View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4657_high_23 (Length: 250)

Name: NF4657_high_23
Description: NF4657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4657_high_23
NF4657_high_23
[»] chr5 (44 HSPs)
chr5 (92-237)||(26077646-26077791)
chr5 (1-116)||(40079979-40080095)
chr5 (1-85)||(14057738-14057822)
chr5 (1-85)||(19344649-19344733)
chr5 (1-115)||(30721635-30721750)
chr5 (1-118)||(9936838-9936956)
chr5 (1-114)||(14633007-14633121)
chr5 (2-68)||(33402542-33402608)
chr5 (1-85)||(1098205-1098289)
chr5 (1-85)||(13548243-13548327)
chr5 (1-85)||(20022890-20022974)
chr5 (1-85)||(20040365-20040449)
chr5 (3-114)||(27675540-27675652)
chr5 (1-68)||(41263079-41263146)
chr5 (3-56)||(5984998-5985051)
chr5 (1-85)||(1781095-1781179)
chr5 (1-68)||(2551577-2551644)
chr5 (1-68)||(30211691-30211758)
chr5 (3-62)||(32473974-32474033)
chr5 (1-62)||(27477688-27477749)
chr5 (1-46)||(28142997-28143042)
chr5 (1-46)||(40316887-40316932)
chr5 (3-68)||(40797024-40797089)
chr5 (1-46)||(41410609-41410654)
chr5 (3-87)||(8627163-8627247)
chr5 (1-85)||(14607507-14607591)
chr5 (1-85)||(31191127-31191211)
chr5 (1-68)||(1831111-1831178)
chr5 (1-68)||(14639665-14639732)
chr5 (1-68)||(20502998-20503065)
chr5 (1-68)||(30788252-30788319)
chr5 (1-60)||(35641824-35641883)
chr5 (3-46)||(39104231-39104274)
chr5 (1-68)||(40316578-40316645)
chr5 (1-87)||(2864101-2864187)
chr5 (1-43)||(6734853-6734895)
chr5 (1-98)||(34169845-34169943)
chr5 (1-46)||(1831420-1831465)
chr5 (1-70)||(4299878-4299947)
chr5 (2-95)||(14355519-14355612)
chr5 (29-70)||(25773384-25773425)
chr5 (1-54)||(27674278-27674331)
chr5 (3-68)||(30352023-30352088)
chr5 (1-57)||(39035618-39035674)
[»] chr2 (43 HSPs)
chr2 (1-88)||(15771031-15771118)
chr2 (1-71)||(18733969-18734039)
chr2 (1-85)||(5096278-5096362)
chr2 (1-68)||(10333527-10333594)
chr2 (1-115)||(25762193-25762308)
chr2 (1-85)||(7724560-7724644)
chr2 (1-85)||(8373464-8373548)
chr2 (1-85)||(12209019-12209103)
chr2 (1-85)||(38963825-38963909)
chr2 (1-85)||(40471766-40471850)
chr2 (1-60)||(5030339-5030398)
chr2 (1-68)||(16127729-16127796)
chr2 (1-68)||(41436879-41436946)
chr2 (1-54)||(4137470-4137523)
chr2 (1-86)||(8896300-8896385)
chr2 (1-62)||(11383994-11384055)
chr2 (1-86)||(16126031-16126116)
chr2 (1-97)||(18504489-18504586)
chr2 (3-60)||(25277884-25277941)
chr2 (15-70)||(3037874-3037929)
chr2 (1-84)||(5861514-5861597)
chr2 (1-56)||(7601346-7601401)
chr2 (1-87)||(41575590-41575676)
chr2 (1-87)||(43925102-43925188)
chr2 (1-86)||(16333509-16333594)
chr2 (3-68)||(37806829-37806894)
chr2 (1-54)||(37987885-37987938)
chr2 (1-46)||(45036432-45036477)
chr2 (1-85)||(6075155-6075239)
chr2 (3-87)||(22718494-22718578)
chr2 (15-71)||(33046199-33046255)
chr2 (1-68)||(1749121-1749188)
chr2 (1-68)||(2831754-2831821)
chr2 (1-115)||(25766443-25766558)
chr2 (1-87)||(2543864-2543950)
chr2 (158-216)||(27909539-27909597)
chr2 (3-85)||(31603367-31603449)
chr2 (1-54)||(9273414-9273467)
chr2 (1-46)||(15177438-15177483)
chr2 (1-54)||(20917876-20917929)
chr2 (1-58)||(30708875-30708932)
chr2 (3-68)||(43328752-43328817)
chr2 (1-120)||(42038670-42038790)
[»] chr8 (57 HSPs)
chr8 (1-114)||(13888577-13888691)
chr8 (1-68)||(7603354-7603421)
chr8 (1-68)||(25118833-25118900)
chr8 (3-70)||(35584123-35584190)
chr8 (1-68)||(38842210-38842277)
chr8 (1-114)||(9615523-9615637)
chr8 (1-122)||(27301854-27301976)
chr8 (1-114)||(44887662-44887776)
chr8 (1-70)||(7431266-7431335)
chr8 (1-86)||(29616273-29616358)
chr8 (3-68)||(29917877-29917942)
chr8 (1-85)||(4327066-4327150)
chr8 (1-85)||(25691544-25691628)
chr8 (1-85)||(30464462-30464546)
chr8 (1-68)||(3466330-3466397)
chr8 (5-68)||(36632144-36632207)
chr8 (15-86)||(40645638-40645709)
chr8 (1-97)||(4960168-4960265)
chr8 (3-115)||(17523804-17523917)
chr8 (3-68)||(20671303-20671368)
chr8 (1-70)||(25256480-25256549)
chr8 (1-54)||(44039886-44039939)
chr8 (3-114)||(1156527-1156639)
chr8 (3-67)||(1645355-1645419)
chr8 (1-85)||(14378633-14378717)
chr8 (1-85)||(25009174-25009258)
chr8 (3-86)||(8496835-8496918)
chr8 (1-68)||(14511887-14511954)
chr8 (1-68)||(43184726-43184793)
chr8 (1-98)||(20167593-20167691)
chr8 (1-63)||(30653412-30653474)
chr8 (1-46)||(5777501-5777546)
chr8 (1-62)||(8058971-8059032)
chr8 (1-54)||(15870236-15870289)
chr8 (1-46)||(23437760-23437805)
chr8 (1-54)||(42150097-42150150)
chr8 (1-98)||(11756792-11756892)
chr8 (15-87)||(11988739-11988811)
chr8 (1-108)||(16345184-16345291)
chr8 (1-85)||(21132875-21132959)
chr8 (3-87)||(37094160-37094244)
chr8 (15-97)||(9420714-9420797)
chr8 (32-110)||(10658155-10658234)
chr8 (1-115)||(13138131-13138246)
chr8 (1-68)||(23547115-23547182)
chr8 (1-68)||(29708608-29708675)
chr8 (1-56)||(38036805-38036860)
chr8 (1-56)||(42786045-42786100)
chr8 (1-70)||(18809423-18809492)
chr8 (17-70)||(29360899-29360952)
chr8 (1-70)||(31127850-31127919)
chr8 (1-54)||(32909116-32909169)
chr8 (3-115)||(40035286-40035399)
chr8 (1-54)||(44871393-44871445)
chr8 (1-46)||(44947086-44947131)
chr8 (6-46)||(9459244-9459284)
chr8 (15-67)||(20671204-20671256)
[»] chr4 (45 HSPs)
chr4 (2-114)||(36662649-36662760)
chr4 (4-114)||(3708253-3708364)
chr4 (1-118)||(53987729-53987847)
chr4 (1-121)||(33394070-33394191)
chr4 (1-85)||(8525365-8525449)
chr4 (1-116)||(31152659-31152775)
chr4 (1-69)||(38715607-38715674)
chr4 (1-115)||(29844273-29844388)
chr4 (1-103)||(50684931-50685034)
chr4 (1-114)||(18881306-18881420)
chr4 (1-86)||(37164045-37164130)
chr4 (1-85)||(39170988-39171072)
chr4 (1-116)||(42185272-42185388)
chr4 (1-85)||(43447195-43447279)
chr4 (1-85)||(55631824-55631908)
chr4 (1-68)||(28914415-28914482)
chr4 (1-65)||(43047437-43047501)
chr4 (15-86)||(48336393-48336462)
chr4 (15-114)||(48336642-48336742)
chr4 (1-68)||(1613167-1613234)
chr4 (1-68)||(4271963-4272030)
chr4 (15-70)||(35755228-35755283)
chr4 (1-68)||(39195537-39195604)
chr4 (1-68)||(39260399-39260466)
chr4 (1-68)||(46608260-46608327)
chr4 (1-68)||(47834093-47834160)
chr4 (1-71)||(27976614-27976684)
chr4 (1-98)||(51736970-51737068)
chr4 (1-85)||(10384878-10384962)
chr4 (3-87)||(23605853-23605937)
chr4 (3-118)||(31657307-31657423)
chr4 (1-68)||(13848921-13848988)
chr4 (17-70)||(10181150-10181203)
chr4 (1-54)||(11260763-11260816)
chr4 (1-46)||(14958146-14958191)
chr4 (1-86)||(29821079-29821164)
chr4 (1-85)||(40411557-40411642)
chr4 (29-62)||(42154870-42154903)
chr4 (15-68)||(48380520-48380573)
chr4 (1-70)||(50033167-50033236)
chr4 (3-87)||(6520463-6520547)
chr4 (1-69)||(19525760-19525828)
chr4 (1-85)||(37667723-37667807)
chr4 (31-87)||(39194089-39194145)
chr4 (1-85)||(39332779-39332863)
[»] chr3 (62 HSPs)
chr3 (1-87)||(53274940-53275026)
chr3 (1-120)||(901033-901153)
chr3 (3-114)||(23631539-23631651)
chr3 (1-114)||(28228993-28229104)
chr3 (1-85)||(34669638-34669722)
chr3 (1-114)||(4229133-4229247)
chr3 (1-114)||(29720395-29720509)
chr3 (1-118)||(29793323-29793441)
chr3 (2-114)||(37166481-37166595)
chr3 (1-117)||(9484593-9484710)
chr3 (1-70)||(21271897-21271966)
chr3 (1-85)||(12948070-12948154)
chr3 (1-85)||(16434802-16434886)
chr3 (1-85)||(29455653-29455737)
chr3 (1-85)||(42098572-42098656)
chr3 (1-85)||(49076371-49076455)
chr3 (1-61)||(54684613-54684673)
chr3 (1-103)||(10819388-10819491)
chr3 (1-68)||(34263649-34263716)
chr3 (1-68)||(34555198-34555265)
chr3 (1-98)||(28958944-28959042)
chr3 (3-57)||(38878425-38878479)
chr3 (1-114)||(48927747-48927861)
chr3 (6-103)||(50888356-50888454)
chr3 (1-98)||(52094039-52094137)
chr3 (2-118)||(2643215-2643332)
chr3 (1-54)||(18013415-18013468)
chr3 (1-54)||(36179081-36179134)
chr3 (3-68)||(36364710-36364775)
chr3 (1-54)||(47340029-47340082)
chr3 (1-113)||(53055570-53055683)
chr3 (3-114)||(4945798-4945910)
chr3 (1-68)||(36594363-36594431)
chr3 (1-85)||(46866373-46866457)
chr3 (15-114)||(47069406-47069506)
chr3 (1-85)||(50673707-50673791)
chr3 (3-117)||(29809342-29809457)
chr3 (5-68)||(32961293-32961356)
chr3 (1-115)||(35717854-35717969)
chr3 (1-114)||(4464881-4464995)
chr3 (1-87)||(43370319-43370405)
chr3 (1-63)||(43394503-43394565)
chr3 (3-68)||(26759526-26759591)
chr3 (1-70)||(42247157-42247226)
chr3 (1-70)||(48143910-48143979)
chr3 (1-46)||(48690200-48690245)
chr3 (6-70)||(935076-935140)
chr3 (3-118)||(1778357-1778473)
chr3 (1-114)||(5029988-5030104)
chr3 (1-56)||(20144867-20144922)
chr3 (15-70)||(21489963-21490018)
chr3 (32-71)||(45093897-45093936)
chr3 (7-65)||(1325498-1325556)
chr3 (1-98)||(15503170-15503268)
chr3 (1-114)||(32951136-32951250)
chr3 (1-70)||(35322346-35322416)
chr3 (1-46)||(18971496-18971541)
chr3 (1-62)||(31787134-31787194)
chr3 (15-68)||(38833924-38833977)
chr3 (1-54)||(54673925-54673978)
chr3 (2-70)||(20080942-20081009)
chr3 (3-98)||(49818773-49818869)
[»] chr7 (44 HSPs)
chr7 (15-119)||(7314309-7314414)
chr7 (3-114)||(23734169-23734282)
chr7 (1-88)||(7461006-7461093)
chr7 (1-68)||(40348554-40348621)
chr7 (1-87)||(36404876-36404962)
chr7 (1-86)||(31496595-31496680)
chr7 (1-85)||(16807096-16807180)
chr7 (1-53)||(26190315-26190367)
chr7 (1-85)||(38069081-38069165)
chr7 (1-85)||(40231958-40232042)
chr7 (1-68)||(9173286-9173353)
chr7 (1-86)||(28016144-28016229)
chr7 (10-114)||(42493517-42493622)
chr7 (1-61)||(5887894-5887954)
chr7 (1-68)||(33376822-33376889)
chr7 (1-68)||(38850749-38850816)
chr7 (3-86)||(47713384-47713467)
chr7 (1-114)||(25273967-25274081)
chr7 (1-114)||(30462171-30462285)
chr7 (1-114)||(37100976-37101090)
chr7 (1-98)||(44389302-44389400)
chr7 (1-70)||(3680393-3680462)
chr7 (1-54)||(5842178-5842231)
chr7 (1-54)||(9821233-9821286)
chr7 (1-54)||(10723158-10723211)
chr7 (1-46)||(26651159-26651204)
chr7 (1-50)||(32222615-32222664)
chr7 (1-46)||(35265771-35265816)
chr7 (1-46)||(38198628-38198673)
chr7 (1-46)||(38353548-38353593)
chr7 (3-71)||(27248797-27248865)
chr7 (1-85)||(35693780-35693864)
chr7 (1-68)||(4033435-4033502)
chr7 (1-68)||(29247674-29247741)
chr7 (1-60)||(38498764-38498823)
chr7 (1-114)||(41007906-41008020)
chr7 (1-68)||(48448565-48448632)
chr7 (1-47)||(4088786-4088832)
chr7 (1-71)||(23348400-23348470)
chr7 (1-71)||(39982161-39982231)
chr7 (1-70)||(10464160-10464229)
chr7 (1-70)||(18795185-18795254)
chr7 (3-56)||(19327374-19327427)
chr7 (1-97)||(40818647-40818744)
[»] chr6 (29 HSPs)
chr6 (1-116)||(9022838-9022954)
chr6 (1-85)||(2141598-2141682)
chr6 (1-85)||(6142461-6142545)
chr6 (1-85)||(29514980-29515064)
chr6 (3-114)||(31708893-31709005)
chr6 (1-68)||(16661556-16661623)
chr6 (1-118)||(24798500-24798618)
chr6 (1-116)||(4890080-4890196)
chr6 (1-85)||(17417668-17417752)
chr6 (1-85)||(24825195-24825279)
chr6 (1-85)||(32541431-32541515)
chr6 (1-68)||(30699308-30699375)
chr6 (1-62)||(16120828-16120889)
chr6 (1-58)||(24693195-24693252)
chr6 (1-85)||(2397800-2397884)
chr6 (1-85)||(2656624-2656708)
chr6 (1-85)||(6188610-6188694)
chr6 (1-68)||(10105858-10105925)
chr6 (1-114)||(2667279-2667393)
chr6 (1-46)||(995632-995677)
chr6 (1-97)||(17179352-17179447)
chr6 (10-114)||(17496281-17496386)
chr6 (1-97)||(32673765-32673862)
chr6 (1-68)||(2912944-2913011)
chr6 (1-60)||(12869368-12869427)
chr6 (1-114)||(29795451-29795564)
chr6 (29-70)||(3686951-3686992)
chr6 (1-46)||(28483107-28483151)
chr6 (6-62)||(2555295-2555351)
[»] chr1 (51 HSPs)
chr1 (3-117)||(8048704-8048819)
chr1 (1-70)||(2612029-2612098)
chr1 (1-108)||(27462746-27462852)
chr1 (5-98)||(48312045-48312138)
chr1 (1-85)||(10100467-10100551)
chr1 (1-65)||(52749331-52749395)
chr1 (1-64)||(2138983-2139046)
chr1 (1-115)||(38737377-38737492)
chr1 (1-68)||(43453119-43453186)
chr1 (1-68)||(44741390-44741457)
chr1 (3-70)||(48896964-48897031)
chr1 (1-68)||(49903639-49903706)
chr1 (1-70)||(51924924-51924994)
chr1 (1-117)||(1821582-1821699)
chr1 (3-68)||(23337854-23337919)
chr1 (2-114)||(31932133-31932246)
chr1 (1-62)||(31971440-31971501)
chr1 (1-86)||(38786900-38786985)
chr1 (1-85)||(6017403-6017487)
chr1 (1-85)||(10124139-10124223)
chr1 (1-85)||(26543898-26543982)
chr1 (1-85)||(32968143-32968227)
chr1 (1-85)||(45299348-45299432)
chr1 (1-98)||(52688546-52688645)
chr1 (1-68)||(7075284-7075351)
chr1 (1-68)||(44963626-44963693)
chr1 (1-63)||(32495191-32495253)
chr1 (1-46)||(5606345-5606390)
chr1 (1-46)||(5945834-5945879)
chr1 (17-97)||(27581039-27581120)
chr1 (1-70)||(27990760-27990829)
chr1 (1-46)||(31651855-31651900)
chr1 (1-54)||(36035747-36035800)
chr1 (4-57)||(47912339-47912392)
chr1 (7-114)||(41414203-41414311)
chr1 (3-87)||(41855677-41855761)
chr1 (3-87)||(48389094-48389178)
chr1 (1-96)||(50014515-50014611)
chr1 (1-68)||(44452242-44452309)
chr1 (1-68)||(50295890-50295957)
chr1 (1-68)||(40058921-40058990)
chr1 (1-46)||(3277633-3277678)
chr1 (1-70)||(3529323-3529392)
chr1 (1-46)||(3555273-3555318)
chr1 (1-46)||(4489130-4489175)
chr1 (1-70)||(26441781-26441850)
chr1 (1-46)||(33526116-33526161)
chr1 (1-62)||(38644162-38644223)
chr1 (3-68)||(40883458-40883523)
chr1 (3-68)||(44240566-44240631)
chr1 (18-62)||(15443412-15443456)
[»] scaffold0500 (1 HSPs)
scaffold0500 (1-86)||(625-710)
[»] scaffold0687 (1 HSPs)
scaffold0687 (1-68)||(1036-1103)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-85)||(5406-5490)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-85)||(183996-184080)
[»] scaffold0069 (1 HSPs)
scaffold0069 (5-114)||(4441-4551)
[»] scaffold0204 (2 HSPs)
scaffold0204 (15-86)||(23915-23984)
scaffold0204 (15-114)||(24164-24264)
[»] scaffold0283 (1 HSPs)
scaffold0283 (1-46)||(3064-3109)
[»] scaffold0281 (1 HSPs)
scaffold0281 (3-68)||(13151-13216)


Alignment Details
Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 26077646 - 26077791
Alignment:
Q  92 tctattgtaggaaggagggagtaataattaaaataactaaataatttaaacttatannnnnnnnagatgaattaagagtcagaaagacatcaaggagaac 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |        ||||||||||| |||||||||||||||||||||||     
T  26077646 tctattgtaggaaggagggagtaataattaaaataactaaataatttaaacttaaattttttttagatgaattaaaagtcagaaagacatcaaggagaat 26077745  T
Q  192 attagatatcccgactagatcggcacctttaagaaaccttcatcct 237  Q
     ||||| || |||||||  ||| ||||||||| |||||||||||||    
T  26077746 tttagacattccgactaagtcgacacctttaaaaaaccttcatcct 26077791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 40080095 - 40079979
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| |||||||||||   |||||||||||||||||| | ||||| || ||||||| || || | | |||||||||||  |||||||||||    
T  40080095 acatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagttaggttaaaattgtaaattttcaaataggtcatctattgt 40079996  T
Q  100 aggaaggagggagtaat 116  Q
    |||| ||||||||||||    
T  40079995 aggacggagggagtaat 40079979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14057822 - 14057738
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||| ||||||| || |||||||||| || | |||||||||||    
T  14057822 acatcttatatgatattatttatctttgtatattaatagaaaaatatgatcaaagtaagttaggtcaaaattgcatattttcaaa 14057738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 19344649 - 19344733
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | |||||||| |||||||||| || | | |||||||||    
T  19344649 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaa 19344733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 30721635 - 30721750
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||| | |||||||| |||||||||| || | | |||||||||||  |||| |||||     
T  30721635 acatcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaatatgtcatttattgc 30721734  T
Q  100 aggaaggagggagtaa 115  Q
     ||| |||||||||||    
T  30721735 gggatggagggagtaa 30721750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9936838 - 9936956
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||||||  |||| |||| || | | ||||| ||||| ||||| |||||     
T  9936838 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataaattagatcaaaattgcacatttttaaatatatcatttattgc 9936937  T
Q  100 aggaaggagggagtaataa 118  Q
     ||| ||||||||||||||    
T  9936938 gggacggagggagtaataa 9936956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 14633121 - 14633007
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||| ||||||||||| | ||||| || |||||||||| || | | ||||||||| | ||||| |||||     
T  14633121 acatcttatatgatattatttatctttgtatatttgtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgc 14633022  T
Q  100 aggaaggagggagta 114  Q
