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccg 351  Q
    |||||||||||||||||| |||||||| |||||||| || ||||||||||| ||  ||||||||||||||    
T  9178961 ctctttataaactcttcttaagaatcctatctatccgatatgggactaaat-tccaccgagtgttggccg 9178893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 334
Target Start/End: Original strand, 5321586 - 5321638
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatct 334  Q
    |||||||||||||||| |||| ||||| |||||||| ||||||||||||||||    
T  5321586 ctctttataaactcttttcaaaaatcctatctatccgatgtgggactaaatct 5321638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 354
Target Start/End: Original strand, 16060872 - 16061006
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgac----------tctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||| |||||||||| |||||||||||  ||||||||| | |||||||||||           ||||||||||||||||||||||||   || |||||     
T  16060872 tgtaatgaatatcgagacctaactcatccttacaaaaccagcttgtacggtgaagagtgtctcatctttataaactcttctcaagaatattatatatccg 16060971  T
Q  319 atgtgggactaaatctcacccgagtgttggccgcta 354  Q
    ||||||||||||||| ||  ||||||||||||||||    
T  16060972 atgtgggactaaatccca-tcgagtgttggccgcta 16061006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 16051522 - 16051659
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||| |||||||||| |||||||||||  ||||||||||| |||||||||||           ||||||||||||||||||||||||   || ||||      
T  16051522 tgtaatgaatatcgagacctaactcatccttacaaaaccggcttgtacggtgaagaatgtctcatctttataaactcttctcaagaatattatatatctg 16051621  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| ||   ||||||||||||||||||    
T  16051622 atgtgggactaaatccca-ttgagtgttggccgctaaca 16051659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 27219383 - 27219332
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  27219383 ctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 27219332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 41380778 - 41380727
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  41380778 ctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 41380727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 43101421 - 43101472
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| ||| |||||||  |||||||||||||||    
T  43101421 ctctttataaactcttctcaagagtcctatctatctgatgtgggactaaatc 43101472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 44573380 - 44573329
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  44573380 ctctttataaactcttctcaagagtactatctatccgatgtgggactaaatc 44573329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 47833712 - 47833763
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||| |||||||||| ||| |||||||| |||||||||||||||    
T  47833712 ctctttataaacacttctcaagagtcctatctatccgatgtgggactaaatc 47833763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 2800013 - 2800062
Alignment:
Q  284 ctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||    
T  2800013 ctttataaactcatcttaagaatcctatctatccgatgtgggactaaatc 2800062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 16045423 - 16045491
Alignment:
Q  285 tttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgcta 354  Q
    ||||||||||||||||||||||   || ||||| ||||||||||||||| ||  ||||||||||||||||    
T  16045423 tttataaactcttctcaagaatattatatatccgatgtgggactaaatccca-tcgagtgttggccgcta 16045491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 3985827 - 3985776
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||| | ||  |||||||| |||||||||||||||    
T  3985827 ctctttataaactcttctcaaaagtcatatctatccgatgtgggactaaatc 3985776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 34715505 - 34715556
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||| | | | |||||||| |||||||||||||||    
T  34715505 ctctttataaactcttctcaaaagtgctatctatccgatgtgggactaaatc 34715556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 48685367 - 48685418
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | || ||||| |||||||||||||||    
T  48685367 ctctttataaactcttctcaagagtactatatatccgatgtgggactaaatc 48685418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 276
Target Start/End: Complemental strand, 53966370 - 53966323
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtac 276  Q
    ||||| |||||| ||||||||||||||| |||||||||||| ||||||    
T  53966370 tgtaatgaatattgaggcctaactcatccatacaaaaccggcttgtac 53966323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 4029694 - 4029740
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  4029694 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 4029740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 10856617 - 10856659
Alignment:
Q  233 acgaatatcgaggcctaactcatctatacaaaaccggattgta 275  Q
    ||||||||||||||||||||||||  ||||||||||| |||||    
