View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4657_high_20 (Length: 269)
Name: NF4657_high_20
Description: NF4657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4657_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 8 - 260
Target Start/End: Original strand, 42065204 - 42065456
Alignment:
| Q |
8 |
ttaatggatgaatatattatttaaagacaaattattaattatttgtttcatatactaatactactttctgacaagaacaaatccaggggaatcataaaac |
107 |
Q |
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| T |
42065204 |
ttaatggatgaatatattatttaaagacaaattattaattatttgtttcatatactaatactactttctgacaagaacaaatccaggggaatcataaaag |
42065303 |
T |
|
| Q |
108 |
acaagagaaaagaaaaatataattattttttaattcaaattcactctgtttttagaacaaaacaacagatcgggcttaatcaagtgctctgcatgttcta |
207 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42065304 |
acaagagaaaagaaaaatataattatttttgaattcaaattcactctgtttttagaacaaaacaacagatcgggcttaatcaagtgctctgcatgttcta |
42065403 |
T |
|
| Q |
208 |
caagcctaaattaatctaattattacaacaaaactcgatttattaagaataat |
260 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
42065404 |
caagcctaaattaatctaattattacaacaaaacttgatttattaagaataat |
42065456 |
T |
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