    |||| ||||||||||    
T  14633021 aggacggagggagta 14633007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 33402542 - 33402608
Alignment:
Q  2 catcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||| ||||||||||||  |||||||||||||||||| ||||||| || ||||||||||    
T  33402542 catcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaa 33402608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1098289 - 1098205
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  1098289 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 1098205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13548327 - 13548243
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  13548327 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 13548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20022974 - 20022890
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  20022974 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 20022890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20040365 - 20040449
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  20040365 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 20040449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 27675652 - 27675540
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataa-tcatctattgtag 101  Q
    ||||||||||| |||||||||||   |||||||||||||||||| ||||||| || | |||||||| || | | |||||||||||| |||| |||||  |    
T  27675652 atcttatatgatattatttatctatgtatattagtagaaaaatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataagtcatttattgcgg 27675553  T
Q  102 gaaggagggagta 114  Q
    || ||||||||||    
T  27675552 gacggagggagta 27675540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41263079 - 41263146
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  41263079 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 41263146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 5985051 - 5984998
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaat 56  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||| |||||||    
T  5985051 atcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaaat 5984998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1781095 - 1781179
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| ||  ||||||||| || | | |||||||||    
T  1781095 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaacttaggtcaaaattgcacattttcaaa 1781179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2551577 - 2551644
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| | ||||||||||||  |||||||||||||||||| | | |||||| ||||||||||    
T  2551577 acatcttatataatattatttatctttatatattagtagaaaaatatggttaaaataagttaggtcaa 2551644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30211691 - 30211758
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||| ||||    
T  30211691 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaa 30211758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 32473974 - 32474033
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtta 62  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| | |||||||| ||||    
T  32473974 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagtta 32474033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27477688 - 27477749
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtta 62  Q
    |||| |||||||| ||||||||||||  |||||||||| ||||||||| ||||| |||||||    
T  27477688 acatattatatgatattatttatctttgtatattagtaaaaaaatacggtcaaagtatgtta 27477749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28143042 - 28142997
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  28143042 acatcttatatgatattatttatctttgtatattagtagaaaaata 28142997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40316932 - 40316887
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  40316932 acatcttatatgatattatttatctttgtatattagtagaaaaata 40316887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 40797024 - 40797089
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||  |||||||||||  ||||||||| |||||||||||||||| |  ||||||||||    
T  40797024 atcttatatgatgttatttatctttgtatattagttgaaaaatacgatcaaagttagttaggtcaa 40797089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41410609 - 41410654
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  41410609 acatcttatatgatattatttatctttgtatattagtagaaaaata 41410654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 8627247 - 8627163
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||| ||||||||||||||  |||||||||| ||||||| | ||||| || ||||| |||| || | | |||||||||||    
T  8627247 atcttatataacattatttatctttgtatattagtaaaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaata 8627163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14607507 - 14607591
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| |||| |||||||  |||||||||||||||||| | ||||| ||  ||||||||| || | | |||||||||    
T  14607507 acatcttatatgatattacttatctttgtatattagtagaaaaatatggtcaaattaaattaggtcaaaattgcacattttcaaa 14607591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 31191127 - 31191211
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||| | ||||| ||  ||||||||| || | | |||||||||    
T  31191127 acatcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaa 31191211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1831178 - 1831111
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||||   ||||||||||  ||||||||| |||||||||| |||||||  ||||||||||    
T  1831178 acatcttatatgatgctatttatctttgtatattagttgaaaaatacggtcaaaatcagttaggtcaa 1831111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14639665 - 14639732
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| ||||| |  ||||||||||    
T  14639665 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagttagttaggtcaa 14639732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20502998 - 20503065
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||| ||||||||||| | || || || ||||||||||    
T  20502998 acatcttatatgatattatttatctttgtatattggtagaaaaatatggtctaagtaagttaggtcaa 20503065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30788319 - 30788252
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||| || ||||||||||||  |||||||||||||||||| | ||||| || |||| |||||    
T  30788319 acatcttatacgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttatgtcaa 30788252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35641883 - 35641824
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgt 60  Q
    |||| |||||||| ||||||||||||  |||||||||||||||||| | ||||| |||||    
T  35641883 acattttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtatgt 35641824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 39104231 - 39104274
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||    
T  39104231 atcttatatgatattatttatctttgtatattagtagaaaaata 39104274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40316645 - 40316578
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||||   ||||||||||  ||||||||| |||||||||| |||||||  ||||||||||    
T  40316645 acatcttatatgatgctatttatctttgtatattagttgaaaaatacggtcaaaatcagttaggtcaa 40316578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2864101 - 2864187
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||| | | ||| ||||||| |||||||  | ||||| |||||||    
T  2864101 acatcttatatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaataatgtatattatcaaata 2864187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6734895 - 6734853
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaa 43  Q
    ||||||||||||| ||||||||||||  |||||||||||||||    
T  6734895 acatcttatatgatattatttatctttatatattagtagaaaa 6734853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34169943 - 34169845
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattg 98  Q
    ||||||||||||| |||||||||||   |||||||||||||||||| | ||||| ||   ||| |||| || | | ||||||||||| |||||||||||    
T  34169943 acatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaaactagatcaaaattgcaaattttcaaatagatcatctattg 34169845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1831465 - 1831420
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||| ||||||  ||||||||||||||||||    
T  1831465 acatcttatatgatattatatatctttgtatattagtagaaaaata 1831420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4299947 - 4299878
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||| | ||||| ||| ||| |||||||    
T  4299947 acatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaata 4299878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 14355612 - 14355519
Alignment:
Q  2 catcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataatcatcta 95  Q
    |||||||||||| ||||||||| ||  ||||||||||||||||||   |||| |||  ||||||||| ||   | ||||| |||||||||||||    
T  14355612 catcttatatgatattatttatttttatatattagtagaaaaatatagtcaagataaattaggtcaaaattacacatttttaaataatcatcta 14355519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 25773384 - 25773425
Alignment:
Q  29 tatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||||||||||||| | ||||| |||||||||||||||    
T  25773384 tatattagtagaaaaatatggtcaaagtatgttaggtcaata 25773425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27674331 - 27674278
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  ||||||| |  |||||||||||||||    
T  27674331 acatcttatatgatattatttatctttgtatattaattaaaaaatacgatcaaa 27674278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 30352023 - 30352088
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||  |||||||||||  ||||||||| |||||||||| ||||| |  ||||||||||    
T  30352023 atcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaa 30352088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39035674 - 39035618
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaata 57  Q
    ||||||||||| | ||||||||||||  ||||||||||||| |||| ||| ||||||    
T  39035674 acatcttatattatattatttatctttgtatattagtagaataatatgattaaaata 39035618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15771031 - 15771118
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataa 88  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||||||||||| ||||||  | | ||||||||||||    
T  15771031 acatcttatatgatattatttatctttatatattaatagaaaaatacgatcaaaatatgttagatcaatagtgcacattttcaaataa 15771118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18734039 - 18733969
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatat 71  Q
    |||||||| |||| ||| ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  18734039 acatcttacatgaaattttttatcttcgtatattagtagaaaaatacaatcaaaatatgttaagtcaatat 18733969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5096362 - 5096278
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| |||||||||| |||| ||||| || | | |||||||||    
T  5096362 acatcttatatgatattatttatctttatatattagtagaaaaatatgatcaaaataagttatgtcaaaattgtacattttcaaa 5096278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10333527 - 10333594
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | |||||||| ||||||||||    
T  10333527 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaa 10333594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 25762308 - 25762193
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||| | || || ||| |||||||||||  | | ||||||||| | |||||||||| |    
T  25762308 acatcttatatgatattatttatctttgtatattaatagaaaaatagggtcgaagtatattaggtcaatagtgcacattttcaaacagatcatctattat 25762209  T
Q  100 aggaaggagggagtaa 115  Q
    |||| |||||||||||    
T  25762208 aggacggagggagtaa 25762193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7724560 - 7724644
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  7724560 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 7724644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8373548 - 8373464
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  8373548 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 8373464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12209103 - 12209019
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  12209103 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 12209019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38963909 - 38963825
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  38963909 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 38963825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 40471850 - 40471766
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| |||||||||| |||| ||||| || | | |||||||||    
T  40471850 acatcttatatgatattatttatctttgtatattagtaaaaaaatatgatcaaaataagttaagtcaaaattgcacattttcaaa 40471766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5030398 - 5030339
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgt 60  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||||||||||| |||||    
T  5030398 acatcttatatgatattatttatctttgtatattagtataaaaatacgatcaaagtatgt 5030339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16127729 - 16127796
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  ||||||||| |||||||| ||||||| || ||||||||||    
T  16127729 acatcttatatgatattatttatctttgtatattagtggaaaaatatgatcaaagtaagttaggtcaa 16127796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41436946 - 41436879
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  41436946 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 41436879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4137523 - 4137470
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| |||||||    
T  4137523 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaa 4137470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8896385 - 8896300
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||| ||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | ||||||||||    
T  8896385 acatcttatgtgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaat 8896300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11383994 - 11384055
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtta 62  Q
    |||||||| |||| ||||||||||||  |||||||||||||||||| |||||||||| ||||    
T  11383994 acatcttacatgatattatttatctttatatattagtagaaaaatatgatcaaaataagtta 11384055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16126031 - 16126116
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||| ||||||||||||  ||||||||| |||||||| | ||||| || |||||||||| || | | ||||||||||    
T  16126031 acatcttatatgatattatttatctttgtatattagtggaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaat 16126116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 18504586 - 18504489
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataa-tcatctatt 97  Q
    ||||||||||||| |||||| |||||  |||||||||||||||||| | |||||||| |||| ||||| ||   | |||||||||||| |||||||||    
T  18504586 acatcttatatgatattattgatctttgtatattagtagaaaaatatggtcaaaataagttacgtcaaaattacacattttcaaataagtcatctatt 18504489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 25277884 - 25277941
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgt 60  Q
    ||||||||||| ||||||||||||  |||||||||| |||||||||||||||| ||||    
T  25277884 atcttatatgatattatttatctttgtatattagtataaaaatacgatcaaaacatgt 25277941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 3037874 - 3037929
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||  |||||||||| ||||||  |||||||||||||||||||||||    
T  3037874 attatttatctttgtatattagtaaaaaaatgtgatcaaaatatgttaggtcaata 3037929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5861514 - 5861597
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaa 84  Q
    ||||||||||||| ||||||||| |   ||||||||| |||||||||| |||||  ||||||||||||||  | ||||||||||    
T  5861514 acatcttatatgatattatttatttgtgtatattagtggaaaaatacggtcaaagcatgttaggtcaatagtgcatattttcaa 5861597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7601346 - 7601401
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaat 56  Q
    |||||||||||||  |||||||||||  ||||||||| ||||||||||||||||||    
T  7601346 acatcttatatgatgttatttatctttgtatattagttgaaaaatacgatcaaaat 7601401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41575676 - 41575590
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||||| ||||||||| |   |||||||||||||||||| ||||||| || | |||||||| || | | |||||||||||    