T  10856617 acgaatatcgaggcctaactcatccttacaaaaccggcttgta 10856659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 42258964 - 42258918
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||| ||||||||||||||||  |||||||| ||||||||||    
T  42258964 ctctttatatactcttctcaagaatcttatctatccgatgtgggact 42258918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 49477588 - 49477542
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  49477588 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 49477542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 54495585 - 54495539
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  54495585 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 54495539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 497
Target Start/End: Original strand, 10450516 - 10450549
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaaca 497  Q
    ||||||||||||||| ||||||||||||||||||    
T  10450516 ggactaaatcccacccgagtgttggctgctaaca 10450549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 497
Target Start/End: Original strand, 10450740 - 10450773
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaaca 497  Q
    ||||||||||||||| ||||||||||||||||||    
T  10450740 ggactaaatcccacccgagtgttggctgctaaca 10450773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 497
Target Start/End: Original strand, 15820697 - 15820730
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaaca 497  Q
    ||||||||||||||| ||||||||||||||||||    
T  15820697 ggactaaatcccacccgagtgttggctgctaaca 15820730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 50203907 - 50203956
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaa 331  Q
    ||||||||||||||||||||||| ||  |||||||| ||||| |||||||    
T  50203907 ctctttataaactcttctcaagagtcttatctatccgatgtgagactaaa 50203956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 2e-33; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 282 - 383
Target Start/End: Original strand, 11349843 - 11349944
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagc 381  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||    
T  11349843 ctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatcccacccgagtgttggctgctaacacaccccctcacgcttcggcccagc 11349942  T
Q  382 cc 383  Q
    ||    
T  11349943 cc 11349944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 229 - 383
Target Start/End: Original strand, 11350174 - 11350338
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||| || ||||||||||| |||||||||||| || ||||||||          |||||||||||||||||||||||| || ||||||||     
T  11350174 tgtaacgaatatcaagacctaactcatccatacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccg 11350273  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    || |||||||||||| ||||||||||||||| |||||||| | || |||||||||||||||||||    
T  11350274 atatgggactaaatcccacccgagtgttggctgctaacaccccccgtcacgcttcagcccagccc 11350338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 229 - 378
Target Start/End: Original strand, 15961787 - 15961946
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||||||||| |||||||||||||||  ||||||||||| |||||||||||          |||||||||||   ||||||||| ||| ||||||||     
T  15961787 tgtaacgaatattgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaaagattctcaagattcctatctatccg 15961886  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagccc 378  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  15961887 atgtgggactaaatcccacccgagagttggccgctaacacaccccctcacgcttcagccc 15961946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 282 - 408
Target Start/End: Original strand, 10861884 - 10862015
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagc 381  Q
    ||||||||||||||||||||||||||| || |||||||| |||||||||||| | | |||||||||||||||||||||| |||||||||||||||||  |    
T  10861884 ctctttataaactcttctcaagaatcctatatatccaatatgggactaaatc-ccctcgagtgttggccgctaacacaccccctcacgcttcagcccgac 10861982  T
Q  382 cc------cctgaagcgtggacgatgcaagccc 408  Q
    ||      |||||||||||||||||||||||||    
T  10861983 ccaatgggcctgaagcgtggacgatgcaagccc 10862015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 10862423 - 10862260
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||||||||||||||||||||||| || |||||||| || |||||||||||          |||||||||||||||||| || ||||  ||||||||     
T  10862423 tgtaacgaatatcgaggcctaactcacctttacaaaactggcttgtacggtgatgagtgtctcctctttataaactcttctaaaaaatcttatctatccg 10862324  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    ||||||||||||||| | | |||||||||||||||||||||| |||| |||||||||||| ||||    
T  10862323 atgtgggactaaatccc-ctcgagtgttggccgctaacacacccccttacgcttcagcccggccc 10862260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 235 - 356
Target Start/End: Complemental strand, 936923 - 936792
Alignment:
Q  235 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgg 324  Q
