View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4657_high_21 (Length: 261)
Name: NF4657_high_21
Description: NF4657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4657_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 12974680 - 12974840
Alignment:
| Q |
1 |
tgtggattattgaacatcacacacaatgagcgtaaggctatacacaatgcgagtgtgcaatttgaatttttcctatatgttgaatttctcaaccaaaaat |
100 |
Q |
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| T |
12974680 |
tgtggattattgaacatcacacacgatgagcgtaaggctatacacaatgcgagtgtgcaatttgaatttttcctatatgttgaatttctcaaccaaaaat |
12974779 |
T |
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| Q |
101 |
aagcattttgaattatatatattatgactttaaggctaaaggttcgatcgagggagtagaagtggcg |
167 |
Q |
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| T |
12974780 |
aagcatttt------tatttattatgactttaaggctaaaggttcgatccagggagtagaagtggcg |
12974840 |
T |
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