T  41575676 acatcttatatgatattatttatatatgtatattagtagaaaaatatgatcaaagtaagctaggtcaaaattgcaaattttcaaata 41575590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43925188 - 43925102
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    |||||||| |||| ||||||||||||  |  ||||||||||||||| ||||||| ||||||| |||||||  | ||||| |||||||    
T  43925188 acatcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaataatgtatattatcaaata 43925102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16333594 - 16333509
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||| ||||||||||||  ||||| ||| |||||||| | ||||| || |||||||||| || | | ||||||||||    
T  16333594 acatcttatatgatattatttatctttgtatatcagtggaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaat 16333509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 37806894 - 37806829
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||| | ||||||||||||  |||||||||||||||||| | | ||||||||| |||||||    
T  37806894 atcttatataatattatttatctttgtatattagtagaaaaatatggttaaaatatgtcaggtcaa 37806829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37987885 - 37987938
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| |||||||    
T  37987885 acatcttatatgatattatttatctttgtatattagtaaaaaaatatgatcaaa 37987938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45036477 - 45036432
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  45036477 acatcttatatgatattatttatctttgtatattagtagaaaaata 45036432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6075239 - 6075155
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||| ||||||||||||||||||||  ||||||| |||||||||| | ||||| || ||||  |||| || ||| |||||||||    
T  6075239 acatcgtatatgacattatttatctttgtatattaatagaaaaatatggtcaaagtaagttaaatcaaaattgaaaattttcaaa 6075155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 22718494 - 22718578
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | ||||| || | |||||||| || | | |||||||||||    
T  22718494 atcttatatgatattatttatctatatatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaata 22718578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 33046199 - 33046255
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatat 71  Q
    ||||||||||||  ||||||||||||||||||  ||||||||||| ||||| |||||    
T  33046199 attatttatctttgtatattagtagaaaaatataatcaaaatatgctaggttaatat 33046255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1749121 - 1749188
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| ||||| |  ||||||||||    
T  1749121 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaa 1749188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2831821 - 2831754
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||| |||| ||||||||| ||  |||||||||||||||||| | ||||| || ||||||||||    
T  2831821 acatcttacatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 2831754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 25766558 - 25766443
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  ||||||| || ||||||| | || || ||| |||||||||||  | | ||||||||| | ||||||||||      
T  25766558 acatcttatatgatattatttatctttgtatattaataaaaaaatatggtcgaagtatattaggtcaatagtgcacattttcaaacagatcatctattac 25766459  T
Q  100 aggaaggagggagtaa 115  Q
    |||| ||| |||||||    
T  25766458 aggacggaaggagtaa 25766443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2543950 - 2543864
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||||| ||||||||| ||  ||||||  || ||||||| | ||||||||| |||| ||||||  | |||||||||||||    
T  2543950 acatcttatatgatattatttatttttgtatatttatataaaaatatggtcaaaatatattagatcaataatgtatattttcaaata 2543864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 27909597 - 27909539
Alignment:
Q  158 atgaattaagagtcagaaagacatcaaggagaacattagatatcccgactagatcggca 216  Q
    ||||| ||||||  |||||||||||||||||||  ||||| ||||||||||| ||||||    
T  27909597 atgaactaagagggagaaagacatcaaggagaagcttagacatcccgactaggtcggca 27909539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 31603367 - 31603449
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||| ||||||||| ||  ||||||||||||||||||   ||||| || |||||||||| || | | |||||||||    
T  31603367 atcttatatgatattatttatatttgtatattagtagaaaaatattgtcaaagtaagttaggtcaaaattgcacattttcaaa 31603449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9273467 - 9273414
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| |||||    
T  9273467 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaa 9273414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15177483 - 15177438
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  |||||||||| |||||||    
T  15177483 acatcttatatgatattatttatctttgtatattagtataaaaata 15177438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20917876 - 20917929
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| |||||    
T  20917876 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaa 20917929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30708875 - 30708932
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatat 58  Q
    |||||||| |||| ||||||||||||  || ||||||||||||||| | |||||||||    
T  30708875 acatcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatat 30708932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 43328752 - 43328817
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||| | ||||||||||||  |||||||||||||||||| | ||||| || ||||| ||||    
T  43328752 atcttatataatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaa 43328817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 42038670 - 42038790
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |  |||||||||||| || | ||||| ||||| | |||||||  | ||||| |||| | |||||| ||||      
T  42038670 acatcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgaatcatttattaa 42038769  T
Q  100 aggaaggagggagtaataatt 120  Q
     ||| ||||||||||||||||    
T  42038770 gggacggagggagtaataatt 42038790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13888577 - 13888691
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||| ||||| |||||||  ||||||  | | |||||||||||  | |||||||||    
T  13888577 acatcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaagtatgttaaatcaatagcgcacattttcaaataggttatctattgt 13888676  T
Q  100 aggaaggagggagta 114  Q
    |||| ||||||||||    
T  13888677 aggacggagggagta 13888691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7603421 - 7603354
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||||| ||||||||||| |||||||    
T  7603421 acatcttatatgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaa 7603354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25118900 - 25118833
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||| | | |||||||||||||||||||    
T  25118900 acatcttatatgatattatttatctttgtatattagtagaaaaagaaggtcaaaatatgttaggtcaa 25118833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 35584123 - 35584190
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||| ||||||||||||  ||||||| |||||||||| ||||||||||| |||||||||||    
T  35584123 atcttatatgatattatttatctttgtatattaatagaaaaatatgatcaaaatatattaggtcaata 35584190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 38842277 - 38842210
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| || ||||||||||    
T  38842277 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaa 38842210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9615637 - 9615523
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||| | ||||||||||||  |||||||||| ||||||||| ||||| |||||||| ||||||    |||||||||||||  |||| ||||||    
T  9615637 acatcttatataatattatttatctttgtatattagtaaaaaaatacggtcaaagtatgttagatcaatagtacatattttcaaataggtcatatattgt 9615538  T
Q  100 aggaaggagggagta 114  Q
    |||| ||| ||||||    
T  9615537 aggacggatggagta 9615523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 27301976 - 27301854
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgt 99  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||   ||||| ||  |||  |||| || |||||||||||||| | ||||||||||     
T  27301976 acatcttatatgatattatttatctttgtatattagtagaaaaatattgtcaaagtaaattatatcaaaattgaatattttcaaatgagtcatctattgc 27301877  T
Q  100 aggaaggagggagtaataattaa 122  Q
    | || ||||||||||||| ||||    
T  27301876 aagacggagggagtaatacttaa 27301854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44887662 - 44887776
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || || ||||||| || | | ||||||||||| ||||| |||||     
T  44887662 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagtcaggtcaaaattgcacattttcaaatagatcatttattgc 44887761  T
Q  100 aggaaggagggagta 114  Q
     ||| ||||||||||    
T  44887762 gggacggagggagta 44887776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7431266 - 7431335
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||  | |||||||||||||| ||||||    
T  7431266 acatcttatatgatattatttatctttgtatattagtagaaaaatgtggtcaaaatatgttagatcaata 7431335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29616273 - 29616358
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||| ||||||||||||  |||||||||||| ||||| ||||||| || ||||| |||| ||  |||||||||||||    
T  29616273 acatcttatatgatattatttatctttgtatattagtagacaaatatgatcaaagtaagttagatcaaaatttaatattttcaaat 29616358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 29917877 - 29917942
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| | |||||||| ||||||||||    
T  29917877 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaa 29917942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4327066 - 4327150
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| || ||||| |||| || | | |||||||||    
T  4327066 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttagatcaaaattgcacattttcaaa 4327150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 25691544 - 25691628
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  25691544 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 25691628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 30464546 - 30464462
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  30464546 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 30464462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3466397 - 3466330
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||  |||||| || ||||||||||    
T  3466397 acatcttatatgatattatttatctttgtatattagtagaaaaataaaatcaaagtaagttaggtcaa 3466330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 36632144 - 36632207
Alignment:
Q  5 cttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||| |||||||||||| ||||||||||||||||||| | |||||||| ||||| ||||    
T  36632144 cttatatgatattatttatctttttatattagtagaaaaatatggtcaaaataagttagatcaa 36632207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 40645709 - 40645638
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||  |||||||||||||||||| ||||||| || |||||||||| || ||| ||||||||||    
T  40645709 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgaaaattttcaaat 40645638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4960265 - 4960168
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctatt 97  Q
    ||||||||||||| |||||||||||   |||||||||||||||||| | ||||| || | |||||||| || | | ||||||||||| ||||||||||    
T  4960265 acatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctatt 4960168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 17523917 - 17523804
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgtag 101  Q
    ||||||||||| ||||||||||||  |||||||| ||||||||| ||||||| || ||||||| || |  | | ||||||||||   |||||||||||||    
T  17523917 atcttatatgatattatttatctttgtatattagcagaaaaatatgatcaaagtaagttaggttaaaactgcacattttcaaatgggtcatctattgtag 17523818  T
Q  102 gaaggagggagtaa 115  Q
    || ||||| |||||    
T  17523817 gagggaggaagtaa 17523804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 20671368 - 20671303
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  20671368 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 20671303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25256480 - 25256549
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||| |||| ||||||||||||  || ||||||||||||||| ||||||| ||||||| |||||||    
T  25256480 acatcttacatgatattatttatctttgtaaattagtagaaaaatatgatcaaagtatgttaagtcaata 25256549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44039939 - 44039886
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| |||||||    
T  44039939 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaa 44039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 1156527 - 1156639
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgtag 101  Q
    ||||||||||| ||||||||| ||  ||||| |||||||||||||  ||||| |||||||| ||||||    | ||||| |||| ||||||||||| |||    
T  1156527 atcttatatgatattatttatttttatatatcagtagaaaaatacagtcaaagtatgttagatcaataatataaatttttaaataaatcatctattatag 1156626  T
Q  102 gaaggagggagta 114  Q
    || ||||||||||    
T  1156627 gatggagggagta 1156639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 1645355 - 1645419
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtca 67  Q
    ||||||||||| ||||||||| ||  |||||||||||||||||||| ||||| || |||||||||    
T  1645355 atcttatatgatattatttatttttgtatattagtagaaaaatacggtcaaagtaagttaggtca 1645419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14378633 - 14378717
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||   ||||| || |||||||||| || | | |||||||||    
T  14378633 acatcttatatgatattatttatctttatatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaa 14378717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 25009258 - 25009174
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| ||  ||||||||| || | | |||||||||    
T  25009258 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaa 25009174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 8496835 - 8496918
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||| ||||||||||||  |||||| ||||||||||| | ||||| || |||||||||| || | | ||||||||||    
T  8496835 atcttatatgatattatttatctttgtatattcgtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaat 8496918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14511954 - 14511887
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| |||||||  ||||||||||    
T  14511954 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaaattagttaggtcaa 14511887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43184726 - 43184793
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||| ||  |||||||||||||||||| | ||||| || ||||||||||    
T  43184726 acatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 43184793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 20167691 - 20167593
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattg 98  Q
    |||||||| |||| ||||||||| ||  |  |||||||||||||||  |||||||||||||| |||||||  | ||||| ||||||| |||||||||||    
T  20167691 acatcttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaaatagatcatctattg 20167593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30653474 - 30653412
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttag 63  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||    
T  30653474 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttag 30653412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5777501 - 5777546
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  5777501 acatcttatatgatattatttatctttgtatattagtagaaaaata 5777546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8058971 - 8059032
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtta 62  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| | |||||||| ||||    
T  8058971 acatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagtta 8059032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15870289 - 15870236
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||| ||  |||||||||||||||||| |||||||    
T  15870289 acatcttatatgatattatttatttttgtatattagtagaaaaatatgatcaaa 15870236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23437760 - 23437805
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  23437760 acatcttatatgatattatttatctttgtatattagtagaaaaata 23437805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42150097 - 42150150