    |||||||||||||||||||||||||||||||| || |||||||||||          ||||||||||||||||||||||| ||| |||||||| |||||     
T  936923 gaatatcgaggcctaactcatctatacaaaactggcttgtacggtgaggagtgtctcctctttataaactcttctcaagattcctatctatccgatgtga 936824  T
Q  325 gactaaatctcacccgagtgttggccgctaac 356  Q
    ||||||||| |||||||| |||||||||||||    
T  936823 gactaaatcccacccgagagttggccgctaac 936792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 15962144 - 15962282
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||||||||| |||||||||||||||  ||||||||||| |||||||||||          ||||||||||||| ||||||||| ||| ||||||||     
T  15962144 tgtaacgaatatagaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagattcctatctatccg 15962243  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  15962244 atgtgggactaaatcccacccgagagttggccgctaaca 15962282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 39420814 - 39420676
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||| ||||          ||||||||||||||||||||| | ||| ||||||||     
T  39420814 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtactgtgaggagtgcctcctctttataaactcttctcaaaattcctatctatccg 39420715  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  39420714 atgtgggactaaatcccacccgagagttggccgctaaca 39420676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 10862045 - 10862182
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||||||||| |||| ||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||||||| ||||||||     
T  10862045 tgtaacgaatatggaggtctaactcatccttacaaaaccggcttgtacggtgatgagtgcctcctctttataaactcttctcaagaatcctatctatccg 10862144  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| | | |||||||||||||||||||    
T  10862145 atgtgggactaaatc-ccctcgagtgttggccgctaaca 10862182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 32810863 - 32811001
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||   |||||||||| ||||| |||||          |||||||||||||||| |||||||||| ||||||||     
T  32810863 tgtaacgaatatcgaggcctaactcatccccacaaaaccggcttgtaaggtgatgattgtctcctctttataaactcttatcaagaatcctatctatccg 32810962  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||| ||||||||||| ||||||||||||||| |||||||    
T  32810963 atgcgggactaaatcccacccgagtgttggctgctaaca 32811001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 14280334 - 14280259
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| |||||||||| |||||||    
T  14280334 ctctttataaactcttctcatgaatcctatctatccaatgtgggactaaatcccacctgagtgttggctgctaaca 14280259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 4506090 - 4506164
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||||| |||||||    
T  4506090 ctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatccca-ccgagtgttggcagctaaca 4506164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 227 - 357
Target Start/End: Original strand, 33532721 - 33532860
Alignment:
Q  227 agtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatc 316  Q
    ||||| ||||||||| || ||||||||| |  ||||||||||| |||||||||||          ||||||||||||||||||||||||||| |||||||    
T  33532721 agtgtcacgaatatcaagacctaactcaaccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatc 33532820  T
Q  317 caatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    | ||||||||||||||| | | |||||||||||| ||||||    
T  33532821 cgatgtgggactaaatc-ccctcgagtgttggccactaaca 33532860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 28193625 - 28193699
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||| ||||||||||||||| |||||||  ||||||||||||||| | | |||||||||||||||||||    
T  28193625 ctctttataaaatcttctcaagaatcctatctatctgatgtgggactaaatc-ccctcgagtgttggccgctaaca 28193699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 304 - 378
Target Start/End: Original strand, 15962000 - 15962080
Alignment:
Q  304 aatcccatctatccaatgtgggactaaatctcacccgagtgttggccg------ctaacacacaccctcacgcttcagccc 378  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||      ||||||||| |||||||||||||||||    
T  15962000 aatcctatctatccaatgtgggactaaatcccacccgagagttggccgctaagtctaacacaccccctcacgcttcagccc 15962080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 383
Target Start/End: Complemental strand, 32197256 - 32197156
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagc 381  Q
    ||||||||||| |||| || ||||||| || |||   ||||||||||||||| || | |||||||||||||||||| || ||||||||||||||||| ||    
T  32197256 ctctttataaattcttttcgagaatcctatatataagatgtgggactaaatcccatc-gagtgttggccgctaacataccccctcacgcttcagcccggc 32197158  T
Q  382 cc 383  Q
    ||    
T  32197157 cc 32197156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 4342308 - 4342383
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacac 358  Q
    |||||||| |||||| ||||||||| | |||||||| ||||||||||||||| || | |||||||||||||||||||    