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    |||||||||||||  ||||||||||| |||||||||| |||||||||| |||||    
T  42150097 acatcttatatgatgttatttatctttttatattagttgaaaaatacggtcaaa 42150150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11756892 - 11756792
Alignment:
Q  1 acatcttatatgacattatttatct-tct-tatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataa-tcatctatt 97  Q
    ||||||||||||| ||||||||||| | | ||||||||| |||||||| | ||||| || |||||||||| || | | |||||||||||| |||||||||    
T  11756892 acatcttatatgatattatttatctatgtatatattagttgaaaaatatggtcaaagtaagttaggtcaaaattgcaaattttcaaataagtcatctatt 11756793  T
Q  98 g 98  Q
    |    
T  11756792 g 11756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 11988811 - 11988739
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    |||| |||||||  ||||||||||||||| |||| ||||||||||||| |||||||  | | |||||||||||    
T  11988811 attacttatctttgtatattagtagaaaactacggtcaaaatatgttaagtcaataatgtacattttcaaata 11988739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16345291 - 16345184
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  ||||||||||| |  ||||| | ||| ||| ||||||||||||   |||||||||||||  ||| |||||||    
T  16345291 acatcttatatgatattatttatctttatatattagtag-atcatacggttaaagtattttaggtcaatattacatattttcaaataggtcacctattgt 16345193  T
Q  100 aggaaggag 108  Q
    |||| ||||    
T  16345192 aggacggag 16345184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 21132875 - 21132959
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||| ||||  |||||||||||||||||| | ||||| || |||| ||||| || | | |||||||||    
T  21132875 acatcttatatgatattatttttctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaattgcacattttcaaa 21132959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 37094244 - 37094160
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | ||||| || | |||||||| || | | |||||||||||    
T  37094244 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaata 37094160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 9420714 - 9420797
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctatt 97  Q
    ||||||||||||  |||||||||| ||| | | |||||||||||||||| ||||||  | | ||||||||||| ||||||||||    
T  9420714 attatttatctttgtatattagtaaaaacacatgatcaaaatatgttagatcaataatgcacattttcaaatagatcatctatt 9420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 10658155 - 10658234
Alignment:
Q  32 attagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtaggaaggaggg 110  Q
    ||||||||||||||| | ||||| ||||||| |||||||  | ||||| ||||||| ||||||||||| |||| ||||||    
T  10658155 attagtagaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaaatagatcatctattgaaggacggaggg 10658234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 13138246 - 13138131
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    |||||||| |||| ||||||||||||  |  ||||||||||||||| | ||||||||||| | |||||||  | ||||| |||| ||  |||||||||      
T  13138246 acatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgtcaagtcaataatgtatattatcaactaggtcatctattaa 13138147  T
Q  100 aggaaggagggagtaa 115  Q
    |||| |||||||||||    
T  13138146 aggacggagggagtaa 13138131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23547182 - 23547115
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| | ||||||||||||  ||||||||||||||||||  |||||| || ||||| ||||    
T  23547182 acatcttatataatattatttatctttgtatattagtagaaaaatattatcaaagtaagttagatcaa 23547115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29708675 - 29708608
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| ||||| |  ||||||||||    
T  29708675 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaa 29708608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38036805 - 38036860
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaat 56  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| |||||||    
T  38036805 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaaat 38036860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42786045 - 42786100
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaat 56  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||| | |||||||    
T  42786045 acatcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaat 42786100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18809423 - 18809492
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||| | ||||| ||| ||| |||||||    
T  18809423 acatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaata 18809492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 29360899 - 29360952
Alignment:
Q  17 tatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||  |||||||||||||||||||| |||||  ||||||||| ||||    
T  29360899 tatttatctttatatattagtagaaaaatacggtcaaagcatgttaggttaata 29360952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31127919 - 31127850
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||| |||| ||||||||||||  |  ||||||||||||||| ||||||| ||| ||| |||||||    
T  31127919 acatcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatattaagtcaata 31127850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32909169 - 32909116
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| |||||    
T  32909169 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaa 32909116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 40035399 - 40035286
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgtag 101  Q
    ||||||||||| ||||||||| ||  |||||||||||||||||| ||| ||| ||  |||| |||| || | | ||||||||||  ||||||||||| |     
T  40035399 atcttatatgatattatttatttttgtatattagtagaaaaatatgattaaactaaattagatcaaaattgcaaattttcaaatggatcatctattgcat 40035300  T
Q  102 gaaggagggagtaa 115  Q
    || ||| |||||||    
T  40035299 gacggatggagtaa 40035286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44871445 - 44871393
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| |||||||    
T  44871445 acatcttatatgatattatttatctttgtatattagta-aaaaatatgatcaaa 44871393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44947131 - 44947086
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||||||    
T  44947131 acatcttatatgatattatttatcttagtatattaatagaaaaata 44947086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 9459244 - 9459284
Alignment:
Q  6 ttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    |||||||| ||||||||||||  ||||||||||||||||||    
T  9459244 ttatatgatattatttatctttatatattagtagaaaaata 9459284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 20671256 - 20671204
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtca 67  Q
    ||||||||||||  |||||||||| ||||||||  ||||||||||| ||||||    
T  20671256 attatttatctttgtatattagtataaaaatacactcaaaatatgtcaggtca 20671204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 36662649 - 36662760
Alignment:
Q  2 catcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataa-tcatctattgta 100  Q
    |||||||||||| ||||||||||||  |||||||||||||||||| | |  ||||||||||| ||||||  | |||||||||||||| ||||||||||||    
T  36662649 catcttatatgatattatttatctttatatattagtagaaaaataaggt--aaatatgttagatcaatagtgcatattttcaaataagtcatctattgta 36662746  T
Q  101 ggaaggagggagta 114  Q
    ||| |||| |||||    
T  36662747 ggacggagagagta 36662760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 3708364 - 3708253
Alignment:
Q  4 tcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtagg 102  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||||| || |||||||||| || | | ||||||||| | ||||| |||||| ||    
T  3708364 tcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgtggg 3708265  T
Q  103 aaggagggagta 114  Q
    | ||||||||||    
T  3708264 acggagggagta 3708253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 53987729 - 53987847
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||| ||||| | | ||||| ||||  ||||||||||||    
T  53987729 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggttaatattgcacatttttaaatggatcatctattgt 53987828  T
Q  100 aggaaggagggagtaataa 118  Q
    ||||  |||| ||||||||    
T  53987829 aggacagaggaagtaataa 53987847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 33394191 - 33394070
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgt 99  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| | ||||| || |||||||||| || | | ||||| ||||   ||| |||||||    
T  33394191 acatcttatatgagattatttatcttcgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacatttttaaatgggtcacctattgt 33394092  T
Q  100 aggaaggagggagtaataatta 121  Q
     ||| ||||| |||||||||||    
T  33394091 gggacggaggaagtaataatta 33394070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8525365 - 8525449
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||| ||||||| || |||||||||| || | |||||||||||    
T  8525365 acatcttatatgatattatttatccttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcatattttcaaa 8525449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31152775 - 31152659
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | ||||||||| |  |||| ||||||    
T  31152775 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgt 31152676  T
Q  100 aggaaggagggagtaat 116  Q
     ||| ||||||||||||    
T  31152675 gggacggagggagtaat 31152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38715674 - 38715607
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaat 69  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||||| |||||    
T  38715674 acatcttatatgatattatttatcttgt-atattagtagaaaaatacggtcaaaatatgttagatcaat 38715607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 29844273 - 29844388
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||| | ||||||||||||  ||||||| |||||||||||| | ||| ||| |||| ||||||  | ||||||| ||||| ||||||||||||    
T  29844273 acatcttatataatattatttatctttatatattaatagaaaaatacggttaaagtatcttagatcaataatgcatattttgaaatagatcatctattgt 29844372  T
Q  100 aggaaggagggagtaa 115  Q
    | || |||||||||||    
T  29844373 aagacggagggagtaa 29844388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 50685034 - 50684931
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| || ||||| |||| || | ||||||| ||||| || ||||||||     
T  50685034 acatcttatatgatattatttatctttatatattagtagaaaaatatgatcaaagtaagttagatcaaaattgcatatttttaaatagattatctattgg 50684935  T
Q  100 agga 103  Q
    ||||    
T  50684934 agga 50684931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18881306 - 18881420
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||   ||||| ||| ||| |||||||    | |||||||||||  |||||||||||    
T  18881306 acatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtatattaagtcaatagttcacattttcaaataggtcatctattgt 18881405  T
Q  100 aggaaggagggagta 114  Q
    |||| ||||||||||    
T  18881406 aggacggagggagta 18881420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37164130 - 37164045
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||   ||||| || |||||||||| || | ||||||||||||    
T  37164130 acatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgtatattttcaaat 37164045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 39171072 - 39170988
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||| | ||||||||||||  |||||||||||||||||| | |||||||| |||||||||| || | | |||||||||    
T  39171072 acatcttatattatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaa 39170988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42185388 - 42185272
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgt 99  Q
    |||| |||||||| ||||||||||||  |||||||||||||||||| | ||||| ||  ||||||||| || | | ||||||||||  |||||||||||     
T  42185388 acattttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaaattaggtcaaaattgcaaattttcaaatggatcatctattgc 42185289  T
Q  100 aggaaggagggagtaat 116  Q
     ||| ||||||||||||    
T  42185288 gggacggagggagtaat 42185272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 43447279 - 43447195
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  43447279 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 43447195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 55631824 - 55631908
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| | |||||||| |||||||||| || | | |||||||||    
T  55631824 acatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaa 55631908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 28914482 - 28914415
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  28914482 acatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtaagttaggtcaa 28914415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43047501 - 43047437
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggt 65  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||    
T  43047501 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggt 43047437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 48336393 - 48336462
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||  |||||||||||||||||||||||||| || |||||||||| || | | ||||||||||    
T  48336393 attatttatctt--tatattagtagaaaaatacgatcaaagtaagttaggtcaaaattgcacattttcaaat 48336462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 48336642 - 48336742
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtaggaaggagggagt 113  Q
    ||||| ||||||  |||||||||||||||||||| ||||||||||||| |||||||  | | ||||| |||||  ||||||||| || || |||||||||    
T  48336642 attatctatctttgtatattagtagaaaaatacggtcaaaatatgttaagtcaatagtgcacatttttaaataggtcatctattataagacggagggagt 48336741  T
Q  114 a 114  Q
    |    
T  48336742 a 48336742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1613167 - 1613234
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| ||  |||||||||    
T  1613167 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaa 1613234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4271963 - 4272030
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||||  ||||| || ||||||||||    
T  4271963 acatcttatatgatattatttatctttatatattaatagaaaaatacagtcaaagtaagttaggtcaa 4272030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 35755283 - 35755228
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||  |||||||||| ||||||| ||||||||||||| |||||||||    
T  35755283 attatttatctttatatattagtataaaaatatgatcaaaatatgtcaggtcaata 35755228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39195604 - 39195537
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| | ||||| ||||| |||||||    
T  39195604 acatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtatgtcaggtcaa 39195537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39260466 - 39260399
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||   ||||||||  |||||||||    
T  39260466 acatcttatatgatattatttatctttgtatattagtagaaaaatattgtcaaaataaattaggtcaa 39260399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 46608327 - 46608260
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| | ||||| || ||||||||||    
T  46608327 acatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtaagttaggtcaa 46608260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 47834093 - 47834160
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||| |||||    
T  47834093 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttatgtcaa 47834160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27976684 - 27976614
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatat 71  Q
    |||||| |||||| ||||||||||||  ||||||| || ||||||| ||||||||||| |||| |||||||    
T  27976684 acatctaatatgatattatttatctttgtatattaataaaaaaatatgatcaaaatatattagatcaatat 27976614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 51737068 - 51736970
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattg 98  Q
    |||||||| |||| ||||||||||||  |  ||||||||||||||| | ||||||||| ||| |||||||  | ||||| ||||||| |||||||||||    
T  51737068 acatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatattaagtcaataatgtatattgtcaaatagatcatctattg 51736970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 10384962 - 10384878
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||  ||||||||||||  |||||||||||||||||| | | ||| || |||||||||| || | | |||||||||    
T  10384962 acatcttatatgttattatttatctttgtatattagtagaaaaatatggttaaagtaagttaggtcaaaattgcacattttcaaa 10384878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 23605853 - 23605937
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||| |||||||||||   ||| |||||||||||||| ||||||| || | |||||||| || | | |||||||||||    
T  23605853 atcttatatgatattatttatctatgtatgttagtagaaaaatatgatcaaagtaagctaggtcaaaattgtaaattttcaaata 23605937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 31657307 - 31657423
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtag 101  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | ||||| || | |||||||| || | | ||||| |||||  |||| |||||  |    
T  31657307 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgg 31657406  T
Q  102 gaaggagggagtaataa 118  Q
    || ||||||||||||||    
T  31657407 gacggagggagtaataa 31657423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13848988 - 13848921
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| | |||||  ||||||||||    
T  13848988 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggttaaaatcagttaggtcaa 13848921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 10181150 - 10181203
Alignment:
Q  17 tatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||  |||||||||||||||||  | ||||||||||||| |||||||    
T  10181150 tatttatctttgtatattagtagaaaaatgtggtcaaaatatgttaagtcaata 10181203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11260816 - 11260763
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| |||||    
T  11260816 acatcttatatgatgttatttatctttatatattagttgaaaaatacggtcaaa 11260763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14958146 - 14958191
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||| ||  ||||||||||||||||||    
T  14958146 acatcttatatgatattatttatttttgtatattagtagaaaaata 14958191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 29821164 - 29821079
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    |||||| |||||| |||| |||||||  |||||||||||||||||| | ||||| || ||||| |||| || | | ||||||||||    
T  29821164 acatctaatatgaaattacttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaat 29821079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40411557 - 40411642
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagt-agaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  ||||||||| | ||||||| | ||||| || |||||||||| || | | |||||||||    
T  40411557 acatcttatatgatattatttatctttgtatattagtaaaaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 40411642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 42154903 - 42154870
Alignment:
Q  29 tatattagtagaaaaatacgatcaaaatatgtta 62  Q
    |||||||||||||||||| |||||||||||||||    
T  42154903 tatattagtagaaaaatatgatcaaaatatgtta 42154870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 48380573 - 48380520
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  48380573 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 48380520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 50033167 - 50033236
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||| |||| ||||||||||||  |  ||||||||||||||| | ||||| ||||||| |||||||    
T  50033167 acatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaata 50033236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 6520547 - 6520463
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||| |||||||||||   ||||||||||||||||||   ||||| || | |||||||| || | | |||||||||||    
T  6520547 atcttatatgatattatttatctatgtatattagtagaaaaatatagtcaaagtaagctaggtcaaaattgcaaattttcaaata 6520463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19525828 - 19525760
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaat 69  Q
    |||||||| |||| ||||||||||||  |  ||||||||||||||| | ||||| ||||||| ||||||    
T  19525828 acatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaat 19525760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 37667723 - 37667807
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||| ||| ||||||||||||  ||||||| |||||||||| | ||||| ||  ||||||||| || | | |||||||||    
T  37667723 acatcttatttgatattatttatctttgtatattaatagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaa 37667807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 39194089 - 39194145
Alignment:
Q  31 tattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    |||||||||||||||||  ||||| ||||||| |||||||| | ||||| |||||||    
T  39194089 tattagtagaaaaatacagtcaaagtatgttaagtcaatattgtatattgtcaaata 39194145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 39332779 - 39332863
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||  ||  |||||||||||||||||| | ||||| || ||||| |||| || | | |||||||||    
T  39332779 acatcttatatgatattatttacttttgtatattagtagaaaaatatggtcaaagtaagttagttcaaaattgcacattttcaaa 39332863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 53274940 - 53275026
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| |||||||||| |||||||||| || | | |||||||||||    
T  53274940 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaaataagttaggtcaaaattgcacattttcaaata 53275026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 901033 - 901153
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| || |||||||||| || | | ||||||||| | ||||| |||||     
T  901033 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgc 901132  T
Q  100 aggaaggagggagtaataatt 120  Q
     ||| ||||||||||| ||||    
T  901133 gggacggagggagtaaaaatt 901153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 23631539 - 23631651
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtag 101  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||| ||||| |||||||||| ||||    |||||||||||||  | |||||| ||||    
T  23631539 atcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaagtatgttaggttaataatacatattttcaaataggttatctatcgtag 23631638  T
Q  102 gaaggagggagta 114  Q
    || ||||||||||    
T  23631639 gacggagggagta 23631651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28228993 - 28229104
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    |||||||||||||  |||||||||||  ||||||| || ||||||||  |||||||||||||||||||||  ||| |||||||||||  |||||||||||    
T  28228993 acatcttatatga--ttatttatctttgtatattaata-aaaaatacagtcaaaatatgttaggtcaatagtgaacattttcaaataggtcatctattgt 28229089  T
Q  100 aggaaggagggagta 114  Q
    |||| ||||||||||    
T  28229090 aggacggagggagta 28229104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34669722 - 34669638
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| || |||||||||| || | | |||||||||    
T  34669722 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 34669638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4229133 - 4229247
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataa-tcatctattgt 99  Q
    ||||||||||||| |||||||||||   |||||||||| ||||||| ||||||| || | |||||||| || | | |||||||||||| |||| |||||     
T  4229133 acatcttatatgatattatttatctatgtatattagtaaaaaaatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataagtcatttattgc 4229232  T
Q  100 aggaaggagggagta 114  Q
    |||| ||||||||||    
T  4229233 aggatggagggagta 4229247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29720509 - 29720395
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  ||||||||| |||||||| ||||||| || |||||||||| || | | ||||||||| | ||||| |||||     
T  29720509 acatcttatatgatattatttatctttatatattagtggaaaaataggatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgc 29720410  T
Q  100 aggaaggagggagta 114  Q
     ||| ||||||||||    
T  29720409 gggacggagggagta 29720395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29793323 - 29793441
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | ||||||||| |  |||| |||||     
T  29793323 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgc 29793422  T
Q  100 aggaaggagggagtaataa 118  Q
     ||| ||||||||||||||    
T  29793423 gggacggagggagtaataa 29793441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 37166595 - 37166481
Alignment:
Q  2 catcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaata-ttttcaaata-atcatctattgt 99  Q
    |||||||||| | |||||||||||| |||||||||| |||||||||| ||||||||||||  |||||||  | ||| |||| |||||  |||||||||||    
T  37166595 catcttatataatattatttatctttttatattagtggaaaaatacggtcaaaatatgtttcgtcaatagagcatattttttaaataggtcatctattgt 37166496  T
Q  100 aggaaggagggagta 114  Q
    |||| |||| |||||    
T  37166495 aggacggagagagta 37166481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9484710 - 9484593
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | ||||||||| |  |||| |||||     
T  9484710 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgc 9484611  T
Q  100 aggaaggagggagtaata 117  Q
     ||| |||||||||||||    
T  9484610 gggacggagggagtaata 9484593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21271966 - 21271897
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||| | ||||||||||| |||||||||| || |||||||||||| ||||||| |||||||    
T  21271966 acatcttatatgataatatttatcttcgtatattagtataacaatacgatcaaagtatgttaagtcaata 21271897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12948154 - 12948070
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  12948154 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 12948070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16434802 - 16434886
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| | |||||||| |||||||||| || | | |||||||||    
T  16434802 acatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaa 16434886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29455653 - 29455737
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  29455653 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 29455737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 42098572 - 42098656
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  42098572 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 42098656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 49076371 - 49076455
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  49076371 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 49076455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54684613 - 54684673
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtt 61  Q
    ||||||||||| | ||||||||||||  |||||||||||||||||||| ||||||||||||    
T  54684613 acatcttatataatattatttatctttgtatattagtagaaaaatacggtcaaaatatgtt 54684673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 10819388 - 10819491
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| |||||||||||   |||||||||||||||||||   |||| |||||||||| ||||  | |||||||||||||  |||||| ||||    
T  10819388 acatcttatatgatattatttatctgtgtatattagtagaaaaatactgccaaagtatgttaggtaaatagtgcatattttcaaataggtcatctcttgt 10819487  T
Q  100 agga 103  Q
    ||||    
T  10819488 agga 10819491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34263649 - 34263716
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  34263649 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 34263716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34555265 - 34555198
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  34555265 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 34555198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 28958944 - 28959042
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattg 98  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || | |||||||| || | | ||||| ||||| |||||||||||    
T  28958944 acatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaatttttaaatagatcatctattg 28959042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 38878425 - 38878479
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaata 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| | ||||||||    
T  38878425 atcttatatgatattatttatctttttatattagtagaaaaatatggtcaaaata 38878479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 48927747 - 48927861
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||| || || | | ||||||||| | ||||| |||||     
T  48927747 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtaaaaattgcacattttcaaacagatcatttattgc 48927846  T
Q  100 aggaaggagggagta 114  Q
     ||| ||||||||||    
T  48927847 gggacggagggagta 48927861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 50888454 - 50888356
Alignment:
Q  6 ttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtagga 103  Q
    |||||||| ||||||||||||  |||||||| |||||||||   ||||| |||||| ||||||||  | ||||||||||||| ||||||||||| ||||    
T  50888454 ttatatgatattatttatctttgtatattagcagaaaaatatagtcaaattatgtttggtcaatagtgcatattttcaaatagatcatctattgaagga 50888356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 52094039 - 52094137
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattg 98  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||| |||| || | | |||||||||| | ||||||||||    
T  52094039 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaattaagttagatcaaaattgcaaattttcaaatgagtcatctattg 52094137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 2643215 - 2643332
Alignment:
Q  2 catcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgta 100  Q
    |||||||||||| ||||||||| ||  |||||||||||||||||| | ||||| ||   |||||||| || | | |||||||||||  ||||||||||      
T  2643215 catcttatatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcg 2643314  T
Q  101 ggaaggagggagtaataa 118  Q
    ||| ||||||||||||||    
T  2643315 ggacggagggagtaataa 2643332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18013415 - 18013468
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| |||||||    
T  18013415 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaa 18013468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36179081 - 36179134
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| |||||||    
T  36179081 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaa 36179134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 36364710 - 36364775
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | |||||||| ||||||||||    
T  36364710 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaaataagttaggtcaa 36364775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47340029 - 47340082
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| |||||||    
T  47340029 acatcttatatgatattatttatctttatatattagtagaaaaatatgatcaaa 47340082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 53055570 - 53055683
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa-taatcatctattgt 99  Q
    |||||||| |||| ||||||||||||  |||||||||||||||||| | |||||||  |||||||||| ||   | ||||||||| |  |||| ||||||    
T  53055570 acatcttaaatgatattatttatctttgtatattagtagaaaaatatggtcaaaattagttaggtcaaaattacacattttcaaattggtcatttattgt 53055669  T
Q  100 aggaaggagggagt 113  Q
    |||| |||||||||    
T  53055670 aggacggagggagt 53055683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 4945798 - 4945910
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtag 101  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | ||||| || |||||||||| || | | ||| |||||||  |||||||| || |    
T  4945798 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcaaattctcaaatacgtcatctatggtgg 4945897  T
Q  102 gaaggagggagta 114  Q
    || ||||||||||    
T  4945898 gacggagggagta 4945910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 36594363 - 36594431
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtag-aaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  ||||||| ||| ||||||| |||||||||| ||||||||||    
T  36594363 acatcttatatgatattatttatctttatatattaatagaaaaaatatgatcaaaataagttaggtcaa 36594431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 46866457 - 46866373
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    ||||||| |||||||||| || | | |||||||||    
T  46866457 acatcttatatgatattatttatctttgtatattagtagaaaaatattgccaaaataagttaggtcaaaattgcacattttcaaa 46866373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 47069506 - 47069406
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgtaggaaggagggagt 113  Q
    ||||||||||||  ||||| |||||||||||||  ||||| || |||||||||| || ||| ||||||||||   ||||||||||| ||| |||||||||    
T  47069506 attatttatctttgtatatcagtagaaaaatacagtcaaagtaggttaggtcaaaattgaaaattttcaaatgtgtcatctattgtgggacggagggagt 47069407  T
Q  114 a 114  Q
    |    