T  4342308 ctctttattaactctcctcaagaattctatctatccgatgtgggactaaatccca-ctgagtgttggccgctaacac 4342383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 285 - 357
Target Start/End: Original strand, 28193388 - 28193459
Alignment:
Q  285 tttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||| | | ||||||||||||| |||||    
T  28193388 tttataaactcttctcaagaatcctatctatccgatgtgagactaaatc-ccctcgagtgttggccgataaca 28193459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 21213935 - 21213986
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  21213935 ctctttataaactcttctcaagagtactatctatccaatgtgggactaaatc 21213986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 358
Target Start/End: Original strand, 36161340 - 36161473
Alignment:
Q  235 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatct-atccaatgtg 323  Q
    |||||||||| |||||||||||  ||||||||||| |||||||||||          |||||| |||||||||||||||||||| |||| |||| |||||    
T  36161340 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctcttt-taaactcttctcaagaatcctatcttatccgatgtg 36161438  T
Q  324 ggactaaatctcacccgagtgttggccgctaacac 358  Q
    |||||||||| || | ||| ||||||||| |||||    
T  36161439 ggactaaatcccagctgagagttggccgccaacac 36161473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 17325281 - 17325173
Alignment:
Q  235 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgg 324  Q
    ||||||||||||||||||||||  ||||||||||| |||||| ||||          ||||||||||| |||||| |||||||| |||||||  ||||||    
T  17325281 gaatatcgaggcctaactcatccttacaaaaccggcttgtacagtgaagagtgcctcctctttataaattcttcttaagaatcctatctatcagatgtgg 17325182  T
Q  325 gactaaatc 333  Q
    |||||||||    
T  17325181 gactaaatc 17325173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 3976521 - 3976572
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||||||   |||||||| |||||||||||||||    
T  3976521 ctctttataaactcttctcaagaatattatctatccgatgtgggactaaatc 3976572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 3977053 - 3977104
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  3977053 ctctttataaactcttctcaagagtactatctatccgatgtgggactaaatc 3977104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 464 - 499
Target Start/End: Complemental strand, 14280292 - 14280257
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaacaat 499  Q
    ||||||||||||||||||||||||||||||||||||    
T  14280292 ggactaaatcccacctgagtgttggctgctaacaat 14280257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 21214251 - 21214302
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | ||||||| ||||||||||||||||    
T  21214251 ctctttataaactcttctcaagagtgctatctatctaatgtgggactaaatc 21214302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 43169296 - 43169245
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  43169296 ctctttataaactcttctcaagagtactatctatccgatgtgggactaaatc 43169245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 26847292 - 26847338
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    |||||||||||||||| |||||| ||| |||||||||||||||||||    
T  26847292 ctctttataaactcttatcaagagtcctatctatccaatgtgggact 26847338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 30166130 - 30166180
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  30166130 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 30166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 43195838 - 43195786
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatct 334  Q
    ||||||||||||||||||||||| | | |||||||  ||||||||||||||||    
T  43195838 ctctttataaactcttctcaagagtactatctatctgatgtgggactaaatct 43195786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 3976209 - 3976256
Alignment:
Q  286 ttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||| | | |||||||| |||||||||||||||    
T  3976209 ttataaactcttctcaagagtactatctatccgatgtgggactaaatc 3976256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 6183416 - 6183467
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||| ||||||    
T  6183416 ctctttataaactcttctcaagagtactatctatccgatgtgggattaaatc 6183467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 11969106 - 11969055
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| | |||||||||||||    
T  11969106 ctctttataaactcttctcaagagtactatctatccgacgtgggactaaatc 11969055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 298 - 357
Target Start/End: Original strand, 17326097 - 17326155
Alignment:
Q  298 ctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||| |||||||  |||||||||||||||||| |  |||||||||||||||||    
T  17326097 ctcaagaatcctatctatcagatgtgggactaaatctca-ctaagtgttggccgctaaca 17326155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 18901914 - 18901965
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||| |||||| ||  |||||||| |||||||||||||||    