T  47069406 a 47069406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 50673791 - 50673707
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||| ||||| || | | |||||||||    
T  50673791 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaattgcacattttcaaa 50673707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 29809457 - 29809342
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtag 101  Q
    ||||||||||||||||||||||||  ||||||| |||||||||| | || || || | ||| |||| || | | |||||||||||  ||||||||||  |    
T  29809457 atcttatatgacattatttatctttgtatattaatagaaaaatatggtcgaagtaagctagatcaaaattgcaaattttcaaataggtcatctattgcgg 29809358  T
Q  102 gaaggagggagtaata 117  Q
    || |||||||||||||    
T  29809357 gacggagggagtaata 29809342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 32961356 - 32961293
Alignment:
Q  5 cttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  32961356 cttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagttaggtcaa 32961293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 35717969 - 35717854
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    |||||||| || | ||||||||||||  |  ||||||||||||||| | ||||||||||||| |||||||  | ||||| |||||||  ||||||||||     
T  35717969 acatcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaaatacgtcatctattga 35717870  T
Q  100 aggaaggagggagtaa 115  Q
    |||| |||||| ||||    
T  35717869 aggacggagggtgtaa 35717854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4464995 - 4464881
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| |||||||||||   || ||||||||||||||| ||||||| ||   ||||| || || | | ||||||||||| |||||||||||     
T  4464995 acatcttatatgatattatttatctatgtacattagtagaaaaatatgatcaaagtaaactaggttaacattgcaaattttcaaatagatcatctattgc 4464896  T
Q  100 aggaaggagggagta 114  Q
     ||| ||||||||||    
T  4464895 gggacggagggagta 4464881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43370405 - 43370319
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||| | | ||||||||||||  |||||||||| ||||||||||||||| || |||| ||||| || | | |||||||||||    
T  43370405 acatcttatgtaatattatttatctttgtatattagtataaaaatacgatcaaagtaagttatgtcaaaattgcacattttcaaata 43370319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43394503 - 43394565
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttag 63  Q
    ||||||||||||| ||||||||||||  | |||||||||||||||| | |||||||| |||||    
T  43394503 acatcttatatgatattatttatctttgtttattagtagaaaaatatggtcaaaataagttag 43394565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 26759591 - 26759526
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | ||||| || ||||||||||    
T  26759591 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 26759526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42247226 - 42247157
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||||| || ||||||||||||  ||| |||||||||||||| | ||||||||| ||| |||||||    
T  42247226 acatcttataagatattatttatctttatattttagtagaaaaatatggtcaaaatatattacgtcaata 42247157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 48143910 - 48143979
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||| |||| ||||||||||||  || ||||||||||||||| | ||||||||| ||| |||||||    
T  48143910 acatcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatattatgtcaata 48143979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48690200 - 48690245
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  48690200 acatcttatatgatattatttatctttgtatattagtagaaaaata 48690245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 935140 - 935076
Alignment:
Q  6 ttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||| ||||||||||||  | |||||||||||||||| | || ||| ||||||||||||||    
T  935140 ttatatgatattatttatctttatttattagtagaaaaatatggtcgaaacatgttaggtcaata 935076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 1778473 - 1778357
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtag 101  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | ||||| || | || ||||| || | | |||||||||||  ||||||||||  |    
T  1778473 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaagtcaaaattgcaaattttcaaataggtcatctattgcgg 1778374  T
Q  102 gaaggagggagtaataa 118  Q
    || ||||| ||||||||    
T  1778373 gacggaggaagtaataa 1778357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5030104 - 5029988
Alignment:
Q  1 acatcttatatgaca-ttatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattg 98  Q
    ||||||||||||| | |||||||||||  ||||||||||||||| |||| ||||| ||| ||| |||||||  | | ||||| |||||  ||||||||||    
T  5030104 acatcttatatgataattatttatctttgtatattagtagaaaagtacggtcaaagtatattaagtcaataatgcacatttttaaataggtcatctattg 5030005  T
Q  99 taggaa-ggagggagta 114  Q
    ||| || ||||||||||    
T  5030004 tagaaacggagggagta 5029988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20144867 - 20144922
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaat 56  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| |||||||    
T  20144867 acatcttatatgatgttatttatctttatatattagttgaaaaatacggtcaaaat 20144922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 21490018 - 21489963
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||  ||||||| || ||||||||| ||||| |||||||||||||||    
T  21490018 attatttatctttgtatattaataaaaaaatacggtcaaagtatgttaggtcaata 21489963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 45093897 - 45093936
Alignment:
Q  32 attagtagaaaaatacgatcaaaatatgttaggtcaatat 71  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  45093897 attagtagaaaaatatgatcaaaatatgttaagtcaatat 45093936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 1325498 - 1325556
Alignment:
Q  7 tatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggt 65  Q
    ||||||| ||||||||||||  ||||||||||||||||||  |||||| || |||||||    
T  1325498 tatatgatattatttatctttatatattagtagaaaaatataatcaaagtaagttaggt 1325556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15503170 - 15503268
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattg 98  Q
    |||||||| || | ||||||| |||| ||| ||||||||||||||| ||||||| ||| ||| |||||||  | ||||| |||| || |||||||||||    
T  15503170 acatcttacataatattatttttctttttaaattagtagaaaaataagatcaaagtatattaagtcaataatgtatattatcaactagatcatctattg 15503268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 32951250 - 32951136
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||| | ||||| ||| ||| |||||||  | ||||| |||| || ||||| |||||     
T  32951250 acatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactagatcatttattga 32951151  T
Q  100 aggaaggagggagta 114  Q
     ||| ||||||||||    
T  32951150 gggacggagggagta 32951136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35322346 - 35322416
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattag-tagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||| ||||||||||||  |||||||| || ||||||| | ||||||| | |||||||||||    
T  35322346 acatcttatatgatattatttatctttgtatattagttaaaaaaatatggtcaaaatttattaggtcaata 35322416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18971496 - 18971541
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||| ||  ||||||||||||||||||    
T  18971496 acatcttatatgatattatttatttttatatattagtagaaaaata 18971541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31787194 - 31787134
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtta 62  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||   ||||| ||||||||    
T  31787194 acatcttatatgatattatttatctt-tgatattagtagaaaaatctaatcaatatatgtta 31787134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 38833924 - 38833977
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  38833924 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 38833977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54673925 - 54673978
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||| |||||||    
T  54673925 acatcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaa 54673978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 20081009 - 20080942
Alignment:
Q  2 catcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||||||| ||||||||||||  ||||||||||  ||||||   ||||| |||||||||||||||    
T  20081009 catcttatatgatattatttatctttatatattagta-taaaatatagtcaaagtatgttaggtcaata 20080942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 49818869 - 49818773
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattg 98  Q
    |||| |||||| |||||||||||   |||||||||||||||||| | ||||| ||  ||||||||| || | | |||||||| | ||||||||||||    
T  49818869 atctaatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcaaattttcaactaaatcatctattg 49818773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 7314309 - 7314414
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtaggaaggagggagt 113  Q
    ||||||||||||  |||||||||||||||||| | ||||| |||||||||||||||  | | ||| ||||||| |||||||||||||||| |||||||||    
T  7314309 attatttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaatagtgcaaattctcaaatagatcatctattgtaggacggagggagt 7314408  T
Q  114 aataat 119  Q
    | ||||    
T  7314409 actaat 7314414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 23734282 - 23734169
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatg-ttaggtcaatatggaatattttcaaat-aatcatctattgta 100  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||   |||||||||| ||| |||||||  | |||||||||||| ||||||||||| ||    
T  23734282 atcttatatgatattatttatcttcgtatattagtagaaaaatatagtcaaaatatgtttaagtcaatagtgcatattttcaaataaatcatctattata 23734183  T
Q  101 ggaaggagggagta 114  Q
    | | ||| ||||||    
T  23734182 gaacggaaggagta 23734169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7461006 - 7461093
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataa 88  Q
    ||||||||||||| |||||||||||| ||||||||||  ||||||||  ||||||||| |||  ||||||  ||||||||||||||||    
T  7461006 acatcttatatgatattatttatctttttatattagtgaaaaaatacagtcaaaatatattatatcaataatgaatattttcaaataa 7461093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40348554 - 40348621
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||||||||| |||||||    
T  40348554 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaa 40348621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36404876 - 36404962
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||| | ||||||||||||  ||||||||||||||||||| ||||||||| ||||| |||| || | | |||||||||||    
T  36404876 acatcttatataatattatttatctttctatattagtagaaaaatacaatcaaaatacgttagatcaaaattgcacattttcaaata 36404962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 31496595 - 31496680
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||||| ||||| || |||||||||| || | | ||||||||||    
T  31496595 acatcttatatgatattatttatctttgtatattaatagaaaaatacggtcaaagtaagttaggtcaaaattgtacattttcaaat 31496680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16807096 - 16807180
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  16807096 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 16807180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26190315 - 26190367
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaa 53  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  26190315 acatcttatatgaaattatttatctttgtatattagtagaaaaatacgatcaa 26190367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38069165 - 38069081
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  38069165 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 38069081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 40232042 - 40231958
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||||||  ||||||||| || | | |||||||||    
T  40232042 acatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaaataaattaggtcaaaattgcacattttcaaa 40231958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9173286 - 9173353
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  9173286 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 9173353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 28016229 - 28016144
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||| |||| || | | ||||||||||    
T  28016229 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaat 28016144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 42493622 - 42493517
Alignment:
Q  10 atgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtaggaaggag 108  Q
    |||| ||||||||||||  |||||||||||||||||| | ||||| ||||||||||||||   | | ||| |||||||  ||||||||||| ||| ||||    
T  42493622 atgatattatttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaatcgcgcacattgtcaaataggtcatctattgtgggacggag 42493523  T
Q  109 ggagta 114  Q
    ||||||    
T  42493522 ggagta 42493517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5887954 - 5887894
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtt 61  Q
    ||||||||||||| || |||| ||||  |||||||||||||||||| ||||||||||||||    
T  5887954 acatcttatatgatatcatttgtctttgtatattagtagaaaaatatgatcaaaatatgtt 5887894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33376889 - 33376822
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||| ||||  ||||||| |||||||||||| ||||| || ||||||||||    
T  33376889 acatcttatatgatattatttttctttgtatattaatagaaaaatacggtcaaagtaagttaggtcaa 33376822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 38850816 - 38850749
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  ||||||||| |||||||| | ||||| || ||||||||||    
T  38850816 acatcttatatgatattatttatctttgtatattagtggaaaaatatggtcaaagtaagttaggtcaa 38850749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 47713384 - 47713467
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||| ||||||||||||  |||||||| | ||||||||| ||||| || |||||||||| || | | ||||||||||    
T  47713384 atcttatatgatattatttatctttgtatattagcaaaaaaatacggtcaaagtaagttaggtcaaaattgcacattttcaaat 47713467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25273967 - 25274081
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||| | ||||||||||||  ||||||||||||||| || | ||||| || |||||||||| || | | ||||||||| | ||||| |||||     
T  25273967 acatcttatataatattatttatctttgtatattagtagaaaattatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgc 25274066  T
Q  100 aggaaggagggagta 114  Q
    |||| ||| ||||||    
T  25274067 aggacggatggagta 25274081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 30462171 - 30462285
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| | ||||| || |||| ||||| || | | ||||||||| | ||||| |||||     
T  30462171 acatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtaagttaagtcaaaattgcacattttcaaacagatcatttattgc 30462270  T
Q  100 aggaaggagggagta 114  Q
     ||| ||||||||||    
T  30462271 gggacggagggagta 30462285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37100976 - 37101090
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||| ||||  ||||||| |||||||||| | ||||| || |||||||||| ||   | |||||||||||  ||||||||||     
T  37100976 acatcttatatgatattatttttctttgtatattaatagaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaataggtcatctattgc 37101075  T
Q  100 aggaaggagggagta 114  Q
     ||| ||||||||||    
T  37101076 gggacggagggagta 37101090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 44389400 - 44389302
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattg 98  Q
    |||||||| |||| ||||||||| ||  |  |||||||||||||||  |||||||||||||| |||||||  | ||||| ||||||| |||||||||||    
T  44389400 acatcttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaaatagatcatctattg 44389302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3680462 - 3680393
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||| ||||||||| ||  |||||||||| ||||||| | ||||||||||| | |||||||    
T  3680462 acatcttatatgatattatttatatttgtatattagtataaaaataaggtcaaaatatgtcaagtcaata 3680393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5842231 - 5842178
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| |||||||    
T  5842231 acatcttatatgatattatttatctttatatattagtataaaaatatgatcaaa 5842178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9821233 - 9821286
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| |||||||    
T  9821233 acatcttatatgatattatttatctttatatattagtaaaaaaatatgatcaaa 9821286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10723158 - 10723211