T  18901914 ctctttataaactcttttcaagagtcttatctatccgatgtgggactaaatc 18901965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 25441750 - 25441699
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||  |||||||||||||||    
T  25441750 ctctttataaactcttctcaagagtactatctatctgatgtgggactaaatc 25441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 44266358 - 44266409
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||| ||||  |||||||  |||||||||||||||    
T  44266358 ctctttataaactcttctcaaaaatcttatctatctgatgtgggactaaatc 44266409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 883651 - 883697
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  883651 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 883697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 884111 - 884065
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||| ||||||||||||| || ||||||||| ||||||||||    
T  884111 ctctttatatactcttctcaagagtctcatctatccgatgtgggact 884065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 937038 - 936992
Alignment:
Q  337 cccgagtgttggccgctaacacacaccctcacgcttcagcccagccc 383  Q
    |||||| ||||||||| ||||||| ||||||||||||||||| ||||    
T  937038 cccgagagttggccgccaacacaccccctcacgcttcagcccggccc 936992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 6986466 - 6986512
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  6986466 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 6986512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 12419892 - 12419846
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  12419892 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 12419846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 12431952 - 12431906
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  12431952 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 12431906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 12432159 - 12432113
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  12432159 ctctttataaactcttctcaagattcttatctatccgatgtgggact 12432113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 17727458 - 17727412
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  17727458 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 17727412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 32810968 - 32811002
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaacaa 498  Q
    ||||||||||||||| |||||||||||||||||||    
T  32810968 ggactaaatcccacccgagtgttggctgctaacaa 32811002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 43688472 - 43688522
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||| ||| |||||||| ||||| || ||||||    
T  43688472 tctttataaactcttctcaagagtcctatctatccgatgtgagattaaatc 43688522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 497
Target Start/End: Original strand, 11349885 - 11349918
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaaca 497  Q
    ||||||||||||||| ||||||||||||||||||    
T  11349885 ggactaaatcccacccgagtgttggctgctaaca 11349918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 497
Target Start/End: Original strand, 11350279 - 11350312
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaaca 497  Q
    ||||||||||||||| ||||||||||||||||||    
T  11350279 ggactaaatcccacccgagtgttggctgctaaca 11350312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 14289180 - 14289143
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaa 319  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  14289180 ctctttataaactcttctcaagaatcttatctatccaa 14289143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 27545166 - 27545211
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggac 327  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||||    
T  27545166 ctctttataaactcttctcaagagtcttatctatccgatgtgggac 27545211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 2e-27; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 26842837 - 26842699
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||   |||||||| | |||||||||||          |||||||||||||||||||||||| || ||||||||     
T  26842837 tgtaacgaatatcgaggcctaactcatccccacaaaaccagcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccg 26842738  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  26842737 atgtgggactaaatcccacccgagtgttggctgctaaca 26842699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 282 - 375
Target Start/End: Complemental strand, 33396579 - 33396487
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcag 375  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| |||||||| |||||||||||||||||||||||||| || |||||||||||    
T  33396579 ctctttataaactcttctcaaaaatcctatctatccgatgtgg-actaaatcccacccgagtgttggccgctaacacaccccgtcacgcttcag 33396487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 33396361 - 33396286
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  33396361 ctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccaccctagtgttggccgctaaca 33396286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 282 - 408
Target Start/End: Complemental strand, 16194074 - 16193943
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagc 381  Q
    |||||||||||||||||| |||||||| || ||||| ||||||||||| ||||| | | |||||||||||||| ||||| ||||||||||||||||| |     
T  16194074 ctctttataaactcttctaaagaatcctatatatccgatgtgggactagatctc-ctctagtgttggccgctagcacaccccctcacgcttcagccccgt 16193976  T
Q  382 cc------cctgaagcgtggacgatgcaagccc 408  Q
    ||      |||||||||||||| ||||||||||    
T  16193975 ccaatggacctgaagcgtggactatgcaagccc 16193943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 25184120 - 25183982
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||||| ||||||||||||||||| |||   |||||||||| |||||||||||          |||||||||||||||| |||||||||  ||||||||     
T  25184120 tgtaacaaatatcgaggcctaacttatccccacaaaaccggcttgtacggtgaggattgtcttctctttataaactcttatcaagaatcttatctatccg 25184021  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    ||| ||||||||||| ||||||||||||||| |||||||    
T  25184020 atgcgggactaaatcccacccgagtgttggctgctaaca 25183982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 342
Target Start/End: Complemental strand, 25184327 - 25184204
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    ||||||||||||||||||||||||||||   |||||||||| ||||| |||||          |||||||||||||||| |||||||||| ||||||||     
T  25184327 tgtaacgaatatcgaggcctaactcatccccacaaaaccggcttgtaaggtgaggattgcttcctctttataaactcttatcaagaatcctatctatccg 25184228  T
Q  319 atgtgggactaaatctcacccgag 342  Q
    ||| ||||||||||| ||||||||    
T  25184227 atgcgggactaaatcccacccgag 25184204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 26339892 - 26339967
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacac 358  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||||||| | | ||||||||||| | ||||||    
T  26339892 ctctttataaactcttctcaagattcttatctatccgatgtgggactaaatc-ccctcgagtgttggctgttaacac 26339967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 8144071 - 8144020
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  8144071 ctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 8144020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 8427667 - 8427530
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatcca 318  Q
    |||| ||||||||||||||||||||| |  ||||||||||  |||||||||||          |||||| |||||||||||||||||||  || |||||     
T  8427667 tgtagcgaatatcgaggcctaactcaaccttacaaaaccgacttgtacggtgaggagtgcctcctctttctaaactcttctcaagaatcttatatatccg 8427568  T
Q  319 atgtgggactaaatctcacccgagtgttggccgctaaca 357  Q
    |||||  ||||||||||| |||| | |||||||||||||    
T  8427567 atgtgaaactaaatctca-ccgaatattggccgctaaca 8427530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 19753654 - 19753705
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| ||| |||||| | |||||||||||||||    
T  19753654 ctctttataaactcttctcaagagtcctatctataccatgtgggactaaatc 19753705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 21067107 - 21067158
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||||| | |||||||| || ||||||||||||    
T  21067107 ctctttataaactcttctcaagaatgctatctatccgatatgggactaaatc 21067158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 21088898 - 21088949
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||||| | |||||||| || ||||||||||||    
T  21088898 ctctttataaactcttctcaagaatgctatctatccgatatgggactaaatc 21088949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 24055160 - 24055210
Alignment:
Q  283 tctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  24055160 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 24055210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 1744892 - 1744940
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaa 330  Q
    |||||||||||||||| |||||| | | |||||||||||||||||||||    
T  1744892 ctctttataaactcttttcaagagtactatctatccaatgtgggactaa 1744940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 12134533 - 12134581
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaa 330  Q
    ||||||||||||||||||||||| | | |||||||| ||||||||||||    
T  12134533 ctctttataaactcttctcaagagtgctatctatccgatgtgggactaa 12134581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 282 - 334
Target Start/End: Original strand, 17096748 - 17096800
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatct 334  Q
    ||||||||||||||||||||||| ||| |||||| | ||||| ||||||||||    
T  17096748 ctctttataaactcttctcaagactcctatctattcgatgtgagactaaatct 17096800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 464 - 500
Target Start/End: Complemental strand, 26842732 - 26842696
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaacaata 500  Q
    ||||||||||||||| |||||||||||||||||||||    