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| |||||||    
T  10723158 acatcttatatgatattatttatctttatatattagtaaaaaaatatgatcaaa 10723211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26651159 - 26651204
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  26651159 acatcttatatgatattatttatctttgtatattagtagaaaaata 26651204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32222664 - 32222615
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgat 50  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||||||||||    
T  32222664 acatcttatatgatattatttatctttgtatattaatagaaaaatacgat 32222615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35265771 - 35265816
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  35265771 acatcttatatgatattatttatctttgtatattagtagaaaaata 35265816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38198628 - 38198673
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  38198628 acatcttatatgatattatttatctttgtatattagtagaaaaata 38198673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38353548 - 38353593
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  38353548 acatcttatatgatattatttatctttgtatattagtagaaaaata 38353593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 27248797 - 27248865
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatat 71  Q
    ||||||||||| |||| |||| ||  |||||||||||||||||  ||||||| |||||||| |||||||    
T  27248797 atcttatatgatattaattatttttgtatattagtagaaaaatctgatcaaagtatgttagttcaatat 27248865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 35693780 - 35693864
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||| ||  |||||||||||||||||| | || || || |||||||||| || | | |||||||||    
T  35693780 acatcttatatgatattatttatttttgtatattagtagaaaaatatggtcgaagtaagttaggtcaaaattgcacattttcaaa 35693864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4033435 - 4033502
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| | ||||||||||||  |||||||||| ||||||||| ||||| || || |||||||    
T  4033435 acatcttatataatattatttatctttgtatattagtataaaaatacggtcaaagtacgtcaggtcaa 4033502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29247741 - 29247674
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||  ||||||||| ||||| |  ||||||||||    
T  29247741 acatcttatatgatattatttatctttgtatattagttaaaaaatacggtcaaagtcagttaggtcaa 29247674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 38498764 - 38498823
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgt 60  Q
    ||||||||| ||| ||||||||| ||  |||||||||||||||||| | |||||||||||    
T  38498764 acatcttatttgatattatttatttttgtatattagtagaaaaatatggtcaaaatatgt 38498823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41007906 - 41008020
Alignment:
Q  1 acatcttatatgacattatttatcttct-tatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattg 98  Q
    ||||||||||||| ||||||||| | || |||||||||||||||||| | ||||| || |||||||||| ||   ||||||| |||| | ||||||||||    
T  41007906 acatcttatatgatattatttat-tgctgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattacatatttttaaatgagtcatctattg 41008004  T
Q  99 taggaaggagggagta 114  Q
    |  || ||||||||||    
T  41008005 tgagatggagggagta 41008020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48448632 - 48448565
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  ||||||||| |||||||| | | ||| || ||||||||||    
T  48448632 acatcttatatgatattatttatctttgtatattagtggaaaaatatggttaaagtaagttaggtcaa 48448565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4088786 - 4088832
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatac 47  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||||    
T  4088786 acatcttatatgatattatttatctttgtatattaatagaaaaatac 4088832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23348470 - 23348400
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatat 71  Q
    |||| ||||||||  |||||||||||  |||||||||| ||||||| | ||||| |||||||| |||||||    
T  23348470 acattttatatgatgttatttatctttgtatattagtaaaaaaatatggtcaaagtatgttagttcaatat 23348400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39982231 - 39982161
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatat 71  Q
    ||||||||  ||| || |||||||||  ||||||||||||||||| |  |||||||||| |||||||||||    
T  39982231 acatcttacgtgatataatttatctttgtatattagtagaaaaatgcagtcaaaatatgctaggtcaatat 39982161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10464229 - 10464160
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||| | ||||| ||| ||| |||||||    
T  10464229 acatcttatatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatattaagtcaata 10464160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18795254 - 18795185
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||| |||| ||||||||||||  |  ||||||||||||||| | ||||| ||||||| |||||||    
T  18795254 acatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaata 18795185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 19327427 - 19327374
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaat 56  Q
    ||||||||||| |||||||||||   | |||||||||||||||| |||||||||    
T  19327427 atcttatatgatattatttatctatgtttattagtagaaaaatatgatcaaaat 19327374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40818647 - 40818744
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctatt 97  Q
    ||||||| ||| | ||||||||||||  |||||||||||||||||| | ||| | || ||||| |||| || | | ||||||||||| ||||||||||    
T  40818647 acatcttctataagattatttatctttgtatattagtagaaaaatatggtcagagtaagttagatcaaaattgcacattttcaaatagatcatctatt 40818744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9022954 - 9022838
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||| ||  |||||||||||||||||| | ||||| ||||||||||||| || | ||||||||||| |  |||| |||||     
T  9022954 acatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaaaattgcatattttcaaacaggtcatttattgc 9022855  T
Q  100 aggaaggagggagtaat 116  Q
    |||| ||||||||||||    
T  9022854 aggacggagggagtaat 9022838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2141682 - 2141598
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| || |||||||||| || | | |||||||||    
T  2141682 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgtacattttcaaa 2141598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6142461 - 6142545
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| || |||||||||| || | | |||||||||    
T  6142461 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 6142545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29514980 - 29515064
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| || |||||||||| || | | |||||||||    
T  29514980 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 29515064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 31709005 - 31708893
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtag 101  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||| ||||| ||  ||| ||||| || | | ||||| ||||| ||||||||||| ||    
T  31709005 atcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaagtaaattaagtcaaaattgcacatttttaaatagatcatctattgcag 31708906  T
Q  102 gaaggagggagta 114  Q
    || ||||||||||    
T  31708905 gacggagggagta 31708893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16661556 - 16661623
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||| ||||| || ||||||||||    
T  16661556 acatcttatatgatattatttatctttatatattagtagaaaaatacggtcaaagtaagttaggtcaa 16661623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24798500 - 24798618
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | ||||||||| |  |||| |||||     
T  24798500 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgc 24798599  T
Q  100 aggaaggagggagtaataa 118  Q
     ||| ||||||||||||||    
T  24798600 gggacggagggagtaataa 24798618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4890080 - 4890196
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgt 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| ||  ||||||||| || | | ||||| ||||  |||||||||||     
T  4890080 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcacatttttaaatggatcatctattgc 4890179  T
Q  100 aggaaggagggagtaat 116  Q
    | || ||||||||||||    
T  4890180 atgacggagggagtaat 4890196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 17417668 - 17417752
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||| ||| |||||| |||||| || | ||||| |||||    
T  17417668 acatcttatatgatattatttatctttgtatattagtagaaaaatatgattaaattatgtttggtcaaaattgcatattgtcaaa 17417752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 24825279 - 24825195
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  24825279 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 24825195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 32541431 - 32541515
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| ||  ||||||||| || | |||||||||||    
T  32541431 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcatattttcaaa 32541515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30699375 - 30699308
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  30699375 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaa 30699308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16120828 - 16120889
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtta 62  Q
    |||| |||||||| ||||||||||||  |||||||||| ||||||||| |||||||||||||    
T  16120828 acattttatatgatattatttatctttgtatattagtaaaaaaatacggtcaaaatatgtta 16120889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24693252 - 24693195
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatat 58  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | |||||||||    
T  24693252 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaatat 24693195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2397884 - 2397800
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| ||  ||||||||| || | | |||||||||    
T  2397884 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaa 2397800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2656624 - 2656708
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||   ||||| || |||||||||| || | | |||||||||    
T  2656624 acatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaa 2656708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6188610 - 6188694
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| | ||||| || |||||||||| || | | |||||||||    
T  6188610 acatcttatatgatattatttatctttatatattagtaaaaaaatatgctcaaagtaagttaggtcaaaattgcacattttcaaa 6188694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10105925 - 10105858
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | | |||||| |||| |||||    
T  10105925 acatcttatatgatattatttatctttatatattagtagaaaaatatggttaaaataagttaagtcaa 10105858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 2667279 - 2667393
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  | ||||||||||||||||   ||||| || |||||||||| || | | ||||||||| | ||||| |||||     
T  2667279 acatcttatatgatattatttatctttgtttattagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgc 2667378  T
Q  100 aggaaggagggagta 114  Q
     ||| ||||||||||    
T  2667379 gggacggagggagta 2667393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 995677 - 995632
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  995677 acatcttatatgatattatttatctttgtatattagtagaaaaata 995632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17179352 - 17179447
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataa-tcatctatt 97  Q
    ||||||||||| | ||||||||||||  ||||||||||| |||||||  ||||||||||||  |||||||  | |||||||||||||| |||||||||    
T  17179352 acatcttatataatattatttatctttgtatattagtag-aaaatacagtcaaaatatgtt-tgtcaatagtgtatattttcaaataagtcatctatt 17179447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 17496281 - 17496386
Alignment:
Q  10 atgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtaggaaggag 108  Q
    |||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | ||||||||| | ||||| |||||  ||| ||||    
T  17496281 atgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggag 17496380  T
Q  109 ggagta 114  Q
    ||||||    
T  17496381 ggagta 17496386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32673862 - 32673765
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctatt 97  Q
    ||||||||||||| ||||||| |||   |||||||||||||||||| | |||||||| ||||| |||| || | | ||||| ||||| ||||||||||    
T  32673862 acatcttatatgatattatttctctatgtatattagtagaaaaatatggtcaaaataagttagatcaaaattgcaaatttttaaatagatcatctatt 32673765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2913011 - 2912944
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| ||||| |  ||||||||||    
T  2913011 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaa 2912944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12869368 - 12869427
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgt 60  Q
    |||| |||||||| ||||||||||||  |||||||||||||||||| | ||||| |||||    
T  12869368 acattttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactatgt 12869427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29795564 - 29795451
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||| | | ||| || ||||| |||| || | | ||||||||| | ||||| |||||     
T  29795564 acatcttatatgatattatttatctt-taatattagtagaaaaatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgc 29795466  T
Q  100 aggaaggagggagta 114  Q
     ||| ||||||||||    
T  29795465 gggacggagggagta 29795451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 3686951 - 3686992
Alignment:
Q  29 tatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  3686951 tatattaatagaaaaatatgatcaaagtatgttaggtcaata 3686992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28483151 - 28483107
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||    
T  28483151 acatcttatatgatattatttatctt-taatattagtagaaaaata 28483107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 2555351 - 2555295
Alignment:
Q  6 ttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtta 62  Q
    |||||| | |||||||||||| |||||||||||  |||||||  |||||||||||||    
T  2555351 ttatataatattatttatctttttatattagtaagaaaatacagtcaaaatatgtta 2555295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 8048704 - 8048819
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtag 101  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | |||||||| | |||||||| || | | |||||||||||  |||||||||| ||    
T  8048704 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaaataagctaggtcaaaattgcaaattttcaaataggtcatctattgcag 8048803  T
Q  102 gaaggagggagtaata 117  Q
    || |||||||||||||    
T  8048804 gacggagggagtaata 8048819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2612029 - 2612098
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||| |||||| | |||||||||||| ||||||||||| ||||||||  |||||||||||||||||||||    
T  2612029 acattttatattatattatttatctttttatattagtaaaaaaatacagtcaaaatatgttaggtcaata 2612098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27462852 - 27462746
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  ||||||||||||| | |||| |  ||||||||||||||||||  | |||||||||||||  |||||||| ||    
T  27462852 acatcttatatgatattatttatcttggtatattagtagaatattacggt--aaatatgttaggtcaatagtgcatattttcaaataggtcatctatcgt 27462755  T
Q  100 aggaaggag 108  Q
    |||| ||||    
T  27462754 aggacggag 27462746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 48312138 - 48312045
Alignment:
Q  5 cttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataatcatctattg 98  Q
    ||||||| | ||||||||||||  ||||||||||||||||||||||||||||| |||| | ||| || | | ||||||||||  ||||||||||    
T  48312138 cttatataatattatttatctttgtatattagtagaaaaatacgatcaaaataagttaagccaaaattgcacattttcaaatggtcatctattg 48312045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 10100467 - 10100551
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  10100467 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 10100551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 52749395 - 52749331
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggt 65  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | |||||||| |||||||    
T  52749395 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggt 52749331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2138983 - 2139046