T  26842732 ggactaaatcccacccgagtgttggctgctaacaata 26842696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 27443587 - 27443635
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaa 330  Q
    ||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  27443587 ctctttataaactcttctcaagaatcctatctatctgatgtggtactaa 27443635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 30718798 - 30718746
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga 281  Q
    |||||||||||||||| | ||||||||| | |||||||||| |||||||||||    
T  30718798 tgtaacgaatatcgagacttaactcatccacacaaaaccggcttgtacggtga 30718746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 10733488 - 10733539
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| |   |||| |||||||||||||||||||    
T  10733488 ctctttataaactcttctcaagagtgttatctgtccaatgtgggactaaatc 10733539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 21043831 - 21043882
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||||| | | |||||||| || ||||||||||||    
T  21043831 ctctttataaactcttctcaagagtgctatctatccgatatgggactaaatc 21043882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 27577839 - 27577885
Alignment:
Q  287 tataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    |||||||||||||||||||||  ||||||||  ||||||||||||||    
T  27577839 tataaactcttctcaagaatcttatctatccgttgtgggactaaatc 27577885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 497
Target Start/End: Complemental strand, 25184015 - 25183982
Alignment:
Q  464 ggactaaatcccacctgagtgttggctgctaaca 497  Q
    ||||||||||||||| ||||||||||||||||||    
T  25184015 ggactaaatcccacccgagtgttggctgctaaca 25183982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 282 - 383
Target Start/End: Complemental strand, 165838 - 165738
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcccagc 381  Q
    ||||||||||||||||||||||||| | |||||||| |||| |||||||||| | | |||||||||||||||||||||| ||||||||||||||||| ||    
T  165838 ctctttataaactcttctcaagaattctatctatccgatgtaggactaaatccc-ctcgagtgttggccgctaacacaccccctcacgcttcagcccggc 165740  T
Q  382 cc 383  Q
    ||    
T  165739 cc 165738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 48; Significance: 5e-18; HSPs: 3)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 229 - 359
Target Start/End: Original strand, 34637 - 34777
Alignment:
Q  229 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga-------ctctt--tataaactcttctcaagaatcccatctatccaa 319  Q
    |||||||||||||||||||||| |||||   |||||||||| ||||| |||||       ||| |  |||||||||||||||||| ||| |||||||| |    
T  34637 tgtaacgaatatcgaggcctaaatcatccccacaaaaccggtttgtaaggtgaggagtgcctcctcttataaactcttctcaagattcctatctatccga 34736  T
Q  320 tgtgggactaaatctca-cccgagtgttggccgctaacaca 359  Q
    | ||||||||||||||| |||||| ||||||||||||||||    
T  34737 tatgggactaaatctcaccccgagagttggccgctaacaca 34777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 377
Target Start/End: Original strand, 34575 - 34629
Alignment:
Q  323 gggactaaatctcacccgagtgttggccgctaacacacaccctcacgcttcagcc 377  Q
    ||||| |||||||||| ||| |||||||| |||||||| ||||||||||||||||    
T  34575 gggacaaaatctcacctgagagttggccgttaacacaccccctcacgcttcagcc 34629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 34494 - 34544
Alignment:
Q  231 taacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga 281  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||    
T  34494 taacgaatatcgaggtctaactcattcttacaaaaccggcttgtacggtga 34544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0785 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 2983 - 3035
Alignment:
Q  319 atgtgggactaaatctcacccgagtgttggccgctaacacacaccctcacgctt 372  Q
    ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  2983 atgtgggactaaatcccacc-gagtgttggccgctaacacaccccctcacgctt 3035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0785; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 3170 - 3221
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaaatc 333  Q
    ||||||||||||||||||||| ||| | |||||||| |||||||||||||||    
T  3170 ctctttataaactcttctcaaaaattctatctatccgatgtgggactaaatc 3221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 43774 - 43726
Alignment:
Q  282 ctctttataaactcttctcaagaatcccatctatccaatgtgggactaa 330  Q
    ||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  43774 ctctttataaactcttctcaagaatcctatctatctgatgtggtactaa 43726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 76954 - 76860
Alignment:
Q  244 ggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcccatctatccaatgtgggact 328  Q
    |||||||||||||| ||||||||||| ||||| |||||          ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  76954 ggcctaactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 76860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University