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttagg 64  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| || ||||||    
T  2138983 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttagg 2139046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38737492 - 38737377
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    |||||||| |||| | | ||||||||  ||||||||||||||||||| ||||||  |||||| ||||||||   | ||| ||||||| ||||||||||||    
T  38737492 acatcttacatgataatgtttatctttatatattagtagaaaaatacaatcaaagaatgttaagtcaatattatacattgtcaaatagatcatctattgt 38737393  T
Q  100 aggaaggagggagtaa 115  Q
     ||| |||||||||||    
T  38737392 gggacggagggagtaa 38737377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43453119 - 43453186
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||| | |||||||| ||||||||||    
T  43453119 acatcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaa 43453186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44741457 - 44741390
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | |||||||| ||||| ||||    
T  44741457 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttagatcaa 44741390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 48897031 - 48896964
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||| ||||||||| ||  |||||||||||||||||| | ||||||||| |||||||||||    
T  48897031 atcttatatgatattatttatgtttatatattagtagaaaaatatggtcaaaatattttaggtcaata 48896964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 49903639 - 49903706
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| ||  |||||||||    
T  49903639 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaaattaggtcaa 49903706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51924924 - 51924994
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaa-tacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||| ||||||||||||  |||||| ||| ||||| |||| |||||||||||||||||||||    
T  51924924 acatcttatatgatattatttatctttgtatattggtaaaaaaaatacggtcaaaatatgttaggtcaata 51924994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1821582 - 1821699
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgt 99  Q
    ||||||||||||| ||||||||||||  ||||||| | |||||||| | ||||| || |||||||||| || | | |||||||||||   |||||||||     
T  1821582 acatcttatatgatattatttatctttgtatattaatggaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaataggccatctattgc 1821681  T
Q  100 aggaaggagggagtaata 117  Q
     ||| |||||||||||||    
T  1821682 cggacggagggagtaata 1821699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 23337919 - 23337854
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||||||||    
T  23337919 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagttaggtcaa 23337854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 31932133 - 31932246
Alignment:
Q  2 catcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgta 100  Q
    |||||||||||| ||||||||| ||  |||||||||||||||||| | ||||| ||   |||||||| || | | ||||||||||| |||||||||||      
T  31932133 catcttatatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaaactaggtcaaaattgcaaattttcaaatagatcatctattgcg 31932232  T
Q  101 ggaaggagggagta 114  Q
    ||| ||||||||||    
T  31932233 ggacggagggagta 31932246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31971501 - 31971440
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtta 62  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||| |||||||||||||||    
T  31971501 acatcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaaatatgtta 31971440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38786900 - 38786985
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||| ||||||||||||  ||||||||| |||||||| ||||||| || ||||  |||| || | ||||||||||||    
T  38786900 acatcttatatgatattatttatctttgtatattagttgaaaaatatgatcaaagtaagttatatcaaaattgcatattttcaaat 38786985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6017403 - 6017487
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||| |||| || | | |||||||||    
T  6017403 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaa 6017487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 10124223 - 10124139
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||| | ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  10124223 acatcttatataatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 10124139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 26543982 - 26543898
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||| | ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  26543982 acatcttatataatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgtacattttcaaa 26543898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 32968227 - 32968143
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||||  ||||||||||| || |||| || | ||||| |||||    
T  32968227 acatcttatatgatattatttatctttgtatattagtataaaaatacagtcaaaatatgtcagttcaaaattgtatattgtcaaa 32968143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 45299432 - 45299348
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||| | ||||| || |||||||||| || | | |||||||||    
T  45299432 acatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 45299348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 52688645 - 52688546
Alignment:
Q  1 acatcttatatgacattatttatcttcttatat--tagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataatcatctattg 98  Q
    ||||||||||||| ||||||||||||  |||||  ||||||||||||||  ||||| || |||||||||| ||   | |||||||||| |||||||||||    
T  52688645 acatcttatatgatattatttatctttgtatattatagtagaaaaatacagtcaaagtaagttaggtcaaaattccacattttcaaatgatcatctattg 52688546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7075284 - 7075351
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || ||||| ||||    
T  7075284 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaa 7075351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 44963626 - 44963693
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    |||||||||||||  |||||||||||  ||||||||| |||||||||| |||||||  ||||||||||    
T  44963626 acatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaaatcagttaggtcaa 44963693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32495191 - 32495253
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttag 63  Q
    ||||||| ||||| ||||||||||||  ||||||||| |||||||| | ||||||||||||||    
T  32495191 acatcttttatgatattatttatctttgtatattagtcgaaaaatatggtcaaaatatgttag 32495253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5606345 - 5606390
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  5606345 acatcttatatgatattatttatctttgtatattagtagaaaaata 5606390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5945879 - 5945834
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  5945879 acatcttatatgatattatttatctttgtatattagtagaaaaata 5945834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 27581039 - 27581120
Alignment:
Q  17 tatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctatt 97  Q
    ||||||||||  ||||||| |||||||||| ||||||| ||||||||||||| ||   ||||| |||||| |||||||||||    
T  27581039 tatttatctttgtatattattagaaaaatatgatcaaagtatgttaggtcaaaattacatattgtcaaataaatcatctatt 27581120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27990829 - 27990760
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||| ||||  |||||||| ||  |||||||||||||||||| | ||||| |||||||||||||||    
T  27990829 acatcttacatgatgttatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaata 27990760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31651855 - 31651900
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  31651855 acatcttatatgatattatttatctttgtatattagtagaaaaata 31651900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36035800 - 36035747
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaa 54  Q
    |||| |||||||| ||||||||||||  |||||||||||||||||| |||||||    
T  36035800 acattttatatgatattatttatctttgtatattagtagaaaaatatgatcaaa 36035747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 47912392 - 47912339
Alignment:
Q  4 tcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaata 57  Q
    |||||||||| ||||||||||||  |||||||||||||||||| | ||||||||    
T  47912392 tcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaata 47912339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 41414311 - 41414203
Alignment:
Q  7 tatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtaggaag 105  Q
    ||||||| |||||||||||   |||||||||||||||||| | ||||| || | |||||||| || | | |||||||||||  | |||||||| |||| |    
T  41414311 tatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtaatctattgcaggacg 41414212  T
Q  106 gagggagta 114  Q
    |||||||||    
T  41414211 gagggagta 41414203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 41855677 - 41855761
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | ||||| || | |||||||| || | | |||||||||||    
T  41855677 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaata 41855761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 48389178 - 48389094
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata 87  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | ||||| || | |||||||| || | | |||||||||||    
T  48389178 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaata 48389094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 50014515 - 50014611
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaataa-tcatctat 96  Q
    ||||||||||||| |||||||||||   |||||||||||||||||| | ||||| || | ||| |||| || | | |||||||||||| ||||||||    
T  50014515 acatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctagatcaaaattgcaaattttcaaataagtcatctat 50014611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44452309 - 44452242
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| |||||| |||||  ||| |||||||||||||| | ||||| || ||||||||||    
T  44452309 acatcttatatgatattattcatctttgtatgttagtagaaaaatatggtcaaagtaagttaggtcaa 44452242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50295890 - 50295957
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||| ||||||||| |  |||| ||||| |||||||    
T  50295890 acatcttatatgatattatttatctttgtatattagcagaaaaatatgggcaaagtatgtcaggtcaa 50295957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40058921 - 40058990
Alignment:
Q  1 acatcttatatgacattatttatcttcttata--ttagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  ||||  |||||||||||||||| ||||| || ||||| ||||    
T  40058921 acatcttatatgatattatttatctttgtatatattagtagaaaaatacggtcaaagtaagttagatcaa 40058990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3277633 - 3277678
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||| | ||||||||||||  ||||||||||||||||||    
T  3277633 acatcttatattatattatttatctttatatattagtagaaaaata 3277678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3529323 - 3529392
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    |||||||| |||| ||||||||||||  |  ||||||||||||||| | ||||| ||||||| |||||||    
T  3529323 acatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatgttaagtcaata 3529392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3555318 - 3555273
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    |||||||||| || ||||||||||||  ||||||||||||||||||    
T  3555318 acatcttataagatattatttatctttgtatattagtagaaaaata 3555273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4489175 - 4489130
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||    
T  4489175 acatcttatatgatattatttatctgtgtatattagtagaaaaata 4489130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26441781 - 26441850
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaata 70  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||| | ||||| ||| ||| |||||||    
T  26441781 acatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaata 26441850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33526116 - 33526161
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||| ||  ||||||||||||||||||    
T  33526116 acatcttatatgaaattatttatttttgtatattagtagaaaaata 33526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38644223 - 38644162
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgtta 62  Q
    ||||||||||||  || |||||||||  |||| || |||||||||| |||||||||||||||    
T  38644223 acatcttatatgctatcatttatctttatataataatagaaaaatatgatcaaaatatgtta 38644162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 40883523 - 40883458
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| | ||||||| ||  ||||||||| |||||||| ||||||| || ||||||||||    
T  40883523 atcttatatgatactatttatatttgtatattagttgaaaaatatgatcaaagtaagttaggtcaa 40883458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 44240631 - 44240566
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | ||||| || | ||||||||    
T  44240631 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaa 44240566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 15443412 - 15443456
Alignment:
Q  18 atttatcttcttatattagtagaaaaatacgatcaaaatatgtta 62  Q
    |||||||||  |||||||||||||||||| |||||||| ||||||    
T  15443412 atttatctttatatattagtagaaaaatatgatcaaaacatgtta 15443456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 625 - 710
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | ||||||||||||    
T  625 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagttaggtcaaaattgcatattttcaaat 710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1103 - 1036
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||||| ||||||||||| |||||||    
T  1103 acatcttatatgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaa 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5490 - 5406
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  5490 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 5406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 184080 - 183996
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaa 85  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| | ||||| || |||||||||| || | | |||||||||    
T  184080 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 183996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 4551 - 4441
Alignment:
Q  5 cttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat-aatcatctattgtagga 103  Q
    ||||||| | ||||||||||||   ||||||||||||||||||| |||||||| |||||||||| || | | ||||| |||| |||||| ||||| ||||    
T  4551 cttatataatattatttatctttgcatattagtagaaaaatacggtcaaaataagttaggtcaaaattgcacatttttaaatgaatcatttattgcagga 4452  T
Q  104 aggagggagta 114  Q
     ||| ||||||    
T  4451 cggaaggagta 4441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 23915 - 23984
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaat 86  Q
    ||||||||||||  |||||||||||||||||||||||||| || |||||||||| || | | ||||||||||    
T  23915 attatttatctt--tatattagtagaaaaatacgatcaaagtaagttaggtcaaaattgcacattttcaaat 23984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 24164 - 24264
Alignment:
Q  15 attatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaatatggaatattttcaaata-atcatctattgtaggaaggagggagt 113  Q
    ||||| ||||||  |||||||||||||||||||| ||||||||||||| |||||||  | | ||||| |||||  ||||||||| || || |||||||||    
T  24164 attatctatctttgtatattagtagaaaaatacggtcaaaatatgttaagtcaatagtgcacatttttaaataggtcatctattataagacggagggagt 24263  T
Q  114 a 114  Q
    |    
T  24264 a 24264  T

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Target: scaffold0283 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3109 - 3064
Alignment:
Q  1 acatcttatatgacattatttatcttcttatattagtagaaaaata 46  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||||||    
T  3109 acatcttatatgatattatttatcttagtatattaatagaaaaata 3064  T

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Target: scaffold0281 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 13216 - 13151
Alignment:
Q  3 atcttatatgacattatttatcttcttatattagtagaaaaatacgatcaaaatatgttaggtcaa 68  Q
    ||||||||||| |||||||||||   |||||||||||||||||| | ||||| || | ||||||||    
T  13216 atcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaa 13151  T

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